ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3n05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 83.8 bits (42), Expect = 4e-13 Identities = 119/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtg 331 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||| || || | Sbjct: 907 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtag-ttgggag 849 Query: 332 cgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgtttcagg 391 ||||| ||||| || || || ||| ||||| |||||||||||||||||||| |||| | Sbjct: 848 aaacctttgcgatatcgacgtt-gtttggagtaaccttttcttccataacctgcttcaag 790 Query: 392 atagatagagcaatggtttcag 413 ||||| || || ||||| |||| Sbjct: 789 atagacagggctatggtctcag 768
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 83.8 bits (42), Expect = 4e-13 Identities = 119/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtg 331 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||| || || | Sbjct: 802 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtag-ttgggag 744 Query: 332 cgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgtttcagg 391 ||||| ||||| || || || ||| ||||| |||||||||||||||||||| |||| | Sbjct: 743 aaacctttgcgatatcgacgtt-gtttggagtaaccttttcttccataacctgcttcaag 685 Query: 392 atagatagagcaatggtttcag 413 ||||| || || ||||| |||| Sbjct: 684 atagacagggctatggtctcag 663
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 83.8 bits (42), Expect = 4e-13 Identities = 119/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtg 331 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||| || || | Sbjct: 807 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtag-ttgggag 749 Query: 332 cgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgtttcagg 391 ||||| ||||| || || || ||| ||||| |||||||||||||||||||| |||| | Sbjct: 748 aaacctttgcgatatcgacgtt-gtttggagtaaccttttcttccataacctgcttcaag 690 Query: 392 atagatagagcaatggtttcag 413 ||||| || || ||||| |||| Sbjct: 689 atagacagggctatggtctcag 668
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 763 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 705 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 704 taggatagatacagctattgtttcag 679
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtt 325 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 100488 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagtt 100541 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 365 accttttcttccataacctgtttcaggatagatagagcaatggtttcag 413 |||||||||||||||||||| |||| |||||| || || ||||| |||| Sbjct: 100678 accttttcttccataacctgcttcaagatagacagggctatggtctcag 100726
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 659 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 601 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 600 taggatagatacagctattgtttcag 575
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 762 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 704 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 703 taggatagatacagctattgtttcag 678
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtt 325 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 23084485 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagtt 23084538 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 365 accttttcttccataacctgtttcaggatagatagagcaatggtttcag 413 |||||||||||||||||||| |||| |||||| || || ||||| |||| Sbjct: 23084675 accttttcttccataacctgcttcaagatagacagggctatggtctcag 23084723
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 737 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 679 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 678 taggatagatacagctattgtttcag 653
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 697 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 639 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 638 taggatagatacagctattgtttcag 613
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 67.9 bits (34), Expect = 2e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 701 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 643 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 642 taggatagatacagctattgtttcag 617
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 272 tcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggtagtt 325 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 23394395 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagtt 23394448 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 365 accttttcttccataacctgtttcaggatagatagagcaatggtttcag 413 |||||||||||||||||||| |||| |||||| || || ||||| |||| Sbjct: 23394585 accttttcttccataacctgcttcaagatagacagggctatggtctcag 23394633
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 270 tttcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggta 322 |||||||||||||| ||||| || |||||||||| ||||||||| |||||||| Sbjct: 18912612 tttcacaatcgtgcgatgacggcctcgacctctgtaggggtgtagaggtggta 18912664 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 6033886 ataataattattattttttg 6033867
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 270 tttcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggta 322 |||||||||||||| ||||| || |||||||||| ||||||||| |||||||| Sbjct: 18838839 tttcacaatcgtgcgatgacggcctcgacctctgtaggggtgtagaggtggta 18838891 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 6033788 ataataattattattttttg 6033769
