>BCK2_YEAST (P33306) Protein BCK2 (Bypass of kinase C protein)|
          Length = 851

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
 Frame = +2

Query: 17  RHHGTRTRNKHQNSSKRRSGAQPAFHTTARIQFRLSPSCILTRKPCTTLGYTLQSKISES 196
           +H     +  H+   +  S AQ   H+ + I    +PS  L   P    GYTL S  S S
Sbjct: 472 QHKSGSVKGGHRKKQESISDAQRIQHSNSYIT---TPSSSLVTPPYYMTGYTLPSSASAS 528

Query: 197 SLPS-FAFHGLQLIHAYIGSGETGSTLRPFPCFSSATK-FAASREPSG 334
           S P+    H +     ++ S  T ++ RP   FSS  K ++   + SG
Sbjct: 529 STPNVLETHNMN----FVPSTSTVTSYRPSSNFSSFDKEYSNENDASG 572

>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)|
          Length = 638

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 80  QPAFHTTARIQFRLSPSCI-LTRKPCTTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSG 256
           +P   T++R    +SPS      +  +++G+T  + +  S++P F  H   ++ A  GSG
Sbjct: 4   KPPAGTSSRAWDGVSPSLSEWVLEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSG 63

Query: 257 ETGSTLRP 280
           +T S L P
Sbjct: 64  KTLSFLIP 71

>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)|
          Length = 638

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 155 TTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSGETGSTLRP 280
           +++G+T  + +  S++P F  H   ++ A  GSG+T S L P
Sbjct: 30  SSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIP 71

>SPB4_ASPFU (Q4WYJ7) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)|
          Length = 640

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 155 TTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSGETGSTLRP 280
           +++G+T  + +  S++P F  H   ++ A  GSG+T S L P
Sbjct: 30  SSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIP 71

>COA1_SHEEP (Q28559) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:|
            Biotin carboxylase (EC 6.3.4.14)]
          Length = 2346

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +1

Query: 169  HLTVQNLRELPTEFCLPRPSVNTRIYRLRRNWE-------HPPSVPLLLLSDKICSL*GA 327
            H  + NL  +   +CLP P  ++R+    ++W          PS+PLL L D + S+ G 
Sbjct: 854  HYVLDNLVNVMNGYCLPDPFFSSRV----KDWVEGLMKTLRDPSLPLLELQDIMTSVSGR 909

Query: 328  L 330
            +
Sbjct: 910  I 910

>COA1_BOVIN (Q9TTS3) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:|
            Biotin carboxylase (EC 6.3.4.14)]
          Length = 2346

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 169  HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330
            H  + NL  +   +CLP P  ++R    + RL +     PS+PLL L D + S+ G +
Sbjct: 854  HYVLDNLVNVMNGYCLPDPFFSSRVKDWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 910

>COAC_CHICK (P11029) Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC) [Includes: Biotin|
            carboxylase (EC 6.3.4.14)]
          Length = 2324

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 169  HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330
            H  + NL  +   +CLP P  +++    + RL +     PS+PLL L D + S+ G +
Sbjct: 854  HYVLDNLVNVMNGYCLPEPYFSSKVKGWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 910

>PERL_BOVIN (P80025) Lactoperoxidase precursor (EC 1.11.1.7) (LPO)|
          Length = 712

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +3

Query: 138 LLGNPVQRWVTPYSPKSQRAPYRVLPSTAFS*YTHI*AQEKLGAPSVRSLASPQRQNLQP 317
           +LG+ +Q+W+ PY   +     R+     F+         + G   V S  S   +N QP
Sbjct: 433 VLGSEMQKWIPPYQGYNNSVDPRISNVFTFA--------FRFGHMEVPSTVSRLDENYQP 484

Query: 318 LG--SPLVAHDI*VNSYRLWK 374
            G  + L  H +  N++R+ K
Sbjct: 485 WGPEAELPLHTLFFNTWRIIK 505

>Y301_METJA (Q57749) Hypothetical protein MJ0301|
          Length = 294

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 42  INIKTVPKDAAGHNLPFIQQHEYSF 116
           I I T+ +D AG+N PF  QH  SF
Sbjct: 11  IKIYTLAEDYAGYNSPFWSQHGLSF 35

>GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 652

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
 Frame = +1

Query: 157 NAGLHLTVQNLRELP-------TEFCLPRPSVNTRIYRLRRNWEHPPSVP 285
           NA L LT +  REL          FC  R ++     RLR  W HP  VP
Sbjct: 443 NADLRLTEKG-RELGLVDDVRWAAFCEKRDAIERETARLRAAWAHPARVP 491


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,954,851
Number of Sequences: 219361
Number of extensions: 1585279
Number of successful extensions: 4356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4356
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)