ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3k08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
2gb|AY105182.1| Zea mays PCO117620 mRNA sequence 291 1e-75
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
4dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
5dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response fac... 131 3e-27
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
8dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
9dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
10gb|AY110307.1| Zea mays CL18202_1 mRNA sequence 50 0.009
11ref|XM_483368.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
12dbj|AB071297.1| Oryza sativa OsARF7b mRNA for auxin response fac... 46 0.15
13gb|AC109266.24| Mus musculus chromosome 16, clone RP23-176C2, co... 44 0.59
14gb|AY137966.1| Mirabilis jalapa clone SM-01 auxin-responsive fac... 44 0.59
15emb|AL009173.2|HS32F7 Human DNA sequence from clone RP1-32F7 on ... 44 0.59
16ref|XM_779874.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.59
17gb|AC026394.11| Homo sapiens chromosome 10 clone RP11-427O20, co... 44 0.59
18dbj|BS000120.2| Pan troglodytes chromosome 22 clone:RP43-007D11,... 44 0.59
19dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.59
20gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome... 44 0.59
21dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 44 0.59
22dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 44 0.59
23dbj|AP000009.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 44 0.59
24dbj|D83253.1| Homo sapiens genomic DNA, chromosome 21q22.2, p1 c... 44 0.59
25gb|U53672.2|ATU53672 Arabidopsis thaliana early auxin-induced IA... 42 2.3
26ref|NM_101780.1| Arabidopsis thaliana ARF19; transcription facto... 42 2.3
27ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE FACTO... 42 2.3
28gb|DQ153984.1| Gossypium arboreum auxin response factor 2 (ARF2)... 42 2.3
29gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, com... 42 2.3
30gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, co... 42 2.3
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
32gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Canc... 42 2.3
33dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
34dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
35emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chro... 42 2.3
36dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.3
37emb|AJ441312.1|ATH441312 Arabidopsis thaliana mRNA for early aux... 42 2.3
38emb|CR384061.4| Zebrafish DNA sequence from clone CH211-182E10 i... 42 2.3
39dbj|AK059543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
40gb|AC153591.4| Mus musculus 6 BAC RP23-301O22 (Roswell Park Canc... 42 2.3
41gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response facto... 42 2.3
42gb|AY669794.1| Arabidopsis thaliana clone C105352 ARF19 (At1g192... 42 2.3
43gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5g3702... 42 2.3
44ref|XM_632536.1| Dictyostelium discoideum hypothetical protein (... 40 9.1
45gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 ma... 40 9.1
46gb|AC149265.1| Solanum demissum chromosome 5 clone PGEC858M02 ma... 40 9.1
47gb|AY730339.1| Solanum tuberosum strain P6/210 clone BAC BA76o11... 40 9.1
48gb|AC134415.8| Mus musculus chromosome 3, clone RP24-224P21, com... 40 9.1
49gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, co... 40 9.1
50gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete s... 40 9.1
51gb|AY662481.1| Feline leukemia virus clone 1110-32 envelope prec... 40 9.1
52gb|AY662480.1| Feline leukemia virus clone 1110-31 envelope prec... 40 9.1
53gb|AY662479.1| Feline leukemia virus clone 1110-30 envelope prec... 40 9.1
54gb|AY662478.1| Feline leukemia virus clone 1110-25 envelope prec... 40 9.1
55gb|AY662477.1| Feline leukemia virus clone 1110-24 envelope prec... 40 9.1
56gb|AC147788.1| Latimeria menadoensis clone VMRC4-19C10, complete... 40 9.1
57gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome ... 40 9.1
58gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, co... 40 9.1
59emb|AL929410.7| Human DNA sequence from clone RP11-234P3 on chro... 40 9.1
60emb|AL391114.12| Human DNA sequence from clone RP11-332A4 on chr... 40 9.1
61emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chr... 40 9.1
62emb|AL139244.21| Human DNA sequence from clone RP5-1043G4 on chr... 40 9.1
63emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chro... 40 9.1
64gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, co... 40 9.1
65gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Canc... 40 9.1
66emb|AL133541.21| Human DNA sequence from clone RP1-126E20 on chr... 40 9.1
67gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 40 9.1
68emb|AL031368.2|HS662N3 Human DNA sequence from clone RP4-662N3 o... 40 9.1
69emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in... 40 9.1
70emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in... 40 9.1
71gb|AC099567.2| Homo sapiens chromosome 1 clone RP5-936J12, compl... 40 9.1
72gb|AC009717.15| Homo sapiens chromosome 18, clone RP11-534N16, c... 40 9.1
73gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence 40 9.1
74gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, co... 40 9.1
75gb|AC105221.3| Homo sapiens chromosome 18, clone RP11-480N3, com... 40 9.1
76gb|AC055740.17| Homo sapiens 3 BAC RP11-239J2 (Roswell Park Canc... 40 9.1
77dbj|AK222303.1| Ciona intestinalis cDNA, clone:ciad096p21, full ... 40 9.1
78gb|AC096773.3| Homo sapiens BAC clone RP11-810P8 from 4, complet... 40 9.1
79gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, co... 40 9.1
80gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, comple... 40 9.1
81gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complet... 40 9.1
82emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in... 40 9.1
83emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 i... 40 9.1
84gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, comp... 40 9.1
85gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosom... 40 9.1
86gb|AC037433.6|AC037433 Homo sapiens chromosome 15, clone RP11-92... 40 9.1
87dbj|AB210806.1| Ciona intestinalis mRNA for zinc finger protein,... 40 9.1
88gb|M12500.1|FCVGLENV Feline leukemia virus envelope protein gene... 40 9.1
89gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complet... 40 9.1
90gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, comple... 40 9.1
91gb|AC004962.1|AC004962 Homo sapiens PAC clone RP5-1099N7 from 1,... 40 9.1
92gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, comple... 40 9.1
93gb|AC068276.7| Homo sapiens BAC clone RP11-127H13 from 2, comple... 40 9.1
94ref|XM_573634.1| PREDICTED: Rattus norvegicus Huntington disease... 40 9.1
95gb|AC008243.6|AC008243 Homo sapiens, clone RP11-45L9, complete s... 40 9.1
96dbj|AB083077.1| Oryzias latipes DNA, globin gene cluster region 40 9.1
97gb|AC009891.2|AC009891 Genomic Sequence for Homo sapiens clone H... 40 9.1
98emb|AL929391.10| Zebrafish DNA sequence from clone CH211-155I14 ... 40 9.1
99dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.1
100dbj|AP000821.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.1
101dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 9.1
102dbj|AP001541.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.1
103dbj|AP001284.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.1
104gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.70... 40 9.1
105gb|AF052723.1|AF052723 Feline leukemia virus strain Rickard subg... 40 9.1
106gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complet... 40 9.1
107gb|M23026.1|FCSGP70B Feline sarcoma virus (GA-FeSV) deletion mut... 40 9.1
108gb|AC000113.1|HSAC000113 Human PAC clone DJ302C05 from Xq23, com... 40 9.1
109gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product m... 40 9.1
110gb|L25630.1|FCVFELVAA Feline Leukemia Virus DNA sequence 40 9.1
111gb|M89999.1|FCVGP70B Feline leukemia virus external glycoprotein... 40 9.1
112gb|M89998.1|FCVGP70A Feline leukemia virus external glycoprotein... 40 9.1
113gb|M18248.1|FCVF3A Feline leukemia virus, subgroup A (FeLV-3281-... 40 9.1
114gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, c... 40 9.1 
>ref|XM_464101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3420