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 270 tttcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggta 322 |||||||||||||| ||||| || |||||||||| ||||||||| |||||||| Sbjct: 57767 tttcacaatcgtgcgatgacggcctcgacctctgtaggggtgtagaggtggta 57715
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 270 tttcacaatcgtgctatgactgcttcgacctctgcaggggtgtaaaggtggta 322 |||||||||||||| ||||| || |||||||||| ||||||||| |||||||| Sbjct: 8729 tttcacaatcgtgcgatgacggcctcgacctctgtaggggtgtagaggtggta 8781
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 63.9 bits (32), Expect = 4e-07 Identities = 94/112 (83%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 285 atgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtgcgaccttggcgat 344 ||||| ||||| ||||| ||||||||||| |||||||| || || || |||||||| || Sbjct: 355 atgacggcttccacctcggcaggggtgtagaggtggtacttgggg-gcaaccttggcaat 413 Query: 345 gtctacattagttgggagtcaccttttcttccataacctgtttcaggataga 396 || || || ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 414 atcgacgttgtttggg-gtcaccttctcttccataacctgcttcaggataga 464
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 63.9 bits (32), Expect = 4e-07 Identities = 94/112 (83%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 285 atgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtgcgaccttggcgat 344 ||||| ||||| ||||| ||||||||||| |||||||| || || || |||||||| || Sbjct: 1107 atgacggcttccacctcggcaggggtgtagaggtggtacttgggg-gcaaccttggcaat 1049 Query: 345 gtctacattagttgggagtcaccttttcttccataacctgtttcaggataga 396 || || || ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1048 atcgacgttgtttggg-gtcaccttctcttccataacctgcttcaggataga 998
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 63.9 bits (32), Expect = 4e-07 Identities = 94/112 (83%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 285 atgactgcttcgacctctgcaggggtgtaaaggtggtagtttcggtgcgaccttggcgat 344 ||||| ||||| ||||| ||||||||||| |||||||| || || || |||||||| || Sbjct: 1000 atgacggcttccacctcggcaggggtgtagaggtggtacttg-ggagcaaccttggcaat 942 Query: 345 gtctacattagttgggagtcaccttttcttccataacctgtttcaggataga 396 || || || ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 941 atcgacgttgtttggg-gtcaccttctcttccataacctgcttcaggataga 891
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 60.0 bits (30), Expect = 6e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| ||||| |||||||||||||| || || || Sbjct: 697 ggtgcgactttggcaatgtcgacatt-gtttggagtaaccttttcttccattacttgctt 639 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 638 taggatagatacagctattgtttcag 613
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 60.0 bits (30), Expect = 6e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| |||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 683 ggtgcgactctggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 625 Query: 388 caggatagatagagcaatggtttcag 413 |||||||||| ||| || ||||||| Sbjct: 624 taggatagatacagctattgtttcag 599
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 60.0 bits (30), Expect = 6e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 328 ggtgcgaccttggcgatgtctacattagttgggagtcaccttttcttccataacctgttt 387 |||||||| ||||| ||||| ||||| ||| |||||||||||||||||||| || || || Sbjct: 1286 ggtgcgactttggcaatgtcgacatt-gtttggagtcaccttttcttccattacttgctt 1228 Query: 388 caggatagatagagcaatggtttcag 413 ||| |||||| ||| || ||||||| Sbjct: 1227 tagggtagatacagctattgtttcag 1202
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 744 ggagtcaccttttcttccataacttgctttaggatagata 705
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 629 ggagtcaccttttcttccataacttgctttaggatagata 590
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 742 ggagtcaccttttcttccataacttgctttaggatagata 703
>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-54-C04 Length = 543 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 271 ggagtcaccttttcttccataacttgctttaggatagata 232
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 744 ggagtcaccttttcttccataacttgctttaggatagata 705
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 359 ggagtcaccttttcttccataacctgtttcaggatagata 398 ||||||||||||||||||||||| || || |||||||||| Sbjct: 722 ggagtcaccttttcttccataacttgctttaggatagata 683
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 52.0 bits (26), Expect = 0.001 Identities = 88/106 (83%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 291 gcttcgacctctgcaggggtgtaaaggtggtagtttcggtgcgaccttggcgatgtctac 350 ||||||||||| ||||||||||| |||||||| || || || |||||||| || || || Sbjct: 891 gcttcgacctcggcaggggtgtagaggtggta-cttgggagcaaccttggcaatatcgac 833 Query: 351 attagttgggagtcaccttttcttccataacctgtttcaggataga 396 || ||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 832 gtt-gtttggggtcaccttctcctccataacctgcttcagaataga 788
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 48.1 bits (24), Expect = 0.023 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 334 accttggcgatgtctacattagttgggagtcaccttttcttccataac 381 |||||||| ||||| || || ||||||||| ||||||||||||||||| Sbjct: 666 accttggcaatgtcaacgtt-gttgggagtgaccttttcttccataac 620
>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE Length = 122965 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 96 taattattattttttgaattttacaaca 123 ||||||||||||||||||||||| |||| Sbjct: 118776 taattattattttttgaattttaaaaca 118803
