ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3n19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 1100 bits (555), Expect = 0.0 Identities = 585/590 (99%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 1 cgtagtattagcataattn-ccccaaaatacaacgacaatatctgtaggtaaaagctgcg 59 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1738 cgtagtattagcataattcaccccaaaatacaacgacaatatctgtaggtaaa-gctgcg 1680 Query: 60 ggtccgccatggctgagcagctacacaattaacaacacacgtcgatcaacaccaacgcac 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1679 ggtccgccatggctgagcagctacacaattaacaacacacgtcgatcaacaccaacgcac 1620 Query: 120 gaacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgcacgaacggattaagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 gaacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgcacgaacggattaagc 1560 Query: 180 gtcttatttttggatgtactttggaagcctcctcctctcctccacggtggcacggacgat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1559 gtcttatttttggatgtactttggaagcctcctcctctcctccacggtggcacggacgat 1500 Query: 240 ccttcagacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1499 ccttcagacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggg 1440 Query: 300 gtcgatgagcttgttctggctgatgccgaggaagacccttggtgcattcctcgccggggg 359 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1439 gtcgatgagcttgttctggctgatgccgaggaaga-ccttggtgcattcctcgccggggg 1381 Query: 360 acagcagcttctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtac 419 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1380 acagcagcttctcgccggtgaggtacacgcagccgagctcctcgcggacg-aagcggtac 1322 Query: 420 agcgggaacgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 agcgggaacgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaag 1262 Query: 480 gccacgcgggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 gccacgcgggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttg 1202 Query: 540 ttgatcttggagaacaccgtggcctcgctctcggcctcgccggggccggc 589 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ttgatcttggagaacaccgtggcctcgctctcggcctcgccggggccggc 1152
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 385 bits (194), Expect = e-103 Identities = 302/334 (90%), Gaps = 3/334 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 2045 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||| ||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 2044 cttgccctggctgatgccgatgaacacc-ttgttgcactcctcgccgggggacttgagct 1986 Query: 369 tctcgccggtgaggtacacgcagccgagctcc-tcgcggacgaaagcggtacagcgggaa 427 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1985 tctcgccggtgaggtacacgcagccgagctccctcgcggacgaa-gcggtacacggggaa 1927 Query: 428 cgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcg 487 ||||| ||||||||||||| |||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1926 cgaccggctctccttgatccggttggcgatcggcgcggtgccgttctccacggccacgcg 1867 Query: 488 ggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatctt 547 |||||||||||||||||| ||||| ||||| |||||||||||| |||||||| ||||||| Sbjct: 1866 ggcggcctcgatctcccggggcagagccgagcgcagctcctccccgaacttggtgatctt 1807 Query: 548 ggagaacaccgtggcctcgctctcggcctcgccg 581 ||||||||| | || ||| | |||||| |||||| Sbjct: 1806 ggagaacacggagggctcccgctcggcgtcgccg 1773
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2189 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2130 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 2129 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 2071 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 2070 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 2012 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 2011 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 1952 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 1951 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 1892 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 1891 gagaacacggaggcctcgggctcggcgtcgccg 1859
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Plus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24992256 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 24992315 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 24992316 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 24992374 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 24992375 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 24992433 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 24992434 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 24992493 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 24992494 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 24992553 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 24992554 gagaacacggaggcctcgggctcggcgtcgccg 24992586 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 25004175 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 25004234 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 25004235 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 25004293 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 25004294 gccgttctcgacggcggcgcgggcggcctc 25004323 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 25025228 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 25025284 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagca 295 ||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 25011629 gatgggcaggggcgcgccgttccactccttgagacactcaagca 25011672 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcg 405 ||||||||||| ||| || ||||||||||||||||||| || |||||||||||||| Sbjct: 25011723 tcctcgccgggcgaccgcgtcttctcgccggtgaggtacgcggttccgagctcctcgcg 25011781 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 25004085 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 25004141 Score = 44.1 bits (22), Expect = 0.51 Identities = 116/146 (79%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 392 ccgagctcctcgcggacgaaagcggtacagcgggaacgacctgctctccttgatcaggtt 451 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | | Sbjct: 25025363 ccgagctcctcgcgcacgaac-cggtagagcggatacgacctgcactcggtgattctgct 25025421 Query: 452 ggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcag 511 ||| || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 25025422 gggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcag 25025481 Query: 512 ggccgaccgcagctcctcctcgaact 537 | || ||||||||||||||||||| Sbjct: 25025482 agtcgcgcgcagctcctcctcgaact 25025507
