ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
2dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
3dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
4ref|NM_191117.1| Oryza sativa (japonica cultivar-group), predic... 246 6e-62
5gb|AY112460.1| Zea mays CL9078_1 mRNA sequence 236 6e-59
6dbj|AK121753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
7dbj|AK104245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
8dbj|AK061354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
9gb|AY104861.1| Zea mays PCO082817 mRNA sequence 167 5e-38
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
11dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
12gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 123 6e-25
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
14ref|NM_188559.1| Oryza sativa (japonica cultivar-group), predic... 109 1e-20
15dbj|AK059314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
16gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, comple... 72 2e-09
17gb|AY639792.1| Triticum monococcum clone BE636979_1.H8TM genomic... 66 1e-07
18gb|AY639790.1| Triticum monococcum clone BE636979_1.G6TM genomic... 66 1e-07
19gb|AY639788.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
20gb|AY639783.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
21gb|AY639778.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
22gb|AY639776.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
23gb|AY639773.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
24gb|AY639768.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 66 1e-07
25gb|AY639789.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 64 5e-07
26gb|AY639786.1| Thinopyrum elongatum clone BE636979_1.G11AT2LE ge... 64 5e-07
27gb|AY639777.1| Aegilops tauschii clone BE636979_1.E4AT2 genomic ... 64 5e-07
28gb|AY639766.1| Thinopyrum elongatum clone BE636979_1.8537LE geno... 64 5e-07
29dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
30dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
31gb|AY103934.1| Zea mays PCO140136 mRNA sequence 64 5e-07
32gb|AY639794.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 62 2e-06
33gb|AY639791.1| Aegilops tauschii clone BE636979_1.H3AT1 genomic ... 62 2e-06
34gb|AY639787.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 62 2e-06
35gb|AY639780.1| Triticum urartu clone BE636979_1.E6TU2 genomic se... 62 2e-06
36gb|AY639771.1| Aegilops tauschii clone BE636979_1.B9AT1 genomic ... 62 2e-06
37gb|AY639784.1| Triticum urartu clone BE636979_1.F6TU1 genomic se... 60 8e-06
38gb|AY639772.1| Triticum monococcum clone BE636979_1.B9TM genomic... 60 8e-06
39gb|AY639770.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 60 8e-06
40gb|AY639782.1| Hordeum vulgare subsp. spontaneum clone BE636979_... 58 3e-05
41gb|AY639767.1| Thinopyrum elongatum clone BE636979_1.A12AT2LE ge... 58 3e-05
42gb|AY639793.1| Triticum urartu clone BE636979_1.H8TU1 genomic se... 56 1e-04
43gb|AY639775.1| Triticum urartu clone BE636979_1.D6TU1 genomic se... 56 1e-04
44gb|AY639774.1| Triticum urartu clone BE636979_1.C9TU1 genomic se... 56 1e-04
45gb|AY639769.1| Triticum urartu clone BE636979_1.B2TU1 genomic se... 56 1e-04
46gb|AY639785.1| Triticum monococcum clone BE636979_1.F9TM genomic... 54 5e-04
47gb|AY639781.1| Triticum monococcum clone BE636979_1.E7TM genomic... 48 0.031
48gb|DQ294276.1| Solanum tuberosum clone 171G04 putative 24 kDa se... 48 0.031
49gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 46 0.12
50gb|AC102350.14| Mus musculus chromosome 9, clone RP23-323P3, com... 44 0.48
51gb|AC113470.14| Mus musculus chromosome 9, clone RP23-262N17, co... 44 0.48
52gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds 42 1.9
53gb|AY639779.1| Triticum monococcum clone BE636979_1.E6TM genomic... 42 1.9
54emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chr... 42 1.9
55gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
56gb|AC090136.6| Homo sapiens chromosome 8, clone RP11-21C4, compl... 42 1.9
57gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromo... 42 1.9
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
59gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q1... 42 1.9
60gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
61gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome... 40 7.4
62gb|AF435089.1| Prunus persica beta-1,3-glucanase (Gns3) gene, co... 40 7.4
63gb|AC122271.4| Mus musculus BAC clone RP23-222D3 from 18, comple... 40 7.4
64gb|AC009022.10| Homo sapiens chromosome 16 clone RP11-106J23, co... 40 7.4
65ref|XM_774760.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.4
66emb|AL139087.13| Human DNA sequence from clone RP11-83D23 on chr... 40 7.4
67emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.4
68gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, compl... 40 7.4
69gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.4
70gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Can... 40 7.4
71gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Canc... 40 7.4
72gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cance... 40 7.4
73gb|AC016710.7| Homo sapiens BAC clone RP11-241E11 from 2, comple... 40 7.4
74dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 40 7.4
75gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 7.4
76gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, com... 40 7.4
77emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on ch... 40 7.4
78gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosom... 40 7.4 
>dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G09, full
           insert sequence
          Length = 1325

 Score =  250 bits (126), Expect = 4e-63
 Identities = 246/286 (86%)
 Strand = Plus / Minus

