ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3l15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
2dbj|AK073235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
4emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 129 1e-26
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
7emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial se... 121 3e-24
8gb|AY106014.1| Zea mays PCO120164 mRNA sequence 107 4e-20
9ref|XM_473395.1| Oryza sativa (japonica cultivar-group), predic... 46 0.14
10emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.14
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
13dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
14dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
15ref|XM_482592.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.56
16ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.56
17gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.56
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
19dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
20dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
21dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
22dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
23dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
24dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homolo... 44 0.56
25gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, co... 42 2.2
26emb|BX649321.4| Zebrafish DNA sequence from clone DKEY-242D22 in... 42 2.2
27gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 2.2
28gb|AE004535.1| Pseudomonas aeruginosa PAO1, section 96 of 529 of... 42 2.2
29emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in... 42 2.2
30gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence 40 8.7
31gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 40 8.7
32gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
33ref|XM_474818.1| Oryza sativa (japonica cultivar-group), predic... 40 8.7
34ref|XM_467985.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.7
35gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
36ref|XM_324156.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.7
37ref|XM_955333.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.7
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.7
39ref|XM_846295.1| PREDICTED: Canis familiaris similar to cytochro... 40 8.7
40ref|XM_845533.1| PREDICTED: Canis familiaris similar to cytochro... 40 8.7
41gb|AC079306.7| Homo sapiens BAC clone CTD-2506A20 from 7, comple... 40 8.7
42gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.7
43gb|AC127579.4| Mus musculus BAC clone RP23-434O19 from chromosom... 40 8.7
44emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 i... 40 8.7
45ref|XM_961986.1| PREDICTED: Tribolium castaneum similar to CG948... 40 8.7
46gb|BC043270.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, m... 40 8.7
47emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4,... 40 8.7
48emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4,... 40 8.7
49gb|AC008467.7| Homo sapiens chromosome 5 clone CTC-364D2, comple... 40 8.7
50dbj|AK091294.1| Homo sapiens cDNA FLJ33975 fis, clone DFNES20028... 40 8.7
51dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
52dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
54gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, r... 40 8.7
55gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, r... 40 8.7
56dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.7
57gb|AC008967.3|AC008967 Homo sapiens chromosome 5 clone CTD-2367A... 40 8.7
58dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
59dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
60dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
61dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
62dbj|AK100577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
63gb|AC154858.2| Mus musculus BAC clone RP23-12P20 from 14, comple... 40 8.7
64emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.7
65gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 10... 40 8.7
66emb|AL832124.1|HSM803431 Homo sapiens mRNA; cDNA DKFZp686C0910 (... 40 8.7 
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                          
Query: 437    aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
              ||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 617527 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 617468

                                           
Query: 497    aagatgagtatcaccctcagcgggcacat 525
              ||||| || ||||||||||||||||||||
Sbjct: 617467 aagattaggatcaccctcagcgggcacat 617439



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                          
Query: 229    tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 288
              |||| |||||||||| |||||| ||||||  ||||||| |||||| || | |||||||||
Sbjct: 619125 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 619066

                                                     
Query: 289    ccgcccgcttgccatgtccaccatcgtccagaatcctgt 327
                 ||| ||||||||||||||||||||||||||||||||
Sbjct: 619065 tttcccacttgccatgtccaccatcgtccagaatcctgt 619027



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 462      ggaggaggaagaagccggcgatggtggcgg 491
                |||||| ||||||| |||||||||||||||
Sbjct: 28096877 ggaggaagaagaagacggcgatggtggcgg 28096906
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>dbj|AK073235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F07, full
           insert sequence
          Length = 922

 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                       
Query: 437 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
           ||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 485 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 426

                                        
Query: 497 aagatgagtatcaccctcagcgggcacat 525
           ||||| || ||||||||||||||||||||
Sbjct: 425 aagattaggatcaccctcagcgggcacat 397



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                       
Query: 229 tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 288
           |||| |||||||||| |||||| ||||||  ||||||| |||||| || | |||||||||
Sbjct: 666 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 607

                                                  
Query: 289 ccgcccgcttgccatgtccaccatcgtccagaatcctgt 327
              ||| ||||||||||||||||||||||||||||||||
Sbjct: 606 tttcccacttgccatgtccaccatcgtccagaatcctgt 568
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                          
Query: 437    aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
              ||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 617527 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 617468

                                           
Query: 497    aagatgagtatcaccctcagcgggcacat 525
              ||||| || ||||||||||||||||||||
Sbjct: 617467 aagattaggatcaccctcagcgggcacat 617439



