>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase
          Length = 1710

 Score = 1086 bits (548), Expect = 0.0
 Identities = 566/572 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 1645

                                                                        
Query: 61   gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagcga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1644 gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagtga 1585

                                                                        
Query: 121  cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 1525

                                                                        
Query: 181  cgccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaac 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 cgccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaac 1465

                                                                        
Query: 241  ggttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagc 300
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1464 ggttggctcgccccactccaaggccttcttttctagcgtttcaaagtcgcccttcccagc 1405

                                                                        
Query: 301  ctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 ctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtc 1345

                                                                        
Query: 361  cagggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccat 420
            ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1344 cagggaaccatcctcaatcagcttgacaacattgcggcggccgcgggccatggtgtccat 1285

                                                                        
Query: 421  cccagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 cccagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggc 1225

                                                                        
Query: 481  atcaaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaa 540
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 gtaaaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaa 1165

                                            
Query: 541  ggtagcttctgaaatgtctgtaaggaactcat 572
            ||||||||||||||||||||||||||||||||
Sbjct: 1164 ggtagcttctgaaatgtctgtaaggaactcat 1133

>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score =  438 bits (221), Expect = e-120
 Identities = 224/225 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 4408

                                                                        
Query: 61   gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagcga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4407 gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagtga 4348

                                                                        
Query: 121  cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 4288

                                                         
Query: 181  cgccatctacagagcggattggaacagcatctcagccaattcctg 225
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 cgccatctacagagcggattggaacagcatctcagccaattcctg 4243



 Score =  184 bits (93), Expect = 2e-43
 Identities = 99/101 (98%)
 Strand = Plus / Minus

                                                                        
Query: 372  cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 431
            |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3818 cctcaatcagcttgacaacattgcggcggccgcgggccatggtgtccatcccagagatat 3759

                                                     
Query: 432  gggcaataaacaggtcctcaacatcagtactctccctccgc 472
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 gggcaataaacaggtcctcaacatcagtactctccctccgc 3718



 Score =  153 bits (77), Expect = 8e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                        
Query: 222  cctgtttgcccgatggaacggttggctcgccccactccaagaccttcttttctagcgttt 281
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4135 cctgtttgcccgatggaacggttggctcgccccactccaaggccttcttttctagcgttt 4076

                                 
Query: 282  caaagtcgcccttcccagcct 302
            |||||||||||||||||||||
Sbjct: 4075 caaagtcgcccttcccagcct 4055



 Score =  149 bits (75), Expect = 1e-32
 Identities = 75/75 (100%)
 Strand = Plus / Minus

                                                                        
Query: 300  cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3976 cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 3917

                           
Query: 360  ccagggaaccatcct 374
            |||||||||||||||
Sbjct: 3916 ccagggaaccatcct 3902



 Score =  119 bits (60), Expect = 1e-23
 Identities = 60/60 (100%)
 Strand = Plus / Minus

                                                                        
Query: 513  cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3462 cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 3403



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 472  caatttggcatcaaagttgaagccaccaggcgcaagtccatc 513
            ||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 3629 caatttggcgtaaaagttgaagccaccaggcgcaagtccatc 3588

>gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence
          Length = 1548

 Score =  392 bits (198), Expect = e-106
 Identities = 321/362 (88%)
 Strand = Plus / Minus

                                                                        
Query: 200  tggaacagcatctcagccaattcctgtttgcccgatggaacggttggctcgccccactcc 259
            |||||||| ||||| |||| |||||||||||| |||| ||| || ||||| |||||||| 
Sbjct: 1260 tggaacagaatctccgccagttcctgtttgccggatgcaacagtgggctcaccccactct 1201

                                                                        
Query: 260  aagaccttcttttctagcgtttcaaagtcgcccttcccagcctcgatcatggcaccaatc 319
            |  ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||
Sbjct: 1200 agaaccttcttttctagcgtctcaaagtctcctttcccagcctcgatcaaggcaccaatc 1141

                                                                        
Query: 320  tcagtgtcaaagctctggtagcgtttgcgtacaagctcgtccagggaaccatcctcaatc 379
            ||| | |||||||||||||| || ||||| ||||| || || ||||||||||||||||||
Sbjct: 1140 tcactatcaaagctctggtaccgcttgcggacaagatcatctagggaaccatcctcaatc 1081

