ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3k02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550419.1| Oryza sativa (japonica cultivar-group), mRNA 301 2e-78
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 301 2e-78
3dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic D... 301 2e-78
4dbj|AK061255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 2e-78
5gb|AC079262.28| Homo sapiens 12 BAC RP11-560H17 (Roswell Park Ca... 44 0.61
6gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, com... 42 2.4
7gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 42 2.4
8emb|AL359925.9| Human DNA sequence from clone RP11-199B17 on chr... 42 2.4
9emb|AL034556.4|PFMAL3P5 Plasmodium falciparum MAL3P5, complete s... 42 2.4
10gb|AC163765.3| Pan troglodytes BAC clone CH251-175G24 from chrom... 42 2.4
11gb|AC026756.15|AC026756 Homo sapiens chromosome 13 clone RP11-28... 42 2.4
12gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell ... 42 2.4
13gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 9.5
14ref|NM_189473.1| Oryza sativa (japonica cultivar-group), predic... 40 9.5
15gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, com... 40 9.5
16emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chro... 40 9.5
17gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome... 40 9.5
18gb|AC116621.8| Homo sapiens BAC clone RP11-281H2 from 4, complet... 40 9.5
19gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, compl... 40 9.5
20gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete... 40 9.5
21gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, com... 40 9.5
22gb|AC093714.2| Homo sapiens BAC clone RP11-458K10 from 7, comple... 40 9.5
23gb|U58751.1| Caenorhabditis elegans cosmid C07G1, complete sequence 40 9.5
24emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chro... 40 9.5
25gb|AY341842.1| Oryza sativa (japonica cultivar-group) WRKY1 mRNA... 40 9.5
26emb|AL034396.6|HS1158B12 Human DNA sequence from clone RP5-1158B... 40 9.5
27gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 9.5
28emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chro... 40 9.5
29gb|BC075797.1| Homo sapiens cDNA clone MGC:87550 IMAGE:30347465,... 40 9.5
30gb|AC048343.14| Homo sapiens 12 BAC RP11-315K5 (Roswell Park Can... 40 9.5
31gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, comple... 40 9.5
32gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cance... 40 9.5
33tpg|BK005020.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 9.5
34gb|AC114688.3| Homo sapiens chromosome 18, clone RP11-316J22, co... 40 9.5
35gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, com... 40 9.5
36gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park C... 40 9.5
37gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, comple... 40 9.5
38gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, comple... 40 9.5
39gb|AC016098.8| Homo sapiens, clone RP11-25P13, complete sequence 40 9.5
40gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, comple... 40 9.5
41gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, comp... 40 9.5
42gb|AC157098.5| Mus musculus 6 BAC RP24-398G2 (Roswell Park Cance... 40 9.5
43ref|NM_068974.4| Caenorhabditis elegans Hepatocyte Growth factor... 40 9.5
44ref|XM_625117.1| PREDICTED: Apis mellifera similar to integrin a... 40 9.5
45gb|AC158650.7| Mus musculus 6 BAC RP23-280O4 (Roswell Park Cance... 40 9.5
46gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosom... 40 9.5
47gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, c... 40 9.5
48dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
49dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
50gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, comple... 40 9.5
51gb|AC092575.3| Homo sapiens BAC clone RP11-4C18 from 2, complete... 40 9.5
52dbj|AK110625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
53gb|AC005281.2|AC005281 Homo sapiens PAC clone RP4-722F20 from 7q... 40 9.5
54emb|AL672031.10| Mouse DNA sequence from clone RP23-433D6 on chr... 40 9.5
55gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 9.5
56emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8... 40 9.5
57emb|CR942518.2| Xenopus tropicalis finished cDNA, clone TEgg065g15 40 9.5
58dbj|AP005138.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.5
59emb|CT027994.2| M.spretus DNA sequence from clone XX-CH35_17P24 ... 40 9.5
60gb|AY870605.1| Oryza sativa (japonica cultivar-group) WRKY17 mRN... 40 9.5
61emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9... 40 9.5
62dbj|AP005380.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.5
63gb|AC013548.13| Mus musculus chromosome 7, clone RP23-209O22, co... 40 9.5
64dbj|AP003182.2| Mus musculus genomic DNA, chromosome 7 clone:B18... 40 9.5
65dbj|AP005118.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.5
66dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 9.5
67emb|AL359682.4|CNS05TF0 Human chromosome 14 DNA sequence BAC C-2... 40 9.5 
>ref|XM_550419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score =  301 bits (152), Expect = 2e-78
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gatttacatgagagggaggtatgtacccccatggcccttcctcagtattagcggccccgg 388
           ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || | 
Sbjct: 981 gatttacatgagagggaggtatgtaccaccatggcccttcctcaggattagagggccag- 923

