ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence 182 9e-43
2gb|AY103886.1| Zea mays PCO129988 mRNA sequence 159 1e-35
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 7e-19
5emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 103 7e-19
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
8emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 88 4e-14
9dbj|AK120247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
10gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, comple... 44 0.54
11gb|AF320302.1|AF320302 Lactobacillus delbrueckii subsp. bulgaric... 44 0.54
12gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 44 0.54
13gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 44 0.54
14gb|AC167331.3| Mus musculus chromosome 1, clone RP23-301L19, com... 42 2.1
15ref|XM_388289.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 42 2.1
16gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 42 2.1
17gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 42 2.1
18emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chr... 42 2.1
19gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.4
20gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.4
21gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.4
22ref|XM_676392.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.4
23gb|BC067327.1| Xenopus tropicalis nucleoporin 93kDa, mRNA (cDNA ... 40 8.4
24gb|BC045089.1| Xenopus laevis dead eye-like, mRNA (cDNA clone MG... 40 8.4
25gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cance... 40 8.4
26ref|XM_501424.1| Yarrowia lipolytica CLIB122, YALI0C04070g predi... 40 8.4
27emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chr... 40 8.4
28emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chr... 40 8.4
29ref|NM_213714.1| Xenopus tropicalis nucleoporin 93kDa (nup93), mRNA 40 8.4
30emb|AL589845.8| Mouse DNA sequence from clone RP23-246J2 on chro... 40 8.4
31gb|AC026223.11| Homo sapiens chromosome 10 clone RP11-548F5, com... 40 8.4
32dbj|AK141161.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 8.4
33dbj|AK052067.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 8.4
34gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.4
35emb|BX322622.10| Zebrafish DNA sequence from clone DKEYP-14D3 in... 40 8.4
36emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 i... 40 8.4
37dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.4
38gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.4
39gb|CP000225.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.4
40emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.4
41gb|U63919.1|XLU63919 Xenopus laevis An4a mRNA, complete cds 40 8.4 
>gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence
          Length = 727

 Score =  182 bits (92), Expect = 9e-43
 Identities = 197/232 (84%)
 Strand = Plus / Minus

                                                                       
Query: 380 aacttctctccgttgaccaggatgagagggatgtattgcaggaccaatcgtttgcactgt 439
           |||||||| ||||| |||| |||||| || ||||||||||| ||||  |  |||||||| 
Sbjct: 727 aacttctcaccgttcaccaagatgaggggaatgtattgcagaaccagcctcttgcactgc 668

                                                                       
Query: 440 tgctcgtgaccttcgatctttttgcactccttgagaagaatttgaattatctcaaactca 499
           ||  |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| 
Sbjct: 667 tggacgtgaccttcgatcttattgcactccttgacaagaatctgaattatctcaaactcc 608

                                                                       
Query: 500 gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
           ||||| |||||||||||||||||||  | |||||| |  || |||||||| ||||| || 
Sbjct: 607 gcatctggatctttcagtttggacatgatttcatcgagcagatggtggcagaacacacac 548

                                                               
Query: 560 gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
           ||||| ||||||| |||||| || ||||||||  |||||||||| |||||||
Sbjct: 547 gtgctgtcacttcccacaccggagagaagagccgtgtccctgcacaggccat 496
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>gb|AY103886.1| Zea mays PCO129988 mRNA sequence
          Length = 2158

 Score =  159 bits (80), Expect = 1e-35
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                       
Query: 444 cgtgaccttcgatctttttgcactccttgagaagaatttgaattatctcaaactcagcat 503
           |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 939 cgtgaccttcgatcttattgcactccttgacaagaatctgaattatctcaaactccgcat 880

                                                                       
Query: 504 caggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcatgtgc 563
           | |||||||||||||||||||  | |||||| |  || |||||||| ||||| || ||||
Sbjct: 879 ctggatctttcagtttggacatgatttcatcgagcagatggtggcagaacacacacgtgc 820

                                                           
Query: 564 tctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
           | ||||||| |||||| || ||||||||  |||||||||| |||||||
Sbjct: 819 tgtcacttcccacaccggagagaagagccgtgtccctgcacaggccat 772
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                          
Query: 500    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
              ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 629322 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 629263

                                                                  
Query: 560    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
              ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||
Sbjct: 629262 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccat 629211



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 364    atcgttcttctcgaggaacttctctccgtt 393
              |||||||||||| ||||||||||| |||||
Sbjct: 629667 atcgttcttctccaggaacttctcaccgtt 629638
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                          
Query: 500    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
              ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 629322 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 629263

