Clone Name | rbasd3l24 |
---|---|
Clone Library Name | barley_pub |
>T4S5_HUMAN (O14894) Transmembrane 4 L6 family member 5 (Tetraspan| transmembrane protein L6H) Length = 197 Score = 33.1 bits (74), Expect = 0.65 Identities = 23/92 (25%), Positives = 34/92 (36%) Frame = +2 Query: 326 CPRMEAAMVNTIAVLGMLTDFLSIAMNGTAAWTAANHWGENFLVCSRHTPRGTFAAIPSI 505 C R + T+ ++ ++ + L + NG +WT NH + G P I Sbjct: 6 CARCVGLSLITLCLVCIVANALLLVPNGETSWTNTNHLSLQVWLMGGFIGGGLMVLCPGI 65 Query: 506 AMATIFAGRGCGRRDFTRVVRAXACSCSNNCR 601 A A G+GC A C N CR Sbjct: 66 A-AVRAGGKGC----------CGAGCCGNRCR 86
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 31.6 bits (70), Expect = 1.9 Identities = 39/143 (27%), Positives = 51/143 (35%), Gaps = 5/143 (3%) Frame = -3 Query: 540 PQPLPAKMVAIAMLGMAANVPLGVWREHTKKFSPQWFAAVHAAVPFIAMLRKSVNMPRTA 361 P P+ A A A+ AA + T + A AA P A TA Sbjct: 884 PAPVAAAATAAAITATAATIT-------TTMVAAAPVAVAAAAAPAAAAAPSPATAAATA 936 Query: 360 MVFTIAASILGQ-----TIGSRAERIRLKTLAAKGTAGPAATVTVMYPDKSGSCSDAEGK 196 + AA+ GQ ++ S A AA PAA V P + A + Sbjct: 937 AAVSPAAA--GQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQ 994 Query: 195 AWDPLALKIPGSANAGAPAPTPS 127 A P + P SA A AP P P+ Sbjct: 995 ASAPAQTQAPTSAPAVAPTPAPT 1017
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/87 (27%), Positives = 33/87 (37%) Frame = -2 Query: 604 PPAIVAARASXRTHNPREVPPSTAPTCKDGSHRNARDGSKRPSRGVA*AHQEILPPVVRS 425 PP + ++ P VP STAP G N DG P+ PPVV S Sbjct: 292 PPLPATSASAPAPLVPATVPSSTAPNAAAGGAPNLADGFTSPT-----------PPVVSS 340 Query: 424 SPCRRSVHRDAEEVRQHAQNRDGVHHS 344 +P V+ ++ NR H+ Sbjct: 341 TP------PTGHPVQFYSMNRPASRHT 361
>ZN533_BRARE (Q6PBT9) Zinc finger protein 533| Length = 492 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -3 Query: 291 KTLAAKGTAGPAATVTVMYPDK-SGSCSDAEGKAWDPLAL-KIPGSANAGAPAP 136 KT+ + T T T + SCSD K+ +PLA K+P S A PAP Sbjct: 192 KTITSTSTNTTTTTTTTSSCTAVTASCSDQTEKSTEPLAAHKVPASPQAFVPAP 245
>PUR4_HUMAN (O15067) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1338 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 299 MRSALDPMVCPRMEAAMVNTIAVLGMLTDFLSIAMNGTAAWTA 427 ++S LDP V R+ A T V ++TD + +G W A Sbjct: 730 VKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAA 772
>MB11_ARATH (Q9SAV1) Myrosinase-binding protein-like At1g52030 (MBP)| Length = 642 Score = 30.0 bits (66), Expect = 5.5 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -3 Query: 228 KSGSCSDAEGKAWDPLALKIPGSANAGAPAPTPS 127 +SG DA G + PL P A A APAP P+ Sbjct: 277 RSGEAIDALGAHFAPLPAPTPAPAPAPAPAPAPA 310
>SYV_WIGBR (Q8D294) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.4 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +3 Query: 60 PITYTINRNQYPGRLNSTVR 119 PI Y +N+NQYPG S VR Sbjct: 436 PIWYDVNKNQYPGISESDVR 455
>RBGPR_HUMAN (Q9H2M9) Rab3 GTPase-activating protein non-catalytic subunit (Rab3| GTPase-activating protein 150 kDa subunit) (Rab3-GAP p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150) (RGAP-iso) Length = 1393 Score = 29.3 bits (64), Expect = 9.4 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Frame = -3 Query: 600 LQLLLHEQAXARTTLVKSLRPQPLP----AKMVAIAMLGMAANVPLGVWREHTKKFSPQ 436 LQ LLH + +T+ V SL+ +PLP K++ G+A +V ++++ FSP+ Sbjct: 899 LQTLLHSKGNTQTSKVSSLQAEPLPRLSVKKLLEGGKGGIADSVAKWIFKQ---DFSPE 954 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,074,380 Number of Sequences: 219361 Number of extensions: 1919510 Number of successful extensions: 5789 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5417 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5767 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)