ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 293 tcgtccgtgggcagctggtacctgcacacggggcacgagctgtgcgtctccagccacggc 352 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 11790978 tcgtccgtgggcagctggtacctgcacacggggcaggagctgtgcgcctccagccacggc 11790919 Query: 353 aggatgcacatgtcgtggaaccggtgcttgcacggcatctccttggcctcgccgccagcg 412 |||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| || Sbjct: 11790918 aggatgcagccgtcgtggaacctgtgcttgcacggcatctccctcgcctcgccgccggcc 11790859 Query: 413 gcgaactcgtccaggcacaccgggcaggtcgc 444 ||||||||||||||||||||||||| ||||| Sbjct: 11790858 tcgaactcgtccaggcacaccgggcacgtcgc 11790827 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 473 gcggcaacggcctccatcttcgccggcagcgtaccttgccggctcgggtcggtctcggcc 532 ||||| ||||||||| || | |||||| |||| || || ||| |||||||||| |||||| Sbjct: 11790792 gcggccacggcctccttcctggccggcggcgtgccctgacggttcgggtcggtgtcggcc 11790733 Query: 533 aggtactccagcagcaagtcaagcccggggcc 564 ||||| |||||||||| ||| ||||||||||| Sbjct: 11790732 aggtagtccagcagcaggtccagcccggggcc 11790701 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14935727 cgtggaaccggtgcccgcacggcatctcctt 14935697 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14914526 cgtggaaccggtgcccgcacggcatctcctt 14914496 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14877927 cgtggaaccggtgcccgcacggcatctcctt 14877897 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14763697 cgtggaaccggtgcccgcacggcatctcctt 14763727 Score = 40.1 bits (20), Expect = 9.1 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 324 ggcacgagctgtgcgtctccagccacggcaggatgcacatgtcgtggaaccggtgc 379 |||||||||||||| ||| |||||| |||| |||||| || ||||||||| |||| Sbjct: 9832875 ggcacgagctgtgcatcttcagccatggcacaatgcacttg-cgtggaacctgtgc 9832821 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggc 624 |||||||||| ||||||||||||| Sbjct: 5979256 ggcggcggcgccgccattgctggc 5979279
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 293 tcgtccgtgggcagctggtacctgcacacggggcacgagctgtgcgtctccagccacggc 352 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 11787741 tcgtccgtgggcagctggtacctgcacacggggcaggagctgtgcgcctccagccacggc 11787682 Query: 353 aggatgcacatgtcgtggaaccggtgcttgcacggcatctccttggcctcgccgccagcg 412 |||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| || Sbjct: 11787681 aggatgcagccgtcgtggaacctgtgcttgcacggcatctccctcgcctcgccgccggcc 11787622 Query: 413 gcgaactcgtccaggcacaccgggcaggtcgc 444 ||||||||||||||||||||||||| ||||| Sbjct: 11787621 tcgaactcgtccaggcacaccgggcacgtcgc 11787590 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 473 gcggcaacggcctccatcttcgccggcagcgtaccttgccggctcgggtcggtctcggcc 532 ||||| ||||||||| || | |||||| |||| || || ||| |||||||||| |||||| Sbjct: 11787555 gcggccacggcctccttcctggccggcggcgtgccctgacggttcgggtcggtgtcggcc 11787496 Query: 533 aggtactccagcagcaagtcaagcccggggcc 564 ||||| |||||||||| ||| ||||||||||| Sbjct: 11787495 aggtagtccagcagcaggtccagcccggggcc 11787464 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14930261 cgtggaaccggtgcccgcacggcatctcctt 14930231 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14909060 cgtggaaccggtgcccgcacggcatctcctt 14909030 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14872461 cgtggaaccggtgcccgcacggcatctcctt 14872431 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 14758231 cgtggaaccggtgcccgcacggcatctcctt 14758261 Score = 40.1 bits (20), Expect = 9.1 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 324 ggcacgagctgtgcgtctccagccacggcaggatgcacatgtcgtggaaccggtgc 379 |||||||||||||| ||| |||||| |||| |||||| || ||||||||| |||| Sbjct: 9830996 ggcacgagctgtgcatcttcagccatggcacaatgcacttg-cgtggaacctgtgc 9830942 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggc 624 |||||||||| ||||||||||||| Sbjct: 5978469 ggcggcggcgccgccattgctggc 5978492
