>HDAC5_MOUSE (Q9Z2V6) Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1)|
          Length = 1113

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +2

Query: 32  LPLLQSAEQRKEQHLARTMDRLHRPESLTSDRPPETPGTKTPAYSHPGGTNQTLPQRERI 211
           L +L++ E+ KE  +A T  +L   E L S     TPG          G N +LPQ  + 
Sbjct: 155 LLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPG----------GLNHSLPQHPKC 204

Query: 212 IGLHN 226
            G H+
Sbjct: 205 WGAHH 209

>HDAC5_HUMAN (Q9UQL6) Histone deacetylase 5 (HD5) (Antigen NY-CO-9)|
          Length = 1122

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +2

Query: 32  LPLLQSAEQRKEQHLARTMDRLHRPESLTSDRPPETPGTKTPAYSHPGGTNQTLPQRERI 211
           L +L++ E+ KE  +A T  +L   E L S     TPG          G N +LPQ  + 
Sbjct: 164 LLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPG----------GLNHSLPQHPKC 213

Query: 212 IGLHN 226
            G H+
Sbjct: 214 WGAHH 218

>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = +2

Query: 23  MTSLPLLQSAEQRKEQHLARTMDRLHRPESLTSDRPPET--PGTKTP-----AYSHPGGT 181
           ++S   LQ   +   QH+      LH P+ L     P+T  PG + P     AYS    T
Sbjct: 394 VSSSATLQQQNRAAGQHITPLKKPLHSPQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPT 453

Query: 182 NQTLPQR 202
           +Q  PQ+
Sbjct: 454 SQLPPQQ 460

>TRA2_CAEBR (Q17307) Sex-determining transformer protein 2 precursor (Cb-Tra-2A)|
          Length = 1497

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 53   EQRKEQHLARTMDRLHRPESLTSDRPPETPG 145
            E+R+EQHL     R +RPES     P +TPG
Sbjct: 1471 ERRREQHLREQEARRNRPES-----PDDTPG 1496

>ADA3_YEAST (P32494) Transcriptional adapter 3 (NGG1 protein)|
          Length = 702

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 98  HRPESLTSDRPPETPGTKTPAYSHPGGTNQTLPQRERIIGLHNEQGLET 244
           ++ + +  D+    P  K P        +QTLP+    +GL NE+GLE+
Sbjct: 205 NKKQKIDVDKMENDPTVKNPKSEFV--VSQTLPRAAAALGLFNEEGLES 251

>GHRL_ANGJA (Q8JFY4) Ghrelin precursor (Ghrelin-21)|
          Length = 111

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 309 MGRRDADGILDILRRP 262
           +GRRD+DGILD+  RP
Sbjct: 47  VGRRDSDGILDLFMRP 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,661,409
Number of Sequences: 219361
Number of extensions: 1316196
Number of successful extensions: 3172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3171
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)