ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3j10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009075.1| Triticum aestivum clone wip1c.pk004.o24:fis, full... 704 0.0
2gb|BT008937.1| Triticum aestivum clone wdi1c.pk004.g19:fis, full... 680 0.0
3gb|BT009243.1| Triticum aestivum clone wlk1.pk0014.f4:fis, full ... 672 0.0
4gb|AY305028.1| Oryza sativa (japonica cultivar-group) DRE bindin... 170 3e-39
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
7dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
8dbj|AK061033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
9dbj|AK058899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
10ref|XM_450677.1| Oryza sativa (japonica cultivar-group), mRNA 168 1e-38
11gb|BT023988.1| Zea mays clone EL01N0413B03 mRNA sequence 147 4e-32
12ref|XM_507229.1| PREDICTED Oryza sativa (japonica cultivar-group... 100 8e-18
13ref|XM_482344.1| Oryza sativa (japonica cultivar-group), mRNA 100 8e-18
14gb|AY297448.1| Oryza sativa (japonica cultivar-group) AP2-domain... 100 8e-18
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
16dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
17dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
18dbj|AK105725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
19dbj|AK068312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
21gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 58 3e-05
22gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 58 3e-05
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
24gb|AY823556.1| Pennisetum glaucum DRE binding factor mRNA, parti... 56 1e-04
25gb|BT018732.1| Zea mays clone EL01N0519G04.d mRNA sequence 56 1e-04
26gb|AF493800.1| Zea mays DRE binding factor 1 (dbf1) mRNA, comple... 56 1e-04
27ref|NM_196118.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
28gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
29gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar N... 52 0.002
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
32ref|XM_467836.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
33ref|XM_506975.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.007
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
35dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
36dbj|AK105991.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
37dbj|AK105877.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
38gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.43
39gb|AY104042.1| Zea mays PCO094376 mRNA sequence 44 0.43
40emb|AJ007744.1|TSE007744 Thauera selenatis serA, serB, serD and ... 42 1.7
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
42gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.7
43gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequ... 42 1.7
44dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
45dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
46emb|AL392085.12| Human DNA sequence from clone RP11-225L6 on chr... 40 6.7
47emb|BX004886.8| Zebrafish DNA sequence from clone DKEY-33P4 in l... 40 6.7
48gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosom... 40 6.7
49emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 i... 40 6.7
50gb|AC006368.2| Homo sapiens BAC clone RP11-252C12 from 2, comple... 40 6.7
51emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 i... 40 6.7
52gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, comple... 40 6.7 
>gb|BT009075.1| Triticum aestivum clone wip1c.pk004.o24:fis, full insert mRNA
            sequence
          Length = 1777

 Score =  704 bits (355), Expect = 0.0
 Identities = 457/486 (94%), Gaps = 10/486 (2%)
 Strand = Plus / Minus

                                                                        
Query: 10   gagctgattttacatgacaagtctcccactgttacaatctgcagagcagcggaaggaaca 69
            ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 gagctaattttacatgaca-gactcccactgttacaatctgcagagcagcggaaggaaca 1658

                                                                        
Query: 70   gcacctagctagaacaatggaca----gacttcaccggccggagtcactgaccagtgacc 125
            ||||||||||||||| |||||||    |||||||||||||||||||||||||||||||||
Sbjct: 1657 gcacctagctagaaccatggacacagagacttcaccggccggagtcactgaccagtgacc 1598

                                                                        
Query: 126  gaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggagggactaacc 185
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1597 gaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggacggactaacc 1538

                                                                        
Query: 186  aaaccctacc-acaaagagaacgaatcataggtctacacaatgaacaaggattagagact 244
            |||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct: 1537 aaaccctacccacaaagagaacaaataatagatctacacaatgaacaaggattagagact 1478

                                                                        
Query: 245  tagagctaatccgctaaaggccggcgcagaatgtctaaaatgccatctgcatcgcggcga 304
            |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1477 tagagctaatccgctaaaagcccgtgcagaatgtctaaaatgccatctgcatcgcggcga 1418