                                                                       
Query: 264 atctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttca 323
           |||||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||
Sbjct: 898 atctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttca 839

                                                                       
Query: 324 aagatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttg 383
           |||| |||||| |||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 838 aagagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttg 779

                                                                       
Query: 384 tcatcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgac 443
           || ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||  ||
Sbjct: 778 tcctcatacttctcatacagtactggcacagtgtagagcgccacaaaaactatgtagaac 719

                                                                       
Query: 444 aatgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcaca 503
           || ||||||||||| |||| ||| |||||||| || |||| |||||| ||  | ||||||
Sbjct: 718 aaagtcaaaaagttacagctgctaccaagaactgacagaatccagagtccagcgatcaca 659

                                                         
Query: 504 atgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 658 atgaggaacttcttcagatcacggccatgaccaatctccctcaagg 613
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>dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H02, full
           insert sequence
          Length = 1181

 Score =  250 bits (126), Expect = 4e-63
 Identities = 246/286 (86%)
 Strand = Plus / Minus

                                                                       
Query: 264 atctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttca 323
           |||||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||
Sbjct: 889 atctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttca 830

                                                                       
Query: 324 aagatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttg 383
           |||| |||||| |||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 829 aagagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttg 770

                                                                       
Query: 384 tcatcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgac 443
           || ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||  ||
Sbjct: 769 tcctcatacttctcatacagtactggcacagtgtagagcgccacaaaaactatgtagaac 710

                                                                       
Query: 444 aatgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcaca 503
           || ||||||||||| |||| ||| |||||||| || |||| |||||| ||  | ||||||
Sbjct: 709 aaagtcaaaaagttacagctgctaccaagaactgacagaatccagagtccagcgatcaca 650

                                                         
Query: 504 atgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 649 atgaggaacttcttcagatcacggccatgaccaatctccctcaagg 604
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>dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H05, full
           insert sequence
          Length = 731

 Score =  250 bits (126), Expect = 4e-63
 Identities = 246/286 (86%)
 Strand = Plus / Minus

                                                                       
Query: 264 atctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttca 323
           |||||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||
Sbjct: 409 atctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttca 350

                                                                       
Query: 324 aagatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttg 383
           |||| |||||| |||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 349 aagagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttg 290

                                                                       
Query: 384 tcatcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgac 443
           || ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||  ||
Sbjct: 289 tcctcatacttctcatacagtactggcacagtgtagagcgccacaaaaactatgtagaac 230

                                                                       
Query: 444 aatgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcaca 503
           || ||||||||||| |||| ||| |||||||| || |||| |||||| ||  | ||||||
Sbjct: 229 aaagtcaaaaagttacagctgctaccaagaactgacagaatccagagtccagcgatcaca 170

                                                         
Query: 504 atgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 169 atgaggaacttcttcagatcacggccatgaccaatctccctcaagg 124
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>ref|NM_191117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score =  246 bits (124), Expect = 6e-62
 Identities = 244/284 (85%)
 Strand = Plus / Minus

                                                                       
Query: 266 ctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaaa 325
           |||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||||
Sbjct: 762 ctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttcaaa 703

                                                                       
Query: 326 gatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgtc 385
           || |||||| |||||||| || || |||   |||||||||||||||||||||||||||||
Sbjct: 702 gagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttgtc 643

                                                                       
Query: 386 atcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaa 445
            ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||  ||||
Sbjct: 642 ctcatacttctcatacagtactggcacagtgtagagcgccacaaaaactatgtagaacaa 583

                                                                       
Query: 446 tgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaat 505
            ||||||||||| |||| ||| |||||||| || |||| |||||| ||  | ||||||||
Sbjct: 582 agtcaaaaagttacagctgctaccaagaactgacagaatccagagtccagcgatcacaat 523

                                                       
Query: 506 gaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 522 gaggaacttcttcagatcacggccatgaccaatctccctcaagg 479
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>gb|AY112460.1| Zea mays CL9078_1 mRNA sequence
          Length = 686

 Score =  236 bits (119), Expect = 6e-59
 Identities = 218/251 (86%)
 Strand = Plus / Plus

                                                                       
Query: 291 cccttcgggatcttcgacaggaccttctcttcaaagatggcataatacttcttcaactcg 350
           ||||| || |||||||| |||  |||||| || || |||||||||||||||||||  || 
Sbjct: 343 ccctttggaatcttcgataggcacttctcatcgaaaatggcataatacttcttcagttca 402

                                                                       
Query: 351 atcatggccttctcaccaaaagcatcaaccttgtcatcatacttctcatacagaactggg 410
            |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 403 gtcatagccttctcaccaaaagcatcaaccttgtcctcatatttctcatacagaactggt 462

                                                                       
Query: 411 acagtgtacagcaccacaaagactatatatgacaatgtcaaaaagttgcagcagctccca 470
           |||||||||||  |||||||||| |||||  ||| |||||  ||||||||||||||||| 
Sbjct: 463 acagtgtacagtgccacaaagacaatatagaacagtgtcaggaagttgcagcagctcccg 522