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                          
Query: 229    tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 288
              |||| |||||||||| |||||| ||||||  ||||||| |||||| || | |||||||||
Sbjct: 619125 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 619066

                                                     
Query: 289    ccgcccgcttgccatgtccaccatcgtccagaatcctgt 327
                 ||| ||||||||||||||||||||||||||||||||
Sbjct: 619065 tttcccacttgccatgtccaccatcgtccagaatcctgt 619027



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 462      ggaggaggaagaagccggcgatggtggcgg 491
                |||||| ||||||| |||||||||||||||
Sbjct: 28081755 ggaggaagaagaagacggcgatggtggcgg 28081784
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                          
Query: 437    aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
              ||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 125445 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 125504

                                           
Query: 497    aagatgagtatcaccctcagcgggcacat 525
              ||||| || ||||||||||||||||||||
Sbjct: 125505 aagattaggatcaccctcagcgggcacat 125533



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                          
Query: 229    tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 288
              |||| |||||||||| |||||| ||||||  ||||||| |||||| || | |||||||||
Sbjct: 123847 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 123906

                                                     
Query: 289    ccgcccgcttgccatgtccaccatcgtccagaatcctgt 327
                 ||| ||||||||||||||||||||||||||||||||
Sbjct: 123907 tttcccacttgccatgtccaccatcgtccagaatcctgt 123945
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                          
Query: 437    aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
              ||||| || ||||||||||||||||||| ||||||||| |||||||| || |||||||||
Sbjct: 655586 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 655527

                                           
Query: 497    aagatgagtatcaccctcagcgggcacat 525
              |||||||| ||||||||||||||||||||
Sbjct: 655526 aagatgaggatcaccctcagcgggcacat 655498



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                          
Query: 237    ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 296
              ||||||| |||||  |||||| |||||||| |||||| || | |||||||||   ||| |
Sbjct: 657147 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 657088

                                             
Query: 297    ttgccatgtccaccatcgtccagaatcctgt 327
              |||||||||||||||||||||||||||||||
Sbjct: 657087 ttgccatgtccaccatcgtccagaatcctgt 657057
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                          
Query: 437    aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
              ||||| || ||||||||||||||||||| ||||||||| |||||||| || |||||||||
Sbjct: 655586 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 655527

                                           
Query: 497    aagatgagtatcaccctcagcgggcacat 525
              |||||||| ||||||||||||||||||||
Sbjct: 655526 aagatgaggatcaccctcagcgggcacat 655498



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                          
Query: 237    ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 296
              ||||||| |||||  |||||| |||||||| |||||| || | |||||||||   ||| |
Sbjct: 657147 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 657088

                                             
Query: 297    ttgccatgtccaccatcgtccagaatcctgt 327
              |||||||||||||||||||||||||||||||
Sbjct: 657087 ttgccatgtccaccatcgtccagaatcctgt 657057
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>emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial sequence from PAC 1 of BAC
            OSJNBb0027O09 of library OSJNBb from chromosome 12 of
            cultivar Nipponbare of ssp. japonica of Oryza sativa
            (rice), complete sequence
          Length = 14570

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                        
Query: 437  aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 496
            ||||| || ||||||||||||||||||| ||||||||| |||||||| || |||||||||
Sbjct: 8732 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 8673

                                         
Query: 497  aagatgagtatcaccctcagcgggcacat 525
            |||||||| ||||||||||||||||||||
Sbjct: 8672 aagatgaggatcaccctcagcgggcacat 8644



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 237   ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 296
             ||||||| |||||  |||||| |||||||| |||||| || | |||||||||   ||| |
Sbjct: 10293 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 10234

                                            
Query: 297   ttgccatgtccaccatcgtccagaatcctgt 327
             |||||||||||||||||||||||||||||||
Sbjct: 10233 ttgccatgtccaccatcgtccagaatcctgt 10203
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>gb|AY106014.1| Zea mays PCO120164 mRNA sequence
          Length = 391

 Score =  107 bits (54), Expect = 4e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 225 ttcgtcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaa 284
           ||||||||||||||||||||||||| || || || ||  | ||||||||||| | ||| |
Sbjct: 240 ttcgtcaccgggccttctcggattccgaattcgcgggctgcgcaacaagggtgcgccaga 299