>emb|CR352297.14| Zebrafish DNA sequence from clone CH211-165L15 in linkage group 8, complete sequence Length = 159143 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 80 tgtcaacaccacataataattattatttttt 110 |||||| |||||||||| ||||||||||||| Sbjct: 90697 tgtcaaaaccacataattattattatttttt 90727
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 ccacataataattattatttttt 110 ||||||||||||||||||||||| Sbjct: 9444912 ccacataataattattatttttt 9444934
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 ccacataataattattatttttt 110 ||||||||||||||||||||||| Sbjct: 115780 ccacataataattattatttttt 115802
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 ccacataataattattatttttt 110 ||||||||||||||||||||||| Sbjct: 26898 ccacataataattattatttttt 26920
>emb|AL137078.20| Human DNA sequence from clone RP1-66N13 on chromosome 20 Contains a novel gene (LOC284749) and two novel genes, complete sequence Length = 80725 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttgaa 113 |||||||||||||||||||||| Sbjct: 77602 ataataattattattttttgaa 77581
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttta 118 |||||||||||||||||||||| Sbjct: 1385240 aattattattttttgaatttta 1385219
>ref|NM_073570.1| Caenorhabditis elegans ACyLtransferase-like family member (acl-10) (acl-10) mRNA, complete cds Length = 1320 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttta 118 |||||||||||||||||||||| Sbjct: 597 aattattattttttgaatttta 576
>gb|AC007374.6|AC007374 Homo sapiens chromosome 14 clone RP11-325L17 map 14q31, complete sequence Length = 190565 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 cataataattattattttttga 112 |||||||||||||||||||||| Sbjct: 85343 cataataattattattttttga 85322
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 365 accttttcttccataacctgtttcaggatagata 398 ||||||||||||||||| || || |||||||||| Sbjct: 39529 accttttcttccataacttgctttaggatagata 39562
>gb|AC005940.3|AC005940 Homo sapiens chromosome 17, clone hRPK.167_N_20, complete sequence Length = 158414 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 cataataattattattttttga 112 |||||||||||||||||||||| Sbjct: 116002 cataataattattattttttga 115981
>emb|AL121784.5|CNS01DSH Human chromosome 14 DNA sequence BAC R-305I3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180523 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 cataataattattattttttga 112 |||||||||||||||||||||| Sbjct: 62862 cataataattattattttttga 62841
>gb|AC154135.3| Tribolium castaneum BAC T.cast_C40D19 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 130926 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 taattattattttttgaatttt 117 |||||||||||||||||||||| Sbjct: 25623 taattattattttttgaatttt 25602
>emb|BX005262.5| Zebrafish DNA sequence from clone DKEY-76I1 in linkage group 6, complete sequence Length = 3994 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 ataataattattattttttgaatttt 117 ||||||||||||||| |||||||||| Sbjct: 3322 ataataattattattatttgaatttt 3347
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tgcttctgctaaattaaaggca 200 |||||||||||||||||||||| Sbjct: 1663084 tgcttctgctaaattaaaggca 1663063
>gb|U25649.1|ATU25649 Arabidopsis thaliana putative pectin methylesterase (ATPME2) gene, partial cds, and (ATPME1) gene, complete cds Length = 5873 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 365 accttttcttccataacctgtttcaggatagata 398 ||||||||||||||||| || || |||||||||| Sbjct: 5714 accttttcttccataacttgctttaggatagata 5747
>emb|Z72511.1|CEF55A11 Caenorhabditis elegans Cosmid F55A11, complete sequence Length = 27598 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttta 118 |||||||||||||||||||||| Sbjct: 12142 aattattattttttgaatttta 12121
>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence Length = 175575 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 ataataattattattttttgaatttt 117 ||||||||||||||| |||||||||| Sbjct: 174248 ataataattattattatttgaatttt 174223
>gb|AC144926.6| Mus musculus chromosome 8, clone RP23-8E24, complete sequence Length = 214694 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttta 118 ||||||||||||||||||||| Sbjct: 8024 attattattttttgaatttta 8004
>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence Length = 184017 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 taattattattttttgaattt 116 ||||||||||||||||||||| Sbjct: 86415 taattattattttttgaattt 86395
>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence Length = 213746 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 79174 aattattattttttgaatttt 79194
>gb|AC148136.3| Callicebus moloch clone LB5-135M4, complete sequence Length = 121700 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 119007 ataataattattattttttga 119027
>emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome Length = 143171 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 ataataattattattttttgaattt 116 ||||||||||||||||||| ||||| Sbjct: 3406 ataataattattattttttaaattt 3430
>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207366 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 147552 ataataattattattttttga 147532
>gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome 9, complete sequence Length = 148461 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 taataattattattttttgaatttt 117 |||||||||||||||||| |||||| Sbjct: 92601 taataattattatttttttaatttt 92625
>ref|XM_724717.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01969) partial mRNA Length = 4476 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 1327 aattattattttttgaatttt 1307