 Score =  297 bits (150), Expect = 2e-77
 Identities = 243/274 (88%)
 Strand = Plus / Minus

                                                                        
Query: 396  tcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacgagg 455
            |||||||||||| ||||| |||||||||||||||||||||| |||||||||  | |||||
Sbjct: 3420 tcattcgaattgatcatacgggccgatggaagggttcccggggttctggtcacagcgagg 3361

                                                                        
Query: 456  cttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctccc 515
            | |||||  |||| | ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3360 cctccaaccattcaccccatctgagctgctgcaagcctggttggggaggacattgctccc 3301

                                                                        
Query: 516  caaatcaccatccaggctcatcttttgcacttcttgaggggataggatcctaatgcactt 575
            || ||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||  |
Sbjct: 3300 cagatcaccatccaagctcatctgttgcacttcttgaggtgatagaatcctaatgcatct 3241

                                                                        
Query: 576  aacgcaattcacaaactcctcccatgggtcatcaccaagaagtaggacgtcgtcctcatg 635
             || || ||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||
Sbjct: 3240 tacacagttcacaaactcctcccatgggtcatcaccaagaagcaggatgtcatcctcgtg 3181

                                              
Query: 636  atctgtgtagactagcttccaacctattctctgt 669
            |||  ||||||| || ||||| ||||||||||||
Sbjct: 3180 atccttgtagaccagtttccagcctattctctgt 3147
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>gb|AY105182.1| Zea mays PCO117620 mRNA sequence
          Length = 671

 Score =  291 bits (147), Expect = 1e-75
 Identities = 231/259 (89%)
 Strand = Plus / Minus

                                                                       
Query: 391 tcaggtcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaa 450
           |||||||| || |||||||| |||   |||||||||||||| || | ||||||||||   
Sbjct: 259 tcaggtcactcaaattggtcgtagaacccgatggaagggttaccagggttctggtcgcgg 200

                                                                       
Query: 451 cgaggcttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattg 510
           ||||||||||| | |||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 199 cgaggcttccaggcattcccaccatctgagctgctgcaagcctggttggagaggacattg 140

                                                                       
Query: 511 ctccccaaatcaccatccaggctcatcttttgcacttcttgaggggataggatcctaatg 570
            |||||||||||||||| | ||||||||  ||||||||||| ||||||||||||||||||
Sbjct: 139 ttccccaaatcaccatctaagctcatctgctgcacttcttggggggataggatcctaatg 80

                                                                       
Query: 571 cacttaacgcaattcacaaactcctcccatgggtcatcaccaagaagtaggacgtcgtcc 630
           ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 79  cacttcacacaattcacaaactcctcccatgggtcgtcaccaagaagtaggacgtcatcc 20

                              
Query: 631 tcatgatctgtgtagacta 649
           |||||||| ||||||||||
Sbjct: 19  tcatgatccgtgtagacta 1
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  262 bits (132), Expect = 1e-66
 Identities = 201/224 (89%)
 Strand = Plus / Plus

                                                                           
Query: 371     tatgtgaatgcacctctaagtcaggtcattcgaattggtcataggggccgatggaagggt 430
               |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 2207996 tatgtgaatgaacctctaagtcaggtcattcgaattgatcatacgggccgatggaagggt 2208055

                                                                           
Query: 431     tcccggagttctggtcgtaacgaggcttccaagtattccctccatctgagctgctgcaag 490
               |||||| |||||||||  | |||||| |||||  |||| | |||||||||||||||||||
Sbjct: 2208056 tcccggggttctggtcacagcgaggcctccaaccattcaccccatctgagctgctgcaag 2208115

                                                                           
Query: 491     cctggttgggcaggacattgctccccaaatcaccatccaggctcatcttttgcacttctt 550
               |||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 2208116 cctggttggggaggacattgctccccagatcaccatccaagctcatctgttgcacttctt 2208175

                                                           
Query: 551     gaggggataggatcctaatgcacttaacgcaattcacaaactcc 594
               |||| ||||| |||||||||||  | || || ||||||||||||
Sbjct: 2208176 gaggtgatagaatcctaatgcatcttacacagttcacaaactcc 2208219



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                           
Query: 594     ctcccatgggtcatcaccaagaagtaggacgtcgtcctcatgatctgtgtagactagctt 653
               |||||||||||||||||||||||| |||| ||| ||||| |||||  ||||||| || ||
Sbjct: 2208483 ctcccatgggtcatcaccaagaagcaggatgtcatcctcgtgatccttgtagaccagttt 2208542

                               
Query: 654     ccaacctattctctgt 669
               ||| ||||||||||||
Sbjct: 2208543 ccagcctattctctgt 2208558



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 209     tctgaggagcattttccctcacagctataagctgac 244
               |||||||||||||| ||||| |||||||||||||||
Sbjct: 2207816 tctgaggagcatttgccctcccagctataagctgac 2207851
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1679_B08
          Length = 142529

 Score =  262 bits (132), Expect = 1e-66
 Identities = 201/224 (89%)
 Strand = Plus / Plus