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Plus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5244 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 5303 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 5304 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 5362 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 5363 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 5421 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 5422 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 5481 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 5482 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 5541 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 5542 gagaacacggaggcctcgggctcggcgtcgccg 5574 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 17163 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 17222 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 17223 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 17281 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 17282 gccgttctcgacggcggcgcgggcggcctc 17311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 38216 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 38272 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagca 295 ||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 24617 gatgggcaggggcgcgccgttccactccttgagacactcaagca 24660 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcg 405 ||||||||||| ||| || ||||||||||||||||||| || |||||||||||||| Sbjct: 24711 tcctcgccgggcgaccgcgtcttctcgccggtgaggtacgcggttccgagctcctcgcg 24769 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 17073 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 17129 Score = 44.1 bits (22), Expect = 0.51 Identities = 116/146 (79%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 392 ccgagctcctcgcggacgaaagcggtacagcgggaacgacctgctctccttgatcaggtt 451 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | | Sbjct: 38351 ccgagctcctcgcgcacgaac-cggtagagcggatacgacctgcactcggtgattctgct 38409 Query: 452 ggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcag 511 ||| || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 38410 gggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcag 38469 Query: 512 ggccgaccgcagctcctcctcgaact 537 | || ||||||||||||||||||| Sbjct: 38470 agtcgcgcgcagctcctcctcgaact 38495
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Plus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 153539 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 153598 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 153599 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 153657 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 153658 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 153716 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 153717 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 153776 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 153777 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 153836 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 153837 gagaacacggaggcctcgggctcggcgtcgccg 153869 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 165458 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 165517 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 165518 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 165576 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 165577 gccgttctcgacggcggcgcgggcggcctc 165606 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 165368 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 165424
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2191 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2132 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 2131 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 2073 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 2072 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 2014 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 2013 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 1954 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 1953 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 1894 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 1893 gagaacacggaggcctcgggctcggcgtcgccg 1861
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 335 bits (169), Expect = 1e-88 Identities = 294/333 (88%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 983 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 924 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| Sbjct: 923 cttgccctggctgatgccgaggaacacc-ttgttgcactcctcgccgggggacttgagct 865 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 864 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 806 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 805 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 746 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 745 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 686 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 685 gagaacacggaggcctcgggctcggcgtcgccg 653