                                                                       
Query: 389 cgttctcagggaccttgtcgagaactgcattgcagctctcaaggacgtcgctgaacccag 448
           ||||||| || |||||||| | |||   ||||||    ||||| ||||| || || || |
Sbjct: 922 cgttctccggaaccttgtccaaaacactattgcatgcgtcaagaacgtcactaaatcccg 863

                                                                       
Query: 449 tcgccagagttgccaactgcagcctcagcctcatatccctcgttcgacgcagcaggctcc 508
           | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 862 ttgcaagagttgccaactgcagcctcagcctcatatccctcgttcgacggagaaggctcc 803

                                                                       
Query: 509 tgaatgatctgccgagatgctttccccactcggcaggcaagcctccaggcgaaagccaga 568
           |||| |||||||| ||||| ||  ||||||| |||||||||||||| |||||||||||||
Sbjct: 802 tgaacgatctgccaagatgtttcacccactctgcaggcaagcctccgggcgaaagccaga 743

                                                                       
Query: 569 ctggagaagtgcgactggtcgcccctggctgcaacctctgcccggtaaaatcttgcaagc 628
           |  |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 742 c-cgagaagtgtgactggtcccccctggctgcaacctccgcccggtaaaatcttgcaagc 684

                                                                       
Query: 629 tcgacgagcattgggtgggtgcaggggcagaactagtacaaattcagcaacaaatagctc 688
           ||||  |||||| ||||| ||||||||||| || |  ||||| ||||| |||||| ||||
Sbjct: 683 tcgagtagcatt-ggtggctgcaggggcagcaccaacacaaactcagccacaaattgctc 625
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  301 bits (152), Expect = 2e-78
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                           
Query: 329     gatttacatgagagggaggtatgtacccccatggcccttcctcagtattagcggccccgg 388
               ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || | 
Sbjct: 4392048 gatttacatgagagggaggtatgtaccaccatggcccttcctcaggattagagggccag- 4391990

                                                                           
Query: 389     cgttctcagggaccttgtcgagaactgcattgcagctctcaaggacgtcgctgaacccag 448
               ||||||| || |||||||| | |||   ||||||    ||||| ||||| || || || |
Sbjct: 4391989 cgttctccggaaccttgtccaaaacactattgcatgcgtcaagaacgtcactaaatcccg 4391930

                                                                           
Query: 449     tcgccagagttgccaactgcagcctcagcctcatatccctcgttcgacgcagcaggctcc 508
               | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 4391929 ttgcaagagttgccaactgcagcctcagcctcatatccctcgttcgacggagaaggctcc 4391870

                                                                           
Query: 509     tgaatgatctgccgagatgctttccccactcggcaggcaagcctccaggcgaaagccaga 568
               |||| |||||||| ||||| ||  ||||||| |||||||||||||| |||||||||||||
Sbjct: 4391869 tgaacgatctgccaagatgtttcacccactctgcaggcaagcctccgggcgaaagccaga 4391810

                                                                           
Query: 569     ctggagaagtgcgactggtcgcccctggctgcaacctctgcccggtaaaatcttgcaagc 628
               |  |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 4391809 c-cgagaagtgtgactggtcccccctggctgcaacctccgcccggtaaaatcttgcaagc 4391751

