ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3n06 |
|---|---|
| Clone Library Name | barley_pub |
>RKIN1_SECCE (Q02723) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 502 Score = 286 bits (731), Expect = 6e-77 Identities = 149/179 (83%), Positives = 154/179 (86%), Gaps = 3/179 (1%) Frame = -3 Query: 702 RATSGYLGADYQQSMGRSLNQFTSSESASPSTRQYLPGTNDSQGSGLRPYYPVERKWALG 523 RATSGYLGA YQQ M ESASPSTR YLPG+NDSQGSGLRPYY VERKWALG Sbjct: 334 RATSGYLGAHYQQPM----------ESASPSTRSYLPGSNDSQGSGLRPYYRVERKWALG 383 Query: 522 LQ-SRAHPREIMIEVLKALQELNVSWKKNGH-YNMKCRWCPGFPQVSDML-DANHSFVDD 352 LQ SRA PR IMIEVLKAL+ELNV WKKNG YNMKCRWCPGFP+VSDML DANHSFVDD Sbjct: 384 LQQSRAPPRAIMIEVLKALKELNVCWKKNGDCYNMKCRWCPGFPRVSDMLLDANHSFVDD 443 Query: 351 STIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQRLTGPQLLFLDFCAAFLTNLRVL 175 I DNGDAN RLPAVIKFEIQLYKTKDDKYLLDMQR+TGPQLLFL+FCAAFLTNLRVL Sbjct: 444 CAIKDNGDANSRLPAVIKFEIQLYKTKDDKYLLDMQRVTGPQLLFLEFCAAFLTNLRVL 502
>KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10| (EC 2.7.11.1) (AKIN10) (AKIN alpha2) Length = 535 Score = 211 bits (536), Expect = 2e-54 Identities = 109/179 (60%), Positives = 134/179 (74%), Gaps = 3/179 (1%) Frame = -3 Query: 702 RATSGYLGADYQQSMGRSLNQFTSSESASPSTRQYLPGTNDSQGSGLRPYYPVERKWALG 523 RA+SGYLGA++Q++M + + ASP + + LPG + QG GLR YPVERKWALG Sbjct: 359 RASSGYLGAEFQETMEGTPRMHPAESVASPVSHR-LPGLMEYQGVGLRSQYPVERKWALG 417 Query: 522 LQSRAHPREIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFP---QVSDMLDANHSFVDD 352 LQSRAHPREIM EVLKALQ+LNV WKK GHYNMKCRW P +S+ + N+ F D+ Sbjct: 418 LQSRAHPREIMTEVLKALQDLNVCWKKIGHYNMKCRWVPNSSADGMLSNSMHDNNYFGDE 477 Query: 351 STIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQRLTGPQLLFLDFCAAFLTNLRVL 175 S+I++N +A + P V+KFEIQLYKT+DDKYLLD+QR+ GPQ LFLD CAAFL LRVL Sbjct: 478 SSIIEN-EAAVKSPNVVKFEIQLYKTRDDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 535
>KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha subunit KIN11| (EC 2.7.11.1) (AKIN11) (AKIN alpha1) Length = 512 Score = 187 bits (476), Expect = 2e-47 Identities = 95/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = -3 Query: 702 RATSGYLGADYQQSMGRSLNQFTSSESASPSTRQYLPGTNDSQGSGLRPYYPVERKWALG 523 R SGYL +++Q++ N + E+ + ++P D G G R PV+RKWALG Sbjct: 337 RVPSGYLESEFQETTDSGSNPMRTPEAGASPVGHWIPAHVDHYGLGARSQVPVDRKWALG 396 Query: 522 LQSRAHPREIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFPQ-VSDMLDANHSFVDDST 346 LQS AHPREIM EVLKALQELNV WKK GHYNMKCRW PG + M++ F D+S+ Sbjct: 397 LQSHAHPREIMNEVLKALQELNVCWKKIGHYNMKCRWVPGLADGQNTMVNNQLHFRDESS 456 Query: 345 IMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQRLTGPQLLFLDFCAAFLTNLRVL 175 I+++ D P VIKFE+QLYK +++KYLLD+QR+ GPQ LFLD CAAFLT LRV+ Sbjct: 457 IIED-DCAMTSPTVIKFELQLYKAREEKYLLDIQRVNGPQFLFLDLCAAFLTELRVI 512
>AAPK2_CAEEL (Q95ZQ4) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMP-activated kinase 2) Length = 626 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/100 (27%), Positives = 43/100 (43%) Frame = -3 Query: 537 KWALGLQSRAHPREIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFPQVSDMLDANHSFV 358 KW LG++S++ P +IM EV +A+++L++ WK Y++ R P P Sbjct: 464 KWHLGIRSQSRPEDIMFEVFRAMKQLDMEWKVLNPYHVIVRRKPDAPAADPP-------- 515 Query: 357 DDSTIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQRL 238 K +QLY+ YLLD + L Sbjct: 516 -------------------KMSLQLYQVDQRSYLLDFKSL 536
>SNF1_CANGA (Q00372) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 612 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%) Frame = -3 Query: 537 KWALGLQSRAHPREIMIEVLKALQELNVSWKKNGH---YNMKCRWCPGFPQVSDMLDANH 367 +W G++SR++P ++M E+ AL+ L W K + ++ RW D+ Sbjct: 480 RWHFGIRSRSYPLDVMGEIYIALKNLGAEWAKPSEEDLWTIRVRW---------KYDS-- 528 Query: 366 SFVDDSTIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQ 244 D+S ++++G ++P ++K IQL++ + + YL+D + Sbjct: 529 ---DESRLIEDGVK--KIPNLMKIVIQLFQIETNNYLVDFK 564