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 327 bits (165), Expect = 2e-86 Identities = 293/333 (87%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1218 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 1159 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| ||| ||| |||| ||| ||||||||||| |||| Sbjct: 1158 cttgccctggctgatgccgaggaacacc-ttgttgcactccccgccgggggacttgagct 1100 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1099 tctcgccggtgaggaatacgcagccgagctcctcgcggacgaa-gcggtagagcgggaac 1041 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||| Sbjct: 1040 gaccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgg 981 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 980 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 921 Query: 549 gagaacaccgtggcctcgctctcggcctcgccg 581 |||||||| | ||||||| |||||| |||||| Sbjct: 920 gagaacacggaggcctcgggctcggcgtcgccg 888
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 313 bits (158), Expect = 4e-82 Identities = 281/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4066 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 4007 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||||||| | ||||| |||| ||||||||||||||| |||| Sbjct: 4006 cttgccctggctgatgccgaggaaca-ccttgttgcactcctcgccgggggacttgagct 3948 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 3947 tctcgccggtgaggaatacgcagccgagctcctcgcggacg-aagcggtagagcgggaac 3889 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| |||||| |||| |||||| || ||| || ||| |||| ||| ||| |||||| Sbjct: 3888 gaccggctctcgacgatccggttggcgacgggggcggtg-cgttggcgacggcgacgcgg 3830 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 ||||||||||||||||| ||||| || || || |||||||||||||||||| |||||||| Sbjct: 3829 gcggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttg 3770 Query: 549 gagaacaccgtggcctcg 566 |||||||| | ||||||| Sbjct: 3769 gagaacacggaggcctcg 3752
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2118 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2059 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 2058 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 2000 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1999 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 1941 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 1940 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 1881 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 1880 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 1821 Query: 552 aacac 556 ||||| Sbjct: 1820 aacac 1816
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2010 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 1951 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 1950 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 1892 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1891 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 1833 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 1832 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 1773 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 1772 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 1713 Query: 552 aacac 556 ||||| Sbjct: 1712 aacac 1708
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 98032 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 98091 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 98092 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 98150 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 98151 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 98209 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 98210 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 98269 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 98270 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 98329 Query: 552 aacac 556 ||||| Sbjct: 98330 aacac 98334 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 118218 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 118277 Query: 312 g 312 | Sbjct: 118278 g 118278
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 25880622 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 25880681 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 25880682 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 25880740 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 25880741 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 25880799 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 25880800 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 25880859 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 25880860 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 25880919 Query: 552 aacac 556 ||||| Sbjct: 25880920 aacac 25880924 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 25900808 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 25900867 Query: 312 g 312 | Sbjct: 25900868 g 25900868
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2210 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2151 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 2150 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 2092 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2091 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 2033 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 2032 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 1973 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 1972 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 1913 Query: 552 aacac 556 ||||| Sbjct: 1912 aacac 1908