                                                                  
Query: 560    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
              ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||
Sbjct: 629262 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccat 629211



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 364    atcgttcttctcgaggaacttctctccgtt 393
              |||||||||||| ||||||||||| |||||
Sbjct: 629667 atcgttcttctccaggaacttctcaccgtt 629638
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                         
Query: 500   gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
             ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 19521 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 19580

                                                                 
Query: 560   gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
             ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||
Sbjct: 19581 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccat 19632



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 364   atcgttcttctcgaggaacttctctccgtt 393
             |||||||||||| ||||||||||| |||||
Sbjct: 19176 atcgttcttctccaggaacttctcaccgtt 19205
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                          
Query: 500    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 593033 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 592974

                                                                  
Query: 560    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||
Sbjct: 592973 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccat 592922



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 364    atcgttcttctcgaggaacttctctccgttgaccag 399
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 593384 atcgttcttctccaggaacttctcaccgttcaccag 593349
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                          
Query: 500    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 593033 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 592974

                                                                  
Query: 560    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||
Sbjct: 592973 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccat 592922



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 364    atcgttcttctcgaggaacttctctccgttgaccag 399
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 593384 atcgttcttctccaggaacttctcaccgttcaccag 593349
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                          
Query: 500    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 559
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 149939 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 149998

                                                                  
Query: 560    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccat 611
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||
Sbjct: 149999 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccat 150050



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 364    atcgttcttctcgaggaacttctctccgttgaccag 399
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 149588 atcgttcttctccaggaacttctcaccgttcaccag 149623
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>dbj|AK120247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044M10, full
           insert sequence
          Length = 1025

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 364 atcgttcttctcgaggaacttctctccgttgaccag 399
           |||||||||||| ||||||||||| ||||| |||||
Sbjct: 741 atcgttcttctccaggaacttctcaccgttcaccag 706
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>gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, complete sequence
          Length = 168680

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 525   aaacttcatccatgaggtggtg 546
             ||||||||||||||||||||||
Sbjct: 25896 aaacttcatccatgaggtggtg 25917
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>gb|AF320302.1|AF320302 Lactobacillus delbrueckii subsp. bulgaricus nitroreductase NAD gene,
            complete cds
          Length = 1880

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 119  ttcatcataccgctccctttat 140
            ||||||||||||||||||||||
Sbjct: 1394 ttcatcataccgctccctttat 1373
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 119     ttcatcataccgctccctttat 140
               ||||||||||||||||||||||
Sbjct: 4279718 ttcatcataccgctccctttat 4279739
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 119     ttcatcataccgctccctttat 140
               ||||||||||||||||||||||
Sbjct: 4100546 ttcatcataccgctccctttat 4100567
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>gb|AC167331.3| Mus musculus chromosome 1, clone RP23-301L19, complete sequence
          Length = 197718

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 395    accaggatgagagggatgtat 415
              |||||||||||||||||||||
Sbjct: 124470 accaggatgagagggatgtat 124450
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>ref|XM_388289.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08113.1)
           partial mRNA
          Length = 5241

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 488 atctcaaactcagcatcagga 508
           |||||||||||||||||||||
Sbjct: 482 atctcaaactcagcatcagga 462
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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   atgcttgaacgatggtgcata 362
             |||||||||||||||||||||
Sbjct: 28569 atgcttgaacgatggtgcata 28589
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 494     aactcagcatcaggatctttc 514
               |||||||||||||||||||||
Sbjct: 2337109 aactcagcatcaggatctttc 2337089
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>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete
             sequence
          Length = 177126

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 342   atgcttgaacgatggtgcata 362
             |||||||||||||||||||||
Sbjct: 36475 atgcttgaacgatggtgcata 36455
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ttcatcataccgctcccttt 138
               ||||||||||||||||||||
Sbjct: 4141110 ttcatcataccgctcccttt 4141129
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ttcatcataccgctcccttt 138
               ||||||||||||||||||||
Sbjct: 4153283 ttcatcataccgctcccttt 4153302
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ttcatcataccgctcccttt 138
               ||||||||||||||||||||
Sbjct: 4153658 ttcatcataccgctcccttt 4153677
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>ref|XM_676392.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8215.2), mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  tcttctcgaggaacttctct 388
            ||||||||||||||||||||
Sbjct: 1933 tcttctcgaggaacttctct 1914
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>gb|BC067327.1| Xenopus tropicalis nucleoporin 93kDa, mRNA (cDNA clone MGC:76268
           IMAGE:5379233), complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 579 cagacagaagagcattgtcc 598
           ||||||||||||||||||||
Sbjct: 358 cagacagaagagcattgtcc 339
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>gb|BC045089.1| Xenopus laevis dead eye-like, mRNA (cDNA clone MGC:53870
           IMAGE:5543002), complete cds
          Length = 2639