>gb|AC092013.3| Homo sapiens BAC clone RP11-695L4 from 7, complete sequence Length = 129756 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 attattttttgaattttacaa 121 ||||||||||||||||||||| Sbjct: 38578 attattttttgaattttacaa 38598
>ref|XM_674134.1| Plasmodium berghei strain ANKA hypothetical protein (PB001348.02.0) partial mRNA Length = 3288 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 1321 aattattattttttgaatttt 1301
>ref|XM_663202.1| Cryptosporidium hominis TU502 vacuolar protein sorting-associated protein (Chro.30060) partial mRNA Length = 13242 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 7375 aattattattttttgaatttt 7355
>gb|AC143340.4| Medicago truncatula clone mth2-7f4, complete sequence Length = 114535 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 80320 aattattattttttgaatttt 80340
>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence Length = 135959 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 96172 aattattattttttgaatttt 96152
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence Length = 116810 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 102487 aattattattttttgaatttt 102507 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 31900 aattattattttttgaatttt 31880
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence Length = 125121 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 112177 aattattattttttgaatttt 112157
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 17024 aattattattttttgaatttt 17044
>gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete sequence Length = 136410 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 11630 aattattattttttgaatttt 11650
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence Length = 124972 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 94605 aattattattttttgaatttt 94585
>gb|AC135606.17| Medicago truncatula clone mth2-10j1, complete sequence Length = 118120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 1406 aattattattttttgaatttt 1386
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence Length = 127295 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 31876 aattattattttttgaatttt 31896
>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence Length = 131213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 11112 aattattattttttgaatttt 11092
>gb|AC139290.15| Medicago truncatula clone mth2-23f4, complete sequence Length = 127701 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 45837 aattattattttttgaatttt 45857
>gb|AC152499.17| Medicago truncatula clone mth2-56f20, complete sequence Length = 125561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 80528 aattattattttttgaatttt 80508
>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence Length = 200015 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 154421 ataataattattattttttga 154441
>emb|AL512605.13| Human DNA sequence from clone RP11-15J10 on chromosome 9 Contains a pseudogene similar to part of COBW doamin family protein, the FOXD4L2 gene for forkhead box D4 like 2, an immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a pseudogene similar to part of cytochrome P450 family protein, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) and four CpG islands, complete sequence Length = 158187 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 155695 ataataattattattttttga 155675
>emb|AL356976.30| Human DNA sequence from clone RP4-700P11 on chromosome 1p32.1-32.3 Contains the gene for glutathione peroxidase 6 (GPX6) and the 5' end of gene MGC52498, complete sequence Length = 64323 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 26662 ataataattattattttttga 26642
>emb|AL356244.12| Human DNA sequence from clone RP11-174M15 on chromosome 9 Contains the 5' end of the gene for COBW-like protein (LOC55871), 2 novel genes, the 5' end of a novel gene (contains FLJ36253 and FLJ00026) and a CpG island, complete sequence Length = 175153 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 28244 ataataattattattttttga 28224
>emb|X65484.1|EGCCSA E.gracilis chloroplast ccsA gene Length = 1681 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ataataattattattttttgaattt 116 ||||||||||||||||||| ||||| Sbjct: 312 ataataattattattttttaaattt 288
>emb|AL669946.9| Mouse DNA sequence from clone RP23-71G18 on chromosome 11 Contains the 3' end of a novel gene, the Nsg2 gene neuron specific gene family, a novel gene and a CpG island, complete sequence Length = 177182 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ttattattttttgaattttac 119 ||||||||||||||||||||| Sbjct: 52264 ttattattttttgaattttac 52244
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 150302 ataataattattattttttga 150322
>gb|AC156374.3| Loxodonta africana clone VMRC15-462M16, complete sequence Length = 88098 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 51075 ataataattattattttttga 51055
>gb|AC093605.3| Homo sapiens BAC clone RP11-583P24 from 4, complete sequence Length = 187035 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 56264 ataataattattattttttga 56244
>gb|AC159101.2| Mus musculus BAC clone RP24-212G22 from chromosome 9, complete sequence Length = 183017 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 taattattattttttgaattt 116 ||||||||||||||||||||| Sbjct: 177090 taattattattttttgaattt 177070