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 293 tcgtccgtgggcagctggtacctgcacacggggcacgagctgtgcgtctccagccacggc 352 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 119675 tcgtccgtgggcagctggtacctgcacacggggcaggagctgtgcgcctccagccacggc 119734 Query: 353 aggatgcacatgtcgtggaaccggtgcttgcacggcatctccttggcctcgccgccagcg 412 |||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| || Sbjct: 119735 aggatgcagccgtcgtggaacctgtgcttgcacggcatctccctcgcctcgccgccggcc 119794 Query: 413 gcgaactcgtccaggcacaccgggcaggtcgc 444 ||||||||||||||||||||||||| ||||| Sbjct: 119795 tcgaactcgtccaggcacaccgggcacgtcgc 119826 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 473 gcggcaacggcctccatcttcgccggcagcgtaccttgccggctcgggtcggtctcggcc 532 ||||| ||||||||| || | |||||| |||| || || ||| |||||||||| |||||| Sbjct: 119861 gcggccacggcctccttcctggccggcggcgtgccctgacggttcgggtcggtgtcggcc 119920 Query: 533 aggtactccagcagcaagtcaagcccggggcc 564 ||||| |||||||||| ||| ||||||||||| Sbjct: 119921 aggtagtccagcagcaggtccagcccggggcc 119952
>dbj|AK068144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135G08, full insert sequence Length = 1362 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 293 tcgtccgtgggcagctggtacctgcacacggggcacgagctgtgcgtctccagccacggc 352 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1066 tcgtccgtgggcagctggtacctgcacacggggcaggagctgtgcgcctccagccacggc 1007 Query: 353 aggatgcacatgtcgtggaaccggtgcttgcacggcatctccttggcctcgccgccagcg 412 |||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| || Sbjct: 1006 aggatgcagccgtcgtggaacctgtgcttgcacggcatctccctcgcctcgccgccggcc 947 Query: 413 gcgaactcgtccaggcacaccgggcaggtcgc 444 ||||||||||||||||||||||||| ||||| Sbjct: 946 tcgaactcgtccaggcacaccgggcacgtcgc 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 473 gcggcaacggcctccatcttcgccggcagcgtaccttgccggctcgggtcggtctcggcc 532 ||||| ||||||||| || | |||||| |||| || || ||| |||||||||| |||||| Sbjct: 880 gcggccacggcctccttcctggccggcggcgtgccctgacggttcgggtcggtgtcggcc 821 Query: 533 aggtactccagcagcaagtcaagcccggggcc 564 ||||| |||||||||| ||| ||||||||||| Sbjct: 820 aggtagtccagcagcaggtccagcccggggcc 789
>gb|AE009037.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 63 of 256 of the complete sequence Length = 11357 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 254 gcggtttcgtcggcgccattgccgg 278 ||||||||||||||||||||||||| Sbjct: 10668 gcggtttcgtcggcgccattgccgg 10692
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 254 gcggtttcgtcggcgccattgccgg 278 ||||||||||||||||||||||||| Sbjct: 691221 gcggtttcgtcggcgccattgccgg 691245
>ref|XM_476331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 405 cgccagcggcgaactcgtccaggcacac 432 |||| ||||||||||||||||||||||| Sbjct: 655 cgccggcggcgaactcgtccaggcacac 628
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 405 cgccagcggcgaactcgtccaggcacac 432 |||| ||||||||||||||||||||||| Sbjct: 4006264 cgccggcggcgaactcgtccaggcacac 4006291 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgc 620 |||||||||||||||||||| Sbjct: 25936331 ggcggcggcggcgccattgc 25936350 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ccgccgcccgccgctgcttccacc 204 ||||||||||||||||| |||||| Sbjct: 15810886 ccgccgcccgccgctgcctccacc 15810909 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ggcgtgcattgccattggat 247 |||||||||||||||||||| Sbjct: 7608283 ggcgtgcattgccattggat 7608302
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 405 cgccagcggcgaactcgtccaggcacac 432 |||| ||||||||||||||||||||||| Sbjct: 49919 cgccggcggcgaactcgtccaggcacac 49946
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 405 cgccagcggcgaactcgtccaggcacac 432 |||| ||||||||||||||||||||||| Sbjct: 112140 cgccggcggcgaactcgtccaggcacac 112167
>ref|NM_188125.1| Oryza sativa (japonica cultivar-group), Ozsa8557 predicted mRNA Length = 261 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctgg 623 ||||||||||||||||||||||| Sbjct: 42 ggcggcggcggcgccattgctgg 64
>ref|XM_470760.1| Oryza sativa (japonica cultivar-group), mRNA Length = 663 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 427 cgtggaaccggtgcccgcacggcatctcctt 397
>ref|XM_470755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 283 cgtggaaccggtgcccgcacggcatctcctt 253