                                                                        
Query: 305  cccattaacctagcatcatgacacgctaaaagacggtactggtagtagtagctgacgaag 364
            ||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||| 
Sbjct: 1417 cccattaacctagcatcatgaaacgct-aaagacggta---gtagtagtagctgacgaac 1362

                                                                        
Query: 365  atgaactgggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggta 424
            |  |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct: 1361 acaaactgggtgctaattggtggcgagaagcgagtcccagtcgatctcgtacgacgggta 1302

                                                                        
Query: 425  cttggtgagggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
            ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1301 cttggtgagggcgaagcaggctgcctcgtcccatggcgcctcgctgaagtcgagctgctg 1242

                  
Query: 485  catctc 490
            ||||||
Sbjct: 1241 catctc 1236
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>gb|BT008937.1| Triticum aestivum clone wdi1c.pk004.g19:fis, full insert mRNA
            sequence
          Length = 1771

 Score =  680 bits (343), Expect = 0.0
 Identities = 457/492 (92%), Gaps = 11/492 (2%)
 Strand = Plus / Minus

                                                                        
Query: 2    tttttgatgagctgattttacatgacaagtctcccactgttacaatctgcagagcagcgg 61
            ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1665 tttttgacgagctaattttacatgacaagactcccactgttacaatctgcagagcagcgg 1606

                                                                        
Query: 62   aaggaacagcacctagctagaacaatggaca---gacttcaccggccggagtcactgacc 118
            ||||||||||||||||||||||| |||||||   ||||| ||||||||||||||||||||
Sbjct: 1605 aaggaacagcacctagctagaaccatggacacaagacttaaccggccggagtcactgacc 1546

                                                                        
Query: 119  agtgaccgaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggaggg 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1545 agtgaccgaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggacgg 1486

                                                                        
Query: 179  actaaccaaaccctaccacaaagagaacgaatcataggtctacacaatgaacaaggatta 238
            ||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||
Sbjct: 1485 actaaccaaaccctaccacaa-gagaacaaataatagatctacacaatgaacaaggatta 1427

                                                                        
Query: 239  gagacttagagctaatccgctaaaggccggcgcagaatgtctaaaatgccatctgcatcg 298
            |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 1426 gagacttagagctaatccgctaaaagcccgtgcagaatgtctaaaatgccatctgcatcg 1367

                                                                        
Query: 299  cggcgacccattaacctagcatcatgacacgctaaaagacggtactggtagtagtagctg 358
            |||||||||||||||||| |||||||||||||| ||||||       |||||||||||||
Sbjct: 1366 cggcgacccattaacctaacatcatgacacgct-aaagac------agtagtagtagctg 1314

                                                                        
Query: 359  acgaagatgaactgggtgctaattggtggcgaggagcgagtcccagtcgatctcatagga 418
            ||||| |  ||||||||||||||||| |||||| |||||||||||||||||||| || ||
Sbjct: 1313 acgaacacaaactgggtgctaattggcggcgagaagcgagtcccagtcgatctcgtacga 1254

                                                                        
Query: 419  cgggtacttggtgagggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgag 478
            ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||
Sbjct: 1253 cgggtacttggtgagggcgaagcaggctgcctcatcccatggcgcctcgctgaagtcgag 1194

                        
Query: 479  ctgctgcatctc 490
            ||||||||||||
Sbjct: 1193 ctgctgcatctc 1182
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>gb|BT009243.1| Triticum aestivum clone wlk1.pk0014.f4:fis, full insert mRNA sequence
          Length = 1261

 Score =  672 bits (339), Expect = 0.0
 Identities = 456/492 (92%), Gaps = 11/492 (2%)
 Strand = Plus / Minus

                                                                        
Query: 2    tttttgatgagctgattttacatgacaagtctcccactgttacaatctgcagagcagcgg 61
            ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1209 tttttgacgagctaattttacatgacaagactcccactgttacaatctgcagagcagcgg 1150

                                                                        
Query: 62   aaggaacagcacctagctagaacaatggaca---gacttcaccggccggagtcactgacc 118
            ||||||||||||||||||||||| |||||||   ||||| ||||||||||||||||||||
Sbjct: 1149 aaggaacagcacctagctagaaccatggacacaagacttaaccggccggagtcactgacc 1090

