ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd3i05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M24, full insert sequence Length = 1941 Score = 204 bits (103), Expect = 2e-49 Identities = 214/251 (85%) Strand = Plus / Minus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||||||||||||||||||| |||| || ||||| || || Sbjct: 1774 gtcttctcgctgctgtagcacatgtagaggaagccatcgtcctcatctttgtatgactcg 1715 Query: 230 tacacgctgcccatcaggttacctgtttggggcaaggtgttgctcacaaacacgaaaagc 289 ||||| ||||||||||| | | | || |||||||| |||||| | |||||||| || || Sbjct: 1714 tacacactgcccatcagctgagcagtctggggcaacgtgttgttgacaaacacaaacagt 1655 Query: 290 gccgttcctggagacagatgtaacctggagcgcaggatgaaaatgaactgcccaactggc 349 || |||||||||||||||||||||| || || || |||||||| ||||||||||||||| Sbjct: 1654 gctattcctggagacagatgtaaccttgaacgaagtatgaaaataaactgcccaactggc 1595 Query: 350 atgtcgcatggaaccaggtacttcctcttttccatctctggaaggttactcctcgaaaac 409 ||||| |||||||| |||||||| | ||| ||||| |||||||| |||| || |||||| Sbjct: 1594 atgtcacatggaactaggtacttgcgcttctccatttctggaagactacttcttgaaaac 1535 Query: 410 ctttcaacaat 420 || |||||||| Sbjct: 1534 ctctcaacaat 1524 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 422 acggggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctcc 481 |||||||||||| ||||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 115 acggggatcctggcggggtaggaggcgatcatggaggccgactccttggccctctcctcc 56 Query: 482 agggtgaactccttcttgaagg 503 ||||||||||||| |||||||| Sbjct: 55 agggtgaactcctccttgaagg 34
>ref|XM_466067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 219 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 209 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 150 Query: 230 tacacgctgcccatcaggttacctgtttggggcaaggtgttgctcacaaacacgaaaagc 289 ||||| ||||||||||| | | | || |||||||| |||||| | |||||||| || | | Sbjct: 149 tacacactgcccatcagctgagcagtctggggcaaagtgttgttgacaaacacaaacaac 90 Query: 290 gccgttcctggagacagatgta 311 || |||||||||| || ||||| Sbjct: 89 gctgttcctggaggcaaatgta 68 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 56 tccatttctggaagattactcctcgaaaa 28
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| || |||||||||| ||||| |||| Sbjct: 520 tggggcaaagtgttgttgacaaacacaaacaacgctgtccctggagacaaatgtagcctg 579 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || || || |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 580 gaacgaagtatgaaaataaactgcccaactggcatgttacatggaaccaggtac 633 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 346 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 405 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 406 tacacactgcccatcag 422 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 425 gggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 2891 gggatcctgtcggggtaggaggcgatcatggcggccgactccttggccctctcctc 2946 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 713 tccatttctggaagattactcctcgaaaa 741
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| || |||||||||| ||||| |||| Sbjct: 520 tggggcaaagtgttgttgacaaacacaaacaacgctgtccctggagacaaatgtagcctg 579 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || || || |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 580 gaacgaagtatgaaaataaactgcccaactggcatgttacatggaaccaggtac 633 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 346 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 405 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 406 tacacactgcccatcag 422 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 425 gggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 2891 gggatcctgtcggggtaggaggcgatcatggcggccgactccttggccctctcctc 2946 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 713 tccatttctggaagattactcctcgaaaa 741
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| || |||||||||| ||||| |||| Sbjct: 520 tggggcaaagtgttgttgacaaacacaaacaacgctgtccctggagacaaatgtagcctg 579 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || || || |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 580 gaacgaagtatgaaaataaactgcccaactggcatgttacatggaaccaggtac 633 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 346 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 405 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 406 tacacactgcccatcag 422 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 425 gggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 2891 gggatcctgtcggggtaggaggcgatcatggcggccgactccttggccctctcctc 2946 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 713 tccatttctggaagattactcctcgaaaa 741