>ref|XM_470747.1| Oryza sativa (japonica cultivar-group), mRNA Length = 540 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 427 cgtggaaccggtgcccgcacggcatctcctt 397
>ref|XM_470722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 376 cgtggaaccggtgcccgcacggcatctcctt 346
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 128236 cgtggaaccggtgcccgcacggcatctcctt 128266 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 107035 cgtggaaccggtgcccgcacggcatctcctt 107065
>gb|AF543418.1| Oryza sativa (japonica cultivar-group) major facilitator superfamily antiporter (mfs1) mRNA, complete cds Length = 1813 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctgg 623 ||||||||||||||||||||||| Sbjct: 134 ggcggcggcggcgccattgctgg 156
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 102609 cgtggaaccggtgcccgcacggcatctcctt 102639
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 54841 cgtggaaccggtgcccgcacggcatctcctt 54871 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 18242 cgtggaaccggtgcccgcacggcatctcctt 18272
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 ggcggcggcggcgccattgctgg 623 ||||||||||||||||||||||| Sbjct: 9901578 ggcggcggcggcgccattgctgg 9901556 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 gcggcggcggcgccattgctgg 623 |||||||||||||||||||||| Sbjct: 9907859 gcggcggcggcgccattgctgg 9907838 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 6037949 cggcggcgccattgctggct 6037930 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 6031716 cggcggcgccattgctggct 6031697
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 ggcggcggcggcgccattgctgg 623 ||||||||||||||||||||||| Sbjct: 37344 ggcggcggcggcgccattgctgg 37322 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 gcggcggcggcgccattgctgg 623 |||||||||||||||||||||| Sbjct: 43625 gcggcggcggcgccattgctgg 43604
>dbj|AK110517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-G10, full insert sequence Length = 881 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgtggaaccggtgcttgcacggcatctcctt 396 |||||||||||||| ||||||||||||||| Sbjct: 567 cgtggaaccggtgcccgcacggcatctcctt 537
>dbj|AK065048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I09, full insert sequence Length = 1790 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctgg 623 ||||||||||||||||||||||| Sbjct: 138 ggcggcggcggcgccattgctgg 160
>gb|AY107485.1| Zea mays PCO090409 mRNA sequence Length = 615 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 302 ggcagctggtacctgcacacggggcacgagctgtgcgtctccagccacggcaggatgca 360 ||||||| | ||| |||||||||||| |||||||| ||| ||||| ||||||||||| Sbjct: 333 ggcagctcgaaccggcacacggggcaagagctgtggagctcaagccatggcaggatgca 275
>ref|NM_188127.1| Oryza sativa (japonica cultivar-group), Ozsa8559 predicted mRNA Length = 240 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 602 gcggcggcggcgccattgctgg 623 |||||||||||||||||||||| Sbjct: 37 gcggcggcggcgccattgctgg 58
>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence Length = 252639 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 239205 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 239156
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 cggcggcggcgccattgctggc 624 |||||||||||||||||||||| Sbjct: 25 cggcggcggcgccattgctggc 4
>ref|NM_193087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 558 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 367 gtggaaccggtgcttgcacggcatctcctt 396 ||||||||||||| ||||||||||||||| Sbjct: 327 gtggaaccggtgcccgcacggcatctcctt 298
>gb|BC016543.1| Mus musculus ring finger protein 126, mRNA (cDNA clone MGC:27801 IMAGE:3158083), complete cds Length = 1619 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 886 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 837
>ref|NM_144528.1| Mus musculus ring finger protein 126 (Rnf126), mRNA Length = 1619 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 886 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 837