                                                                        
Query: 119  agtgaccgaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggaggg 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1089 agtgaccgaccaccggagacgccgggcacaaaaacgccggcttatagtcatccgggacgg 1030

                                                                        
Query: 179  actaaccaaaccctaccacaaagagaacgaatcataggtctacacaatgaacaaggatta 238
            ||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||
Sbjct: 1029 actaaccaaaccctaccacaa-gagaacaaataatagatctacacaatgaacaaggatta 971

                                                                        
Query: 239  gagacttagagctaatccgctaaaggccggcgcagaatgtctaaaatgccatctgcatcg 298
            |||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 970  gagagttagagctaatccgctaaaagcccgtgcagaatgtctaaaatgccatctgcatcg 911

                                                                        
Query: 299  cggcgacccattaacctagcatcatgacacgctaaaagacggtactggtagtagtagctg 358
            |||||||||||||||||| |||||||||||||| ||||||       |||||||||||||
Sbjct: 910  cggcgacccattaacctaacatcatgacacgct-aaagac------agtagtagtagctg 858

                                                                        
Query: 359  acgaagatgaactgggtgctaattggtggcgaggagcgagtcccagtcgatctcatagga 418
            ||||| |  ||||||||||||||||| |||||| |||||||||||||||||||| || ||
Sbjct: 857  acgaacacaaactgggtgctaattggcggcgagaagcgagtcccagtcgatctcgtacga 798

                                                                        
Query: 419  cgggtacttggtgagggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgag 478
            ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||
Sbjct: 797  cgggtacttggtgagggcgaagcaggctgcctcatcccatggcgcctcgctgaagtcgag 738

                        
Query: 479  ctgctgcatctc 490
            ||||||||||||
Sbjct: 737  ctgctgcatctc 726
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>gb|AY305028.1| Oryza sativa (japonica cultivar-group) DRE binding factor  2 (DBF2)
            mRNA, complete cds
          Length = 1403

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                        
Query: 373  ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
            |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 1180 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 1121

                                                                      
Query: 433  gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
            |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 1120 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 1063



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 270  gcagaatgtctaaaatgccatctgca 295
            |||||||||||||||| |||||||||
Sbjct: 1269 gcagaatgtctaaaatcccatctgca 1244
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                            
Query: 373      ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
                |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 12164092 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 12164033

                                                                          
Query: 433      gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
                |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 12164032 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 12163975



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 56/64 (87%), Gaps = 4/64 (6%)
 Strand = Plus / Minus

                                                                            
Query: 101      cggccggagtcactgaccagtgaccgaccaccggag----acgccgggcacaaaaacgcc 156
                |||||||||| || |||||||||||| |||||||||    ||||||| ||||||||||||
Sbjct: 12164404 cggccggagtaaccgaccagtgaccggccaccggagacgcacgccggacacaaaaacgcc 12164345

                    
Query: 157      ggct 160
                ||||
Sbjct: 12164344 ggct 12164341



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 270      gcagaatgtctaaaatgccatctgca 295
                |||||||||||||||| |||||||||
Sbjct: 12164181 gcagaatgtctaaaatcccatctgca 12164156
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1759_F09
          Length = 149501

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                         
Query: 373   ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
             |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 75551 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 75492

                                                                       
Query: 433   gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
             |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 75491 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 75434



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 56/64 (87%), Gaps = 4/64 (6%)
 Strand = Plus / Minus

                                                                         
Query: 101   cggccggagtcactgaccagtgaccgaccaccggag----acgccgggcacaaaaacgcc 156
             |||||||||| || |||||||||||| |||||||||    ||||||| ||||||||||||
Sbjct: 75863 cggccggagtaaccgaccagtgaccggccaccggagacgcacgccggacacaaaaacgcc 75804

                 
Query: 157   ggct 160
             ||||
Sbjct: 75803 ggct 75800



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 270   gcagaatgtctaaaatgccatctgca 295
             |||||||||||||||| |||||||||
Sbjct: 75640 gcagaatgtctaaaatcccatctgca 75615
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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0564H06
          Length = 146823

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                         
Query: 373   ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
             |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 98471 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 98412