                                                                          
Query: 371    tatgtgaatgcacctctaagtcaggtcattcgaattggtcataggggccgatggaagggt 430
              |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 122689 tatgtgaatgaacctctaagtcaggtcattcgaattgatcatacgggccgatggaagggt 122748

                                                                          
Query: 431    tcccggagttctggtcgtaacgaggcttccaagtattccctccatctgagctgctgcaag 490
              |||||| |||||||||  | |||||| |||||  |||| | |||||||||||||||||||
Sbjct: 122749 tcccggggttctggtcacagcgaggcctccaaccattcaccccatctgagctgctgcaag 122808

                                                                          
Query: 491    cctggttgggcaggacattgctccccaaatcaccatccaggctcatcttttgcacttctt 550
              |||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 122809 cctggttggggaggacattgctccccagatcaccatccaagctcatctgttgcacttctt 122868

                                                          
Query: 551    gaggggataggatcctaatgcacttaacgcaattcacaaactcc 594
              |||| ||||| |||||||||||  | || || ||||||||||||
Sbjct: 122869 gaggtgatagaatcctaatgcatcttacacagttcacaaactcc 122912



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 594    ctcccatgggtcatcaccaagaagtaggacgtcgtcctcatgatctgtgtagactagctt 653
              |||||||||||||||||||||||| |||| ||| ||||| |||||  ||||||| || ||
Sbjct: 123176 ctcccatgggtcatcaccaagaagcaggatgtcatcctcgtgatccttgtagaccagttt 123235

                              
Query: 654    ccaacctattctctgt 669
              ||| ||||||||||||
Sbjct: 123236 ccagcctattctctgt 123251



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 209    tctgaggagcattttccctcacagctataagctgac 244
              |||||||||||||| ||||| |||||||||||||||
Sbjct: 122509 tctgaggagcatttgccctcccagctataagctgac 122544
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>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
            insert sequence
          Length = 3550

 Score =  135 bits (68), Expect = 2e-28
 Identities = 226/278 (81%), Gaps = 3/278 (1%)
 Strand = Plus / Minus

                                                                        
Query: 394  ggtcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacga 453
            |||||||||||||| ||||| |  ||  |||||||||| ||||||||||| ||| | |||
Sbjct: 3289 ggtcattcgaattgttcatatgaaccattggaagggttaccggagttctgatcgcagcga 3230

                                                                        
Query: 454  ggcttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctc 513
            | | |||| | ||||||||| |||||||||||||| ||||| || ||  | |  ||| ||
Sbjct: 3229 gccctccatgcattccctccgtctgagctgctgcaggcctgattcgggggaatgttgttc 3170

                                                                        
Query: 514  cccaaatcacca---tccaggctcatcttttgcacttcttgaggggataggatcctaatg 570
            || | ||||| |   |||| ||||||||  || ||||||||||| || ||||||||||||
Sbjct: 3169 ccgagatcacaaccctccaagctcatctgctgaacttcttgaggtgaaaggatcctaatg 3110

                                                                        
Query: 571  cacttaacgcaattcacaaactcctcccatgggtcatcaccaagaagtaggacgtcgtcc 630
            || || ||||||   ||||| |||||||||||||| || ||||||||||||| ||| || 
Sbjct: 3109 catttcacgcaaccgacaaattcctcccatgggtcgtcgccaagaagtaggatgtcatct 3050

                                                  
Query: 631  tcatgatctgtgtagactagcttccaacctattctctg 668
            ||||||||  |||| || ||||||||||| ||||||||
Sbjct: 3049 tcatgatccttgtaaacgagcttccaaccaattctctg 3012
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>dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds
          Length = 3372

 Score =  131 bits (66), Expect = 3e-27
 Identities = 224/276 (81%), Gaps = 3/276 (1%)
 Strand = Plus / Minus

                                                                        
Query: 396  tcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacgagg 455
            |||||||||||| ||||| |  ||  |||||||||| ||||||||||| ||| | |||| 
Sbjct: 3372 tcattcgaattgttcatatgaaccattggaagggttaccggagttctgatcgcagcgagc 3313

                                                                        
Query: 456  cttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctccc 515
            | |||| | ||||||||| |||||||||||||| ||||| || ||  | |  ||| ||||
Sbjct: 3312 cctccatgcattccctccgtctgagctgctgcaggcctgattcgggggaatgttgttccc 3253

                                                                        
Query: 516  caaatcacca---tccaggctcatcttttgcacttcttgaggggataggatcctaatgca 572
             | ||||| |   |||| ||||||||  || ||||||||||| || ||||||||||||||
Sbjct: 3252 gagatcacaaccctccaagctcatctgctgaacttcttgaggtgaaaggatcctaatgca 3193

                                                                        
Query: 573  cttaacgcaattcacaaactcctcccatgggtcatcaccaagaagtaggacgtcgtcctc 632
             || ||||||   ||||| |||||||||||||| || ||||||||||||| ||| || ||
Sbjct: 3192 tttcacgcaaccgacaaattcctcccatgggtcgtcgccaagaagtaggatgtcatcttc 3133

                                                
Query: 633  atgatctgtgtagactagcttccaacctattctctg 668
            ||||||  |||| || ||||||||||| ||||||||
Sbjct: 3132 atgatccttgtaaacgagcttccaaccaattctctg 3097
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 154/192 (80%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                            
Query: 394      ggtcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacga 453
                |||||||||||||| ||||| |  ||  |||||||||| ||||||||||| ||| | |||
Sbjct: 29148900 ggtcattcgaattgttcatatgaaccattggaagggttaccggagttctgatcgcagcga 29148841

                                                                            
Query: 454      ggcttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctc 513
                | | |||| | ||||||||| |||||||||||||| ||||| || ||  | |  ||| ||
Sbjct: 29148840 gccctccatgcattccctccgtctgagctgctgcaggcctgattcgggggaatgttgttc 29148781

                                                                            
Query: 514      cccaaatc---accatccaggctcatcttttgcacttcttgaggggataggatcctaatg 570
                || | |||   ||| |||| ||||||||  || ||||||||||| || ||||||||||||
Sbjct: 29148780 ccgagatcacaaccctccaagctcatctgctgaacttcttgaggtgaaaggatcctaatg 29148721

                            
Query: 571      cacttaacgcaa 582
                || || ||||||
Sbjct: 29148720 catttcacgcaa 29148709