>SNF1_YEAST (P06782) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 633 Score = 44.3 bits (103), Expect = 4e-04 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = -3 Query: 537 KWALGLQSRAHPREIMIEVLKALQELNVSWKKNGH---YNMKCRWCPGFPQVSDMLDANH 367 +W G++SR++P ++M E+ AL+ L W K + +K RW Sbjct: 504 RWHFGIRSRSYPLDVMGEIYIALKNLGAEWAKPSEEDLWTIKLRW--------------- 548 Query: 366 SFVDDSTIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQ 244 I + + N ++P ++K IQL++ + + YL+D + Sbjct: 549 ----KYDIGNKTNTNEKIPDLMKMVIQLFQIETNNYLVDFK 585
>AAPK2_RAT (Q09137) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/68 (32%), Positives = 38/68 (55%) Frame = -3 Query: 618 SPSTRQYLPGTNDSQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKN 439 SP R L N ++ L + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 377 SPKARCPLDALNTTKPKSLAVK---KAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVV 433 Query: 438 GHYNMKCR 415 Y+++ R Sbjct: 434 NAYHLRVR 441
>AAPK2_PONPY (Q5RD00) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/68 (32%), Positives = 38/68 (55%) Frame = -3 Query: 618 SPSTRQYLPGTNDSQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKN 439 SP R L N ++ L + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 377 SPKARCPLDALNTTKPKSLAVK---KAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVV 433 Query: 438 GHYNMKCR 415 Y+++ R Sbjct: 434 NAYHLRVR 441
>AAPK2_PIG (Q28948) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/68 (32%), Positives = 38/68 (55%) Frame = -3 Query: 618 SPSTRQYLPGTNDSQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKN 439 SP R L N ++ L + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 377 SPKARCPLDALNTTKPKSLAVK---KAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVV 433 Query: 438 GHYNMKCR 415 Y+++ R Sbjct: 434 NAYHLRVR 441
>AAPK2_HUMAN (P54646) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/68 (32%), Positives = 38/68 (55%) Frame = -3 Query: 618 SPSTRQYLPGTNDSQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKN 439 SP R L N ++ L + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 377 SPKARCPLDALNTTKPKSLAVK---KAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVV 433 Query: 438 GHYNMKCR 415 Y+++ R Sbjct: 434 NAYHLRVR 441
>SNF1_CANAL (P52497) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 620 Score = 41.6 bits (96), Expect = 0.002 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = -3 Query: 579 SQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKNGH---YNMKCRWC 409 SQ P + +W G++SR++P ++M E+ +AL+ L W K + ++ RW Sbjct: 473 SQQHAPPPTKKSKTRWHFGIRSRSYPLDVMGEIYRALKNLGAEWAKPTEEELWTIRVRW- 531 Query: 408 PGFPQVSDMLDANHSFVDDSTIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQ 244 D S + G A P ++K +IQL++ + + YL+ + Sbjct: 532 ---------------KYDTSAQFECGSA----PNLMKMQIQLFQLEPNNYLVSFK 567
>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = -3 Query: 618 SPSTRQYLPGTND--SQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWK 445 +P R L N S+ G+R + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 373 TPRARHTLDELNPQKSKHQGVR-----KAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWK 427 Query: 444 KNGHYNMKCR 415 Y ++ R Sbjct: 428 VVNPYYLRVR 437
>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = -3 Query: 618 SPSTRQYLPGTND--SQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWK 445 +P R L N S+ G+R + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 373 TPRARHTLDELNPQKSKHQGVR-----KAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWK 427 Query: 444 KNGHYNMKCR 415 Y ++ R Sbjct: 428 VVNPYYLRVR 437