>gb|AC124407.4| Mus musculus BAC clone RP24-389C22 from chromosome 10, complete sequence Length = 157929 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 77929 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 77978
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 cggcggcggcgccattgctggc 624 |||||||||||||||||||||| Sbjct: 135914 cggcggcggcgccattgctggc 135893
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 603 cggcggcggcgccattgctggc 624 |||||||||||||||||||||| Sbjct: 40628 cggcggcggcgccattgctggc 40649
>dbj|AK154781.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630106J19 product:ring finger protein 126, full insert sequence Length = 1570 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 880 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 831
>dbj|AK042319.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630082B21 product:ring finger protein 126, full insert sequence Length = 1410 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 711 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 662
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 cggcggcggcgccattgctggc 624 |||||||||||||||||||||| Sbjct: 13289665 cggcggcggcgccattgctggc 13289644
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 367 gtggaaccggtgcttgcacggcatctcctt 396 ||||||||||||| ||||||||||||||| Sbjct: 26120420 gtggaaccggtgcccgcacggcatctcctt 26120391 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggct 625 ||||||||||||||||||| ||||| Sbjct: 28160288 ggcggcggcggcgccattgatggct 28160312
>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete sequence Length = 222344 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacggca 389 ||||||||| |||| |||||| ||||||||||| |||| ||||| |||| Sbjct: 169168 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgcagggca 169217
>dbj|AK120260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046F21, full insert sequence Length = 788 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 367 gtggaaccggtgcttgcacggcatctcctt 396 ||||||||||||| ||||||||||||||| Sbjct: 407 gtggaaccggtgcccgcacggcatctcctt 378
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 367 gtggaaccggtgcttgcacggcatctcctt 396 ||||||||||||| ||||||||||||||| Sbjct: 12278 gtggaaccggtgcccgcacggcatctcctt 12249
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 cggcggcggcgccattgctggc 624 |||||||||||||||||||||| Sbjct: 13297005 cggcggcggcgccattgctggc 13296984
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 gcggcggcggcgccattgctgg 623 |||||||||||||||||||||| Sbjct: 2352 gcggcggcggcgccattgctgg 2331
>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence Length = 233775 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 ggctcctcgctctggcatgtgcatg 646 ||||||| ||||||||||||||||| Sbjct: 8076 ggctcctggctctggcatgtgcatg 8100
>gb|AC104046.2| Homo sapiens chromosome 15, clone CTD-2262B20, complete sequence Length = 104794 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 ggctcctcgctctggcatgtgcatg 646 ||||||| ||||||||||||||||| Sbjct: 98175 ggctcctggctctggcatgtgcatg 98199
>gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217197 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgca 384 ||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 200129 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgca 200085
>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds Length = 11462 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 gcccctggcggcggcggcgcc 615 ||||||||||||||||||||| Sbjct: 6821 gcccctggcggcggcggcgcc 6801
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggct 625 ||||||||||||||||||| ||||| Sbjct: 15833 ggcggcggcggcgccattgatggct 15857
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggct 625 ||||||||||||||||||| ||||| Sbjct: 143584 ggcggcggcggcgccattgatggct 143608
>dbj|AK106702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E04, full insert sequence Length = 2389 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 601 ggcggcggcggcgccattgctggct 625 ||||||||||||||||||| ||||| Sbjct: 54 ggcggcggcggcgccattgatggct 30