                                                                        
Query: 380  agcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatatgggcaata 439
            ||||||||||| || || ||||| || |||| ||||||||| || ||||||||||||| |
Sbjct: 1080 agcttggcaacgttacgaaggccacgtgccagggtgtccattccggagatatgggcaaga 1021

                                                                        
Query: 440  aacaggtcctcaacatcagtactctccctccgcaatttggcatcaaagttgaagccacca 499
            |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1020 aacatgtcctcaacatcagtactttccctccgcaatttggcatcaaagttgaaaccacca 961

                                                                        
Query: 500  ggcgcaagtccatcattcttaactacacttgacataatcaaggtagcttctgaaatgtct 559
            || ||||||||| |||||||||||||||||||||||| ||| ||||| |||| |||||||
Sbjct: 960  ggtgcaagtccaccattcttaactacacttgacataaccaaagtagcctctgcaatgtct 901

              
Query: 560  gt 561
            ||
Sbjct: 900  gt 899

>gb|AY104014.1| Zea mays PCO103489 mRNA sequence
          Length = 2135

 Score =  392 bits (198), Expect = e-106
 Identities = 321/362 (88%)
 Strand = Plus / Minus

                                                                        
Query: 200  tggaacagcatctcagccaattcctgtttgcccgatggaacggttggctcgccccactcc 259
            |||||||| ||||| |||| |||||||||||| |||| ||| || ||||| |||||||| 
Sbjct: 1838 tggaacagaatctccgccagttcctgtttgccggatgcaacagtgggctcaccccactct 1779

                                                                        
Query: 260  aagaccttcttttctagcgtttcaaagtcgcccttcccagcctcgatcatggcaccaatc 319
            |  ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||
Sbjct: 1778 agaaccttcttttctagcgtctcaaagtctcctttcccagcctcgatcaaggcaccaatc 1719

                                                                        
Query: 320  tcagtgtcaaagctctggtagcgtttgcgtacaagctcgtccagggaaccatcctcaatc 379
            ||| | |||||||||||||| || ||||| ||||| || || |||||||||||| |||||
Sbjct: 1718 tcactatcaaagctctggtaccgcttgcggacaagatcatctagggaaccatccccaatc 1659

                                                                        
Query: 380  agcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatatgggcaata 439
            ||||||||||| || |||||||| || |||| ||||||||| || ||||||||||||| |
Sbjct: 1658 agcttggcaacgttacggaggccacgtgccagggtgtccattccggagatatgggcaaga 1599

                                                                        
Query: 440  aacaggtcctcaacatcagtactctccctccgcaatttggcatcaaagttgaagccacca 499
            |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1598 aacatgtcctcaacatcagtactttccctccgcaatttggcatcaaagttgaaaccacca 1539

                                                                        
Query: 500  ggcgcaagtccatcattcttaactacacttgacataatcaaggtagcttctgaaatgtct 559
            || ||||||||| |||||||||||||||||||||||| ||| ||||| |||| |||||||
Sbjct: 1538 ggtgcaagtccaccattcttaactacacttgacataaccaaagtagcctctgcaatgtct 1479

              
Query: 560  gt 561
            ||
Sbjct: 1478 gt 1477

>ref|XM_479446.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1760

 Score =  355 bits (179), Expect = 1e-94
 Identities = 335/387 (86%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 242
            ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 1550 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 1491

                                                                        
Query: 243  ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 302
            | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 1490 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 1431

                                                                        
Query: 303  cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 362
            | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 1430 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 1371

                                                                        
Query: 363  gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 422
            ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 1370 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 1311

                                                                        
Query: 423  cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 482
            | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1310 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 1251

                                                                        
Query: 483  caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 542
            |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 1250 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 1191

                                       
Query: 543  tagcttctgaaatgtctgtaaggaact 569
            |||| |||||||| |||||||||||||
Sbjct: 1190 tagcctctgaaatatctgtaaggaact 1164

>dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F02, full
           insert sequence
          Length = 1177

 Score =  355 bits (179), Expect = 1e-94
 Identities = 335/387 (86%)
 Strand = Plus / Minus

                                                                       
Query: 183 ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 242
           ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 960 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 901

                                                                       
Query: 243 ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 302
           | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 900 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 841

                                                                       
Query: 303 cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 362
           | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 840 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 781

                                                                       
Query: 363 gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 422
           ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 780 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 721

                                                                       
Query: 423 cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 482
           | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 720 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 661

                                                                       
Query: 483 caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 542
           |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 660 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 601