                                                                       
Query: 471 agaacagaaagaacccagagccctccaatcacaatgaggaatttcttcagatcacgacca 530
           ||||| ||||||| |||||| ||| |||| ||||| |||||||||||||||||||| |||
Sbjct: 523 agaactgaaagaagccagagacctgcaataacaattaggaatttcttcagatcacggcca 582

                      
Query: 531 tgaccaatctc 541
           || ||||||||
Sbjct: 583 tgcccaatctc 593
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>dbj|AK121753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P17, full
           insert sequence
          Length = 1106

 Score =  184 bits (93), Expect = 2e-43
 Identities = 237/285 (83%)
 Strand = Plus / Minus

                                                                       
Query: 265 tctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaa 324
           |||| ||||||||||||||||| | |||||| |||||||| || |||   ||||| || |
Sbjct: 822 tctaatgcttcttgtttttcaacggacccttggggatcttagagaggcatttctcatcga 763

                                                                       
Query: 325 agatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgt 384
           | || ||||| ||||||||||  ||||||||||||||||| ||||||||||| |  | ||
Sbjct: 762 aaatagcatagtacttcttcagttcgatcatggccttctctccaaaagcatcgatttggt 703

                                                                       
Query: 385 catcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgaca 444
           | |||||||||||||||||||| || || |||||||| |||| ||||||||| ||  |||
Sbjct: 702 cctcatacttctcatacagaacaggcacggtgtacagtaccataaagactatgtagaaca 643

                                                                       
Query: 445 atgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaa 504
           | ||||  || ||||||||||||||||||||||| ||||||||||| ||  | |  ||||
Sbjct: 642 aggtcaggaaattgcagcagctcccaagaacagagagaacccagagacccacgacaacaa 583

                                                        
Query: 505 tgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           | || ||||||||||| ||| | || ||||||||||| |||||||
Sbjct: 582 tcagaaatttcttcaggtcatgcccttgaccaatctccctcaagg 538
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>dbj|AK104245.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D08, full
           insert sequence
          Length = 1039

 Score =  184 bits (93), Expect = 2e-43
 Identities = 237/285 (83%)
 Strand = Plus / Minus

                                                                       
Query: 265 tctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaa 324
           |||| ||||||||||||||||| | |||||| |||||||| || |||   ||||| || |
Sbjct: 839 tctaatgcttcttgtttttcaacggacccttggggatcttagagaggcatttctcatcga 780

                                                                       
Query: 325 agatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgt 384
           | || ||||| ||||||||||  ||||||||||||||||| ||||||||||| |  | ||
Sbjct: 779 aaatagcatagtacttcttcagttcgatcatggccttctctccaaaagcatcgatttggt 720

                                                                       
Query: 385 catcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgaca 444
           | |||||||||||||||||||| || || |||||||| |||| ||||||||| ||  |||
Sbjct: 719 cctcatacttctcatacagaacaggcacggtgtacagtaccataaagactatgtagaaca 660

                                                                       
Query: 445 atgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaa 504
           | ||||  || ||||||||||||||||||||||| ||||||||||| ||  | |  ||||
Sbjct: 659 aggtcaggaaattgcagcagctcccaagaacagagagaacccagagacccacgacaacaa 600

                                                        
Query: 505 tgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           | || ||||||||||| ||| | || ||||||||||| |||||||
Sbjct: 599 tcagaaatttcttcaggtcatgcccttgaccaatctccctcaagg 555
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>dbj|AK061354.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G11, full
           insert sequence
          Length = 1138

 Score =  176 bits (89), Expect = 5e-41
 Identities = 236/285 (82%)
 Strand = Plus / Minus

                                                                       
Query: 265 tctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaa 324
           |||| ||||||||||||||||| | |||||  |||||||| || |||   ||||| || |
Sbjct: 864 tctaatgcttcttgtttttcaacggaccctcggggatcttagagaggcatttctcatcga 805

                                                                       
Query: 325 agatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgt 384
           | || ||||| ||||||||||  ||||||||||||||||| ||||||||||| |  | ||
Sbjct: 804 aaatagcatagtacttcttcagttcgatcatggccttctctccaaaagcatcgatttggt 745

                                                                       
Query: 385 catcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgaca 444
           | |||||||||||||||||||| || || |||||||| |||| ||||||||| ||  |||
Sbjct: 744 cctcatacttctcatacagaacaggcacggtgtacagtaccataaagactatgtagaaca 685

                                                                       
Query: 445 atgtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaa 504
           | ||||  || ||||||||||||||||||||||| ||||||||||| ||  | |  ||||
Sbjct: 684 aggtcaggaaattgcagcagctcccaagaacagagagaacccagagacccacgacaacaa 625

                                                        
Query: 505 tgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
           | || ||||||||||| ||| | || ||||||||||| |||||||
Sbjct: 624 tcagaaatttcttcaggtcatgcccttgaccaatctccctcaagg 580
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>gb|AY104861.1| Zea mays PCO082817 mRNA sequence
          Length = 1190