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                            
Query: 594      ctcccatgggtcatcaccaagaagtaggacgtcgtcctcatgatctgtgtagactagctt 653
                |||||||||||| || ||||||||||||| ||| || ||||||||  |||| || |||||
Sbjct: 29148530 ctcccatgggtcgtcgccaagaagtaggatgtcatcttcatgatccttgtaaacgagctt 29148471

                               
Query: 654      ccaacctattctctg 668
                |||||| ||||||||
Sbjct: 29148470 ccaaccaattctctg 29148456
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0596H10
          Length = 166570

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 154/192 (80%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                          
Query: 394    ggtcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacga 453
              |||||||||||||| ||||| |  ||  |||||||||| ||||||||||| ||| | |||
Sbjct: 163887 ggtcattcgaattgttcatatgaaccattggaagggttaccggagttctgatcgcagcga 163828

                                                                          
Query: 454    ggcttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctc 513
              | | |||| | ||||||||| |||||||||||||| ||||| || ||  | |  ||| ||
Sbjct: 163827 gccctccatgcattccctccgtctgagctgctgcaggcctgattcgggggaatgttgttc 163768

                                                                          
Query: 514    cccaaatc---accatccaggctcatcttttgcacttcttgaggggataggatcctaatg 570
              || | |||   ||| |||| ||||||||  || ||||||||||| || ||||||||||||
Sbjct: 163767 ccgagatcacaaccctccaagctcatctgctgaacttcttgaggtgaaaggatcctaatg 163708

                          
Query: 571    cacttaacgcaa 582
              || || ||||||
Sbjct: 163707 catttcacgcaa 163696



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                          
Query: 594    ctcccatgggtcatcaccaagaagtaggacgtcgtcctcatgatctgtgtagactagctt 653
              |||||||||||| || ||||||||||||| ||| || ||||||||  |||| || |||||
Sbjct: 163517 ctcccatgggtcgtcgccaagaagtaggatgtcatcttcatgatccttgtaaacgagctt 163458

                             
Query: 654    ccaacctattctctg 668
              |||||| ||||||||
Sbjct: 163457 ccaaccaattctctg 163443
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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 154/192 (80%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                         
Query: 394   ggtcattcgaattggtcataggggccgatggaagggttcccggagttctggtcgtaacga 453
             |||||||||||||| ||||| |  ||  |||||||||| ||||||||||| ||| | |||
Sbjct: 16187 ggtcattcgaattgttcatatgaaccattggaagggttaccggagttctgatcgcagcga 16128

                                                                         
Query: 454   ggcttccaagtattccctccatctgagctgctgcaagcctggttgggcaggacattgctc 513
             | | |||| | ||||||||| |||||||||||||| ||||| || ||  | |  ||| ||
Sbjct: 16127 gccctccatgcattccctccgtctgagctgctgcaggcctgattcgggggaatgttgttc 16068

                                                                         
Query: 514   cccaaatc---accatccaggctcatcttttgcacttcttgaggggataggatcctaatg 570
             || | |||   ||| |||| ||||||||  || ||||||||||| || ||||||||||||
Sbjct: 16067 ccgagatcacaaccctccaagctcatctgctgaacttcttgaggtgaaaggatcctaatg 16008

                         
Query: 571   cacttaacgcaa 582
             || || ||||||
Sbjct: 16007 catttcacgcaa 15996



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                         
Query: 594   ctcccatgggtcatcaccaagaagtaggacgtcgtcctcatgatctgtgtagactagctt 653
             |||||||||||| || ||||||||||||| ||| || ||||||||  |||| || |||||
Sbjct: 15817 ctcccatgggtcgtcgccaagaagtaggatgtcatcttcatgatccttgtaaacgagctt 15758

                            
Query: 654   ccaacctattctctg 668
             |||||| ||||||||
Sbjct: 15757 ccaaccaattctctg 15743
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>gb|AY110307.1| Zea mays CL18202_1 mRNA sequence
          Length = 655

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 577 acgcaattcacaaactcctcccatgggtcatcaccaa 613
           ||||| ||||| || ||||||||||||||||||||||
Sbjct: 455 acgcagttcacgaagtcctcccatgggtcatcaccaa 491
to top
>ref|XM_483368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3342

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 583  ttcacaaactcctcccatgggtcatcaccaa 613
            |||||||| ||||||||||| ||||||||||
Sbjct: 3200 ttcacaaagtcctcccatggatcatcaccaa 3170



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 472  ccatctgagctgctgcaagcctggttggg 500
            ||||| |||||||||||||| ||||||||
Sbjct: 3311 ccatcagagctgctgcaagcttggttggg 3283
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>dbj|AB071297.1| Oryza sativa OsARF7b mRNA for auxin response factor 7b, partial cds
          Length = 3291

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 583  ttcacaaactcctcccatgggtcatcaccaa 613
            |||||||| ||||||||||| ||||||||||
Sbjct: 3149 ttcacaaagtcctcccatggatcatcaccaa 3119



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 472  ccatctgagctgctgcaagcctggttggg 500
            ||||| |||||||||||||| ||||||||
Sbjct: 3260 ccatcagagctgctgcaagcttggttggg 3232
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>gb|AC109266.24| Mus musculus chromosome 16, clone RP23-176C2, complete sequence
          Length = 171797

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 359  taaaatgacagctatgtgaatg 380
            ||||||||||||||||||||||
Sbjct: 9361 taaaatgacagctatgtgaatg 9340
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>gb|AY137966.1| Mirabilis jalapa clone SM-01 auxin-responsive factor protein mRNA,
           partial cds
          Length = 410

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 544 acttcttgaggggataggatcc 565
           ||||||||||||||||||||||
Sbjct: 410 acttcttgaggggataggatcc 389
to top
>emb|AL009173.2|HS32F7 Human DNA sequence from clone RP1-32F7 on chromosome Xq21.2-21.33
             Contains the NAP1L3 gene for nucleosome assembly protein
             1-like 3, the FLJ37659 gene and a CpG island, complete
             sequence
          Length = 101167

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 181   ctacatatatatccaaaagaaa 202
             ||||||||||||||||||||||
Sbjct: 28426 ctacatatatatccaaaagaaa 28447
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>ref|XM_779874.1| PREDICTED: Strongylocentrotus purpuratus similar to slit homolog 1
           (LOC579778), mRNA
          Length = 693