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| |||||||||| || ||||| |||| Sbjct: 19442829 tggggcaaagtgttgttgacaaacacaaacaacgctgttcctggaggcaaatgtagcctg 19442888 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || | || |||||||| || |||||||||||||||| ||||||||||||||| Sbjct: 19442889 gaatgaagtatgaaaataaagtgcccaactggcatgttacatggaaccaggtac 19442942 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 19442653 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 19442712 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 19442713 tacacactgcccatcag 19442729 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 19443022 tccatttctggaagattactcctcgaaaa 19443050
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| |||||||||| || ||||| |||| Sbjct: 60356 tggggcaaagtgttgttgacaaacacaaacaacgctgttcctggaggcaaatgtagcctg 60415 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || | || |||||||| || |||||||||||||||| ||||||||||||||| Sbjct: 60416 gaatgaagtatgaaaataaagtgcccaactggcatgttacatggaaccaggtac 60469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 60180 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 60239 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 60240 tacacactgcccatcag 60256 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 60549 tccatttctggaagattactcctcgaaaa 60577
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 257 tggggcaaggtgttgctcacaaacacgaaaagcgccgttcctggagacagatgtaacctg 316 |||||||| |||||| | |||||||| || | ||| |||||||||| || ||||| |||| Sbjct: 128320 tggggcaaagtgttgttgacaaacacaaacaacgctgttcctggaggcaaatgtagcctg 128379 Query: 317 gagcgcaggatgaaaatgaactgcccaactggcatgtcgcatggaaccaggtac 370 || | || |||||||| || |||||||||||||||| ||||||||||||||| Sbjct: 128380 gaatgaagtatgaaaataaagtgcccaactggcatgttacatggaaccaggtac 128433 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 170 gtcttctcgctgctgtagcacatgtagaggaagccatcctccttgtccttgtacgaatca 229 |||||||||||||||||||||| ||||||||||||||| ||| || ||||| || ||| Sbjct: 128144 gtcttctcgctgctgtagcacaagtagaggaagccatcgccctcatctttgtatgactca 128203 Query: 230 tacacgctgcccatcag 246 ||||| ||||||||||| Sbjct: 128204 tacacactgcccatcag 128220 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tccatctctggaaggttactcctcgaaaa 408 ||||| |||||||| |||||||||||||| Sbjct: 128513 tccatttctggaagattactcctcgaaaa 128541
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 422 acggggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 |||||||||||| ||||||| ||||||||||| ||||||||| || ||||||||||| Sbjct: 1277 acggggatcctggcggggtaggaggcgatcatggaggccgactccttggccctctcctc 1335 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 ccagggtgaactccttcttgaagg 503 ||||||||||||||| |||||||| Sbjct: 1407 ccagggtgaactcctccttgaagg 1430
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 422 acggggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 |||||||||||| ||||||| ||||||||||| ||||||||| || ||||||||||| Sbjct: 1277 acggggatcctggcggggtaggaggcgatcatggaggccgactccttggccctctcctc 1335 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 ccagggtgaactccttcttgaagg 503 ||||||||||||||| |||||||| Sbjct: 1407 ccagggtgaactcctccttgaagg 1430
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 422 acggggatcctgccggggtacttggcgatcatggcggccgactcattcgccctctcctc 480 |||||||||||| ||||||| ||||||||||| ||||||||| || ||||||||||| Sbjct: 1277 acggggatcctggcggggtaggaggcgatcatggaggccgactccttggccctctcctc 1335 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 ccagggtgaactccttcttgaagg 503 ||||||||||||||| |||||||| Sbjct: 1407 ccagggtgaactcctccttgaagg 1430
>gb|AY058219.1| Pichia pastoris Paz2 (PAZ2) gene, complete cds Length = 378 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 352 gtcgcatggaaccaggtacttcctcttttccatctctggaa 392 ||||||||||||||||||||||| ||| || | |||||||| Sbjct: 162 gtcgcatggaaccaggtacttccgcttatctacctctggaa 122