 Score =  167 bits (84), Expect = 5e-38
 Identities = 231/280 (82%)
 Strand = Plus / Minus

                                                                       
Query: 270 tgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaaagatg 329
           |||||||||| ||| || |  |||||||| ||||| || |||   ||||| || ||||||
Sbjct: 860 tgcttcttgtcttttaatgggcccttcggaatctttgataggcatttctcgtcgaagatg 801

                                                                       
Query: 330 gcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgtcatca 389
           || || ||| |||||| ||||| |||||||||||||||||||||||||||||| || |||
Sbjct: 800 gcgtagtacctcttcagctcgaccatggccttctcaccaaaagcatcaaccttatcctca 741

                                                                       
Query: 390 tacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaatgtc 449
           |  ||||||||||| || || ||||||||||| |||| ||| ||||| || ||||| || 
Sbjct: 740 tgtttctcatacaggaccggtacagtgtacagtaccataaaaactatgtaagacaaggtg 681

                                                                       
Query: 450 aaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaatgagg 509
           |  || |||||||||||||||||||||||||| | ||| || ||| |||||||||| || 
Sbjct: 680 aggaaattgcagcagctcccaagaacagaaaggatccacagtcctgcaatcacaatcaga 621

                                                   
Query: 510 aatttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| || ||| | || || |||||||| |||||||
Sbjct: 620 aatttcttgaggtcatggccttggccaatctccctcaagg 581
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 5e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                            
Query: 264      atctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttca 323
                |||||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||
Sbjct: 30733551 atctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttca 30733492

                                                                            
Query: 324      aagatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttg 383
                |||| |||||| |||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 30733491 aagagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttg 30733432

                                                               
Query: 384      tcatcatacttctcatacagaactgggacagtgtacagcaccacaaa 430
                || ||||||||||||||||| ||||| |||||||| ||| |||||||
Sbjct: 30733431 tcctcatacttctcatacagtactggcacagtgtagagcgccacaaa 30733385



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                 
Query: 501      acaatgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
                ||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 30733137 acaatgaggaacttcttcagatcacggccatgaccaatctccctcaagg 30733089



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 387     tcatacttctcatacagaactgggacagtgtacagcaccacaaa 430
               ||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 6968662 tcatacttctcatacagaattgggactgtgtgcagcaccacaaa 6968619



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 447     gtcaaaaagttgcagcagctcccaagaacagaaag 481
               ||||| |||||||||||||| ||||||||||||||
Sbjct: 6968503 gtcaagaagttgcagcagcttccaagaacagaaag 6968469



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 442      acaatgtcaaaaagttgcagcagctcccaagaacagaaagaacccagag 490
                |||| ||||||||||| |||| ||| |||||||| || |||| ||||||
Sbjct: 30733288 acaaagtcaaaaagttacagctgctaccaagaactgacagaatccagag 30733240
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score =  157 bits (79), Expect = 5e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                         
Query: 264   atctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttca 323
             |||||||||||||| | |||||||| |||||| || |||||||| |||   |||||||||
Sbjct: 22826 atctagtgcttcttatctttcaaaggacccttgggaatcttcgataggcatttctcttca 22767

                                                                         
Query: 324   aagatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttg 383
             |||| |||||| |||||||| || || |||   |||||||||||||||||||||||||||
Sbjct: 22766 aagagggcatagtacttcttaaattcaatctcagccttctcaccaaaagcatcaaccttg 22707

                                                            
Query: 384   tcatcatacttctcatacagaactgggacagtgtacagcaccacaaa 430
             || ||||||||||||||||| ||||| |||||||| ||| |||||||
Sbjct: 22706 tcctcatacttctcatacagtactggcacagtgtagagcgccacaaa 22660



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 501   acaatgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
             ||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 22412 acaatgaggaacttcttcagatcacggccatgaccaatctccctcaagg 22364



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 442   acaatgtcaaaaagttgcagcagctcccaagaacagaaagaacccagag 490
             |||| ||||||||||| |||| ||| |||||||| || |||| ||||||
Sbjct: 22563 acaaagtcaaaaagttacagctgctaccaagaactgacagaatccagag 22515
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>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                         
Query: 265   tctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaa 324
             |||| ||||||||||||||||| | |||||| |||||||| || |||   ||||| || |
Sbjct: 76761 tctaatgcttcttgtttttcaacggacccttggggatcttagagaggcatttctcatcga 76820

                                                                         
Query: 325   agatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgt 384
             | || ||||| ||||||||||  ||||||||||||||||| ||||||||||| |  | ||
Sbjct: 76821 aaatagcatagtacttcttcagttcgatcatggccttctctccaaaagcatcgatttggt 76880

                                                               
Query: 385   catcatacttctcatacagaactgggacagtgtacagcaccacaaagact 434
             | |||||||||||||||||||| || || |||||||| |||| |||||||
Sbjct: 76881 cctcatacttctcatacagaacaggcacggtgtacagtaccataaagact 76930