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 373 tgtgaatgcacctctaagtcag 394
           ||||||||||||||||||||||
Sbjct: 460 tgtgaatgcacctctaagtcag 481
to top
>gb|AC026394.11| Homo sapiens chromosome 10 clone RP11-427O20, complete sequence
          Length = 174186

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 182   tacatatatatccaaaagaaaa 203
             ||||||||||||||||||||||
Sbjct: 39610 tacatatatatccaaaagaaaa 39631
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>dbj|BS000120.2| Pan troglodytes chromosome 22 clone:RP43-007D11, map 22, complete
              sequences
          Length = 219802

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    ctacatatatatccaaaagaaa 202
              ||||||||||||||||||||||
Sbjct: 161883 ctacatatatatccaaaagaaa 161862
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>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   ctacatatatatccaaaagaaa 202
             ||||||||||||||||||||||
Sbjct: 58161 ctacatatatatccaaaagaaa 58140
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>gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome 16, complete sequence
          Length = 183487

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 359    taaaatgacagctatgtgaatg 380
              ||||||||||||||||||||||
Sbjct: 175681 taaaatgacagctatgtgaatg 175660
to top
>dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T1601, complete
             sequence
          Length = 102247

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   ctacatatatatccaaaagaaa 202
             ||||||||||||||||||||||
Sbjct: 25556 ctacatatatatccaaaagaaa 25535
to top
>dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 3/16, complete sequence
          Length = 100000

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   ctacatatatatccaaaagaaa 202
             ||||||||||||||||||||||
Sbjct: 27578 ctacatatatatccaaaagaaa 27557
to top
>dbj|AP000009.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 2/13
          Length = 152345

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    ctacatatatatccaaaagaaa 202
              ||||||||||||||||||||||
Sbjct: 127578 ctacatatatatccaaaagaaa 127557
to top
>dbj|D83253.1| Homo sapiens genomic DNA, chromosome 21q22.2, p1 clone: T1212 and T1601,
              complete sequence
          Length = 110174

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    ctacatatatatccaaaagaaa 202
              ||||||||||||||||||||||
Sbjct: 109600 ctacatatatatccaaaagaaa 109579
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>gb|U53672.2|ATU53672 Arabidopsis thaliana early auxin-induced IAA22 mRNA, complete cds
          Length = 3807

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 577  acgcaattcacaaactcctcccatgggtcatcaccaa 613
            ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 3313 acgcagttcacaaactcttcccaaggatcatcaccaa 3277
to top
>ref|NM_101780.1| Arabidopsis thaliana ARF19; transcription factor AT1G19220 (ARF19)
            mRNA, complete cds
          Length = 3588

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 577  acgcaattcacaaactcctcccatgggtcatcaccaa 613
            ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 3095 acgcagttcacaaactcttcccaaggatcatcaccaa 3059
to top
>ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE FACTOR 8); transcription
            factor AT5G37020 (ARF8) mRNA, complete cds
          Length = 2840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 594  ctcccatgggtcatcaccaag 614
            |||||||||||||||||||||
Sbjct: 2442 ctcccatgggtcatcaccaag 2422
to top
>gb|DQ153984.1| Gossypium arboreum auxin response factor 2 (ARF2) mRNA, complete cds
          Length = 3723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 588  aaactcctcccatgggtcatc 608
            |||||||||||||||||||||
Sbjct: 3283 aaactcctcccatgggtcatc 3263
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>gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, complete sequence
          Length = 193803

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   catatatatccaaaagaaaag 204
             |||||||||||||||||||||
Sbjct: 94468 catatatatccaaaagaaaag 94448
to top
>gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, complete sequence
          Length = 177761

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   catatatatccaaaagaaaag 204
             |||||||||||||||||||||
Sbjct: 25601 catatatatccaaaagaaaag 25621
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 472      ccatctgagctgctgcaagcctggttggg 500
                ||||| |||||||||||||| ||||||||
Sbjct: 25864080 ccatcagagctgctgcaagcttggttggg 25864108
to top
>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 177800

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 473   catctgagctgctgcaagcctggtt 497
             ||||||||||||| |||||||||||
Sbjct: 42951 catctgagctgctccaagcctggtt 42927
to top
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_A09
          Length = 150755

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 472   ccatctgagctgctgcaagcctggttggg 500
             ||||| |||||||||||||| ||||||||
Sbjct: 49867 ccatcagagctgctgcaagcttggttggg 49895
to top
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0689E12
          Length = 147516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 472    ccatctgagctgctgcaagcctggttggg 500
              ||||| |||||||||||||| ||||||||
Sbjct: 136291 ccatcagagctgctgcaagcttggttggg 136319
to top
>emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chromosome X, complete
            sequence
          Length = 89031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 180  actacatatatatccaaaaga 200
            |||||||||||||||||||||
Sbjct: 8754 actacatatatatccaaaaga 8734
to top
>dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15O15
          Length = 23026

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 594   ctcccatgggtcatcaccaag 614
             |||||||||||||||||||||
Sbjct: 18789 ctcccatgggtcatcaccaag 18769
to top
>emb|AJ441312.1|ATH441312 Arabidopsis thaliana mRNA for early auxin-induced protein 22 (iaa22
           gene)
          Length = 837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 577 acgcaattcacaaactcctcccatgggtcatcaccaa 613
           ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 671 acgcagttcacaaactcttcccaaggatcatcaccaa 635
to top
>emb|CR384061.4| Zebrafish DNA sequence from clone CH211-182E10 in linkage group 20,
              complete sequence
          Length = 147179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 599    atgggtcatcaccaagaagta 619
              |||||||||||||||||||||
Sbjct: 145756 atgggtcatcaccaagaagta 145736
to top
>dbj|AK059543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F01, full
           insert sequence
          Length = 611

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 472 ccatctgagctgctgcaagcctggttggg 500
           ||||| |||||||||||||| ||||||||
Sbjct: 126 ccatcagagctgctgcaagcttggttggg 98
to top
>gb|AC153591.4| Mus musculus 6 BAC RP23-301O22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211061

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 473    catctgagctgctgcaagcctggtt 497
              ||||||||||||| |||||||||||
Sbjct: 185486 catctgagctgctccaagcctggtt 185462
to top
>gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response factor 8 (ARF8) mRNA, complete
            cds
          Length = 2817