                                                                       
Query: 433   gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
             |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 98411 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 98354



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 56/64 (87%), Gaps = 4/64 (6%)
 Strand = Plus / Minus

                                                                         
Query: 101   cggccggagtcactgaccagtgaccgaccaccggag----acgccgggcacaaaaacgcc 156
             |||||||||| || |||||||||||| |||||||||    ||||||| ||||||||||||
Sbjct: 98783 cggccggagtaaccgaccagtgaccggccaccggagacgcacgccggacacaaaaacgcc 98724

                 
Query: 157   ggct 160
             ||||
Sbjct: 98723 ggct 98720



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 270   gcagaatgtctaaaatgccatctgca 295
             |||||||||||||||| |||||||||
Sbjct: 98560 gcagaatgtctaaaatcccatctgca 98535
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>dbj|AK061033.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H09, full
           insert sequence
          Length = 1019

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                       
Query: 373 ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
           |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 559 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 500

                                                                     
Query: 433 gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
           |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 499 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 442



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 56/64 (87%), Gaps = 4/64 (6%)
 Strand = Plus / Minus

                                                                       
Query: 101 cggccggagtcactgaccagtgaccgaccaccggag----acgccgggcacaaaaacgcc 156
           |||||||||| || |||||||||||| |||||||||    ||||||| ||||||||||||
Sbjct: 871 cggccggagtaaccgaccagtgaccggccaccggagacgcacgccggacacaaaaacgcc 812

               
Query: 157 ggct 160
           ||||
Sbjct: 811 ggct 808



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 270 gcagaatgtctaaaatgccatctgca 295
           |||||||||||||||| |||||||||
Sbjct: 648 gcagaatgtctaaaatcccatctgca 623
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>dbj|AK058899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A04, full
           insert sequence
          Length = 902

 Score =  170 bits (86), Expect = 3e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                       
Query: 373 ggtgctaattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtga 432
           |||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 411 ggtgttaattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtga 352

                                                                     
Query: 433 gggcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
           |||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 351 gggcgaaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 294



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 56/64 (87%), Gaps = 4/64 (6%)
 Strand = Plus / Minus

                                                                       
Query: 101 cggccggagtcactgaccagtgaccgaccaccggag----acgccgggcacaaaaacgcc 156
           |||||||||| || |||||||||||| |||||||||    ||||||| ||||||||||||
Sbjct: 723 cggccggagtaaccgaccagtgaccggccaccggagacgcacgccggacacaaaaacgcc 664

               
Query: 157 ggct 160
           ||||
Sbjct: 663 ggct 660



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 270 gcagaatgtctaaaatgccatctgca 295
           |||||||||||||||| |||||||||
Sbjct: 500 gcagaatgtctaaaatcccatctgca 475
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>ref|XM_450677.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 876

 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                       
Query: 378 taattggtggcgaggagcgagtcccagtcgatctcataggacgggtacttggtgagggcg 437
           ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 875 taattggcggcgaggagggagtcccagtcgatctcgtaggacgggtacttggtgagggcg 816

                                                                
Query: 438 aagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
           ||| |||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 815 aaggcggcggcctcgtcccacggcgcctcgctgaagtcgagctgctgcatctc 763
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>gb|BT023988.1| Zea mays clone EL01N0413B03 mRNA sequence
          Length = 1494

 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                       
Query: 385 tggcgaggagcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccgg 444
           |||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 878 tggcgaggagggagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaagccgg 819

                                                         
Query: 445 ctgcctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
           | ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 818 cggcctcgtcccacggcgcctcgctgaagtccagctgctgcatctc 773
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>ref|XM_507229.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453D01.40 mRNA
          Length = 1657

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 393  agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
            |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 1320 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 1261

                                                  
Query: 453  tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
            ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 1260 tcccacggcacctcgctgaagtccagctgctccatctc 1223
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>ref|XM_482344.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1652

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 393  agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
            |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 1322 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 1263

                                                  
Query: 453  tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
            ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 1262 tcccacggcacctcgctgaagtccagctgctccatctc 1225
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>gb|AY297448.1| Oryza sativa (japonica cultivar-group) AP2-domain DRE binding
           factor DBF1 mRNA, complete cds
          Length = 926