                                                                           
Query: 629     tcgacgagcattgggtgggtgcaggggcagaactagtacaaattcagcaacaaatagctc 688
               ||||  |||||| ||||| ||||||||||| || |  ||||| ||||| |||||| ||||
Sbjct: 4391750 tcgagtagcatt-ggtggctgcaggggcagcaccaacacaaactcagccacaaattgctc 4391692



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 462      caactgcagcctcagcctca 481
                ||||||||||||||||||||
Sbjct: 42940461 caactgcagcctcagcctca 42940480
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>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0489A01
          Length = 137174

 Score =  301 bits (152), Expect = 2e-78
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                         
Query: 329   gatttacatgagagggaggtatgtacccccatggcccttcctcagtattagcggccccgg 388
             ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || | 
Sbjct: 52130 gatttacatgagagggaggtatgtaccaccatggcccttcctcaggattagagggccag- 52072

                                                                         
Query: 389   cgttctcagggaccttgtcgagaactgcattgcagctctcaaggacgtcgctgaacccag 448
             ||||||| || |||||||| | |||   ||||||    ||||| ||||| || || || |
Sbjct: 52071 cgttctccggaaccttgtccaaaacactattgcatgcgtcaagaacgtcactaaatcccg 52012

                                                                         
Query: 449   tcgccagagttgccaactgcagcctcagcctcatatccctcgttcgacgcagcaggctcc 508
             | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 52011 ttgcaagagttgccaactgcagcctcagcctcatatccctcgttcgacggagaaggctcc 51952

                                                                         
Query: 509   tgaatgatctgccgagatgctttccccactcggcaggcaagcctccaggcgaaagccaga 568
             |||| |||||||| ||||| ||  ||||||| |||||||||||||| |||||||||||||
Sbjct: 51951 tgaacgatctgccaagatgtttcacccactctgcaggcaagcctccgggcgaaagccaga 51892

                                                                         
Query: 569   ctggagaagtgcgactggtcgcccctggctgcaacctctgcccggtaaaatcttgcaagc 628
             |  |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 51891 c-cgagaagtgtgactggtcccccctggctgcaacctccgcccggtaaaatcttgcaagc 51833

                                                                         
Query: 629   tcgacgagcattgggtgggtgcaggggcagaactagtacaaattcagcaacaaatagctc 688
             ||||  |||||| ||||| ||||||||||| || |  ||||| ||||| |||||| ||||
Sbjct: 51832 tcgagtagcatt-ggtggctgcaggggcagcaccaacacaaactcagccacaaattgctc 51774
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>dbj|AK061255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A11, full
           insert sequence
          Length = 1353

 Score =  301 bits (152), Expect = 2e-78
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gatttacatgagagggaggtatgtacccccatggcccttcctcagtattagcggccccgg 388
           ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || | 
Sbjct: 981 gatttacatgagagggaggtatgtaccaccatggcccttcctcaggattagagggccag- 923

                                                                       
Query: 389 cgttctcagggaccttgtcgagaactgcattgcagctctcaaggacgtcgctgaacccag 448
           ||||||| || |||||||| | |||   ||||||    ||||| ||||| || || || |
Sbjct: 922 cgttctccggaaccttgtccaaaacactattgcatgcgtcaagaacgtcactaaatcccg 863

                                                                       
Query: 449 tcgccagagttgccaactgcagcctcagcctcatatccctcgttcgacgcagcaggctcc 508
           | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 862 ttgcaagagttgccaactgcagcctcagcctcatatccctcgttcgacggagaaggctcc 803

                                                                       
Query: 509 tgaatgatctgccgagatgctttccccactcggcaggcaagcctccaggcgaaagccaga 568
           |||| |||||||| ||||| ||  ||||||| |||||||||||||| |||||||||||||
Sbjct: 802 tgaacgatctgccaagatgtttcacccactctgcaggcaagcctccgggcgaaagccaga 743

                                                                       
Query: 569 ctggagaagtgcgactggtcgcccctggctgcaacctctgcccggtaaaatcttgcaagc 628
           |  |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 742 c-cgagaagtgtgactggtcccccctggctgcaacctccgcccggtaaaatcttgcaagc 684