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence Length = 128806 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 49833 aattattattttttgaatttt 49853
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 71760 aattattattttttgaatttt 71740
>gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete sequence Length = 115770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 86967 aattattattttttgaatttt 86987
>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence Length = 126875 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 109825 aattattattttttgaatttt 109805
>gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete sequence Length = 127642 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 107555 aattattattttttgaatttt 107575
>gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, complete sequence Length = 155125 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 55596 ataataattattattttttga 55576
>ref|XM_626628.1| Cryptosporidium parvum Iowa II VPS13p like protein involved in vacuolar sorting (cgd3_430), partial mRNA Length = 13263 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 7375 aattattattttttgaatttt 7355
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttta 118 ||||||||||||||||||||| Sbjct: 141188 attattattttttgaatttta 141208
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence Length = 197131 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttta 118 ||||||||||||||||||||| Sbjct: 6338 attattattttttgaatttta 6358
>gb|AC158222.6| Mus musculus chromosome 8, clone RP23-117M15, complete sequence Length = 207233 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttta 118 ||||||||||||||||||||| Sbjct: 119630 attattattttttgaatttta 119650
>gb|AC016575.7| Homo sapiens chromosome 5 clone CTB-40H15, complete sequence Length = 184562 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 85070 ataataattattattttttga 85050
>gb|AY028080.1| Mus musculus pericentriolar material gene 1 protein (Pcm1) gene, partial cds; and acid ceramidase (Asah1) and FSHD Region Gene 1 protein (Frg1) genes, complete cds Length = 183135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttta 118 ||||||||||||||||||||| Sbjct: 90801 attattattttttgaatttta 90821
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 205202 ataataattattattttttga 205182
>gb|AC116565.4| Homo sapiens BAC clone RP11-1263C18 from 4, complete sequence Length = 97217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 27401 ataataattattattttttga 27381
>gb|AC087579.17| Homo sapiens chromosome 8, clone RP11-429B7, complete sequence Length = 122553 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 19930 ataataattattattttttga 19950
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 34554 ataataattattattttttga 34534
>emb|BX005340.7| Zebrafish DNA sequence from clone DKEY-16N15 in linkage group 8, complete sequence Length = 119181 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 90525 ataataattattattttttga 90545
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 365 accttttcttccataacctgtttcaggatagatagagcaatggtttcag 413 |||||||||||||| || || || |||||||||| ||| || ||||||| Sbjct: 30295 accttttcttccattacttgctttaggatagatacagctattgtttcag 30247
>gb|AC002073.1|AC002073 Human PAC clone RP3-515N1 from 22q11.2-q22, complete sequence Length = 128978 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 85403 ataataattattattttttga 85383
>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3, complete sequence Length = 126881 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 66258 aattattattttttgaatttt 66238
>emb|AL034393.1|CEY18D10A Caenorhabditis elegans YAC Y18D10A, complete sequence Length = 152878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 25914 aattattattttttgaatttt 25934
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3, complete sequence Length = 122591 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaatttt 117 ||||||||||||||||||||| Sbjct: 84945 aattattattttttgaatttt 84965
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 1329008 ataataattattattttttga 1329028
>gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome 5, complete sequence Length = 185497 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttga 112 ||||||||||||||||||||| Sbjct: 58095 ataataattattattttttga 58075
>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ttattttttgaattttacaac 122 ||||||||||||||||||||| Sbjct: 155261 ttattttttgaattttacaac 155281
>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence Length = 206083 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ttgtgcttctgctaaattaa 195 |||||||||||||||||||| Sbjct: 193982 ttgtgcttctgctaaattaa 193963
>ref|XM_631670.1| Dictyostelium discoideum hypothetical protein (DDB0215965), partial mRNA Length = 2037 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 678 attattattttttgaatttt 659
>ref|XM_628870.1| Dictyostelium discoideum hypothetical protein (DDB0192195), partial mRNA Length = 3813 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaattt 116 |||||||||||||||||||| Sbjct: 1957 aattattattttttgaattt 1938
>gb|AY510454.1| Aspergillus nomius isolate AN13137 aflatoxin biosynthesis gene cluster, complete sequence Length = 75352 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 gcctctaaaccttcttgtcaacac 88 ||||||||||||||| |||||||| Sbjct: 66211 gcctctaaaccttctagtcaacac 66188