                                                     
Query: 285 ggtaccgcccgcttgccatgtccaccatcgtccagaatcctg 326
           |||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 300 ggtaacgcccgcttgccatgtccaccatcgtccagaaccctg 341
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>ref|XM_473395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 403 ccccgcgacggcggcggctgcgtcgtc 429
           |||||||||||||||||| ||||||||
Sbjct: 965 ccccgcgacggcggcggcggcgtcgtc 939
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>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
             complete sequence
          Length = 141787

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 403   ccccgcgacggcggcggctgcgtcgtc 429
             |||||||||||||||||| ||||||||
Sbjct: 46115 ccccgcgacggcggcggcggcgtcgtc 46141
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 403      ccccgcgacggcggcggctgcgtcgtc 429
                |||||||||||||||||| ||||||||
Sbjct: 27310187 ccccgcgacggcggcggcggcgtcgtc 27310213



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 408     cgacggcggcggctgcgtcgtcct 431
               ||||||||||||| ||||||||||
Sbjct: 6888810 cgacggcggcggcggcgtcgtcct 6888833
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 463      gaggaggaagaagccggcgatggtggcggag 493
                |||||||| |||||||||||||| |||||||
Sbjct: 10192911 gaggaggaggaagccggcgatggaggcggag 10192881



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 601      cggtgcggcgcggcgtggcg 620
                ||||||||||||||||||||
Sbjct: 32399976 cggtgcggcgcggcgtggcg 32399995
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>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0055M07
          Length = 150901

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 463   gaggaggaagaagccggcgatggtggcggag 493
             |||||||| |||||||||||||| |||||||
Sbjct: 65277 gaggaggaggaagccggcgatggaggcggag 65247
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>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017G06
          Length = 150628

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 463    gaggaggaagaagccggcgatggtggcggag 493
              |||||||| |||||||||||||| |||||||
Sbjct: 140605 gaggaggaggaagccggcgatggaggcggag 140575
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>ref|XM_482592.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1952

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 gatggtggcggagaggaagatg 502
           ||||||||||||||||||||||
Sbjct: 220 gatggtggcggagaggaagatg 241
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>ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016C11.34
           mRNA
          Length = 2061

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 gatggtggcggagaggaagatg 502
           ||||||||||||||||||||||
Sbjct: 314 gatggtggcggagaggaagatg 335
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 462   ggaggaggaagaagccggcgatggtggcgg 491
             |||||| ||||||| |||||||||||||||
Sbjct: 56144 ggaggaagaagaagacggcgatggtggcgg 56173
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 481      gatggtggcggagaggaagatg 502
                ||||||||||||||||||||||
Sbjct: 21307956 gatggtggcggagaggaagatg 21307977
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016C11
          Length = 170723

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 481    gatggtggcggagaggaagatg 502
              ||||||||||||||||||||||
Sbjct: 134233 gatggtggcggagaggaagatg 134254
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>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0524F03
          Length = 167696

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 481  gatggtggcggagaggaagatg 502
            ||||||||||||||||||||||
Sbjct: 7881 gatggtggcggagaggaagatg 7902
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>dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H08, full
           insert sequence
          Length = 1951

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 gatggtggcggagaggaagatg 502
           ||||||||||||||||||||||
Sbjct: 219 gatggtggcggagaggaagatg 240
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>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full
           insert sequence
          Length = 1317

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 462 ggaggaggaagaagccggcgatggtggcgg 491
           |||||| ||||||| |||||||||||||||
Sbjct: 129 ggaggaagaagaagacggcgatggtggcgg 100
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>dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040O12, full
           insert sequence
          Length = 2061

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 gatggtggcggagaggaagatg 502
           ||||||||||||||||||||||
Sbjct: 314 gatggtggcggagaggaagatg 335
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>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c),
           complete cds, clone:C12024
          Length = 1148

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 462 ggaggaggaagaagccggcgatggtggcgg 491
           |||||| ||||||| |||||||||||||||
Sbjct: 81  ggaggaagaagaagacggcgatggtggcgg 52
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>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence
          Length = 278715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 520    gcacatctctaatcaaccaag 540
              |||||||||||||||||||||
Sbjct: 106577 gcacatctctaatcaaccaag 106597
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>emb|BX649321.4| Zebrafish DNA sequence from clone DKEY-242D22 in linkage group 1,
             complete sequence
          Length = 89729

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    atacgtaaacaatttggcaca 92
             |||||||||||||||||||||
Sbjct: 59422 atacgtaaacaatttggcaca 59442
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 467    aggaagaagccggcgatggtggcgg 491
              ||||||||||||||| |||||||||
Sbjct: 509413 aggaagaagccggcggtggtggcgg 509437
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>gb|AE004535.1| Pseudomonas aeruginosa PAO1, section 96 of 529 of the complete genome
          Length = 11431