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 594  ctcccatgggtcatcaccaag 614
            |||||||||||||||||||||
Sbjct: 2442 ctcccatgggtcatcaccaag 2422
to top
>gb|AY669794.1| Arabidopsis thaliana clone C105352 ARF19 (At1g19220) mRNA, complete
            cds
          Length = 3292

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 577  acgcaattcacaaactcctcccatgggtcatcaccaa 613
            ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 3095 acgcagttcacaaactcttcccaaggatcatcaccaa 3059
to top
>gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5g37020) mRNA, complete
            cds
          Length = 2467

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 594  ctcccatgggtcatcaccaag 614
            |||||||||||||||||||||
Sbjct: 2319 ctcccatgggtcatcaccaag 2299
to top
>ref|XM_632536.1| Dictyostelium discoideum hypothetical protein (DDB0187101), partial
            mRNA
          Length = 3414

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ttcaactgataaaactacat 186
            ||||||||||||||||||||
Sbjct: 3360 ttcaactgataaaactacat 3341
to top
>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 map MAP_LOC,
           complete sequence
          Length = 133983

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 atatatatccaaaagaaaag 204
           ||||||||||||||||||||
Sbjct: 934 atatatatccaaaagaaaag 915
to top
>gb|AC149265.1| Solanum demissum chromosome 5 clone PGEC858M02 map MAP_LOC, complete
             sequence
          Length = 114450

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 15857 atatatatccaaaagaaaag 15876
to top
>gb|AY730339.1| Solanum tuberosum strain P6/210 clone BAC BA76o11, complete sequence
          Length = 71400

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 55177 atatatatccaaaagaaaag 55196
to top
>gb|AC134415.8| Mus musculus chromosome 3, clone RP24-224P21, complete sequence
          Length = 167586

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catatatatccaaaagaaaa 203
             ||||||||||||||||||||
Sbjct: 43382 catatatatccaaaagaaaa 43401
to top
>gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, complete sequence
          Length = 204025

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    aacatgttaaaatgacagct 371
              ||||||||||||||||||||
Sbjct: 151170 aacatgttaaaatgacagct 151151
to top
>gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete sequence
          Length = 103155

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aatgttcttcccaagaacat 83
             ||||||||||||||||||||
Sbjct: 79751 aatgttcttcccaagaacat 79770
to top
>gb|AY662481.1| Feline leukemia virus clone 1110-32 envelope precursor protein
           gene, partial cds
          Length = 682

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 555 gcattttccctcacagctat 536
to top
>gb|AY662480.1| Feline leukemia virus clone 1110-31 envelope precursor protein
           gene, partial cds
          Length = 682

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 555 gcattttccctcacagctat 536
to top
>gb|AY662479.1| Feline leukemia virus clone 1110-30 envelope precursor protein
           gene, partial cds
          Length = 670

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 555 gcattttccctcacagctat 536
to top
>gb|AY662478.1| Feline leukemia virus clone 1110-25 envelope precursor protein
           gene, partial cds
          Length = 1575

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 237 gcattttccctcacagctat 218
to top
>gb|AY662477.1| Feline leukemia virus clone 1110-24 envelope precursor protein
           gene, partial cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 246 gcattttccctcacagctat 227
to top
>gb|AC147788.1| Latimeria menadoensis clone VMRC4-19C10, complete sequence
          Length = 168364

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 276  tttgcagctttgatgatggctgtaatacacat 307
            |||| ||||| |||||| ||||||||||||||
Sbjct: 4844 tttgtagcttagatgattgctgtaatacacat 4875
to top
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence
          Length = 181548

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   actgcatttcttttgcagctttga 288
             |||||||||||||| |||||||||
Sbjct: 33418 actgcatttcttttccagctttga 33395
to top
>gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, complete sequence
          Length = 191935

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   agctttcagttctcattcct 157
             ||||||||||||||||||||
Sbjct: 43775 agctttcagttctcattcct 43794
to top
>emb|AL929410.7| Human DNA sequence from clone RP11-234P3 on chromosome X Contains the
             MAGED1 gene for melanoma antigen, family D, 1, a
             pseudogene similar to part of PFKFB1
             (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1), a
             pseudogene similar to part of IPO7 (importin 7), a
             ubiquinol-cytochrome c reductase complex (7.2 kD)
             (HSPC051) pseudogene and a thiopurine S-methyltransferase
             (TMPT) pseudogene, complete sequence
          Length = 186649

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   actacatatatatccaaaagaaaa 203
             |||| |||||||||||||||||||
Sbjct: 75737 actagatatatatccaaaagaaaa 75714
to top
>emb|AL391114.12| Human DNA sequence from clone RP11-332A4 on chromosome 20 Contains part
             of the RBL1 gene for retinoblastoma-like 1 (p107), the
             RPS3AP3 gene for ribosomal protein S3A pseudogene 3, the
             RPS27AP3 gene for ribosomal protein S27a pseudogene 3 and
             a CpG island, complete sequence
          Length = 79223

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catatatatccaaaagaaaa 203
             ||||||||||||||||||||
Sbjct: 63574 catatatatccaaaagaaaa 63593
to top
>emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chromosome 13 Contains the
              gene for zinc finger protein of the cerebellum 5 (ZIC5),
              the ZIC2 gene for Zic family member 2 (odd-paired homolog
              Drosophila), a 13kDa differentiation-associated protein
              (DAP13) pseudogene, an asparagine synthetase (ASNS)
              pseudogene, the 5' end of the PCCA gene for propionyl
              Coenzyme A carboxylase alpha polypeptide and seven CpG
              islands, complete sequence
          Length = 153762

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    aactacatatatatccaaaa 198
              ||||||||||||||||||||
Sbjct: 132755 aactacatatatatccaaaa 132736
to top
>emb|AL139244.21| Human DNA sequence from clone RP5-1043G4 on chromosome 1p32.1-33
             Contains the 3' end of a novel gene (FLJ46354), the TTC4
             gene for tetratricopeptide repeat domain 4, a novel gene
             (DKFZp727A071), the 3' end of a novel gene (FLJ20619) and
             three CpG islands, complete sequence
          Length = 129156