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 311 bits (157), Expect = 1e-81 Identities = 270/305 (88%), Gaps = 2/305 (0%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6884 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 6943 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||||| | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 6944 gcgctcgctgatggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 7002 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 7003 ctccggtgaggtacacgcagccgagctcctcgcggacgaa-gcggtacagcgggaacgac 7061 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 ||||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || Sbjct: 7062 ctgctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgcc 7121 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 7122 gcctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggag 7181 Query: 552 aacac 556 ||||| Sbjct: 7182 aacac 7186 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 27070 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 27129 Query: 312 g 312 | Sbjct: 27130 g 27130
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 272 bits (137), Expect = 1e-69 Identities = 265/305 (86%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1968 gatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcgatgagctt 1909 Query: 312 gttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttct 371 | || ||||| | | ||||| ||| ||| |||| ||||||||||||||| ||||||| Sbjct: 1908 gccctcgctgagggccaggaacacc-ttgttgcactcctcgccgggggacttgagcttct 1850 Query: 372 cgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaacgac 431 ||||||| ||||||||| |||||| |||| ||||| ||| ||||||||||||| ||||| Sbjct: 1849 cgccggtcaggtacacggcgccgaggtcctggcggatgaa-gcggtacagcgggtacgac 1791 Query: 432 ctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcg 491 | ||||||||||||| ||||| ||| ||||| | |||| |||||||||||||||||||| Sbjct: 1790 cggctctccttgatcctgttggcgatcggcgcggcgccggtctcgaaggccacgcgggcg 1731 Query: 492 gcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggag 551 ||||| ||||||| ||||| ||| |||||||||||||||||| |||||||||||||| Sbjct: 1730 gcctccatctccctgggcagcgcctcgcgcagctcctcctcgaacctgttgatcttggag 1671 Query: 552 aacac 556 ||||| Sbjct: 1670 aacac 1666
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 220 bits (111), Expect = 4e-54 Identities = 263/311 (84%), Gaps = 2/311 (0%) Strand = Plus / Minus Query: 246 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 305 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 2215 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 2156 Query: 306 gagcttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagca 365 ||||||| |||||||||||||| ||| | ||||| |||| ||||||||||||||| | Sbjct: 2155 gagcttgccctggctgatgccgacgaaca-ccttgttgcactcctcgccgggggacttga 2097 Query: 366 gcttctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcggg 425 || |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2096 gcctctcgccggtcaggaacacgcagccgagctcctcgcgcacg-aagcggtacagcggg 2038 Query: 426 aacgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacg 485 ||||||| ||| ||| |||| |||| | | ||| || ||||| | ||| |||||| Sbjct: 2037 aacgaccggctgtccgcgatccggttcgccacgggggcggtgccctcggcgaccgccacg 1978 Query: 486 cgggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatc 545 ||||||||||| | |||| | ||||| ||| || ||||||||||||||| || ||||| Sbjct: 1977 cgggcggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatc 1918 Query: 546 ttggagaacac 556 ||||||||||| Sbjct: 1917 ttggagaacac 1907
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 206 bits (104), Expect = 6e-50 Identities = 260/308 (84%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 249 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 308 |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2216 gttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacgag 2157 Query: 309 cttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagct 368 |||| |||||||||||||| ||| | ||||| |||| ||||||||||||||| ||| Sbjct: 2156 cttgccctggctgatgccgacgaaca-ccttgttgcactcctcgccgggggacttgagcc 2098 Query: 369 tctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcgggaac 428 |||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2097 tctcgccggtcaggaacacgcagccgagctcctcgcgcacg-aagcggtacagcgggaac 2039 Query: 429 gacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgg 488 |||| ||| ||| |||| |||| | | ||| || ||||| | || | ||||||||| Sbjct: 2038 gaccggctgtccgcgatccggttcgccacgggggcggtgccctcggcg-acgccacgcgg 1980 Query: 489 gcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttg 548 |||||||| | |||| | ||||| ||| || ||||||||||||||| || |||||||| Sbjct: 1979 gcggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatcttg 1920 Query: 549 gagaacac 556 |||||||| Sbjct: 1919 gagaacac 1912
>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds Length = 190 Score = 188 bits (95), Expect = 1e-44 Identities = 163/183 (89%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 246 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 305 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 181 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 122 Query: 306 gagcttgttctggctgatgccgaggaagacccttggtgcattcctcgccgggggacagca 365 ||||||| |||||||||||||| ||| | ||||| |||| ||||||||||||||| | Sbjct: 121 gagcttgccctggctgatgccgacgaaca-ccttgttgcactcctcgccgggggacttga 63 Query: 366 gcttctcgccggtgaggtacacgcagccgagctcctcgcggacgaaagcggtacagcggg 425 || |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 62 gcctctcgccggtcaggaacacgcagccgagctcctcgcgcacg-aagcggtacagcggg 4 Query: 426 aac 428 ||| Sbjct: 3 aac 1
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 2206 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 2147 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 2146 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 2088 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 2087 gccgttctcgacggcggcgcgggcggcctc 2058 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 2240
