Clone Name | rbasd3m13 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|CP000302.1| Shewanella denitrificans OS217, complete genome | 42 | 0.82 | 2 | emb|AL935255.1| Lactobacillus plantarum strain WCFS1 complete ge... | 40 | 3.2 | 3 | gb|AC019057.8| Homo sapiens BAC clone RP11-121A1 from 2, complet... | 40 | 3.2 | 4 | ref|XM_315016.2| Anopheles gambiae str. PEST ENSANGP00000022258 ... | 40 | 3.2 |
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 0.82 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 atggcatgacctgcaaactgg 208 ||||||||||||||||||||| Sbjct: 2723931 atggcatgacctgcaaactgg 2723951
>emb|AL935255.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 4/11 Length = 269050 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gattacatcgccttggcgat 54 |||||||||||||||||||| Sbjct: 205688 gattacatcgccttggcgat 205669
>gb|AC019057.8| Homo sapiens BAC clone RP11-121A1 from 2, complete sequence Length = 186896 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tacaagggtacatggattacatcg 44 ||||||| |||||||||||||||| Sbjct: 71441 tacaaggctacatggattacatcg 71418
>ref|XM_315016.2| Anopheles gambiae str. PEST ENSANGP00000022258 (ENSANGG00000019769), mRNA Length = 820 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ggtgatggaaccaccgggaa 229 |||||||||||||||||||| Sbjct: 501 ggtgatggaaccaccgggaa 482 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,369,157 Number of Sequences: 3902068 Number of extensions: 1369157 Number of successful extensions: 22952 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22941 Number of HSP's gapped (non-prelim): 11 length of query: 250 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 228 effective length of database: 17,147,199,772 effective search space: 3909561548016 effective search space used: 3909561548016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)