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                       
Query: 393 agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
           |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 892 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 833

                                                 
Query: 453 tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
           ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 832 tcccacggcacctcgctgaagtccagctgctccatctc 795
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                            
Query: 393      agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
                |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 19541407 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 19541348

                                                      
Query: 453      tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
                ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 19541347 tcccacggcacctcgctgaagtccagctgctccatctc 19541310
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>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0042B03
          Length = 167669

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                         
Query: 393   agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
             |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 16967 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 16908

                                                   
Query: 453   tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
             ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 16907 tcccacggcacctcgctgaagtccagctgctccatctc 16870
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>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0453D01
          Length = 147461

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                          
Query: 393    agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
              |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 136164 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 136105

                                                    
Query: 453    tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
              ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 136104 tcccacggcacctcgctgaagtccagctgctccatctc 136067
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>dbj|AK105725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G08, full
            insert sequence
          Length = 1652

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 393  agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
            |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 1322 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 1263

                                                  
Query: 453  tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
            ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 1262 tcccacggcacctcgctgaagtccagctgctccatctc 1225
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>dbj|AK068312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K12, full
            insert sequence
          Length = 1657

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 393  agcgagtcccagtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcg 452
            |||||||||||||||||||| || ||||||||||||||||| ||||| ||  | ||||||
Sbjct: 1319 agcgagtcccagtcgatctcgtacgacgggtacttggtgagcgcgaacccctccgcctcg 1260

                                                  
Query: 453  tcccatggtgcctcgctgaagtcgagctgctgcatctc 490
            ||||| ||  ||||||||||||| ||||||| ||||||
Sbjct: 1259 tcccacggcacctcgctgaagtccagctgctccatctc 1222
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 404      gtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcgtcccatggtgc 463
                ||||||||| ||||||||||||||| | | ||||||| | || | |||| |||| |||||
Sbjct: 17214989 gtcgatctcgtaggacgggtacttgttta-ggcgaaggcagcagactcgccccacggtgc 17214931

                                 
Query: 464      ctcgctgaagtcgagct 480
                ||||||||||| |||||
Sbjct: 17214930 ctcgctgaagtggagct 17214914



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                         
Query: 449     ctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
               |||||||||||| |||||   |||||||||| ||||||||||
Sbjct: 4762305 ctcgtcccatggcgcctccgagaagtcgagcagctgcatctc 4762346
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                         
Query: 404   gtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcgtcccatggtgc 463
             ||||||||| ||||||||||||||| | | ||||||| | || | |||| |||| |||||
Sbjct: 47733 gtcgatctcgtaggacgggtacttgttta-ggcgaaggcagcagactcgccccacggtgc 47675

                              
Query: 464   ctcgctgaagtcgagct 480
             ||||||||||| |||||
Sbjct: 47674 ctcgctgaagtggagct 47658
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
              sequence
          Length = 153247

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                          
Query: 404    gtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcgtcccatggtgc 463
              ||||||||| ||||||||||||||| | | ||||||| | || | |||| |||| |||||
Sbjct: 106382 gtcgatctcgtaggacgggtacttgttta-ggcgaaggcagcagactcgccccacggtgc 106324

                               
Query: 464    ctcgctgaagtcgagct 480
              ||||||||||| |||||
Sbjct: 106323 ctcgctgaagtggagct 106307
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 404      gtcgatctcataggacgggtacttggtgagggcgaagccggctgcctcgtcccatggtgc 463
                ||||||||| ||||||||||||||| | | ||||||| | || | |||| |||| |||||
Sbjct: 17208558 gtcgatctcgtaggacgggtacttgttta-ggcgaaggcagcagactcgccccacggtgc 17208500

                                 
Query: 464      ctcgctgaagtcgagct 480
                ||||||||||| |||||
Sbjct: 17208499 ctcgctgaagtggagct 17208483



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                         
Query: 449     ctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
               |||||||||||| |||||   |||||||||| ||||||||||
Sbjct: 4762420 ctcgtcccatggcgcctccgagaagtcgagcagctgcatctc 4762461
to top
>gb|AY823556.1| Pennisetum glaucum DRE binding factor mRNA, partial cds
          Length = 489