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 2206 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 2147 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 2146 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 2088 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 2087 gccgttctcgacggcggcgcgggcggcctc 2058 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 2240
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 1447 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 1388 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 1387 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 1329 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 1328 gccgttctcgacggcggcgcgggcggcctc 1299 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 1537 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 1481
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 99.6 bits (50), Expect = 1e-17 Identities = 126/150 (84%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 1163 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 1104 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||||| ||||| |||||| |||| | || |||||||||| ||||||||| | ||| || Sbjct: 1103 acgaac-cggtagagcgggtacgagcggcactccttgatccggttggggacgagcggggt 1045 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 1044 gccgttctcgacggcggcgcgggcggcctc 1015 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 1253 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 1197
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2167 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2111 Score = 44.1 bits (22), Expect = 0.51 Identities = 116/146 (79%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 392 ccgagctcctcgcggacgaaagcggtacagcgggaacgacctgctctccttgatcaggtt 451 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | | Sbjct: 2032 ccgagctcctcgcgcacgaac-cggtagagcggatacgacctgcactcggtgattctgct 1974 Query: 452 ggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcag 511 ||| || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1973 gggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcag 1914 Query: 512 ggccgaccgcagctcctcctcgaact 537 | || ||||||||||||||||||| Sbjct: 1913 agtcgcgcgcagctcctcctcgaact 1888
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 4566 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 4510
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2166 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2110 Score = 44.1 bits (22), Expect = 0.51 Identities = 116/146 (79%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 392 ccgagctcctcgcggacgaaagcggtacagcgggaacgacctgctctccttgatcaggtt 451 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | | Sbjct: 2031 ccgagctcctcgcgcacgaac-cggtagagcggatacgacctgcactcggtgattctgct 1973 Query: 452 ggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcag 511 ||| || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1972 gggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcag 1913 Query: 512 ggccgaccgcagctcctcctcgaact 537 | || ||||||||||||||||||| Sbjct: 1912 agtcgcgcgcagctcctcctcgaact 1887
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 87.7 bits (44), Expect = 4e-14 Identities = 129/156 (82%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 315 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 2141 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 2082 Query: 316 tggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttctcgcc 375 ||| |||| ||| | || ||||| || ||||||||||| ||| || ||||||||| Sbjct: 2081 tggttgatcgcgacg-agcaccttgttgagctcctcgccgggcgaccgcgtcttctcgcc 2023 Query: 376 ggtgaggtacacgcagccgagctcctcgcggacgaa 411 ||||||||| || ||||||||||||||| ||||| Sbjct: 2022 ggtgaggtaggcggtgccgagctcctcgcgcacgaa 1987
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 87.7 bits (44), Expect = 4e-14 Identities = 129/156 (82%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 315 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 122631 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 122690 Query: 316 tggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttctcgcc 375 ||| |||| ||| | || ||||| || ||||||||||| ||| || ||||||||| Sbjct: 122691 tggttgatcgcgacg-agcaccttgttgagctcctcgccgggcgaccgcgtcttctcgcc 122749 Query: 376 ggtgaggtacacgcagccgagctcctcgcggacgaa 411 ||||||||| || ||||||||||||||| ||||| Sbjct: 122750 ggtgaggtaggcggtgccgagctcctcgcgcacgaa 122785
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 87.7 bits (44), Expect = 4e-14 Identities = 129/156 (82%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 315 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 65212 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 65271 Query: 316 tggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttctcgcc 375 ||| |||| ||| | || ||||| || ||||||||||| ||| || ||||||||| Sbjct: 65272 tggttgatcgcgacg-agcaccttgttgagctcctcgccgggcgaccgcgtcttctcgcc 65330 Query: 376 ggtgaggtacacgcagccgagctcctcgcggacgaa 411 ||||||||| || ||||||||||||||| ||||| Sbjct: 65331 ggtgaggtaggcggtgccgagctcctcgcgcacgaa 65366
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 4e-14 Identities = 129/156 (82%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 315 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 20809407 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 20809466 Query: 316 tggctgatgccgaggaagacccttggtgcattcctcgccgggggacagcagcttctcgcc 375 ||| |||| ||| | || ||||| || ||||||||||| ||| || ||||||||| Sbjct: 20809467 tggttgatcgcgacg-agcaccttgttgagctcctcgccgggcgaccgcgtcttctcgcc 20809525 Query: 376 ggtgaggtacacgcagccgagctcctcgcggacgaa 411 ||||||||| || ||||||||||||||| ||||| Sbjct: 20809526 ggtgaggtaggcggtgccgagctcctcgcgcacgaa 20809561 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 7843191 aaaatacaacgacaatatct 7843172