>gb|AF209724.1|AF209724 Oryctolagus cuniculus chloride channel CLC-6 (CLCN6) mRNA, complete cds Length = 2610 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 gaaggatttcatcctcctcctcct 522 |||||||||||||||||||||||| Sbjct: 130 gaaggatttcatcctcctcctcct 107
>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06, complete sequence Length = 147676 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 512 ctcctcctccttgctgcttctt 533 |||||||||||||||||||||| Sbjct: 89094 ctcctcctccttgctgcttctt 89115
>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05, complete sequence Length = 169500 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 510 tcctcctcctccttgctgcttc 531 |||||||||||||||||||||| Sbjct: 68983 tcctcctcctccttgctgcttc 69004
>gb|DQ078759.1| Saccharum officinarum microtubule associated protein 1A/1B light chain 3 mRNA, partial cds Length = 303 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 173 ttctcgctgctgtagcacatgtagaggaagccatcctc 210 ||||||| ||||||| ||||||||||||||| ||||| Sbjct: 287 ttctcgccgctgtaggtcatgtagaggaagccgtcctc 250
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 512 ctcctcctccttgctgcttctt 533 |||||||||||||||||||||| Sbjct: 4976687 ctcctcctccttgctgcttctt 4976708
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttc 531 |||||||||||||||||||||| Sbjct: 9119741 tcctcctcctccttgctgcttc 9119720
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttc 531 |||||||||||||||||||||| Sbjct: 9124880 tcctcctcctccttgctgcttc 9124859
>ref|XM_511657.1| PREDICTED: Pan troglodytes similar to Cdc42 effector protein 4; binder of Rho GTPases 4 (LOC454859), mRNA Length = 1261 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1253 ggatttcatcctcctcctcct 1233
>gb|DQ213289.1| Taeniopygia guttata clone 0061P0020D04 microtubule-associated protein 1 light chain 3 alpha-like mRNA, complete sequence Length = 1100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 389 catgtagaggaagccatcctc 369
>gb|BC106474.1| Xenopus laevis cDNA clone MGC:131197 IMAGE:7210851, complete cds Length = 849 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 atgtcgcatggaaccaggtacttcc 374 |||||| |||||||||||||||||| Sbjct: 165 atgtcggatggaaccaggtacttcc 141
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 143077 ggcttgctgaattgcaggcag 143057
>ref|XM_417327.1| PREDICTED: Gallus gallus similar to Zgc:77094 (LOC419142), mRNA Length = 1133 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 543 catgtagaggaagccatcctc 523
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 61060 ggcttgctgaattgcaggcag 61040
>ref|XM_881920.1| PREDICTED: Bos taurus similar to microtubule-associated protein 1 light chain 3 alpha, transcript variant 2 (LOC514547), mRNA Length = 987 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 507 catgtagaggaagccatcctc 487
>ref|XM_592416.2| PREDICTED: Bos taurus similar to microtubule-associated protein 1 light chain 3 alpha, transcript variant 1 (LOC514547), mRNA Length = 679 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 478 catgtagaggaagccatcctc 458
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cacgctgcccatcaggttacc 252 ||||||||||||||||||||| Sbjct: 897347 cacgctgcccatcaggttacc 897367
>ref|NM_012121.4| Homo sapiens CDC42 effector protein (Rho GTPase binding) 4 (CDC42EP4), mRNA Length = 3121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1287 ggatttcatcctcctcctcct 1267
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 28877765 ggcttgctgaattgcaggcag 28877745
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 ctcctcctccttgctgcttct 532 ||||||||||||||||||||| Sbjct: 61061 ctcctcctccttgctgcttct 61081
>gb|BC113348.1| Bos taurus similar to microtubule-associated protein 1 light chain 3 alpha, transcript variant 2, mRNA (cDNA clone MGC:138125 IMAGE:8086938), complete cds Length = 984 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 470 catgtagaggaagccatcctc 450
>gb|BC010451.1| Homo sapiens CDC42 effector protein (Rho GTPase binding) 4, mRNA (cDNA clone MGC:17125 IMAGE:4181539), complete cds Length = 3072 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1263 ggatttcatcctcctcctcct 1243
