>NIPM_HUMAN (O43920) NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-15 kDa) (CI-15 kDa)
          Length = 105

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = -3

Query: 483 VDGGEEEEAMASGWGINGNKGRCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHS 313
           +  GE+   MA         GRC+ F   W++ +  +   R   +C +  +D++ECL   
Sbjct: 19  IQSGEQPYKMA---------GRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQ 69

Query: 312 KEFQRRNRI 286
           K  +R   I
Sbjct: 70  KTMRRAGTI 78

>TBB1_PORPU (P50259) Tubulin beta-1 chain (Beta-1 tubulin)|
          Length = 457

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -3

Query: 510 ERRKGEAAKVDGGEEEEAMASGWGINGNK 424
           E ++ EAA V+G EEE+A A G  +NG++
Sbjct: 421 ELQQYEAATVEGEEEEDAYAEGAVVNGDQ 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,512,022
Number of Sequences: 219361
Number of extensions: 732715
Number of successful extensions: 2005
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)