>gb|AF208682.1|AF208682 Amycolatopsis mediterranei recombination repairing protein (recA) and putative regulatory protein (recX) genes, complete cds Length = 3584 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ccaccgtcgctatcgccctcgacgtcgcg 228 |||||| ||| |||||||||||||||||| Sbjct: 338 ccaccggcgcgatcgccctcgacgtcgcg 366
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete sequence Length = 110682 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 tggcggcggcggcgccattgc 620 ||||||||||||||||||||| Sbjct: 23939 tggcggcggcggcgccattgc 23919
>gb|BC099810.1| Rattus norvegicus ring finger protein 126, mRNA (cDNA clone MGC:124770 IMAGE:5621533), complete cds Length = 1450 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgca 384 ||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 893 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgca 849
>ref|NM_001033702.1| Rattus norvegicus ring finger protein 126 (Rnf126), mRNA Length = 1450 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgca 384 ||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 893 ctccagccagggcacgatgcagctgtcgtggaacaggtggttgca 849
>gb|BC086782.1| Mus musculus golgi autoantigen, golgin subfamily a, 5, mRNA (cDNA clone MGC:102087 IMAGE:6813878), complete cds Length = 2689 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1323 actccagcagcaagtcaagc 1342
>ref|NM_188396.1| Oryza sativa (japonica cultivar-group), Ozsa8122 predicted mRNA Length = 1539 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 44 cggcggcgccattgctggct 63
>ref|NM_188395.1| Oryza sativa (japonica cultivar-group), Ozsa8121 predicted mRNA Length = 1536 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 65 cggcggcgccattgctggct 84
>gb|DQ213806.1| Taeniopygia guttata clone 0061P0014B04 ring finger protein 126 variant 1-like mRNA, complete sequence Length = 966 Score = 40.1 bits (20), Expect = 9.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 340 ctccagccacggcaggatgcacatgtcgtggaaccggtgcttgcacgg 387 |||||||||||| | |||||| |||||||||| |||| |||||||| Sbjct: 794 ctccagccacgggacgatgcagccgtcgtggaacaggtgattgcacgg 747
>gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, complete sequence Length = 171161 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 taaaacaaattaaacatatt 96 |||||||||||||||||||| Sbjct: 155583 taaaacaaattaaacatatt 155602
>gb|BT018308.1| Zea mays clone EL01T0206H06.c mRNA sequence Length = 1142 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gaactcgtccaggcacaccg 434 |||||||||||||||||||| Sbjct: 414 gaactcgtccaggcacaccg 395
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ccaccgccgcccgccgctgc 197 |||||||||||||||||||| Sbjct: 416235 ccaccgccgcccgccgctgc 416216
>gb|BC016883.1| Mus musculus golgi autoantigen, golgin subfamily a, 5, mRNA (cDNA clone MGC:18341 IMAGE:4235952), complete cds Length = 3415 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 2051 actccagcagcaagtcaagc 2070
>ref|XM_871210.1| PREDICTED: Bos taurus similar to C-jun-amino-terminal kinase interacting protein 2 (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase scaffold protein 2) (Islet-brain-2) (IB-2) (Mitogen-activated protein kinase 8-interacting protein 2) (LOC618893), mRNA Length = 3086 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 ccctggcggcggcggcgcca 616 |||||||||||||||||||| Sbjct: 1190 ccctggcggcggcggcgcca 1209
>gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, complete sequence Length = 271253 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 taaaacaaattaaacatatt 96 |||||||||||||||||||| Sbjct: 174022 taaaacaaattaaacatatt 174003
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tcgtcggcgccattgccggc 279 |||||||||||||||||||| Sbjct: 1781712 tcgtcggcgccattgccggc 1781731
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 ctccttggcctcgccgccagcggc 414 |||||||||| ||||||||||||| Sbjct: 2666444 ctccttggccacgccgccagcggc 2666421
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gtcggcggtttcgtcggcgc 269 |||||||||||||||||||| Sbjct: 12735 gtcggcggtttcgtcggcgc 12716