>emb|AJ313100.1|TAE313100 Triticum aestivum partial phya2 gene for phytochrome A, exons 1-2 Length = 2645 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 1589 ggcttgctgaattgcaggcag 1609
>emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytochrome A, exons 1-4 Length = 6323 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 3728 ggcttgctgaattgcaggcag 3748
>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 214065 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 505 tttcatcctcctcctccttgctgct 529 |||||||||||||||| |||||||| Sbjct: 199121 tttcatcctcctcctctttgctgct 199097
>gb|AC087301.8| Homo sapiens chromosome 17, clone RP11-661C3, complete sequence Length = 229153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 163921 ggatttcatcctcctcctcct 163901
>dbj|AK097835.1| Homo sapiens cDNA FLJ40516 fis, clone TESTI2046569, highly similar to Homo sapiens Borg4 mRNA Length = 2879 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1066 ggatttcatcctcctcctcct 1046
>dbj|AK027385.1| Homo sapiens cDNA FLJ14479 fis, clone MAMMA1002143, highly similar to Homo sapiens Cdc42 effector protein 4 mRNA Length = 3087 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1278 ggatttcatcctcctcctcct 1258
>dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA for phytochrome A, complete cds Length = 3866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 1982 ggcttgctgaattgcaggcag 2002
>gb|AC156393.12| Mus musculus 10 BAC RP24-315E6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164936 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 atttcatcctcctcctccttgctgcttct 532 |||||||| ||||||||||| |||||||| Sbjct: 96751 atttcatcttcctcctccttcctgcttct 96723
>gb|AC158639.8| Mus musculus 10 BAC RP24-73H17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199191 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 504 atttcatcctcctcctccttgctgcttct 532 |||||||| ||||||||||| |||||||| Sbjct: 109217 atttcatcttcctcctccttcctgcttct 109245
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 28969187 ggcttgctgaattgcaggcag 28969167
>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome Length = 9979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 6463 ggcttgctgaattgcaggcag 6483
>ref|XM_316251.2| Anopheles gambiae str. PEST ENSANGP00000017693 (ENSANGG00000015204), partial mRNA Length = 3088 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ctccagggtgaactccttctt 498 ||||||||||||||||||||| Sbjct: 1492 ctccagggtgaactccttctt 1472
>dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125J06, full insert sequence Length = 3903 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 2030 ggcttgctgaattgcaggcag 2050
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacgctgcccatcaggttacc 252 ||||||||||||||||||||| Sbjct: 4975229 cacgctgcccatcaggttacc 4975209
>dbj|AK065707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035O04, full insert sequence Length = 3649 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggcttgctgaattgcaggcag 152 ||||||||||||||||||||| Sbjct: 1321 ggcttgctgaattgcaggcag 1301
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cacgctgcccatcaggttacc 252 ||||||||||||||||||||| Sbjct: 734166 cacgctgcccatcaggttacc 734186
>gb|AY610451.1| Sus scrofa clone rmed11c_g21.y1.abd, mRNA sequence Length = 644 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 catgtagaggaagccatcctc 210 ||||||||||||||||||||| Sbjct: 466 catgtagaggaagccatcctc 446
>gb|AC132121.3| Mus musculus BAC clone RP24-62L21 from 13, complete sequence Length = 204277 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 tcctcctccttgctgcttctt 533 ||||||||||||||||||||| Sbjct: 3272 tcctcctccttgctgcttctt 3292
>gb|BC002774.1| Homo sapiens CDC42 effector protein (Rho GTPase binding) 4, mRNA (cDNA clone MGC:3740 IMAGE:3617435), complete cds Length = 3122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1287 ggatttcatcctcctcctcct 1267
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 tcctcctccttgctgcttctt 533 ||||||||||||||||||||| Sbjct: 200252 tcctcctccttgctgcttctt 200272