                                                                       
Query: 629 tcgacgagcattgggtgggtgcaggggcagaactagtacaaattcagcaacaaatagctc 688
           ||||  |||||| ||||| ||||||||||| || |  ||||| ||||| |||||| ||||
Sbjct: 683 tcgagtagcatt-ggtggctgcaggggcagcaccaacacaaactcagccacaaattgctc 625
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>gb|AC079262.28| Homo sapiens 12 BAC RP11-560H17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 208686

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 308   tttgggagaaaaagaagaggtg 329
             ||||||||||||||||||||||
Sbjct: 60265 tttgggagaaaaagaagaggtg 60244
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>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence
          Length = 185733

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 460   gccaactgcagcctcagcctc 480
             |||||||||||||||||||||
Sbjct: 88552 gccaactgcagcctcagcctc 88572
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 466 tgcagcctcagcctcatatcc 486
           |||||||||||||||||||||
Sbjct: 422 tgcagcctcagcctcatatcc 442
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>emb|AL359925.9| Human DNA sequence from clone RP11-199B17 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 150088

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    ttgatacaaatatacaatgta 30
             |||||||||||||||||||||
Sbjct: 44226 ttgatacaaatatacaatgta 44206
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>emb|AL034556.4|PFMAL3P5 Plasmodium falciparum MAL3P5, complete sequence
          Length = 86826

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    atacaaatatacaatgtagca 33
             |||||||||||||||||||||
Sbjct: 45323 atacaaatatacaatgtagca 45303
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>gb|AC163765.3| Pan troglodytes BAC clone CH251-175G24 from chromosome unknown,
             complete sequence
          Length = 196942

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   tgggacaaagaaagcatgaaa 264
             |||||||||||||||||||||
Sbjct: 68918 tgggacaaagaaagcatgaaa 68938
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>gb|AC026756.15|AC026756 Homo sapiens chromosome 13 clone RP11-286P8, complete sequence
          Length = 156555

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    ttgatacaaatatacaatgta 30
             |||||||||||||||||||||
Sbjct: 35373 ttgatacaaatatacaatgta 35393
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>gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166357

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    ttgatacaaatatacaatgta 30
             |||||||||||||||||||||
Sbjct: 93843 ttgatacaaatatacaatgta 93823
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    aacttttgggagaaaaagaa 323
              ||||||||||||||||||||
Sbjct: 865512 aacttttgggagaaaaagaa 865531



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ttttgggagaaaaagaagag 326
              ||||||||||||||||||||
Sbjct: 626807 ttttgggagaaaaagaagag 626826
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>ref|NM_189473.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 caactgcagcctcagcctca 481
           ||||||||||||||||||||
Sbjct: 700 caactgcagcctcagcctca 719
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>gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, complete sequence
          Length = 202319

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    tttgggagaaaaagaagagg 327
              ||||||||||||||||||||
Sbjct: 109752 tttgggagaaaaagaagagg 109771
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>emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chromosome 13, complete
             sequence
          Length = 220594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aaaatgctttatatacaaac 175
             ||||||||||||||||||||
Sbjct: 26850 aaaatgctttatatacaaac 26869
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>gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome 5, complete sequence
          Length = 180892

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tgtagcatacattacaaaca 46
             ||||||||||||||||||||
Sbjct: 99873 tgtagcatacattacaaaca 99892
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>gb|AC116621.8| Homo sapiens BAC clone RP11-281H2 from 4, complete sequence
          Length = 53135

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   tttgggagaaaaagaagagg 327
             ||||||||||||||||||||
Sbjct: 25635 tttgggagaaaaagaagagg 25654
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>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence
          Length = 175889

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tacactcctgtaagatttat 301
             ||||||||||||||||||||
Sbjct: 69297 tacactcctgtaagatttat 69316
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>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence
          Length = 214995

