ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3m12 |
|---|---|
| Clone Library Name | barley_pub |
>XPP1_RAT (O54975) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 131 bits (329), Expect = 1e-30 Identities = 65/129 (50%), Positives = 88/129 (68%), Gaps = 4/129 (3%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 S+LNVHEGP IS++ + + PL+A M VTDEPGYYEDG FGIR+ENV++V A TK+NF Sbjct: 493 SFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNF 551 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EW 216 +G L+FE +T P QTK+I+ LT E +W+N YH C+ ++ L Q + EW Sbjct: 552 NNRGSLTFEPLTLVPIQTKMIDVDALTDKECDWLNSYHQTCRDVIGKELQTQGRQEALEW 611 Query: 215 LRKATEPIT 189 L + TEPI+ Sbjct: 612 LLRETEPIS 620
>XPP1_MOUSE (Q6P1B1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 129 bits (324), Expect = 6e-30 Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 4/129 (3%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 S+LNVHEGP IS++ + + PL+A M VTDEPGYYEDG FGIR+ENV++V A TK+NF Sbjct: 493 SFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNF 551 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EW 216 +G L+FE +T P QTK+I+ LT E +W+N YH C+ ++ L Q + EW Sbjct: 552 NNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNSYHQTCRDVVGKELQSQGRQEALEW 611 Query: 215 LRKATEPIT 189 L + TEP++ Sbjct: 612 LIRETEPVS 620
>XPP1_HUMAN (Q9NQW7) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 622 Score = 125 bits (315), Expect = 6e-29 Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 4/129 (3%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 S+LNVHEGP IS++ + + PL+A M VTDEPGYYEDG FGIR+ENV++V TK+NF Sbjct: 492 SFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNF 550 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EW 216 +G L+FE +T P QTK+I+ LT E +W+N YH C+ ++ L Q + EW Sbjct: 551 NNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEW 610 Query: 215 LRKATEPIT 189 L + T+PI+ Sbjct: 611 LIRETQPIS 619
>YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-)| Length = 598 Score = 114 bits (284), Expect = 2e-25 Identities = 55/124 (44%), Positives = 80/124 (64%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 S+LNVHE P I R + PLQA M ++EPG+YEDG+FG R+EN + + E +T+ F Sbjct: 475 SFLNVHELPVGIGSREVFNSAPLQAGMVTSNEPGFYEDGHFGYRVENCVYITEVNTENRF 534 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQEKEWLRKA 204 + YL + +T AP+ KLI+ +LL+P E++++N YHS+ L L+V K+WL K Sbjct: 535 AGRTYLGLKDLTLAPHCQKLIDPSLLSPEEVKYLNEYHSEVYTTLSPMLSVSAKKWLSKH 594 Query: 203 TEPI 192 T PI Sbjct: 595 TSPI 598
>XPP_YEAST (Q07825) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9)| Length = 749 Score = 107 bits (266), Expect = 3e-23 Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 2/126 (1%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 S+LNVHEGP + FRP N PL+A +++EPGYY+DG +GIR+E+ +++K+A K NF Sbjct: 629 SFLNVHEGPMGVGFRPHLMNFPLRAGNIISNEPGYYKDGEYGIRIESDMLIKKATEKGNF 688 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQ--EKEWLR 210 L FE++T PY KLINT LL E +N YH+ + + +L Q +WL+ Sbjct: 689 -----LKFENMTVVPYCRKLINTKLLNEEEKTQINEYHARVWRTIVHFLQPQSISYKWLK 743 Query: 209 KATEPI 192 + T P+ Sbjct: 744 RETSPL 749
>XPP2_PIG (Q95333) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 673 Score = 90.9 bits (224), Expect = 2e-18 Identities = 50/130 (38%), Positives = 82/130 (63%), Gaps = 4/130 (3%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 ++L VHE P + F+ N+P+ M + EPGYY+DG FGIRLE+V +V EA TK+ Sbjct: 527 NFLCVHEWP--VGFQYG--NIPMAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAKTKY-- 580 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLN----VQEKEW 216 YL+FE ++ PY KLI+ +LL+P +++++N Y+ ++ + L ++E W Sbjct: 581 -PGTYLTFEVVSLVPYDRKLIDVSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSW 639 Query: 215 LRKATEPITA 186 L++ TEP++A Sbjct: 640 LQRHTEPLSA 649
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 674 Score = 89.4 bits (220), Expect = 7e-18 Identities = 49/130 (37%), Positives = 81/130 (62%), Gaps = 4/130 (3%) Frame = -3 Query: 563 SYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNF 384 ++L VHE P + F+ + N+ + M + EPGYY+DG FGIRLE+V +V EA TK+ Sbjct: 528 NFLCVHEWP--VGFQ--SNNIAMAKGMFTSIEPGYYKDGEFGIRLEDVALVVEAKTKY-- 581 Query: 383 GEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLN----VQEKEW 216 YL+FE +++ PY LI+ +LL+P ++++N Y+ ++ + L ++E EW Sbjct: 582 -PGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQYLNRYYQTIREKVGPELQRRQLLEEFEW 640 Query: 215 LRKATEPITA 186 L++ TEP+ A Sbjct: 641 LQQHTEPLAA 650