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 456   ttgcagcagctcccaagaacagaaagaacccagag 490
             ||||||||||||||||||||||| |||||||||||
Sbjct: 77028 ttgcagcagctcccaagaacagagagaacccagag 77062



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 501   acaatgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
             ||||| || ||||||||||| ||| | || ||||||||||| |||||||
Sbjct: 77174 acaatcagaaatttcttcaggtcatgcccttgaccaatctccctcaagg 77222
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                            
Query: 265      tctagtgcttcttgtttttcaaagcacccttcgggatcttcgacaggaccttctcttcaa 324
                |||| ||||||||||||||||| | |||||| |||||||| || |||   ||||| || |
Sbjct: 25973634 tctaatgcttcttgtttttcaacggacccttggggatcttagagaggcatttctcatcga 25973693

                                                                            
Query: 325      agatggcataatacttcttcaactcgatcatggccttctcaccaaaagcatcaaccttgt 384
                | || ||||| ||||||||||  ||||||||||||||||| ||||||||||| |  | ||
Sbjct: 25973694 aaatagcatagtacttcttcagttcgatcatggccttctctccaaaagcatcgatttggt 25973753

                                                                  
Query: 385      catcatacttctcatacagaactgggacagtgtacagcaccacaaagact 434
                | |||||||||||||||||||| || || |||||||| |||| |||||||
Sbjct: 25973754 cctcatacttctcatacagaacaggcacggtgtacagtaccataaagact 25973803



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 456      ttgcagcagctcccaagaacagaaagaacccagag 490
                ||||||||||||||||||||||| |||||||||||
Sbjct: 25973901 ttgcagcagctcccaagaacagagagaacccagag 25973935



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 501      acaatgaggaatttcttcagatcacgaccatgaccaatctctctcaagg 549
                ||||| || ||||||||||| ||| | || ||||||||||| |||||||
Sbjct: 25974047 acaatcagaaatttcttcaggtcatgcccttgaccaatctccctcaagg 25974095
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>ref|NM_188559.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score =  109 bits (55), Expect = 1e-20
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                       
Query: 387 tcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaat 446
           ||||||||||||||||||| |||||| |||| |||||||||||| || |||||   ||| 
Sbjct: 719 tcatacttctcatacagaattgggactgtgtgcagcaccacaaacacaatataaaccaag 660

                                                                       
Query: 447 gtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaatg 506
           ||||| |||||||||||||| |||||||||||||| | ||| || ||  |||||||||| 
Sbjct: 659 gtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcacaata 600

                      
Query: 507 aggaatttctt 517
           ||||| |||||
Sbjct: 599 aggaacttctt 589
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>dbj|AK059314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G12, full
           insert sequence
          Length = 834

 Score =  109 bits (55), Expect = 1e-20
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                       
Query: 387 tcatacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaat 446
           ||||||||||||||||||| |||||| |||| |||||||||||| || |||||   ||| 
Sbjct: 418 tcatacttctcatacagaattgggactgtgtgcagcaccacaaacacaatataaaccaag 359

                                                                       
Query: 447 gtcaaaaagttgcagcagctcccaagaacagaaagaacccagagccctccaatcacaatg 506
           ||||| |||||||||||||| |||||||||||||| | ||| || ||  |||||||||| 
Sbjct: 358 gtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcacaata 299

                      
Query: 507 aggaatttctt 517
           ||||| |||||
Sbjct: 298 aggaacttctt 288
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>gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, complete sequence
          Length = 1197

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 390 tacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaatgtc 449
           |||||||||||||| || || || |||| ||||||||||||||| || ||   ||| | |
Sbjct: 438 tacttctcatacaggacaggtactgtgtgcagcaccacaaagacaatgtaaaccaaggac 497

                                           
Query: 450 aaaaagttgcagcagctcccaagaacagaaag 481
           || |||||||||||||| ||||||||||||||
Sbjct: 498 aagaagttgcagcagcttccaagaacagaaag 529
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>gb|AY639792.1| Triticum monococcum clone BE636979_1.H8TM genomic sequence
          Length = 974

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 969 ttcttcaggtcacgaccatgaccaatctctctcaagg 933
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>gb|AY639790.1| Triticum monococcum clone BE636979_1.G6TM genomic sequence
          Length = 971

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 971 ttcttcaggtcacgaccatgaccaatctctctcaagg 935
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>gb|AY639788.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.G4BL genomic
           sequence
          Length = 998

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 997 ttcttcaggtcacgaccatgaccaatctctctcaagg 961
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>gb|AY639783.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.F6BL genomic
           sequence
          Length = 999

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 998 ttcttcaggtcacgaccatgaccaatctctctcaagg 962
to top
>gb|AY639778.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.E6BL genomic
           sequence
          Length = 1001

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 999 ttcttcaggtcacgaccatgaccaatctctctcaagg 963
to top
>gb|AY639776.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.E1BL genomic
           sequence
          Length = 997

