>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA|
           reducing factor 3B) (Up-frameshift suppressor 3 homolog
           B) (hUpf3B) (hUpf3p-X)
          Length = 483

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 52  DTTPAYRNFYASSGTTTDEMNSTPQGL 132
           D  P YR F  S  T  ++M STP+ L
Sbjct: 155 DDDPEYRKFLESYATDNEKMTSTPETL 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,958,464
Number of Sequences: 219361
Number of extensions: 678984
Number of successful extensions: 1535
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)