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 385 tggcgaggagcgagtcccagtcgatctcataggacgggtacttg 428
           ||||||| || | ||||||||||||||| |||||||||||||||
Sbjct: 229 tggcgagcagggcgtcccagtcgatctcgtaggacgggtacttg 186
to top
>gb|BT018732.1| Zea mays clone EL01N0519G04.d mRNA sequence
          Length = 1550

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 393  agcgagtcccagtcgatctcataggacgggtacttg 428
            |||| ||||||||||||||| |||||||||||||||
Sbjct: 1261 agcgcgtcccagtcgatctcgtaggacgggtacttg 1226



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 136  gacgccgggcacaaaaacgccggc 159
            |||||||| |||||||||||||||
Sbjct: 1439 gacgccggtcacaaaaacgccggc 1416
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>gb|AF493800.1| Zea mays DRE binding factor 1 (dbf1) mRNA, complete cds
          Length = 1042

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 393 agcgagtcccagtcgatctcataggacgggtacttg 428
           |||| ||||||||||||||| |||||||||||||||
Sbjct: 755 agcgcgtcccagtcgatctcgtaggacgggtacttg 720



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 136 gacgccgggcacaaaaacgccggc 159
           |||||||| |||||||||||||||
Sbjct: 933 gacgccggtcacaaaaacgccggc 910
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>ref|NM_196118.1| Oryza sativa (japonica cultivar-group) putative AP2-domain
           transcriptional regulator (OJ1208D02.13), mRNA
          Length = 966

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 435 gcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
           ||||||||| | |||||||||||||| |||||  ||||||| ||||||||
Sbjct: 914 gcgaagccgtcggcctcgtcccatggcgcctccgtgaagtccagctgctg 865
to top
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
             complete sequence
          Length = 131922

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 435   gcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
             ||||||||| | |||||||||||||| |||||  ||||||| ||||||||
Sbjct: 24796 gcgaagccgtcggcctcgtcccatggcgcctccgtgaagtccagctgctg 24747
to top
>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OJ1208D02 from chromosome 10, complete sequence
          Length = 120132

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 435   gcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
             ||||||||| | |||||||||||||| |||||  ||||||| ||||||||
Sbjct: 84928 gcgaagccgtcggcctcgtcccatggcgcctccgtgaagtccagctgctg 84879
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 435      gcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
                ||||||||| | |||||||||||||| |||||  ||||||| ||||||||
Sbjct: 11216808 gcgaagccgtcggcctcgtcccatggcgcctccgtgaagtccagctgctg 11216759
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 435      gcgaagccggctgcctcgtcccatggtgcctcgctgaagtcgagctgctg 484
                ||||||||| | |||||||||||||| |||||  ||||||| ||||||||
Sbjct: 11223248 gcgaagccgtcggcctcgtcccatggcgcctccgtgaagtccagctgctg 11223199
to top
>ref|XM_467836.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1393

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 396  gagtcccagtcgatctcataggacgggtacttg 428
            |||||||||||||||||  ||||||||||||||
Sbjct: 1039 gagtcccagtcgatctcccaggacgggtacttg 1007
to top
>ref|XM_506975.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.10 mRNA
          Length = 1654

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 396  gagtcccagtcgatctcataggacgggtacttg 428
            |||||||||||||||||  ||||||||||||||
Sbjct: 1281 gagtcccagtcgatctcccaggacgggtacttg 1249
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 396      gagtcccagtcgatctcataggacgggtacttg 428
                |||||||||||||||||  ||||||||||||||
Sbjct: 31668527 gagtcccagtcgatctcccaggacgggtacttg 31668495
to top
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 396   gagtcccagtcgatctcataggacgggtacttg 428
             |||||||||||||||||  ||||||||||||||
Sbjct: 48314 gagtcccagtcgatctcccaggacgggtacttg 48282
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>dbj|AK105991.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H01, full
            insert sequence
          Length = 1393