>Y806_METJA (Q58216) Hypothetical peptidase MJ0806 (EC 3.4.-.-)| Length = 347 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 L VHE P L + ++ L+ M VT EPG Y FG+R+E++ +VK+ Sbjct: 283 LEVHEEPRLSNKLKDDEDIILKEGMVVTIEPGLYLKDKFGVRIEDLYLVKK 333
>PEPE_MYCTU (P65810) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 L VHE P++++ ++ L M + EPG Y G +G R+E+++IV E Sbjct: 310 LCVHEEPYIVA----GNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVTE 356
>PEPE_MYCBO (P65811) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 L VHE P++++ ++ L M + EPG Y G +G R+E+++IV E Sbjct: 310 LCVHEEPYIVA----GNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVTE 356
>YPDF_ECOLI (P76524) Aminopeptidase ypdF (EC 3.4.11.-)| Length = 361 Score = 34.7 bits (78), Expect = 0.19 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIV 411 + VHE P F P LQ M +T EPG Y G G+R+E+V++V Sbjct: 296 IEVHEDPR---FSPRDTTT-LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340
>YQHT_BACSU (P54518) Putative peptidase yqhT (EC 3.4.-.-)| Length = 353 Score = 33.9 bits (76), Expect = 0.33 Identities = 21/51 (41%), Positives = 29/51 (56%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 + VHE P L S R SA L+ M VT EPG Y G+R+E+ +++ E Sbjct: 291 MEVHESPGL-SVRSSAI---LEPGMVVTVEPGIYIPETGGVRIEDDIVITE 337
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 33.1 bits (74), Expect = 0.56 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -2 Query: 327 TYKHRLVDPCGDRMGKRVPLRLPENLGVLPKCSGEGMAEEGH*TYNCEQLSQLLHGYCCC 148 T+KHR+VD G R G P+ GE + + C+ SQLL C Sbjct: 141 THKHRVVDLVGYRAGWYDEEARERQASQCPQHPGEALC------FLCQPCSQLLCKDCRL 194 Query: 147 APNIDR-CLP 121 P+ID CLP Sbjct: 195 GPHIDHPCLP 204
>PEPQ_PYRFU (P81535) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 348 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTK 393 L +HE P + + + L+ M +T EPG Y G+R+E+ +++ E K Sbjct: 288 LEIHEWPRISQYDETV----LKEGMVITIEPGIYIPKLGGVRIEDTVLITENGAK 338
>YOD1_SCHPO (Q9UUD8) Probable peptidase C18A7.01 (EC 3.4.-.-)| Length = 451 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 L HE +L P+ + P+Q T EPG Y GIR+E+ ++ + Sbjct: 388 LEEHEQTYL---NPANKGTPVQKGNVFTVEPGIYIPDEIGIRIEDAVLASD 435
>AMPP_MYCPN (P75313) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P) (APP) (Aminoacylproline aminopeptidase) Length = 354 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 L++HE P++ ++ N L + +T EPG Y GIR+E++++VK+ Sbjct: 294 LDIHEMPNV----STSYNKLLCENAVITIEPGIYIPSVGGIRIEDMVLVKD 340
>PEPQ_PYRHO (O58885) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 351 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTK 393 L VHE P + + + L+ M +T EPG Y G+R+E+ +++ + +K Sbjct: 291 LEVHEWPRVSQYDETV----LREGMVITIEPGIYIPKIGGVRIEDTILITKNGSK 341
>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 915 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 209 SSAIPSPEHLGKTPRFSGSRSGTRLPIRSPQG 304 SSA PS + L P FSG+R+G P+ P G Sbjct: 341 SSAKPSSDLLDLQPDFSGARAGAAAPVPPPTG 372
>PEPQ_LACHE (O84913) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -3 Query: 554 NVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENV-LIVKEADTKFNFGE 378 NVHE P ++ ++ L+ M + EPG Y G G+R+E+ ++ K+ F + Sbjct: 303 NVHEYPSIVQ----GNDLVLEEGMCFSIEPGIYIPGFAGVRIEDCGVVTKDGFKTFTHTD 358 Query: 377 K 375 K Sbjct: 359 K 359
>FET3_CANAL (P78591) Iron transport multicopper oxidase FET3 precursor (EC| 1.-.-.-) Length = 624 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = -3 Query: 554 NVHEGPHLISFRPSARNVPLQASMTVTDEPGYY-----EDGNFGIRLENVLIVKEADTKF 390 N +GP +++ P + TVTD+ G Y G +G + V I+++ D + Sbjct: 91 NQMDGPEMVTQCPIPPGETYLYNFTVTDQVGTYWYHSHTGGQYGDGMRGVFIIEDDDFPY 150 Query: 389 NFGEKGYLS 363 ++ E+ L+ Sbjct: 151 HYDEEVVLT 159
>PEPQ_LACDE (Q9S6S1) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENV-LIVKEADTKFNFG 381 + VHE P + + +V L+ M + EPG Y G G+R+E+ ++ KE F Sbjct: 302 MEVHEFPSIAN----GNDVVLEEGMCFSIEPGIYIPGFAGVRIEDCGVLTKEGFKPFTHT 357 Query: 380 EK 375 K Sbjct: 358 SK 359
>AMPP_MYCGE (P47566) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P) (APP) (Aminoacylproline aminopeptidase) Length = 354 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = -3 Query: 557 LNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 405 +++HE P++ + N L + VT EPG Y GIR+E++++VK+ Sbjct: 294 IDIHEMPNV----SQSYNKLLCENGVVTIEPGIYIPNLGGIRIEDMVLVKK 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,844,592 Number of Sequences: 219361 Number of extensions: 1746837 Number of successful extensions: 3827 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3714 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3814 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