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 997 ttcttcaggtcacgaccatgaccaatctctctcaagg 961
to top
>gb|AY639773.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.C5BL genomic
           sequence
          Length = 998

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 997 ttcttcaggtcacgaccatgaccaatctctctcaagg 961
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>gb|AY639768.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.B12BL genomic
           sequence
          Length = 1001

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 513 ttcttcagatcacgaccatgaccaatctctctcaagg 549
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 999 ttcttcaggtcacgaccatgaccaatctctctcaagg 963
to top
>gb|AY639789.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.G5BL genomic
           sequence
          Length = 998

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||||||||||||||||
Sbjct: 998 tcttcaggtcacgaccatgaccaatctctctcaagg 963
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>gb|AY639786.1| Thinopyrum elongatum clone BE636979_1.G11AT2LE genomic sequence
          Length = 967

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||||||||||||||||
Sbjct: 967 tcttcaggtcacgaccatgaccaatctctctcaagg 932
to top
>gb|AY639777.1| Aegilops tauschii clone BE636979_1.E4AT2 genomic sequence
          Length = 952

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||||||||||||||||
Sbjct: 951 tcttcaggtcacgaccatgaccaatctctctcaagg 916
to top
>gb|AY639766.1| Thinopyrum elongatum clone BE636979_1.8537LE genomic sequence
          Length = 966

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||||||||||||||||
Sbjct: 966 tcttcaggtcacgaccatgaccaatctctctcaagg 931
to top
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492F05
          Length = 159242

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 387    tcatacttctcatacagaactgggacagtgtacagcaccacaaa 430
              ||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 136386 tcatacttctcatacagaattgggactgtgtgcagcaccacaaa 136343



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 447    gtcaaaaagttgcagcagctcccaagaacagaaag 481
              ||||| |||||||||||||| ||||||||||||||
Sbjct: 136227 gtcaagaagttgcagcagcttccaagaacagaaag 136193
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>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E07
          Length = 159440

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 387   tcatacttctcatacagaactgggacagtgtacagcaccacaaa 430
             ||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 90480 tcatacttctcatacagaattgggactgtgtgcagcaccacaaa 90437



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 447   gtcaaaaagttgcagcagctcccaagaacagaaag 481
             ||||| |||||||||||||| ||||||||||||||
Sbjct: 90321 gtcaagaagttgcagcagcttccaagaacagaaag 90287
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>gb|AY103934.1| Zea mays PCO140136 mRNA sequence
          Length = 1116

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                       
Query: 390 tacttctcatacagaactgggacagtgtacagcaccacaaagactatatatgacaatgtc 449
           |||||||| ||||| || || || |||| ||||||||||||||| || ||    || |||
Sbjct: 782 tacttctcgtacaggacaggtactgtgtgcagcaccacaaagacaatgtaaactaaggtc 723

                                           
Query: 450 aaaaagttgcagcagctcccaagaacagaaag 481
           || |||||||||||||| ||||||||||||||
Sbjct: 722 aagaagttgcagcagcttccaagaacagaaag 691
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>gb|AY639794.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.H9BL genomic
           sequence
          Length = 997

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||||||||||||||||
Sbjct: 997 cttcaggtcacgaccatgaccaatctctctcaagg 963
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>gb|AY639791.1| Aegilops tauschii clone BE636979_1.H3AT1 genomic sequence
          Length = 953

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||||||||||||||||
Sbjct: 953 cttcaggtcacgaccatgaccaatctctctcaagg 919
to top
>gb|AY639787.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.G2BL genomic
           sequence
          Length = 995

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||||||||||||||||
Sbjct: 995 cttcaggtcacgaccatgaccaatctctctcaagg 961
to top
>gb|AY639780.1| Triticum urartu clone BE636979_1.E6TU2 genomic sequence
          Length = 967

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||||||||||||||||
Sbjct: 967 cttcaggtcacgaccatgaccaatctctctcaagg 933
to top
>gb|AY639771.1| Aegilops tauschii clone BE636979_1.B9AT1 genomic sequence
          Length = 962

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||||||||||||||||
Sbjct: 962 cttcaggtcacgaccatgaccaatctctctcaagg 928
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>gb|AY639784.1| Triticum urartu clone BE636979_1.F6TU1 genomic sequence
          Length = 969

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 516 ttcagatcacgaccatgaccaatctctctcaagg 549
           ||||| ||||||||||||||||||||||||||||
Sbjct: 969 ttcaggtcacgaccatgaccaatctctctcaagg 936
to top
>gb|AY639772.1| Triticum monococcum clone BE636979_1.B9TM genomic sequence
          Length = 967

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 516 ttcagatcacgaccatgaccaatctctctcaagg 549
           ||||| ||||||||||||||||||||||||||||
Sbjct: 967 ttcaggtcacgaccatgaccaatctctctcaagg 934
to top
>gb|AY639770.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.B5BL genomic
           sequence
          Length = 995