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 396  gagtcccagtcgatctcataggacgggtacttg 428
            |||||||||||||||||  ||||||||||||||
Sbjct: 1039 gagtcccagtcgatctcccaggacgggtacttg 1007
to top
>dbj|AK105877.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C05, full
            insert sequence
          Length = 1654

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 396  gagtcccagtcgatctcataggacgggtacttg 428
            |||||||||||||||||  ||||||||||||||
Sbjct: 1281 gagtcccagtcgatctcccaggacgggtacttg 1249
to top
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 449   ctcgtcccatggtgcctcgctgaagtcgagctgctgcatctc 490
             |||||||||||| |||||   |||||||||| ||||||||||
Sbjct: 73150 ctcgtcccatggcgcctccgagaagtcgagcagctgcatctc 73109
to top
>gb|AY104042.1| Zea mays PCO094376 mRNA sequence
          Length = 918

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 399 tcccagtcgatctcataggacgggtacttg 428
           ||||||||||||||  ||||||||||||||
Sbjct: 518 tcccagtcgatctcccaggacgggtacttg 489
to top
>emb|AJ007744.1|TSE007744 Thauera selenatis serA, serB, serD and serC genes
          Length = 8213

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 425  cttggtgagggcgaagccggc 445
            |||||||||||||||||||||
Sbjct: 8168 cttggtgagggcgaagccggc 8148
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 182      aaccaaaccctaccacaaagagaac 206
                ||||||||||||| |||||||||||
Sbjct: 23950666 aaccaaaccctacaacaaagagaac 23950690
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 335     agacggtactggtagtagtag 355
               |||||||||||||||||||||
Sbjct: 2353879 agacggtactggtagtagtag 2353859
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>gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequence
          Length = 158596

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 45     aatctgcagagcagcggaagg 65
              |||||||||||||||||||||
Sbjct: 112362 aatctgcagagcagcggaagg 112382
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   aaccaaaccctaccacaaagagaac 206
             ||||||||||||| |||||||||||
Sbjct: 97070 aaccaaaccctacaacaaagagaac 97094
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>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0090K04
          Length = 152556

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   aaccaaaccctaccacaaagagaac 206
             ||||||||||||| |||||||||||
Sbjct: 65188 aaccaaaccctacaacaaagagaac 65212
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>emb|AL392085.12| Human DNA sequence from clone RP11-225L6 on chromosome 9 Contains
            part of the ASTN2 gene for astrotactin2 (KIAA0634),
            complete sequence
          Length = 159836

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 223  caatgaacaaggattagagactta 246
            |||||||||||||||| |||||||
Sbjct: 2711 caatgaacaaggattaaagactta 2734
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>emb|BX004886.8| Zebrafish DNA sequence from clone DKEY-33P4 in linkage group 10,
             complete sequence
          Length = 125715

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   cagaatgtctaaaatgccat 290
             ||||||||||||||||||||
Sbjct: 15758 cagaatgtctaaaatgccat 15777
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>gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosome 15, complete
             sequence
          Length = 217298

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   gtctaaaatgccatctgcat 296
             ||||||||||||||||||||
Sbjct: 81878 gtctaaaatgccatctgcat 81859
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>emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 in linkage group 10,
              complete sequence
          Length = 247227

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    cagaatgtctaaaatgccat 290
              ||||||||||||||||||||
Sbjct: 213605 cagaatgtctaaaatgccat 213624
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>gb|AC006368.2| Homo sapiens BAC clone RP11-252C12 from 2, complete sequence
          Length = 171089

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   tctaaaatgccatctgcatc 297
             ||||||||||||||||||||
Sbjct: 52822 tctaaaatgccatctgcatc 52803
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>emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 in linkage group 10,
              complete sequence
          Length = 184574

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    cagaatgtctaaaatgccat 290
              ||||||||||||||||||||
Sbjct: 180028 cagaatgtctaaaatgccat 180009
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>gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, complete sequence
          Length = 164789

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acctagctagaacaatggac 91
             ||||||||||||||||||||
Sbjct: 94889 acctagctagaacaatggac 94870


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,974,957
Number of Sequences: 3902068
Number of extensions: 2974957
Number of successful extensions: 51013
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50667
Number of HSP's gapped (non-prelim): 329
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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