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gtcggcggtttcgtcggcgc 269 |||||||||||||||||||| Sbjct: 12795 gtcggcggtttcgtcggcgc 12776
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gtcggcggtttcgtcggcgc 269 |||||||||||||||||||| Sbjct: 12750 gtcggcggtttcgtcggcgc 12731
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgc 620 |||||||||||||||||||| Sbjct: 44918 ggcggcggcggcgccattgc 44937
>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence Length = 180948 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tgcgtctccagccacggcag 354 |||||||||||||||||||| Sbjct: 143318 tgcgtctccagccacggcag 143337
>gb|AE012326.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 234 of 460 of the complete genome Length = 10551 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 atcgcgatgacgaggagctt 133 |||||||||||||||||||| Sbjct: 4299 atcgcgatgacgaggagctt 4318
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 caacggcctccatcttcgcc 496 |||||||||||||||||||| Sbjct: 2829005 caacggcctccatcttcgcc 2829024
>dbj|AK138455.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330009K07 product:golgi autoantigen, golgin subfamily a, 5, full insert sequence Length = 2691 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1482 actccagcagcaagtcaagc 1501
>dbj|AK153010.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830113N19 product:golgi autoantigen, golgin subfamily a, 5, full insert sequence Length = 2678 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1331 actccagcagcaagtcaagc 1350
>dbj|AK152533.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830078F24 product:golgi autoantigen, golgin subfamily a, 5, full insert sequence Length = 2678 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1331 actccagcagcaagtcaagc 1350
>dbj|AK168765.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920051G20 product:golgi autoantigen, golgin subfamily a, 5, full insert sequence Length = 2671 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1327 actccagcagcaagtcaagc 1346
>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence Length = 216718 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 202855 actccagcagcaagtcaagc 202836
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 atcgcgatgacgaggagctt 133 |||||||||||||||||||| Sbjct: 2328363 atcgcgatgacgaggagctt 2328344
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgctggc 624 |||||||||| ||||||||||||| Sbjct: 37791 ggcggcggcgccgccattgctggc 37814
>dbj|AK007592.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810023J06 product:golgi autoantigen, golgin subfamily a, 5, full insert sequence Length = 1788 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1325 actccagcagcaagtcaagc 1344
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgc 620 |||||||||||||||||||| Sbjct: 30947546 ggcggcggcggcgccattgc 30947565
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 tggcggcggcggcgccattg 619 |||||||||||||||||||| Sbjct: 11756420 tggcggcggcggcgccattg 11756401
>gb|AC019090.9| Homo sapiens BAC clone RP11-375P12 from 2, complete sequence Length = 87224 Score = 40.1 bits (20), Expect = 9.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 21 acaatacttgaaccnacagttcaacaa 47 |||| ||||||||| |||||||||||| Sbjct: 33653 acaaaacttgaaccaacagttcaacaa 33679
>gb|AC137936.3| Homo sapiens chromosome 3 clone RP11-456N14, complete sequence Length = 187869 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tgcgtctccagccacggcag 354 |||||||||||||||||||| Sbjct: 5532 tgcgtctccagccacggcag 5551
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 40.1 bits (20), Expect = 9.1 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 324 ggcacgagctgtgcgtctccagccacggcaggatgcacatgtcgtggaaccggtgc 379 |||||||||||||| ||| |||||| |||| |||||| || ||||||||| |||| Sbjct: 41622 ggcacgagctgtgcatcttcagccatggcacaatgcacttg-cgtggaacctgtgc 41676
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 tggcggcggcggcgccattg 619 |||||||||||||||||||| Sbjct: 191054 tggcggcggcggcgccattg 191035