>dbj|AB042237.1| Homo sapiens Borg4 mRNA, complete cds Length = 2732 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ggatttcatcctcctcctcct 522 ||||||||||||||||||||| Sbjct: 1210 ggatttcatcctcctcctcct 1190
>gb|AC122313.4| Mus musculus BAC clone RP23-300N8 from chromosome 13, complete sequence Length = 224940 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ctccagggtgaactccttct 497 |||||||||||||||||||| Sbjct: 179638 ctccagggtgaactccttct 179619
>ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokinesis 6 (LOC455723), mRNA Length = 9247 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 895 ggttgctgctgctgatgctc 876
>gb|AY439184.1| Drosophila virilis troponin I-a1 (TpnI) mRNA, partial cds, alternatively spliced Length = 632 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 560 ctcctccagtgtgaactccttctt 537
>gb|AY439183.1| Drosophila virilis troponin I-b1 (TpnI) mRNA, complete cds, alternatively spliced Length = 873 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 758 ctcctccagtgtgaactccttctt 735
>gb|AY439182.1| Drosophila subobscura troponin I-a1 (TpnI) mRNA, partial cds, alternatively spliced Length = 634 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 562 ctcctccagtgtgaactccttctt 539
>gb|AY439181.1| Drosophila subobscura troponin I-b2 (TpnI) mRNA, complete cds, alternatively spliced Length = 677 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 562 ctcctccagtgtgaactccttctt 539
>gb|AY439180.1| Drosophila subobscura troponin I-b1 (TpnI) mRNA, complete cds, alternatively spliced Length = 881 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 766 ctcctccagtgtgaactccttctt 743
>gb|BC063898.1| Xenopus tropicalis hypothetical protein MGC75586, mRNA (cDNA clone MGC:75586 IMAGE:5379179), complete cds Length = 2979 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gatttcatcctcctcctcct 522 |||||||||||||||||||| Sbjct: 958 gatttcatcctcctcctcct 939
>gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete sequence Length = 176231 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 160159 gttgctgctgctgatgctcc 160178
>ref|XM_598445.2| PREDICTED: Bos taurus similar to Chloride channel protein 6 (ClC-6), transcript variant 1 (LOC520210), mRNA Length = 2797 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 gaaggatttcatcctcctcctcct 522 ||||||| |||||||||||||||| Sbjct: 314 gaaggatctcatcctcctcctcct 291
>ref|XM_877679.1| PREDICTED: Bos taurus similar to Chloride channel protein 6 (ClC-6), transcript variant 3 (LOC520210), mRNA Length = 1111 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 gaaggatttcatcctcctcctcct 522 ||||||| |||||||||||||||| Sbjct: 314 gaaggatctcatcctcctcctcct 291
>ref|XM_877634.1| PREDICTED: Bos taurus similar to Chloride channel protein 6 (ClC-6), transcript variant 2 (LOC520210), mRNA Length = 1567 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 gaaggatttcatcctcctcctcct 522 ||||||| |||||||||||||||| Sbjct: 314 gaaggatctcatcctcctcctcct 291
>ref|XM_958031.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cggttgctgctgctgatgct 560 |||||||||||||||||||| Sbjct: 5802 cggttgctgctgctgatgct 5783
>ref|XM_328568.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cggttgctgctgctgatgct 560 |||||||||||||||||||| Sbjct: 5802 cggttgctgctgctgatgct 5783
>ref|NM_001040256.1| Apis mellifera troponin I (TpnI), mRNA Length = 767 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 |||||| ||||||||||||||||| Sbjct: 593 ctcctcgagggtgaactccttctt 570
>ref|NM_020812.1| Homo sapiens dedicator of cytokinesis 6 (DOCK6), mRNA Length = 6356 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2668 ggttgctgctgctgatgctc 2649
>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete sequence Length = 193799 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 73711 ggttgctgctgctgatgctc 73730
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 acgctgcccatcaggttacc 252 |||||||||||||||||||| Sbjct: 953967 acgctgcccatcaggttacc 953986
>gb|AC122194.4| Mus musculus BAC clone RP23-47D6 from chromosome 13, complete sequence Length = 192347 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ctccagggtgaactccttct 497 |||||||||||||||||||| Sbjct: 178302 ctccagggtgaactccttct 178283
>gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complete sequence Length = 186465 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 tcctcctcctccttgctgcttctt 533 ||||||||||||||||| |||||| Sbjct: 131715 tcctcctcctccttgctccttctt 131738
>ref|XM_978573.1| PREDICTED: Mus musculus similar to Dedicator of cytokinesis protein 6 (LOC670024), mRNA Length = 6647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2569 ggttgctgctgctgatgctc 2550
>gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complete sequence Length = 121520 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 tcctcctcctccttgctgcttctt 533 ||||||||||||||||| |||||| Sbjct: 7616 tcctcctcctccttgctccttctt 7639
>ref|XM_751710.1| Ustilago maydis 521 hypothetical protein (UM00656.1) partial mRNA Length = 1599 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 1039 gttgctgctgctgatgctcc 1020
>ref|XM_848807.1| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 6 (LOC611163), mRNA Length = 8988 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2707 ggttgctgctgctgatgctc 2688
>ref|XM_799474.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053422867.10) partial mRNA Length = 2115 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 cggttgctgctgctgatgct 560 |||||||||||||||||||| Sbjct: 2062 cggttgctgctgctgatgct 2081
>gb|AC007000.2| Homo sapiens BAC clone RP11-467H10 from 7, complete sequence Length = 196660 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttctt 533 ||||||||||||||||| |||||| Sbjct: 129748 tcctcctcctccttgctccttctt 129725
>emb|AL513205.8| Human DNA sequence from clone RP11-432E18 on chromosome 1 Contains the OR6K1P olfactory receptor, family 6, subfamily K, member 1 pseudogene, the OR6K2 gene for olfactory receptor, family 6, subfamily K, member 2, the OR6K3 gene for olfactory receptor, family 6, subfamily K, member 3, the OR6K4P olfactory receptor, family 6, subfamily K, member 4 pseudogene, the OR6K5P olfactory receptor, family 6, subfamily K, member 5 pseudogene, the OR6K6 gene for olfactory receptor, family 6, subfamily K, member 6, the OR6N1 gene for olfactory receptor, family 6, subfamily N, member 1, the OR6N2 gene for olfactory receptor, family 6, subfamily N, member 2, the OR2AQ1P olfactory receptor, family 2, subfamily AQ, member 1 pseudogene, the OR10AA1P olfactory receptor, family 10, subfamily AA, member 1 pseudogene and the MNDA gene for myeloid cell nuclear differentiation antigen, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 ctgctactgatcaactaaacatttaaca 83 ||||||||| || ||||||||||||||| Sbjct: 53310 ctgctactgttccactaaacatttaaca 53283
>emb|AL359732.12| Human DNA sequence from clone RP11-450B15 on chromosome 1 Contains the 5' end of the PSEN2 gene for presenilin 2 (Alzheimer disease 4), complete sequence Length = 93426 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgct 529 |||||||||||||||||||| Sbjct: 86636 tcctcctcctccttgctgct 86617
>emb|X58188.1|DMTROPONI D.melanogaster tn1 gene Length = 12871 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 10669 ctcctccagcgtgaactccttctt 10646
>emb|X59376.1|DMHELDUP D.melanogaster heldup gene for troponin I Length = 783 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 628 ctcctccagcgtgaactccttctt 605
>ref|NM_001031110.1| Gallus gallus similar to RIKEN cDNA 1200013B08 (LOC422138), mRNA Length = 2164 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 tctcctccagggtgaactccttct 497 ||||||||||| |||||||||||| Sbjct: 245 tctcctccaggttgaactccttct 222
>gb|BC057368.1| Mus musculus dedicator of cytokinesis 6, mRNA (cDNA clone MGC:67290 IMAGE:6832553), complete cds Length = 4208 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 416 ggttgctgctgctgatgctc 397
>emb|AJ720161.1| Gallus gallus mRNA for hypothetical protein, clone 11n1 Length = 2164 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 tctcctccagggtgaactccttct 497 ||||||||||| |||||||||||| Sbjct: 245 tctcctccaggttgaactccttct 222