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 83.8 bits (42), Expect = 6e-13 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcgg 406 ||||||||||| ||| || ||||||||||||||||||| || ||||| ||||||||| Sbjct: 4635 tcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgc 4576 Query: 407 acgaaagcggtacagcgggaacgacctgctctccttgatcaggttggggatgggcgccgt 466 ||| || ||||| |||||| |||| | || |||||||||| |||| |||| | ||| || Sbjct: 4575 acg-aaccggtagagcgggtacgagcggcactccttgatccggtt-gggacgagcggggt 4518 Query: 467 gccgttctcgaaggccacgcgggcggcctc 496 ||||||||||| ||| ||||||||||||| Sbjct: 4517 gccgttctcgacggcggcgcgggcggcctc 4488 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| Sbjct: 4725 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 4669
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2139 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2080 Query: 312 g 312 | Sbjct: 2079 g 2079
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 1060
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16320140 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16320199 Query: 312 g 312 | Sbjct: 16320200 g 16320200 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 20335822 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 20335778
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttg 1569
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2264 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2205 Query: 312 g 312 | Sbjct: 2204 g 2204
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 1506
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16273373 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16273432 Query: 312 g 312 | Sbjct: 16273433 g 16273433 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 20262036 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 20261992
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 67191 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 67250 Query: 312 g 312 | Sbjct: 67251 g 67251
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 311 ||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| |||| Sbjct: 2133 gatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgctt 2074 Query: 312 gttctggctgatgccgagga 331 | |||| ||||| |||||| Sbjct: 2073 gccctggttgatggcgagga 2054
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||| Sbjct: 3097 ggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttg 3041
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagca 295 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1011 ggcaggggctcgccgttccactccttgaggcactcaagca 972
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 252 gatgggcaggggctcgccgttccactccttgaggcactcgagca 295 ||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 2136 gatgggcaggggcgcgccgttccactccttgagacactcaagca 2093 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 347 tcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcg 405 ||||||||||| ||| || ||||||||||||||||||| || |||||||||||||| Sbjct: 2042 tcctcgccgggcgaccgcgtcttctcgccggtgaggtacgcggttccgagctcctcgcg 1984
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 259 aggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 |||||||||||||||||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttg 323
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 312 ||||| |||||||| ||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttg 990
>ref|XM_310523.2| Anopheles gambiae str. PEST ENSANGP00000017298 (ENSANGG00000014809), partial mRNA Length = 1971 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 514 ccgaccgcagctcctcctcgaacttgtt 541 |||||||||||| ||||||||||||||| Sbjct: 367 ccgaccgcagcttctcctcgaacttgtt 340
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 256 ggcaggggctcgccgttccactccttgaggcactc 290 ||||||||||| || ||||||||||| |||||||| Sbjct: 1420 ggcaggggctcaccattccactccttcaggcactc 1386
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 110514 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 110470
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 ctcgctctcggcctcgccggg 583 ||||||||||||||||||||| Sbjct: 1787845 ctcgctctcggcctcgccggg 1787825
>ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LOC677558 (LOC677558), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 951 atttttggatgtactttggaa 971
>ref|XR_004983.1| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC676880), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 1582 atttttggatgtactttggaa 1602
>ref|XM_112266.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC195555), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>ref|XM_205435.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC279185), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>ref|XM_746694.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g10390) partial mRNA Length = 2004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 tcctcctcgaacttgttgatc 545 ||||||||||||||||||||| Sbjct: 1031 tcctcctcgaacttgttgatc 1011
>ref|XM_647174.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (125.t00007) partial mRNA Length = 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 acttgttgatcttggagaaca 555 ||||||||||||||||||||| Sbjct: 123 acttgttgatcttggagaaca 143
>emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chromosome 11 Contains part of the gene for a novel protein (C230094A16Rik), the gene for a novel protein (4931440F15Rik) similar to Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), a ribosomal protein L23 (Rpl23) pseudogene, a preferentially expressed antigen in melanoma like 5 (Pramel5) pseudogene and a CpG island, complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 174370 atttttggatgtactttggaa 174390
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 acagcgggaacgacctgctct 438 ||||||||||||||||||||| Sbjct: 1761401 acagcgggaacgacctgctct 1761381
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 ttccactccttgaggcactcgagcatggg 299 ||||||||||||||||| || |||||||| Sbjct: 2185 ttccactccttgaggcattcaagcatggg 2157
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 28380582 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 28380538
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggaagcctcctcctctcctcc 222 ||||||||||||||||||||| Sbjct: 7993897 ggaagcctcctcctctcctcc 7993917
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggaagcctcctcctctcctcc 222 ||||||||||||||||||||| Sbjct: 106540 ggaagcctcctcctctcctcc 106560
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggaagcctcctcctctcctcc 222 ||||||||||||||||||||| Sbjct: 9002 ggaagcctcctcctctcctcc 9022
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 actttggaagcctcctcctct 217 ||||||||||||||||||||| Sbjct: 44602 actttggaagcctcctcctct 44582
>gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, partial cds Length = 1110 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 ttccactccttgaggcactcgagcatggg 299 ||||||||||| | ||||||||||||||| Sbjct: 864 ttccactccttcaagcactcgagcatggg 836
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 28363031 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 28362987
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 367 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaa 411 |||||||||||| |||||| || ||||||||||| ||| ||||| Sbjct: 175879 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaa 175923
>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete sequence Length = 185594 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 42223 atttttggatgtactttggaa 42243
>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete sequence Length = 172962 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 147699 atttttggatgtactttggaa 147719 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 atttttggatgtactttggaa 205 ||||||||||||||||||||| Sbjct: 36754 atttttggatgtactttggaa 36774
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 cgcgggcggcctcgatctcc 503 |||||||||||||||||||| Sbjct: 86711 cgcgggcggcctcgatctcc 86730
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 120777 aaaatacaacgacaatatct 120758
>ref|XM_423398.1| PREDICTED: Gallus gallus similar to cingulin (LOC425665), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ccgcagctcctcctcgaact 537 |||||||||||||||||||| Sbjct: 1902 ccgcagctcctcctcgaact 1883
>ref|XM_363465.1| Magnaporthe grisea 70-15 hypothetical protein (MG01391.4) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 agccgagctcctcgcggacg 409 |||||||||||||||||||| Sbjct: 436 agccgagctcctcgcggacg 417
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 gcattcctcgccgggggacagcag 366 |||| ||||||||||||||||||| Sbjct: 1008707 gcatacctcgccgggggacagcag 1008730
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 27966 aaaatacaacgacaatatct 27947
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 tcgaaggccacgcgggcggc 493 |||||||||||||||||||| Sbjct: 2786407 tcgaaggccacgcgggcggc 2786426
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 cgaaggccacgcgggcggcctcgatctc 502 ||||||||| |||| ||||||||||||| Sbjct: 4080463 cgaaggccatgcggtcggcctcgatctc 4080490
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cgcgggcggcctcgatctcc 503 |||||||||||||||||||| Sbjct: 30973 cgcgggcggcctcgatctcc 30954
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 taagcgtcttatttttggat 194 |||||||||||||||||||| Sbjct: 198253 taagcgtcttatttttggat 198234
>ref|NM_174427.2| Bos taurus polymerase (DNA directed), delta 1, catalytic subunit 125kDa (POLD1), mRNA Length = 3451 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 cagggccgaccgcagctcctcctc 532 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 gcagctcctcctcgaacttg 539 |||||||||||||||||||| Sbjct: 5055 gcagctcctcctcgaacttg 5036
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tcggcctcgccggggccggc 589 |||||||||||||||||||| Sbjct: 1967615 tcggcctcgccggggccggc 1967634
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ctcggcctcgccggggccgg 588 |||||||||||||||||||| Sbjct: 1166534 ctcggcctcgccggggccgg 1166515
>gb|AY850327.1| Magnaporthe grisea cytochrome P450-like protein mRNA, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 agccgagctcctcgcggacg 409 |||||||||||||||||||| Sbjct: 484 agccgagctcctcgcggacg 465
>dbj|AB240063.1| Streptomyces lavendulae subsp. lavendulae orfA, bpsA, bpsB, bpsC genes for Ribose-phosphate pyrophosphokinase, Blue-pigment synthetase, Putative pathway-specific transcriptional activator, S-adenosylmethionine synthetase, partial and complete cds Length = 5913 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tctcgaaggccacgcgggcg 491 |||||||||||||||||||| Sbjct: 4016 tctcgaaggccacgcgggcg 3997
>gb|M80395.1|BOVDPLDA Bovine DNA polymerase delta catalytic subunit mRNA, complete cds Length = 3451 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 cagggccgaccgcagctcctcctc 532 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,267,047 Number of Sequences: 3902068 Number of extensions: 4267047 Number of successful extensions: 94093 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92779 Number of HSP's gapped (non-prelim): 1255 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