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 105837 cggcggcgccattgctggct 105818 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 99604 cggcggcgccattgctggct 99585
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 62306 cggcggcgccattgctggct 62287 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 56073 cggcggcgccattgctggct 56054
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgtcggcgccattgccggc 279 |||||||||||||||||||| Sbjct: 6845763 tcgtcggcgccattgccggc 6845744 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cctcgccgccagcggcgaac 418 |||||||||||||||||||| Sbjct: 2811210 cctcgccgccagcggcgaac 2811191
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gccaccgccgcccgccgctg 196 |||||||||||||||||||| Sbjct: 5216658 gccaccgccgcccgccgctg 5216677
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ggcgtgcattgccattggat 247 |||||||||||||||||||| Sbjct: 31538 ggcgtgcattgccattggat 31557
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgc 620 |||||||||||||||||||| Sbjct: 91429 ggcggcggcggcgccattgc 91448
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ccgccgcccgccgctgcttccacc 204 ||||||||||||||||| |||||| Sbjct: 23889 ccgccgcccgccgctgcctccacc 23912
>dbj|AK120689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169E21, full insert sequence Length = 2172 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 tggcggcggcggcgccattg 619 |||||||||||||||||||| Sbjct: 103 tggcggcggcggcgccattg 84
>gb|AF026274.1|AF026274 Mus musculus Sumiko (sumiko) mRNA, complete cds Length = 2761 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1313 actccagcagcaagtcaagc 1332
>dbj|AK100534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N06, full insert sequence Length = 3665 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 601 ggcggcggcggcgccattgctggc 624 |||||||||| ||||||||||||| Sbjct: 493 ggcggcggcgccgccattgctggc 470
>dbj|AK071150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H20, full insert sequence Length = 1810 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cggcggcgccattgctggct 625 |||||||||||||||||||| Sbjct: 119 cggcggcgccattgctggct 138
>gb|AY576273.1| Bacteriophage Phi JL001, complete genome Length = 63649 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 ccttggcctcgccgccagcg 412 |||||||||||||||||||| Sbjct: 6813 ccttggcctcgccgccagcg 6794
>emb|CT030725.15| Mouse DNA sequence from clone RP24-281O2 on chromosome 16, complete sequence Length = 115213 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 aagacggctaaaacaaattaaacatatt 96 ||||| ||||||| |||||||||||||| Sbjct: 32327 aagacagctaaaataaattaaacatatt 32354
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcggcggcggcgccattgc 620 |||||||||||||||||||| Sbjct: 124550 ggcggcggcggcgccattgc 124569
>dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-657K20, complete sequence Length = 189499 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tattctcccgtggttggttt 112 |||||||||||||||||||| Sbjct: 135015 tattctcccgtggttggttt 134996
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgccgcccgccgctgcttcc 201 |||||||||||||||||||| Sbjct: 5975046 cgccgcccgccgctgcttcc 5975027
>ref|NM_013747.2| Mus musculus golgi autoantigen, golgin subfamily a, 5 (Golga5), mRNA Length = 3415 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 2051 actccagcagcaagtcaagc 2070
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tcgccgccagcggcgaactc 420 |||||||||||||||||||| Sbjct: 111364 tcgccgccagcggcgaactc 111383
>dbj|AB016784.1| Mus musculus ret-11 mRNA, complete cds Length = 2829 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 actccagcagcaagtcaagc 556 |||||||||||||||||||| Sbjct: 1482 actccagcagcaagtcaagc 1501 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,871,957 Number of Sequences: 3902068 Number of extensions: 4871957 Number of successful extensions: 141752 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 137742 Number of HSP's gapped (non-prelim): 4011 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