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 516 ttcagatcacgaccatgaccaatctctctcaagg 549
           ||||| ||||||||||||||||||||||||||||
Sbjct: 995 ttcaggtcacgaccatgaccaatctctctcaagg 962
to top
>gb|AY639782.1| Hordeum vulgare subsp. spontaneum clone BE636979_1.F1BL genomic
           sequence
          Length = 994

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 517 tcagatcacgaccatgaccaatctctctcaagg 549
           |||| ||||||||||||||||||||||||||||
Sbjct: 994 tcaggtcacgaccatgaccaatctctctcaagg 962
to top
>gb|AY639767.1| Thinopyrum elongatum clone BE636979_1.A12AT2LE genomic sequence
          Length = 964

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 517 tcagatcacgaccatgaccaatctctctcaagg 549
           |||| ||||||||||||||||||||||||||||
Sbjct: 964 tcaggtcacgaccatgaccaatctctctcaagg 932
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>gb|AY639793.1| Triticum urartu clone BE636979_1.H8TU1 genomic sequence
          Length = 955

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||| ||||||||||||
Sbjct: 955 tcttcaggtcacgaccatgaccagtctctctcaagg 920
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>gb|AY639775.1| Triticum urartu clone BE636979_1.D6TU1 genomic sequence
          Length = 955

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||| ||||||||||||
Sbjct: 955 tcttcaggtcacgaccatgaccagtctctctcaagg 920
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>gb|AY639774.1| Triticum urartu clone BE636979_1.C9TU1 genomic sequence
          Length = 956

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||| ||||||||||||
Sbjct: 956 tcttcaggtcacgaccatgaccagtctctctcaagg 921
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>gb|AY639769.1| Triticum urartu clone BE636979_1.B2TU1 genomic sequence
          Length = 958

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 514 tcttcagatcacgaccatgaccaatctctctcaagg 549
           ||||||| ||||||||||||||| ||||||||||||
Sbjct: 958 tcttcaggtcacgaccatgaccagtctctctcaagg 923
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>gb|AY639785.1| Triticum monococcum clone BE636979_1.F9TM genomic sequence
          Length = 955

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 515 cttcagatcacgaccatgaccaatctctctcaagg 549
           |||||| ||||||||||||||| ||||||||||||
Sbjct: 955 cttcaggtcacgaccatgaccagtctctctcaagg 921
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>gb|AY639781.1| Triticum monococcum clone BE636979_1.E7TM genomic sequence
          Length = 957

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 526 gaccatgaccaatctctctcaagg 549
           ||||||||||||||||||||||||
Sbjct: 957 gaccatgaccaatctctctcaagg 934
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>gb|DQ294276.1| Solanum tuberosum clone 171G04 putative 24 kDa seed maturation
           protein-like protein mRNA, complete cds
          Length = 1080

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 357 gccttctcaccaaaagcatcaaccttgtcatcatacttctcata 400
           ||||||||| ||||||||||||||| ||| ||| | ||||||||
Sbjct: 741 gccttctcagcaaaagcatcaacctggtcctcaaatttctcata 698
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>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 419    cagcaccacaaagactatatatgacaa 445
              ||||||||||||||| |||||||||||
Sbjct: 156796 cagcaccacaaagacaatatatgacaa 156770
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>gb|AC102350.14| Mus musculus chromosome 9, clone RP23-323P3, complete sequence
          Length = 211216

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 526   gaccatgaccaatctctctcaa 547
             ||||||||||||||||||||||
Sbjct: 31312 gaccatgaccaatctctctcaa 31333
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>gb|AC113470.14| Mus musculus chromosome 9, clone RP23-262N17, complete sequence
          Length = 202838

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 526  gaccatgaccaatctctctcaa 547
            ||||||||||||||||||||||
Sbjct: 9406 gaccatgaccaatctctctcaa 9385
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>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 480 agaacccagagccctccaatcacaatgaggaatttcttcagatca 524
           ||||||||||| ||  ||||||||   ||||||||||||||||||
Sbjct: 401 agaacccagagaccagcaatcacaccaaggaatttcttcagatca 357
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>gb|AY639779.1| Triticum monococcum clone BE636979_1.E6TM genomic sequence
          Length = 955

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 529 catgaccaatctctctcaagg 549
           |||||||||||||||||||||
Sbjct: 955 catgaccaatctctctcaagg 935
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>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a
             novel gene,  the FOXP4 gene for forkhead box P4 and five
             CpG islands, complete sequence
          Length = 180547

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    caatgataatgcctaacattt 34
             |||||||||||||||||||||
Sbjct: 21846 caatgataatgcctaacattt 21826
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>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0096I10, complete sequence
          Length = 171946

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 437   atatgacaatgtcaaaaagtt 457
             |||||||||||||||||||||
Sbjct: 31486 atatgacaatgtcaaaaagtt 31506
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>gb|AC090136.6| Homo sapiens chromosome 8, clone RP11-21C4, complete sequence
          Length = 186304