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   acctctaagtcaggtcattc 401
             ||||||||||||||||||||
Sbjct: 34697 acctctaagtcaggtcattc 34716
to top
>emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chromosome 10p14-15.3,
             complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   catatatatccaaaagaaaa 203
             ||||||||||||||||||||
Sbjct: 65306 catatatatccaaaagaaaa 65287
to top
>gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, complete sequence
          Length = 167772

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    atatatatccaaaagaaaag 204
              ||||||||||||||||||||
Sbjct: 161236 atatatatccaaaagaaaag 161217
to top
>gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186117

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    atatatatccaaaagaaaag 204
              ||||||||||||||||||||
Sbjct: 141239 atatatatccaaaagaaaag 141258
to top
>emb|AL133541.21| Human DNA sequence from clone RP1-126E20 on chromosome 6 Contains the
             3' end of the BMP6 gene for bone morphogenetic protein 6,
             the gene for a novel protein similar to protein disulfide
             isomerases and a CpG island, complete sequence
          Length = 117952

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   acatgcttcactgcatttcttttg 279
             ||||||||||||||| ||||||||
Sbjct: 41903 acatgcttcactgcagttcttttg 41880
to top
>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 511    ctccccaaatcaccatccag 530
              ||||||||||||||||||||
Sbjct: 135786 ctccccaaatcaccatccag 135805
to top
>emb|AL031368.2|HS662N3 Human DNA sequence from clone RP4-662N3 on chromosome Xp21.1-21.3,
             complete sequence
          Length = 143890

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   actacatatatatccaaaagaaaa 203
             |||| |||||||||||||||||||
Sbjct: 38439 actaaatatatatccaaaagaaaa 38416
to top
>emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in linkage group 25,
              complete sequence
          Length = 187055

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tacacacaacccaacaatag 54
              ||||||||||||||||||||
Sbjct: 135814 tacacacaacccaacaatag 135795
to top
>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11,
              complete sequence
          Length = 237930

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    actgcatttcttttgcagctttga 288
              |||||||||||||||||| |||||
Sbjct: 142149 actgcatttcttttgcaggtttga 142126
to top
>gb|AC099567.2| Homo sapiens chromosome 1 clone RP5-936J12, complete sequence
          Length = 171400

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tatatatccaaaagaaaagc 205
             ||||||||||||||||||||
Sbjct: 81898 tatatatccaaaagaaaagc 81879
to top
>gb|AC009717.15| Homo sapiens chromosome 18, clone RP11-534N16, complete sequence
          Length = 184717

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 180  actacatatatatccaaaagaaaa 203
            |||| |||||||||||||||||||
Sbjct: 5515 actagatatatatccaaaagaaaa 5492
to top
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence
          Length = 191684

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ccctctgtctcaggtctcta 124
             ||||||||||||||||||||
Sbjct: 70105 ccctctgtctcaggtctcta 70124
to top
>gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 467  tccctccatctgagctgctg 486
            ||||||||||||||||||||
Sbjct: 7880 tccctccatctgagctgctg 7861
to top
>gb|AC105221.3| Homo sapiens chromosome 18, clone RP11-480N3, complete sequence
          Length = 165396

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catatatatccaaaagaaaa 203
             ||||||||||||||||||||
Sbjct: 60769 catatatatccaaaagaaaa 60788
to top
>gb|AC055740.17| Homo sapiens 3 BAC RP11-239J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147634

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 68412 atatatatccaaaagaaaag 68431
to top
>dbj|AK222303.1| Ciona intestinalis cDNA, clone:ciad096p21, full insert sequence
          Length = 3050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  tttcttttgcagctttgatg 290
            ||||||||||||||||||||
Sbjct: 2490 tttcttttgcagctttgatg 2471
to top
>gb|AC096773.3| Homo sapiens BAC clone RP11-810P8 from 4, complete sequence
          Length = 136403

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 180  actacatatatatccaaaagaaaa 203
            |||| |||||||||||||||||||
Sbjct: 4837 actatatatatatccaaaagaaaa 4860
to top
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence
          Length = 183066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 180    actacatatatatccaaaagaaaa 203
              |||| |||||||||||||||||||
Sbjct: 141017 actagatatatatccaaaagaaaa 140994
to top
>gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, complete sequence
          Length = 164278

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   catatatatccaaaagaaaa 203
             ||||||||||||||||||||
Sbjct: 57815 catatatatccaaaagaaaa 57796
to top
>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence
          Length = 154382

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    atatatatccaaaagaaaag 204
              ||||||||||||||||||||
Sbjct: 109012 atatatatccaaaagaaaag 109031



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  atatatatccaaaagaaaag 204
            ||||||||||||||||||||
Sbjct: 2901 atatatatccaaaagaaaag 2920
to top
>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11,
              complete sequence
          Length = 211986

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    actgcatttcttttgcagctttga 288
              |||||||||||||||||| |||||
Sbjct: 121100 actgcatttcttttgcaggtttga 121077
to top
>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22,
              complete sequence
          Length = 221392

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    tgggtcatcaccaagaagta 619
              ||||||||||||||||||||
Sbjct: 185712 tgggtcatcaccaagaagta 185731
to top
>gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, complete sequence
          Length = 149710

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   acatgcttcactgcatttcttttg 279
             ||||||||||||||||| ||||||
Sbjct: 80721 acatgcttcactgcattacttttg 80698
to top
>gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosome 7, complete sequence
          Length = 209661

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   actgcatttcttttgcagctttga 288
             |||||||||||||| |||||||||
Sbjct: 82992 actgcatttcttttccagctttga 82969
to top
>gb|AC037433.6|AC037433 Homo sapiens chromosome 15, clone RP11-92C13, complete sequence
          Length = 164500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    tatatatccaaaagaaaagc 205
              ||||||||||||||||||||
Sbjct: 111040 tatatatccaaaagaaaagc 111059
to top
>dbj|AB210806.1| Ciona intestinalis mRNA for zinc finger protein, complete cds, clone:
            cima853l09
          Length = 3012

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  tttcttttgcagctttgatg 290
            ||||||||||||||||||||
Sbjct: 2475 tttcttttgcagctttgatg 2456
to top
>gb|M12500.1|FCVGLENV Feline leukemia virus envelope protein gene, complete cds; and 3'
           copy long terminal repeat, complete sequence
          Length = 2522

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 616 gcattttccctcacagctat 597
to top
>gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complete sequence
          Length = 126219