>gb|AY534144.1| Saprolegnia ferax strain ATCC 36051 mitochondion, complete genome Length = 46930 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 aataattattattttttgaatttt 117 ||||||||||||||||| |||||| Sbjct: 18751 aataattattatttttttaatttt 18774
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 taataattattattttttgaattt 116 ||||||||||||||||| |||||| Sbjct: 105708 taataattattatttttagaattt 105731
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 480267 ataataattattattttttg 480248
>gb|AC087325.9| Trypanosoma brucei chromosome 4 clone RPCI93-29M18, complete sequence Length = 123258 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 32513 ataataattattattttttg 32494
>gb|AC102873.10| Mus musculus chromosome 17, clone RP24-536C15, complete sequence Length = 155210 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 ataattattattttttgaatttta 118 ||||||||||||||||| |||||| Sbjct: 132627 ataattattattttttgcatttta 132604
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence Length = 121915 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 89384 attattattttttgaatttt 89403
>gb|AC149426.1| Populus trichocarpa clone Pop1-053A03, complete sequence Length = 148552 Score = 40.1 bits (20), Expect = 5.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 92 ataataattattattttttgaattttac 119 ||||||||||||||||||| |||||||| Sbjct: 22221 ataataattattatttttt-aattttac 22247
>gb|AC149295.1| Populus trichocarpa clone Pop1-008L01, complete sequence Length = 101981 Score = 40.1 bits (20), Expect = 5.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 92 ataataattattattttttgaattttac 119 ||||||||||||||||||| |||||||| Sbjct: 28188 ataataattattatttttt-aattttac 28162
>gb|DQ137802.1| Anopheles gambiae female-specific doublesex protein mRNA, complete cds Length = 5030 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 167 attattattttttgaatttt 148
>gb|DQ137801.1| Anopheles gambiae male-specific doublesex protein mRNA, complete cds Length = 5908 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 167 attattattttttgaatttt 148
>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence Length = 331039 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 taataattattattttttgaattt 116 |||||||||||||||||| ||||| Sbjct: 62680 taataattattattttttaaattt 62657
>emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chromosome 14, complete sequence Length = 173093 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 166031 attattattttttgaatttt 166050
>ref|XM_745305.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06490) partial mRNA Length = 1461 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gggtgtaaaggtggtagtttcggt 330 ||||||||||||||| |||||||| Sbjct: 1215 gggtgtaaaggtggtcgtttcggt 1192
>emb|Z71263.1|CEF52A8 Caenorhabditis elegans Cosmid F52A8, complete sequence Length = 35268 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 5954 attattattttttgaatttt 5935
>gb|AC127579.4| Mus musculus BAC clone RP23-434O19 from chromosome 14, complete sequence Length = 181361 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 178462 attattattttttgaatttt 178443
>emb|CR385065.21| Zebrafish DNA sequence from clone CH211-232F6 in linkage group 6, complete sequence Length = 194459 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 acataataattattattttt 109 |||||||||||||||||||| Sbjct: 8858 acataataattattattttt 8877
>ref|XM_723735.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07848) partial mRNA Length = 500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 acataataattattattttt 109 |||||||||||||||||||| Sbjct: 250 acataataattattattttt 231
>ref|XM_961118.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1100c) partial mRNA Length = 6084 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aattattattttttgaattt 116 |||||||||||||||||||| Sbjct: 166 aattattattttttgaattt 147
>ref|XM_721410.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05941) partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 acataataattattattttt 109 |||||||||||||||||||| Sbjct: 866 acataataattattattttt 847
>ref|XM_735139.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105869.00.0) partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 351 attattattttttgaatttt 332
>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence Length = 115045 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 taataattattattttttga 112 |||||||||||||||||||| Sbjct: 77769 taataattattattttttga 77788
>gb|AC007026.3| Homo sapiens PAC clone RP4-751G11 from 7, complete sequence Length = 120809 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 28904 ataataattattattttttg 28885
>gb|AC146185.2| Pan troglodytes BAC clone RP43-35O6 from 7, complete sequence Length = 156598 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 103939 ataataattattattttttg 103958
>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence Length = 205171 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 18073 ataataattattattttttg 18054
>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence Length = 118505 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 taattattattttttgaatt 115 |||||||||||||||||||| Sbjct: 112095 taattattattttttgaatt 112114