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 579 cagacagaagagcattgtcc 598
           ||||||||||||||||||||
Sbjct: 403 cagacagaagagcattgtcc 384
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>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188300

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     cagtttgttcagataccatt 57
              ||||||||||||||||||||
Sbjct: 121743 cagtttgttcagataccatt 121724
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>ref|XM_501424.1| Yarrowia lipolytica CLIB122, YALI0C04070g predicted mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  cagagaatgcagcagcagca 173
            ||||||||||||||||||||
Sbjct: 1261 cagagaatgcagcagcagca 1280
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>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains
            the TLX1 gene for T-cell leukemia homeobox 1, the 5' end
            of a novel gene, the C10orf1 gene for chromosome 10 open
            reading frame 1 and four CpG islands, complete sequence
          Length = 51099

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  ctcagcatcaggatctttca 515
            ||||||||||||||||||||
Sbjct: 4541 ctcagcatcaggatctttca 4522
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>emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chromosome 10, complete
            sequence
          Length = 166118

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    tagcagacagactgaaactc 24
            ||||||||||||||||||||
Sbjct: 4292 tagcagacagactgaaactc 4311
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>ref|NM_213714.1| Xenopus tropicalis nucleoporin 93kDa (nup93), mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 579 cagacagaagagcattgtcc 598
           ||||||||||||||||||||
Sbjct: 358 cagacagaagagcattgtcc 339
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>emb|AL589845.8| Mouse DNA sequence from clone RP23-246J2 on chromosome 4, complete
              sequence
          Length = 175287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    agaatttgaattatctcaaa 495
              ||||||||||||||||||||
Sbjct: 169221 agaatttgaattatctcaaa 169240
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>gb|AC026223.11| Homo sapiens chromosome 10 clone RP11-548F5, complete sequence
          Length = 169131

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tagcagacagactgaaactc 24
             ||||||||||||||||||||
Sbjct: 68165 tagcagacagactgaaactc 68146
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>dbj|AK141161.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230078I24 product:hypothetical
            protein, full insert sequence
          Length = 4573

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cagtttgttcagataccatt 57
            ||||||||||||||||||||
Sbjct: 1060 cagtttgttcagataccatt 1041
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>dbj|AK052067.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230041D01 product:hypothetical protein,
            full insert sequence
          Length = 2679

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cagtttgttcagataccatt 57
            ||||||||||||||||||||
Sbjct: 1034 cagtttgttcagataccatt 1015
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 334     agcatcgcatgcttgaacga 353
               ||||||||||||||||||||
Sbjct: 3929501 agcatcgcatgcttgaacga 3929520
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>emb|BX322622.10| Zebrafish DNA sequence from clone DKEYP-14D3 in linkage group 8,
             complete sequence
          Length = 162365

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ttacaaattaaacactgacc 75
             ||||||||||||||||||||
Sbjct: 23893 ttacaaattaaacactgacc 23874
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>emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 in linkage group 8,
             complete sequence
          Length = 115792

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ttacaaattaaacactgacc 75
             ||||||||||||||||||||
Sbjct: 10979 ttacaaattaaacactgacc 10960
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>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2
          Length = 86854

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   cagagaatgcagcagcagca 173
             ||||||||||||||||||||
Sbjct: 67300 cagagaatgcagcagcagca 67319
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ttcatcataccgctcccttt 138
               ||||||||||||||||||||
Sbjct: 4153156 ttcatcataccgctcccttt 4153175
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>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aaattaaacactgaccaagt 79
              ||||||||||||||||||||
Sbjct: 201504 aaattaaacactgaccaagt 201485
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    cagagaatgcagcagcagca 173
              ||||||||||||||||||||
Sbjct: 536362 cagagaatgcagcagcagca 536343
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>gb|U63919.1|XLU63919 Xenopus laevis An4a mRNA, complete cds
          Length = 3112

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 579 cagacagaagagcattgtcc 598
           ||||||||||||||||||||
Sbjct: 409 cagacagaagagcattgtcc 390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,150,661
Number of Sequences: 3902068
Number of extensions: 6150661
Number of successful extensions: 148476
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147952
Number of HSP's gapped (non-prelim): 524
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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