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 180   actacatatatatccaaaagaaaa 203
             |||| |||||||||||||||||||
Sbjct: 36574 actagatatatatccaaaagaaaa 36597
to top
>gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, complete sequence
          Length = 173066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   acatgcttcactgcatttcttttg 279
             ||||||||||||||||| ||||||
Sbjct: 90615 acatgcttcactgcattacttttg 90592
to top
>gb|AC004962.1|AC004962 Homo sapiens PAC clone RP5-1099N7 from 1, complete sequence
          Length = 143749

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    acctctaagtcaggtcattc 401
              ||||||||||||||||||||
Sbjct: 142059 acctctaagtcaggtcattc 142040
to top
>gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, complete sequence
          Length = 154924

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     tatcttcagatttgcctaac 105
              ||||||||||||||||||||
Sbjct: 143867 tatcttcagatttgcctaac 143886
to top
>gb|AC068276.7| Homo sapiens BAC clone RP11-127H13 from 2, complete sequence
          Length = 163719

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tatcttcagatttgcctaac 105
             ||||||||||||||||||||
Sbjct: 16259 tatcttcagatttgcctaac 16278
to top
>ref|XM_573634.1| PREDICTED: Rattus norvegicus Huntington disease gene homolog (Hdh),
            mRNA
          Length = 9975

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 468  ccctccatctgagctgctgcaagc 491
            ||||||| ||||||||||||||||
Sbjct: 1155 ccctccacctgagctgctgcaagc 1178
to top
>gb|AC008243.6|AC008243 Homo sapiens, clone RP11-45L9, complete sequence
          Length = 161509

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    atatatatccaaaagaaaag 204
              ||||||||||||||||||||
Sbjct: 152281 atatatatccaaaagaaaag 152300
to top
>dbj|AB083077.1| Oryzias latipes DNA, globin gene cluster region
          Length = 47119

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   aacatgttaaaatgacagct 371
             ||||||||||||||||||||
Sbjct: 16883 aacatgttaaaatgacagct 16902
to top
>gb|AC009891.2|AC009891 Genomic Sequence for Homo sapiens clone H_NH0332F09, Chromosome 18,
              complete sequence
          Length = 194673

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    catatatatccaaaagaaaa 203
              ||||||||||||||||||||
Sbjct: 186459 catatatatccaaaagaaaa 186440
to top
>emb|AL929391.10| Zebrafish DNA sequence from clone CH211-155I14 in linkage group 20,
             complete sequence
          Length = 186458

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   tgggtcatcaccaagaagta 619
             ||||||||||||||||||||
Sbjct: 90963 tgggtcatcaccaagaagta 90944
to top
>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete
             sequence
          Length = 141796

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tatatatccaaaagaaaagc 205
             ||||||||||||||||||||
Sbjct: 16757 tatatatccaaaagaaaagc 16738
to top
>dbj|AP000821.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-673E11, complete
             sequence
          Length = 180821

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 72356 atatatatccaaaagaaaag 72375
to top
>dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-105F10, complete
             sequence
          Length = 134532

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 91521 atatatatccaaaagaaaag 91502
to top
>dbj|AP001541.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-683O4, complete
              sequence
          Length = 212884

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    atatatatccaaaagaaaag 204
              ||||||||||||||||||||
Sbjct: 197200 atatatatccaaaagaaaag 197219
to top
>dbj|AP001284.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-885L14, complete
             sequence
          Length = 153591

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atatatatccaaaagaaaag 204
             ||||||||||||||||||||
Sbjct: 46611 atatatatccaaaagaaaag 46630
to top
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence
          Length = 175793

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   ttccctccatctgagctgct 485
             ||||||||||||||||||||
Sbjct: 40159 ttccctccatctgagctgct 40178
to top
>gb|AF052723.1|AF052723 Feline leukemia virus strain Rickard subgroup A, complete genome
          Length = 8448

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  gcattttccctcacagctat 236
            ||||||||||||||||||||
Sbjct: 6542 gcattttccctcacagctat 6523
to top
>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence
          Length = 215900

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   atctgaggagcattttccct 227
             ||||||||||||||||||||
Sbjct: 51297 atctgaggagcattttccct 51278
to top
>gb|M23026.1|FCSGP70B Feline sarcoma virus (GA-FeSV) deletion mutant env gene
          Length = 2923

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  gcattttccctcacagctat 236
            ||||||||||||||||||||
Sbjct: 1018 gcattttccctcacagctat 999
to top
>gb|AC000113.1|HSAC000113 Human PAC clone DJ302C05 from Xq23, complete sequence
          Length = 135672

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 496   ttgggcaggacattgctccccaaa 519
             ||||||||||||||||||| ||||
Sbjct: 76049 ttgggcaggacattgctcctcaaa 76072
to top
>gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product mRNA, complete cds
          Length = 9929

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 468  ccctccatctgagctgctgcaagc 491
            ||||||| ||||||||||||||||
Sbjct: 1109 ccctccacctgagctgctgcaagc 1132
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>gb|L25630.1|FCVFELVAA Feline Leukemia Virus DNA sequence
          Length = 2317

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 555 gcattttccctcacagctat 536
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>gb|M89999.1|FCVGP70B Feline leukemia virus external glycoprotein (gp70) gene, complete
           mature peptide; env gene, partial cds; transmembrane
           protein (p15e) gene, 5' end mature peptide
          Length = 1309

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 465 gcattttccctcacagctat 446
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>gb|M89998.1|FCVGP70A Feline leukemia virus external glycoprotein (gp70) gene, 3' end
           mature peptide; env gene, partial cds
          Length = 1231

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 435 gcattttccctcacagctat 416
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>gb|M18248.1|FCVF3A Feline leukemia virus, subgroup A (FeLV-3281-A), envelope and LTR
           regions
          Length = 2521

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 gcattttccctcacagctat 236
           ||||||||||||||||||||
Sbjct: 616 gcattttccctcacagctat 597
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>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence
          Length = 248996

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tccctccatctgagctgctg 486
              ||||||||||||||||||||
Sbjct: 115171 tccctccatctgagctgctg 115152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,297,802
Number of Sequences: 3902068
Number of extensions: 6297802
Number of successful extensions: 126776
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126403
Number of HSP's gapped (non-prelim): 368
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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