>emb|AL603832.28| Human DNA sequence from clone RP11-426L16 on chromosome 1 Contains the 3' end of the CAPZA1 gene for capping protein (actin filament) muscle Z-line, alpha 1, the MOV10 gene for Mov10, Moloney leukemia virus 10, homolog (mouse), a novel gene, the ARHC gene for ras homolog gene family, member C, the gene for a novel protein, the gene for a novel protein (TAFA3), a nuclear transport factor 2 (NUTF2) pseudogene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 193604 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 12636 ataataattattattttttg 12655
>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete sequence Length = 164559 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tattattttttgaattttac 119 |||||||||||||||||||| Sbjct: 149435 tattattttttgaattttac 149416
>emb|AL360155.11| Human DNA sequence from clone RP11-721G11 on chromosome 6 Contains a pseudogene similar to part of KIAA1925, complete sequence Length = 107908 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 taataattattattttttga 112 |||||||||||||||||||| Sbjct: 79263 taataattattattttttga 79244
>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete sequence Length = 254449 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 attattattttttgaatttt 117 |||||||||||||||||||| Sbjct: 100024 attattattttttgaatttt 100005
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 ataattattattttttgaatttta 118 ||||||||||||||||||| |||| Sbjct: 186335 ataattattattttttgaacttta 186358
>emb|AL139234.19| Human DNA sequence from clone RP3-438D16 on chromosome Xq24-26.1 Contains the PDCD8 gene for programmed cell death 8 (apoptosis-inducing factor) (AIF), the RAB33A gene for RAB33A, member RAS oncogene family (S10, RabS10), the 3' end of a novel gene (FLJ20095) and two CpG islands, complete sequence Length = 90007 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 88614 ataataattattattttttg 88633
>emb|AL139334.10| Human DNA sequence from clone RP1-250C18 on chromosome 6q11.1-12, complete sequence Length = 102010 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 9323 ataataattattattttttg 9304
>emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H10 on chromosome 6q16.1-16.3, complete sequence Length = 150355 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 taaattaaaggcatcaggat 207 |||||||||||||||||||| Sbjct: 110078 taaattaaaggcatcaggat 110097
>emb|AL023799.5|HS322P7 Human DNA sequence from clone RP3-322P7 on chromosome Xq25-26.2 Contains the 5' end of a novel gene (FLJ20095) and a CpG island, complete sequence Length = 93705 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 607 ataataattattattttttg 626
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 aattattattttttgaattt 116 |||||||||||||||||||| Sbjct: 233529 aattattattttttgaattt 233548
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 134203 ataataattattattttttg 134184
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aataattattattttttgaa 113 |||||||||||||||||||| Sbjct: 94071 aataattattattttttgaa 94090
>gb|AC097626.9| Homo sapiens X BAC RP11-527B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115435 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacacacagcagaagggaa 230 |||||||||||||||||||| Sbjct: 88000 agacacacagcagaagggaa 88019
>emb|CR388021.9| Zebrafish DNA sequence from clone CH211-189L17 in linkage group 5, complete sequence Length = 150805 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ataattattattttttgaat 114 |||||||||||||||||||| Sbjct: 114571 ataattattattttttgaat 114552
>emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, complete sequence Length = 158249 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 1418 ataataattattattttttg 1399
>gb|AC024681.12| Homo sapiens chromosome 8, clone RP11-622O11, complete sequence Length = 194516 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aacctgtttcaggatagata 398 |||||||||||||||||||| Sbjct: 111395 aacctgtttcaggatagata 111376
>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence Length = 138838 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 taattattattttttgaatt 115 |||||||||||||||||||| Sbjct: 7631 taattattattttttgaatt 7650
>gb|AC008683.7| Homo sapiens chromosome 5 clone CTB-58D19, complete sequence Length = 114127 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 26171 ataataattattattttttg 26190
>gb|AC112195.2| Homo sapiens chromosome 5 clone RP11-436K21, complete sequence Length = 135423 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 131774 ataataattattattttttg 131793
>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence Length = 163962 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 145784 ataataattattattttttg 145765
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acaccacataataattatta 104 |||||||||||||||||||| Sbjct: 76541 acaccacataataattatta 76560
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 taattattattttttgaatt 115 |||||||||||||||||||| Sbjct: 888380 taattattattttttgaatt 888361
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aaaccaaaagaggcaaacat 153 |||||||||||||||||||| Sbjct: 18598576 aaaccaaaagaggcaaacat 18598595
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ttattttttgaattttacaa 121 |||||||||||||||||||| Sbjct: 7523151 ttattttttgaattttacaa 7523132
>gb|AC097480.3| Homo sapiens BAC clone RP11-123O22 from 4, complete sequence Length = 168994 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 35977 ataataattattattttttg 35958