>gb|DQ122902.1| Chlamydomonas incerta microtubule-associated protein-related protein mRNA, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 167 aacgtcttctcgctgctgtagcacatgtagaggaagccatcctc 210 ||||| ||||||| ||||||| |||||||||||||| ||||| Sbjct: 437 aacgtgttctcgccgctgtaggtgatgtagaggaagccgtcctc 394
>gb|AY122145.1| Drosophila melanogaster HL08042 full insert cDNA Length = 950 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 617 ctcctccagcgtgaactccttctt 594
>gb|AC091683.53| Mus musculus strain C57BL/6J clone rp23-155l11 map 13, complete sequence Length = 236314 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ctccagggtgaactccttct 497 |||||||||||||||||||| Sbjct: 53767 ctccagggtgaactccttct 53748
>tpg|BK005282.1| TPA: TPA_inf: Apis mellifera troponin H (TpnH) and troponin I (TpnI) genes, complete cds, alternatively spliced Length = 24061 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 |||||| ||||||||||||||||| Sbjct: 15238 ctcctcgagggtgaactccttctt 15215
>ref|NM_167608.1| Drosophila melanogaster wings up A CG7178-RG, transcript variant G (wupA), mRNA Length = 1355 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 863 ctcctccagcgtgaactccttctt 840
>ref|NM_167607.1| Drosophila melanogaster wings up A CG7178-RA, transcript variant A (wupA), mRNA Length = 1172 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 680 ctcctccagcgtgaactccttctt 657
>ref|NM_167606.1| Drosophila melanogaster wings up A CG7178-RB, transcript variant B (wupA), mRNA Length = 1172 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 680 ctcctccagcgtgaactccttctt 657
>ref|NM_167605.1| Drosophila melanogaster wings up A CG7178-RE, transcript variant E (wupA), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 646 ctcctccagcgtgaactccttctt 623
>ref|NM_167604.1| Drosophila melanogaster wings up A CG7178-RD, transcript variant D (wupA), mRNA Length = 1172 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 680 ctcctccagcgtgaactccttctt 657
>ref|NM_167603.1| Drosophila melanogaster wings up A CG7178-RF, transcript variant F (wupA), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 646 ctcctccagcgtgaactccttctt 623
>ref|NM_143104.1| Drosophila melanogaster Nup358 CG11856-RA (Nup358), mRNA Length = 8301 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 2864 gttgctgctgctgatgctcc 2845
>ref|NM_078674.2| Drosophila melanogaster wings up A CG7178-RC, transcript variant C (wupA), mRNA Length = 1172 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 680 ctcctccagcgtgaactccttctt 657
>gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, complete sequence Length = 161470 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttctt 533 ||||||||||||||||| |||||| Sbjct: 36252 tcctcctcctccttgctccttctt 36229
>dbj|AK145109.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830046A08 product:Dedicator of cytokinesis protein 6 homolog [Homo sapiens], full insert sequence Length = 3133 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2681 ggttgctgctgctgatgctc 2662
>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone BACR48L05, complete sequence Length = 177138 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 131789 ctcctccagcgtgaactccttctt 131766
>gb|AC162805.2| Mus musculus BAC clone RP23-109O16 from chromosome 17, complete sequence Length = 183193 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gaaggatttcatcctcctcctcct 522 |||||||||| ||||||||||||| Sbjct: 93159 gaaggatttcctcctcctcctcct 93182
>dbj|AK010755.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410095B20 product:hypothetical protein, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 999 ggttgctgctgctgatgctc 980
>tpg|BK001655.1| TPA: TPA_inf: Drosophila pseudoobscura troponin I (TpnI) gene, complete cds, alternatively spliced Length = 12917 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 11776 ctcctccagtgtgaactccttctt 11753
>emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in linkage group 7, complete sequence Length = 159633 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 taaaataatacatatggtatcttc 40 |||||||||||||||||| ||||| Sbjct: 101574 taaaataatacatatggtttcttc 101597