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 426  cgtcctggaacaggtccggctcggc 450
            ||||||||||||||| |||||||||
Sbjct: 8280 cgtcctggaacaggttcggctcggc 8256
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>emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in linkage group 1,
              complete sequence
          Length = 214441

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     atacgtaaacaatttggcaca 92
              |||||||||||||||||||||
Sbjct: 173143 atacgtaaacaatttggcaca 173123
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>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence
          Length = 23480

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   cggcgttgaggccccggaggagga 470
             ||||| ||||||||||||||||||
Sbjct: 12772 cggcggtgaggccccggaggagga 12795
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>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   cccatgttacaacttacaactgcc 139
             ||||||| ||||||||||||||||
Sbjct: 88214 cccatgtgacaacttacaactgcc 88237
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>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
              complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 600    gcggtgcggcgcggcgtggcgaga 623
              |||| |||||||||||||||||||
Sbjct: 132046 gcggcgcggcgcggcgtggcgaga 132069
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>ref|XM_474818.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 cgacggcggcggctgcgtcgtcct 431
           ||||||||||||| ||||||||||
Sbjct: 73  cgacggcggcggcggcgtcgtcct 50
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>ref|XM_467985.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 601 cggtgcggcgcggcgtggcg 620
           ||||||||||||||||||||
Sbjct: 62  cggtgcggcgcggcgtggcg 43
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
            complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 600  gcggtgcggcgcggcgtggcgaga 623
            |||| |||||||||||||||||||
Sbjct: 3811 gcggcgcggcgcggcgtggcgaga 3834
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>ref|XM_324156.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial
            mRNA
          Length = 3285

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  gaggaggaagaagccggcga 482
            ||||||||||||||||||||
Sbjct: 2538 gaggaggaagaagccggcga 2519
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>ref|XM_955333.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial
            mRNA
          Length = 3285

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  gaggaggaagaagccggcga 482
            ||||||||||||||||||||
Sbjct: 2538 gaggaggaagaagccggcga 2519
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 447     cggcgttgaggccccggaggagga 470
               ||||| ||||||||||||||||||
Sbjct: 7468668 cggcggtgaggccccggaggagga 7468691
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>ref|XM_846295.1| PREDICTED: Canis familiaris similar to cytochrome P450, family 11,
            subfamily B, polypeptide 1 isoform 1 precursor
            (LOC609093), mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  gaggccccggaggaggaaga 473
            ||||||||||||||||||||
Sbjct: 1177 gaggccccggaggaggaaga 1196
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>ref|XM_845533.1| PREDICTED: Canis familiaris similar to cytochrome P450, subfamily
           XIB polypeptide 2 precursor (LOC608494), partial mRNA
          Length = 1439

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 gaggccccggaggaggaaga 473
           ||||||||||||||||||||
Sbjct: 927 gaggccccggaggaggaaga 946
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>gb|AC079306.7| Homo sapiens BAC clone CTD-2506A20 from 7, complete sequence
          Length = 70638

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   catccccattctggcactcc 204
             ||||||||||||||||||||
Sbjct: 62513 catccccattctggcactcc 62532
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>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 447    cggcgttgaggccccggaggagga 470
              ||||| ||||||||||||||||||
Sbjct: 107223 cggcggtgaggccccggaggagga 107246
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>gb|AC127579.4| Mus musculus BAC clone RP23-434O19 from chromosome 14, complete
            sequence
          Length = 181361

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cacaagatgtaaccaaaaca 170
            ||||||||||||||||||||
Sbjct: 9865 cacaagatgtaaccaaaaca 9846
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>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6,
            complete sequence
          Length = 216472

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  gaggccccggaggaggaaga 473
            ||||||||||||||||||||
Sbjct: 7898 gaggccccggaggaggaaga 7879
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>ref|XM_961986.1| PREDICTED: Tribolium castaneum similar to CG9484-PA (LOC655442), mRNA
          Length = 8550

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 472  gaagccggcgatggtggcgg 491
            ||||||||||||||||||||
Sbjct: 1778 gaagccggcgatggtggcgg 1759
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>gb|BC043270.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6, mRNA
           (cDNA clone IMAGE:5297025), complete cds
          Length = 3299

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 catccccattctggcactcc 204
           ||||||||||||||||||||
Sbjct: 542 catccccattctggcactcc 561
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>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    cgacggcggcggctgcgtcgtcct 431
              ||||||||||||| ||||||||||
Sbjct: 167139 cgacggcggcggcggcgtcgtcct 167162
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>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
             complete sequence
          Length = 149134