                                      
Query: 543 tagcttctgaaatgtctgtaaggaact 569
           |||| |||||||| |||||||||||||
Sbjct: 600 tagcctctgaaatatctgtaaggaact 574

>dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E09, full
            insert sequence
          Length = 1760

 Score =  355 bits (179), Expect = 1e-94
 Identities = 335/387 (86%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 242
            ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 1550 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 1491

                                                                        
Query: 243  ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 302
            | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 1490 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 1431

                                                                        
Query: 303  cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 362
            | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 1430 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 1371

                                                                        
Query: 363  gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 422
            ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 1370 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 1311

                                                                        
Query: 423  cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 482
            | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1310 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 1251

                                                                        
Query: 483  caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 542
            |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 1250 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 1191

                                       
Query: 543  tagcttctgaaatgtctgtaaggaact 569
            |||| |||||||| |||||||||||||
Sbjct: 1190 tagcctctgaaatatctgtaaggaact 1164

>gb|AF358766.1| Oryza sativa clone Osl369 xylose isomerase mRNA, partial cds
          Length = 415

 Score =  216 bits (109), Expect = 6e-53
 Identities = 235/277 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183 ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 242
           ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 277 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 218

                                                                       
Query: 243 ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 302
           | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 217 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 158

                                                                       
Query: 303 cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 362
           | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 157 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 98

                                                                       
Query: 363 gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 422
           ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 97  gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 38

                                                
Query: 423 cagagatatgggcaataaacaggtcctcaacatcagt 459
           | || ||||| || | ||||| |||||||||||||||
Sbjct: 37  ccgatatatgagccagaaacatgtcctcaacatcagt 1

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                            
Query: 372      cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 431
                |||| ||||||||| ||||||| || ||||||||||| | ||||||||| || || ||||
Sbjct: 28219467 cctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattcccgatatat 28219526

                                                       
Query: 432      gggcaataaacaggtcctcaacatcagtactctccctcc 470
                | || | ||||| ||||||||||||||||||||||||||
Sbjct: 28219527 gagccagaaacatgtcctcaacatcagtactctccctcc 28219565



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 300      cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 359
                |||| |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| |
Sbjct: 28219317 cctcaatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcat 28219376

                               
Query: 360      ccagggaaccatcct 374
                |||||||||||||||
Sbjct: 28219377 ccagggaaccatcct 28219391



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                         
Query: 513      cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaact 569
                |||||||||| ||||||||||||| ||| ||||| |||||||| |||||||||||||
Sbjct: 28219801 cattcttaaccacacttgacataaccaaagtagcctctgaaatatctgtaaggaact 28219857



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 472      caatttggcatcaaagttgaagccaccaggcgcaag 507
                ||||||||||||||||||||| |||||||| |||||
Sbjct: 28219667 caatttggcatcaaagttgaatccaccaggtgcaag 28219702

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                         
Query: 372   cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 431
             |||| ||||||||| ||||||| || ||||||||||| | ||||||||| || || ||||
Sbjct: 75012 cctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattcccgatatat 75071

                                                    
Query: 432   gggcaataaacaggtcctcaacatcagtactctccctcc 470
             | || | ||||| ||||||||||||||||||||||||||
Sbjct: 75072 gagccagaaacatgtcctcaacatcagtactctccctcc 75110



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 300   cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 359
             |||| |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| |
Sbjct: 74862 cctcaatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcat 74921

                            
Query: 360   ccagggaaccatcct 374
             |||||||||||||||
Sbjct: 74922 ccagggaaccatcct 74936



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 513   cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaact 569
             |||||||||| ||||||||||||| ||| ||||| |||||||| |||||||||||||
Sbjct: 75346 cattcttaaccacacttgacataaccaaagtagcctctgaaatatctgtaaggaact 75402



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 472   caatttggcatcaaagttgaagccaccaggcgcaag 507
             ||||||||||||||||||||| |||||||| |||||
Sbjct: 75212 caatttggcatcaaagttgaatccaccaggtgcaag 75247

>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 472   caatttggcatcaaagttgaagccaccaggcgcaagtcca 511
             ||||||||||||||||||||| ||||| || |||| ||||
Sbjct: 85708 caatttggcatcaaagttgaatccacctggtgcaattcca 85747

>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence
          Length = 154199

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 307   catggcaccaatctcagtgtcaaag 331
             |||||||||| ||||||||||||||
Sbjct: 84035 catggcaccagtctcagtgtcaaag 84011

>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence
          Length = 118017

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    aacgagtttaattttgatata 36
             |||||||||||||||||||||
Sbjct: 91024 aacgagtttaattttgatata 91004