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    tttgggagaaaaagaagagg 327
              ||||||||||||||||||||
Sbjct: 156673 tttgggagaaaaagaagagg 156692
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>gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, complete sequence
          Length = 230585

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tttgggagaaaaagaagagg 327
              ||||||||||||||||||||
Sbjct: 171767 tttgggagaaaaagaagagg 171748
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>gb|AC093714.2| Homo sapiens BAC clone RP11-458K10 from 7, complete sequence
          Length = 142751

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttgatacaaatatacaatgt 29
             ||||||||||||||||||||
Sbjct: 86734 ttgatacaaatatacaatgt 86753
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>gb|U58751.1| Caenorhabditis elegans cosmid C07G1, complete sequence
          Length = 44298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   aacttttgggagaaaaagaagagg 327
             |||||||| |||||||||||||||
Sbjct: 34012 aacttttgagagaaaaagaagagg 33989
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>emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 58857

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   agaaaaagaagaggtgattt 333
             ||||||||||||||||||||
Sbjct: 23866 agaaaaagaagaggtgattt 23885
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>gb|AY341842.1| Oryza sativa (japonica cultivar-group) WRKY1 mRNA, complete cds
          Length = 1414

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 caactgcagcctcagcctca 481
           ||||||||||||||||||||
Sbjct: 767 caactgcagcctcagcctca 786
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>emb|AL034396.6|HS1158B12 Human DNA sequence from clone RP5-1158B12 on chromosome Xp11.21-11.4
             Contains the ZXDA gene for X-linked duplicated Zinc finger
             A, a v-myc myelocytomatosis viral oncogene homolog 1 lung
             carcinoma derived (avian) (MYCL1) pseudogene, a  keratin 8
             (KRT8) pseudogene and a CpG island, complete sequence
          Length = 122884

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   gccaactgcagcctcagcct 479
             ||||||||||||||||||||
Sbjct: 63988 gccaactgcagcctcagcct 63969
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     ggtggcctcatccaagtcat 205
               ||||||||||||||||||||
Sbjct: 1278142 ggtggcctcatccaagtcat 1278123
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>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a
              pseudogene similar to part of ribosomal protein S2 (Rps2),
              a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7)
              pseudogene, a pseudogene similar to part of a novel
              protein, a novel gene and a eukaryotic translation
              initiation factor pseudogene, complete sequence
          Length = 196006

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tcaaaatgctttatatacaa 173
              ||||||||||||||||||||
Sbjct: 142594 tcaaaatgctttatatacaa 142575
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>gb|BC075797.1| Homo sapiens cDNA clone MGC:87550 IMAGE:30347465, complete cds
          Length = 6925

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  caacttttgggagaaaaaga 322
            ||||||||||||||||||||
Sbjct: 6430 caacttttgggagaaaaaga 6411
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>gb|AC048343.14| Homo sapiens 12 BAC RP11-315K5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 33590

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 640   tgggtgggtgcaggggcagaacta 663
             |||||||| |||||||||||||||
Sbjct: 26735 tgggtgggggcaggggcagaacta 26712
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>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence
          Length = 214098

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   actgcagcctcagcctcata 483
             ||||||||||||||||||||
Sbjct: 28528 actgcagcctcagcctcata 28509
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>gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155417

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 207    gaattcagaggaagaagggaaatg 230
              ||||||||||||||||| ||||||
Sbjct: 114893 gaattcagaggaagaagagaaatg 114916
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>tpg|BK005020.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
            transcription factor 17 (WRKY17) gene, complete cds
          Length = 1805

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 462  caactgcagcctcagcctca 481
            ||||||||||||||||||||
Sbjct: 1284 caactgcagcctcagcctca 1303
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>gb|AC114688.3| Homo sapiens chromosome 18, clone RP11-316J22, complete sequence
          Length = 166525

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aatgtagcatacattacaaa 44
              ||||||||||||||||||||
Sbjct: 108814 aatgtagcatacattacaaa 108833
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>gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, complete sequence
          Length = 116879

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 641    gggtgggtgcaggggcagaa 660
              ||||||||||||||||||||
Sbjct: 100039 gggtgggtgcaggggcagaa 100058
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>gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 198068