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   cgacggcggcggctgcgtcgtcct 431
             ||||||||||||| ||||||||||
Sbjct: 51681 cgacggcggcggcggcgtcgtcct 51704
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>gb|AC008467.7| Homo sapiens chromosome 5 clone CTC-364D2, complete sequence
          Length = 106729

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 180   caaatcatccccattctggcactccagt 207
             |||| ||||||||| |||||||||||||
Sbjct: 75266 caaaccatccccatcctggcactccagt 75239
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>dbj|AK091294.1| Homo sapiens cDNA FLJ33975 fis, clone DFNES2002817, moderately
           similar to Mouse mRNA for RNA polymerase I associated
           factor (PAF53)
          Length = 2229

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 catccccattctggcactcc 204
           ||||||||||||||||||||
Sbjct: 441 catccccattctggcactcc 460
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      atgttacaacttacaactgc 138
                ||||||||||||||||||||
Sbjct: 16242369 atgttacaacttacaactgc 16242350
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 600      gcggtgcggcgcggcgtggcgaga 623
                |||| |||||||||||||||||||
Sbjct: 25269205 gcggcgcggcgcggcgtggcgaga 25269228
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 447     cggcgttgaggccccggaggagga 470
               ||||| ||||||||||||||||||
Sbjct: 7466503 cggcggtgaggccccggaggagga 7466526
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>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone
             BACR09F18, complete sequence
          Length = 182525

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 459   cccggaggaggaagaagccggcga 482
             |||||||||||||||||| |||||
Sbjct: 41873 cccggaggaggaagaagcaggcga 41850
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>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone
              BACR14L13, complete sequence
          Length = 197348

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 459    cccggaggaggaagaagccggcga 482
              |||||||||||||||||| |||||
Sbjct: 196573 cccggaggaggaagaagcaggcga 196550
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    gaagccggcgatggtggcgg 491
              ||||||||||||||||||||
Sbjct: 818491 gaagccggcgatggtggcgg 818472
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>gb|AC008967.3|AC008967 Homo sapiens chromosome 5 clone CTD-2367A17, complete sequence
          Length = 88958

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   agatgtaaccaaaacagatacaat 178
             |||||||| |||||||||||||||
Sbjct: 39750 agatgtaatcaaaacagatacaat 39727
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1344_B01
          Length = 170912

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   atgttacaacttacaactgc 138
             ||||||||||||||||||||
Sbjct: 58885 atgttacaacttacaactgc 58866
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0556H01
          Length = 149800

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    atgttacaacttacaactgc 138
              ||||||||||||||||||||
Sbjct: 146970 atgttacaacttacaactgc 146951
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>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1767_D02
          Length = 139145

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 601   cggtgcggcgcggcgtggcg 620
             ||||||||||||||||||||
Sbjct: 61489 cggtgcggcgcggcgtggcg 61508
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>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1079_F11
          Length = 122402

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 601  cggtgcggcgcggcgtggcg 620
            ||||||||||||||||||||
Sbjct: 3369 cggtgcggcgcggcgtggcg 3388
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>dbj|AK100577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H18, full
            insert sequence
          Length = 2420

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  atgttacaacttacaactgc 138
            ||||||||||||||||||||
Sbjct: 2380 atgttacaacttacaactgc 2361
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>gb|AC154858.2| Mus musculus BAC clone RP23-12P20 from 14, complete sequence
          Length = 180592

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cacaagatgtaaccaaaaca 170
             ||||||||||||||||||||
Sbjct: 73578 cacaagatgtaaccaaaaca 73597
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   cgacggcggcggctgcgtcgtcct 431
             ||||||||||||| ||||||||||
Sbjct: 80468 cgacggcggcggcggcgtcgtcct 80491
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>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete
              sequence
          Length = 239049

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 459    cccggaggaggaagaagccggcga 482
              |||||||||||||||||| |||||
Sbjct: 172252 cccggaggaggaagaagcaggcga 172229
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>emb|AL832124.1|HSM803431 Homo sapiens mRNA; cDNA DKFZp686C0910 (from clone DKFZp686C0910)
          Length = 5249

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  catccccattctggcactcc 204
            ||||||||||||||||||||
Sbjct: 2431 catccccattctggcactcc 2450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,875,485
Number of Sequences: 3902068
Number of extensions: 4875485
Number of successful extensions: 124495
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122534
Number of HSP's gapped (non-prelim): 1960
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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