>gb|AF027207.2|AF027207 Homo sapiens chromosome 21 clone cosmid D13C2 map 21q22.2, complete
             sequence
          Length = 37773

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 539   aaggtagcttctgaaatgtct 559
             |||||||||||||||||||||
Sbjct: 24914 aaggtagcttctgaaatgtct 24934

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 355     ctcgtccagggaaccatcctc 375
               |||||||||||||||||||||
Sbjct: 1075951 ctcgtccagggaaccatcctc 1075931

>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 539    aaggtagcttctgaaatgtct 559
              |||||||||||||||||||||
Sbjct: 323737 aaggtagcttctgaaatgtct 323717

>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 539    aaggtagcttctgaaatgtct 559
              |||||||||||||||||||||
Sbjct: 214340 aaggtagcttctgaaatgtct 214360

>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence
          Length = 174522

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 537    tcaaggtagcttctgaaatg 556
              ||||||||||||||||||||
Sbjct: 155564 tcaaggtagcttctgaaatg 155545

>gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome 8, complete sequence
          Length = 257765

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   ttctgaaatgtctgtaagga 566
             ||||||||||||||||||||
Sbjct: 47806 ttctgaaatgtctgtaagga 47825

>gb|BC041267.1| Xenopus laevis actin related protein 2/3 complex, subunit 1A, 41kDa,
            mRNA (cDNA clone MGC:52839 IMAGE:4885217), complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ttacattattttcagctcca 59
            ||||||||||||||||||||
Sbjct: 1510 ttacattattttcagctcca 1529

>ref|XM_784544.1| PREDICTED: Strongylocentrotus purpuratus similar to
            Retrovirus-related Pol polyprotein from transposon 297
            (LOC584692), partial mRNA
          Length = 1789

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   ttattttcagctccacgcag 64
            ||||||||||||||||||||
Sbjct: 1373 ttattttcagctccacgcag 1354

>emb|CR936947.2| Medicago truncatula chromosome 5 clone mte1-85h10, COMPLETE SEQUENCE
          Length = 136310

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     gaagaacgagtttaattttgatat 35
              |||||| |||||||||||||||||
Sbjct: 131309 gaagaatgagtttaattttgatat 131332

>gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51070

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   gctcttgcttttttattcct 168
             ||||||||||||||||||||
Sbjct: 21516 gctcttgcttttttattcct 21535

>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence
          Length = 188847

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   tcaaggtagcttctgaaatg 556
             ||||||||||||||||||||
Sbjct: 88380 tcaaggtagcttctgaaatg 88399

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 537      tcaaggtagcttctgaaatg 556
                ||||||||||||||||||||
Sbjct: 16981652 tcaaggtagcttctgaaatg 16981633

>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 167638

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   cagagatatgggcaataaac 442
             ||||||||||||||||||||
Sbjct: 48685 cagagatatgggcaataaac 48666

>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tgtccatcccagagatatgg 433
              ||||||||||||||||||||
Sbjct: 427085 tgtccatcccagagatatgg 427066

>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence
          Length = 159969

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    gctcttgcttttttattcct 168
              ||||||||||||||||||||
Sbjct: 112812 gctcttgcttttttattcct 112831

>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence
          Length = 169313

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   gccatggtgtccatcccaga 426
             ||||||||||||||||||||
Sbjct: 54457 gccatggtgtccatcccaga 54476

>gb|AC007034.4|AC007034 Homo sapiens BAC clone RP11-99M1 from Y, complete sequence
          Length = 149198

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 537    tcaaggtagcttctgaaatg 556
              ||||||||||||||||||||
Sbjct: 133092 tcaaggtagcttctgaaatg 133111

>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    gaagaacgagtttaattttgatat 35
             |||||| |||||||||||||||||
Sbjct: 98805 gaagaatgagtttaattttgatat 98782

>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete
              sequence
          Length = 282116

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    cagagatatgggcaataaac 442
              ||||||||||||||||||||
Sbjct: 244397 cagagatatgggcaataaac 244378

>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete
             sequence
          Length = 126095

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   cagccaattcctgtttgccc 232
             ||||||||||||||||||||
Sbjct: 43989 cagccaattcctgtttgccc 44008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,480,064
Number of Sequences: 3902068
Number of extensions: 4480064
Number of successful extensions: 82207
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82076
Number of HSP's gapped (non-prelim): 131
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)