>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = -3 Query: 618 SPSTRQYLPGTND--SQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWK 445 +P R L N S+ G+R + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 371 TPRARHTLDELNPQKSKHQGVR-----KAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWK 425 Query: 444 KNGHYNMKCR 415 Y ++ R Sbjct: 426 VVNPYYLRVR 435
>AAPK1_MOUSE (Q5EG47) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = -3 Query: 618 SPSTRQYLPGTND--SQGSGLRPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWK 445 +P R L N S+ G+R + KW LG++S++ P +IM EV +A+++L+ WK Sbjct: 371 TPRARHTLDELNPQKSKHQGVR-----KAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWK 425 Query: 444 KNGHYNMKCR 415 Y ++ R Sbjct: 426 VVNPYYLRVR 435
>SNF1_CANTR (O94168) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 619 Score = 40.0 bits (92), Expect = 0.007 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 4/110 (3%) Frame = -3 Query: 561 RPYYPVERKWALGLQSRAHPREIMIEVLKALQELNVSWKKNGH---YNMKCRW-CPGFPQ 394 +P ++ +W G++SR++P ++M E+ +AL+ L W K + ++ RW PQ Sbjct: 478 QPTKKLKTRWHFGIRSRSYPLDVMGEIYRALKNLGAEWAKPTEEELWTIRVRWKYDSTPQ 537 Query: 393 VSDMLDANHSFVDDSTIMDNGDANGRLPAVIKFEIQLYKTKDDKYLLDMQ 244 + N ++K +IQL++ + + YL+D + Sbjct: 538 LRVWQRTN---------------------LMKMQIQLFQLEPNNYLVDFK 566
>AHPF_PSEPU (P0A156) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-)| Length = 520 Score = 30.8 bits (68), Expect = 4.2 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -3 Query: 522 LQSRAHPREIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFPQVSDML-----DANHSFV 358 LQ HP + EV++ +Q L + ++++ C+ CP Q +++ + H + Sbjct: 94 LQVGGHPSKASAEVIEQIQALEGEFNFETYFSLSCQNCPDVVQALNLMAVLNPNVRHVAI 153 Query: 357 DDSTIMD 337 D + D Sbjct: 154 DGALFQD 160
>AHPF_PSEPK (P0A155) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-)| Length = 520 Score = 30.8 bits (68), Expect = 4.2 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -3 Query: 522 LQSRAHPREIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFPQVSDML-----DANHSFV 358 LQ HP + EV++ +Q L + ++++ C+ CP Q +++ + H + Sbjct: 94 LQVGGHPSKASAEVIEQIQALEGEFNFETYFSLSCQNCPDVVQALNLMAVLNPNVRHVAI 153 Query: 357 DDSTIMD 337 D + D Sbjct: 154 DGALFQD 160
>CDC23_YEAST (P16522) Anaphase-promoting complex subunit CDC23 (Cell division| control protein 23) Length = 626 Score = 30.8 bits (68), Expect = 4.2 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 15/118 (12%) Frame = -3 Query: 498 EIMIEVLKALQELNVSWKKNGHYNMKCRWCPGFPQVSDMLDANHSFVDDSTIMDNGDANG 319 +I I++ KA EL+ WK G G + D+ D HS D+S + + Sbjct: 12 DIRIQLRKAATELS-RWKLYGSSKWAAEALAGLAEAIDV-DQTHSLADESPLRNKQGVPK 69 Query: 318 RLPAVIKFEIQLYKTKDDKYLLD---------------MQRLTGPQLLFLDFCAAFLT 190 ++ + + L +T+ D YLL ++ +T P L FL + FL+ Sbjct: 70 QMFEIPQNGFGLSETEYDLYLLGSTLFDAKEFDRCVFFLKDVTNPYLKFLKLYSKFLS 127
>SYS_FUSNN (Q8RH11) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 421 Score = 30.4 bits (67), Expect = 5.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 330 DANGRLPAVIKFEIQLYKTKDDKYLLDMQRLT 235 + G+LP KFE +YKT DD YL+ +T Sbjct: 205 EGTGQLP---KFEEDMYKTTDDMYLISTSEIT 233
>K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297| Length = 1411 Score = 29.6 bits (65), Expect = 9.4 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -3 Query: 648 LNQFT--SSESASPSTRQYLPGTNDSQGSGLRP 556 LN T SS S +PS Q+LPGT +GS + P Sbjct: 645 LNSLTVPSSLSWAPSAEQWLPGTRADEGSPVEP 677 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,187,472 Number of Sequences: 219361 Number of extensions: 2248710 Number of successful extensions: 5463 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5454 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7082949625 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