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  tgggagaaaaagaagaggtg 329
            ||||||||||||||||||||
Sbjct: 6416 tgggagaaaaagaagaggtg 6435
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>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence
          Length = 143498

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttgatacaaatatacaatgt 29
             ||||||||||||||||||||
Sbjct: 22118 ttgatacaaatatacaatgt 22137
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>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence
          Length = 184001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 6      tggattgatacaaatatacaatgt 29
              |||||||||||| |||||||||||
Sbjct: 105000 tggattgatacatatatacaatgt 105023
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>gb|AC016098.8| Homo sapiens, clone RP11-25P13, complete sequence
          Length = 156275

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aatgtagcatacattacaaa 44
             ||||||||||||||||||||
Sbjct: 62795 aatgtagcatacattacaaa 62776
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>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence
          Length = 196550

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      tggattgatacaaatatacaatgt 29
              |||||||||||| |||||||||||
Sbjct: 186244 tggattgatacatatatacaatgt 186221
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>gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, complete sequence
          Length = 149710

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 299   tatccaacttttgggagaaaaagaagag 326
             |||||||||||| || ||||||||||||
Sbjct: 68156 tatccaacttttaggtgaaaaagaagag 68183
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>gb|AC157098.5| Mus musculus 6 BAC RP24-398G2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 168496

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   gggagaaaaagaagaggtga 330
             ||||||||||||||||||||
Sbjct: 13952 gggagaaaaagaagaggtga 13971
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>ref|NM_068974.4| Caenorhabditis elegans Hepatocyte Growth factor-Regulated TK
           Substrate (HRS) family member (hgrs-1) (hgrs-1) mRNA,
           complete cds
          Length = 2523

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 aacttttgggagaaaaagaagagg 327
           |||||||| |||||||||||||||
Sbjct: 758 aacttttgagagaaaaagaagagg 781
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>ref|XM_625117.1| PREDICTED: Apis mellifera similar to integrin alpha 1 (LOC552742),
            mRNA
          Length = 3159

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  cttttgggagaaaaagaaga 325
            ||||||||||||||||||||
Sbjct: 2086 cttttgggagaaaaagaaga 2105
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>gb|AC158650.7| Mus musculus 6 BAC RP23-280O4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 193965

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   gggagaaaaagaagaggtga 330
             ||||||||||||||||||||
Sbjct: 68062 gggagaaaaagaagaggtga 68043
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>gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosome 13, complete sequence
          Length = 182994

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaaatgctttatatacaaac 175
              ||||||||||||||||||||
Sbjct: 180930 aaaatgctttatatacaaac 180911
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>gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, complete sequence
          Length = 208310

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 641    gggtgggtgcaggggcagaa 660
              ||||||||||||||||||||
Sbjct: 164237 gggtgggtgcaggggcagaa 164218
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>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698H10
          Length = 153449

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   caactgcagcctcagcctca 481
             ||||||||||||||||||||
Sbjct: 41340 caactgcagcctcagcctca 41359
to top
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0518C01
          Length = 173555

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    caactgcagcctcagcctca 481
              ||||||||||||||||||||
Sbjct: 134195 caactgcagcctcagcctca 134214
to top
>gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, complete sequence
          Length = 173066

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 299   tatccaacttttgggagaaaaagaagag 326
             |||||||||||| || ||||||||||||
Sbjct: 78058 tatccaacttttaggtgaaaaagaagag 78085
to top
>gb|AC092575.3| Homo sapiens BAC clone RP11-4C18 from 2, complete sequence
          Length = 120927

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ttgatacaaatatacaatgt 29
              ||||||||||||||||||||
Sbjct: 102854 ttgatacaaatatacaatgt 102835
to top
>dbj|AK110625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B02, full
           insert sequence
          Length = 1312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 caactgcagcctcagcctca 481
           ||||||||||||||||||||
Sbjct: 745 caactgcagcctcagcctca 764
to top
>gb|AC005281.2|AC005281 Homo sapiens PAC clone RP4-722F20 from 7q31.1-q31.3, complete sequence
          Length = 107438