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 474   acagaaagaacccagagccct 494
             |||||||||||||||||||||
Sbjct: 43645 acagaaagaacccagagccct 43665
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>gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromosome unknown, complete
             sequence
          Length = 197508

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    caatgataatgcctaacattt 34
             |||||||||||||||||||||
Sbjct: 53129 caatgataatgcctaacattt 53149
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 437      atatgacaatgtcaaaaagtt 457
                |||||||||||||||||||||
Sbjct: 24377503 atatgacaatgtcaaaaagtt 24377483
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>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence
          Length = 237705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 474    acagaaagaacccagagccct 494
              |||||||||||||||||||||
Sbjct: 121184 acagaaagaacccagagccct 121164
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 437      atatgacaatgtcaaaaagtt 457
                |||||||||||||||||||||
Sbjct: 24689172 atatgacaatgtcaaaaagtt 24689152
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>gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome 6, complete sequence
          Length = 225612

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     aatgcctaacatttctggct 40
              ||||||||||||||||||||
Sbjct: 181099 aatgcctaacatttctggct 181118
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>gb|AF435089.1| Prunus persica beta-1,3-glucanase (Gns3) gene, complete cds
          Length = 3657

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 471  agaacagaaagaacccagag 490
            ||||||||||||||||||||
Sbjct: 3096 agaacagaaagaacccagag 3115
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>gb|AC122271.4| Mus musculus BAC clone RP23-222D3 from 18, complete sequence
          Length = 199493

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   agtgtacagcaccacaaaga 432
             ||||||||||||||||||||
Sbjct: 60829 agtgtacagcaccacaaaga 60810
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>gb|AC009022.10| Homo sapiens chromosome 16 clone RP11-106J23, complete sequence
          Length = 190577

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    aacagaaagaacccagagcc 492
              ||||||||||||||||||||
Sbjct: 100382 aacagaaagaacccagagcc 100363
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>ref|XM_774760.1| Giardia lamblia ATCC 50803 hypothetical protein
            (GLP_170_127707_130622) partial mRNA
          Length = 2916

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 368  aaaagcatcaaccttgtcatcata 391
            |||||||||| |||||||||||||
Sbjct: 1638 aaaagcatcatccttgtcatcata 1615
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>emb|AL139087.13| Human DNA sequence from clone RP11-83D23 on chromosome 13q31.3-33.1,
              complete sequence
          Length = 170776

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    tatatgtactagtatcaagt 166
              ||||||||||||||||||||
Sbjct: 138597 tatatgtactagtatcaagt 138616
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>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   cccttcgggatcttcgacag 310
             ||||||||||||||||||||
Sbjct: 81688 cccttcgggatcttcgacag 81669
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>gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, complete sequence
          Length = 168606

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    aagatggcataatacttctt 343
              ||||||||||||||||||||
Sbjct: 114927 aagatggcataatacttctt 114946
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     cccttcgggatcttcgacag 310
               ||||||||||||||||||||
Sbjct: 4061317 cccttcgggatcttcgacag 4061298
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>gb|AC097268.10| Pan troglodytes  BAC RP43-43O8 (Roswell Park Cancer Institute) complete
              sequence
          Length = 241278

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 473    aacagaaagaacccagagcc 492
              ||||||||||||||||||||
Sbjct: 212768 aacagaaagaacccagagcc 212787
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>gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   acaaagactatatatgacaa 445
             ||||||||||||||||||||
Sbjct: 92301 acaaagactatatatgacaa 92282
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>gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 181763

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aatgcctaacatttctggct 40
             ||||||||||||||||||||
Sbjct: 23383 aatgcctaacatttctggct 23402
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>gb|AC016710.7| Homo sapiens BAC clone RP11-241E11 from 2, complete sequence
          Length = 95836

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    gctgaacgttgaaaaataag 78
             ||||||||||||||||||||
Sbjct: 24298 gctgaacgttgaaaaataag 24317
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    acgaccatgaccaatctctc 543
              ||||||||||||||||||||
Sbjct: 412457 acgaccatgaccaatctctc 412476
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     caatgataatgcctaacatt 33
              ||||||||||||||||||||
Sbjct: 839021 caatgataatgcctaacatt 839040
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>gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, complete sequence
          Length = 213004

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 405   actgggacagtgtacagcaccacaaaga 432
             |||||||||||||||| |||||||||||
Sbjct: 93626 actgggacagtgtaca-caccacaaaga 93600
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>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete
              sequence
          Length = 205405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    aatgaggaatttcttcagat 522
              ||||||||||||||||||||
Sbjct: 111140 aatgaggaatttcttcagat 111121
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>gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosome 7, complete sequence
          Length = 190473

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 405   actgggacagtgtacagcaccacaaaga 432
             |||||||||||||||| |||||||||||
Sbjct: 71802 actgggacagtgtaca-caccacaaaga 71828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,531,226
Number of Sequences: 3902068
Number of extensions: 5531226
Number of successful extensions: 100388
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 100059
Number of HSP's gapped (non-prelim): 326
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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