>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence Length = 136240 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 taattattattttttgaatt 115 |||||||||||||||||||| Sbjct: 55735 taattattattttttgaatt 55754
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cataataattattatttttt 110 |||||||||||||||||||| Sbjct: 63790 cataataattattatttttt 63809
>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence Length = 165373 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 taataattattattttttga 112 |||||||||||||||||||| Sbjct: 105452 taataattattattttttga 105433
>gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, complete sequence Length = 183773 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 taataattattattttttga 112 |||||||||||||||||||| Sbjct: 33932 taataattattattttttga 33951
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ataataattattattttttgaatt 115 ||||||||||||||||||| |||| Sbjct: 165423 ataataattattatttttttaatt 165400
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 taattattattttttgaatt 115 |||||||||||||||||||| Sbjct: 52507 taattattattttttgaatt 52488
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aaaccaaaagaggcaaacat 153 |||||||||||||||||||| Sbjct: 181459 aaaccaaaagaggcaaacat 181478
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aaaccaaaagaggcaaacat 153 |||||||||||||||||||| Sbjct: 50679 aaaccaaaagaggcaaacat 50698
>gb|AY553352.1| Chrysolina virgata isolate N579 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 750 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 taaattaaaggcatcaggat 207 |||||||||||||||||||| Sbjct: 547 taaattaaaggcatcaggat 528
>gb|AY327402.2| Choristoneura fumiferana defective nucleopolyhedrovirus complete genome Length = 131160 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 ataattattattttttgaatttta 118 |||||| ||||||||||||||||| Sbjct: 34233 ataatttttattttttgaatttta 34210
>gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, complete sequence Length = 208009 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ataataattattattttttgaatt 115 ||||||||||||||||||| |||| Sbjct: 60315 ataataattattatttttttaatt 60292
>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete sequence Length = 166963 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 64021 ataataattattattttttg 64040
>emb|CT571242.10| Mouse DNA sequence from clone RP24-82P13 on chromosome 17, complete sequence Length = 236078 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 ataattattattttttgaatttta 118 ||||||||||||||||| |||||| Sbjct: 79470 ataattattattttttgcatttta 79493
>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence Length = 157691 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 caattgtgcttctgctaaattaaa 196 ||||||||||||||||| |||||| Sbjct: 41383 caattgtgcttctgctagattaaa 41406
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 atcatcgagcaattgtgcttctgc 187 ||||| |||||||||||||||||| Sbjct: 1169652 atcattgagcaattgtgcttctgc 1169675
>emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in linkage group 1, complete sequence Length = 141396 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ataattattattttttgaat 114 |||||||||||||||||||| Sbjct: 117781 ataattattattttttgaat 117800
>emb|Z69658.1|CEC36H8 Caenorhabditis elegans Cosmid C36H8, complete sequence Length = 19036 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ataattattattttttgaat 114 |||||||||||||||||||| Sbjct: 13453 ataattattattttttgaat 13434
>emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M6 (ESSAII project) Length = 93353 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 acataatcaaaccaaaagaggcaa 149 |||||| ||||||||||||||||| Sbjct: 55776 acataaccaaaccaaaagaggcaa 55799
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 9148 ataataattattattttttg 9167
>emb|AL928778.4|CNS08CC8 Oryza sativa chromosome 12, . BAC OSJNBb0074J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125153 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ataataattattattttttg 111 |||||||||||||||||||| Sbjct: 71460 ataataattattattttttg 71479
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 acataatcaaaccaaaagaggcaa 149 |||||| ||||||||||||||||| Sbjct: 144587 acataaccaaaccaaaagaggcaa 144564
>emb|CT025548.8| Mouse DNA sequence from clone RP23-451I14 on chromosome 14, complete sequence Length = 176550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ttgtgcttctgctaaattaa 195 |||||||||||||||||||| Sbjct: 3518 ttgtgcttctgctaaattaa 3499
>emb|AL928555.8| Zebrafish DNA sequence from clone DKEY-29E5, complete sequence Length = 189224 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 acataataattattattttt 109 |||||||||||||||||||| Sbjct: 155998 acataataattattattttt 156017
>gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1732_H01, complete sequence Length = 85722 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ttattttttgaattttacaa 121 |||||||||||||||||||| Sbjct: 42751 ttattttttgaattttacaa 42732 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,697,413 Number of Sequences: 3902068 Number of extensions: 4697413 Number of successful extensions: 146611 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 145338 Number of HSP's gapped (non-prelim): 1276 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