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   caacttttgggagaaaaaga 322
             ||||||||||||||||||||
Sbjct: 40866 caacttttgggagaaaaaga 40847
to top
>emb|AL672031.10| Mouse DNA sequence from clone RP23-433D6 on chromosome X, complete
            sequence
          Length = 183828

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  tttgggagaaaaagaagagg 327
            ||||||||||||||||||||
Sbjct: 8471 tttgggagaaaaagaagagg 8452
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 661    ctagtacaaattcagcaacaaata 684
              ||||||||||||||| ||||||||
Sbjct: 858781 ctagtacaaattcaggaacaaata 858804
to top
>emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8L8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166894

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   ccaacttttgggagaaaaag 321
             ||||||||||||||||||||
Sbjct: 23579 ccaacttttgggagaaaaag 23598
to top
>emb|CR942518.2| Xenopus tropicalis finished cDNA, clone TEgg065g15
          Length = 3543

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  aacttttgggagaaaaagaa 323
            ||||||||||||||||||||
Sbjct: 1419 aacttttgggagaaaaagaa 1438
to top
>dbj|AP005138.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-92G19, complete
              sequence
          Length = 157568

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 464    actgcagcctcagcctcata 483
              ||||||||||||||||||||
Sbjct: 148235 actgcagcctcagcctcata 148216
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>emb|CT027994.2| M.spretus DNA sequence from clone XX-CH35_17P24 on chromosome 7,
             complete sequence
          Length = 169471

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    acaatgtagcatacattaca 42
             ||||||||||||||||||||
Sbjct: 94070 acaatgtagcatacattaca 94051
to top
>gb|AY870605.1| Oryza sativa (japonica cultivar-group) WRKY17 mRNA, complete cds
          Length = 1284

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 caactgcagcctcagcctca 481
           ||||||||||||||||||||
Sbjct: 731 caactgcagcctcagcctca 750
to top
>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
              complete sequence
          Length = 148521

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    agaaaaagaagaggtgattt 333
              ||||||||||||||||||||
Sbjct: 113530 agaaaaagaagaggtgattt 113549
to top
>dbj|AP005380.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-190I17, complete
             sequence
          Length = 154315

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   actgcagcctcagcctcata 483
             ||||||||||||||||||||
Sbjct: 45249 actgcagcctcagcctcata 45230
to top
>gb|AC013548.13| Mus musculus chromosome 7, clone RP23-209O22, complete sequence
          Length = 220084

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    acaatgtagcatacattaca 42
             ||||||||||||||||||||
Sbjct: 97729 acaatgtagcatacattaca 97710
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>dbj|AP003182.2| Mus musculus genomic DNA, chromosome 7 clone:B189M11, complete
             sequences
          Length = 105288

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    acaatgtagcatacattaca 42
             ||||||||||||||||||||
Sbjct: 67846 acaatgtagcatacattaca 67827
to top
>dbj|AP005118.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-22C7, complete
            sequences
          Length = 166857

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   tgatacaaatatacaatgta 30
            ||||||||||||||||||||
Sbjct: 5703 tgatacaaatatacaatgta 5684
to top
>dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:RP11-678G15, complete
              sequence
          Length = 187987

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tgatacaaatatacaatgta 30
              ||||||||||||||||||||
Sbjct: 154418 tgatacaaatatacaatgta 154399
to top
>emb|AL359682.4|CNS05TF0 Human chromosome 14 DNA sequence BAC C-2561F5 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 116067

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   ccaacttttgggagaaaaag 321
             ||||||||||||||||||||
Sbjct: 83024 ccaacttttgggagaaaaag 83043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,613,714
Number of Sequences: 3902068
Number of extensions: 7613714
Number of successful extensions: 309092
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 308653
Number of HSP's gapped (non-prelim): 431
length of query: 692
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 669
effective length of database: 17,143,297,704
effective search space: 11468866163976
effective search space used: 11468866163976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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