>gb|AC011454.6|AC011454 Homo sapiens chromosome 19 clone CTC-347E6, complete sequence Length = 163120 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tagaggaagccatcctcctt 213 |||||||||||||||||||| Sbjct: 18604 tagaggaagccatcctcctt 18623
>gb|AC011472.7|AC011472 Homo sapiens chromosome 19 clone CTC-510F12, complete sequence Length = 122321 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 30860 ggttgctgctgctgatgctc 30879
>dbj|AK048554.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130073I17 product:unclassifiable, full insert sequence Length = 2962 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gaaggatttcatcctcctcctcct 522 |||||||||| ||||||||||||| Sbjct: 986 gaaggatttcctcctcctcctcct 1009
>gb|AC156954.5| Mus musculus 6 BAC RP24-343M7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179140 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttctt 533 |||||||||||||| ||||||||| Sbjct: 123066 tcctcctcctccttcctgcttctt 123043
>ref|XM_623644.1| PREDICTED: Apis mellifera similar to ENSANGP00000020935 (LOC551040), mRNA Length = 1473 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 |||||| ||||||||||||||||| Sbjct: 641 ctcctcgagggtgaactccttctt 618
>ref|XM_623516.1| PREDICTED: Apis mellifera similar to ENSANGP00000025246 (LOC551040), mRNA Length = 1493 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 ctcctccagggtgaactccttctt 498 |||||| ||||||||||||||||| Sbjct: 661 ctcctcgagggtgaactccttctt 638
>gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, region 96C-96D, BAC clone BACR17E12, complete sequence Length = 184887 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 147586 gttgctgctgctgatgctcc 147567
>gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, region 96D-96D, BAC clone BACR06L08, complete sequence Length = 170220 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 83528 gttgctgctgctgatgctcc 83509
>gb|AF099664.1|AF099664 Homo sapiens Cdc42 effector protein 4 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gatttcatcctcctcctcct 522 |||||||||||||||||||| Sbjct: 1143 gatttcatcctcctcctcct 1124
>gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complete sequence Length = 176983 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 tttcatcctcctcctccttg 524 |||||||||||||||||||| Sbjct: 53876 tttcatcctcctcctccttg 53857
>ref|NM_203912.1| Xenopus tropicalis hypothetical protein MGC75586 (MGC75586), mRNA Length = 2979 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gatttcatcctcctcctcct 522 |||||||||||||||||||| Sbjct: 958 gatttcatcctcctcctcct 939
>gb|AC153903.5| Mus musculus 6 BAC RP23-20C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210370 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgcttctt 533 |||||||||||||| ||||||||| Sbjct: 36962 tcctcctcctccttcctgcttctt 36939
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gttgctgctgctgatgctcc 562 |||||||||||||||||||| Sbjct: 87264 gttgctgctgctgatgctcc 87245
>emb|CR848100.2| Xenopus tropicalis finished cDNA, clone TGas079d07 Length = 2517 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gatttcatcctcctcctcct 522 |||||||||||||||||||| Sbjct: 851 gatttcatcctcctcctcct 832
>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete sequence Length = 299804 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 ctcctccagggtgaactccttctt 498 ||||||||| |||||||||||||| Sbjct: 254046 ctcctccagcgtgaactccttctt 254069
>dbj|AB037816.2| Homo sapiens mRNA for KIAA1395 protein, partial cds Length = 6356 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2668 ggttgctgctgctgatgctc 2649
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tcctgccggggtacttggcg 448 |||||||||||||||||||| Sbjct: 1349490 tcctgccggggtacttggcg 1349509
>emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, complete sequence Length = 197027 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 taaaataatacatatggtatcttc 40 |||||||||||||||||| ||||| Sbjct: 120845 taaaataatacatatggtttcttc 120868
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tcctcctcctccttgctgct 529 |||||||||||||||||||| Sbjct: 59370 tcctcctcctccttgctgct 59389
>dbj|AK129348.1| Mus musculus mRNA for mKIAA1395 protein Length = 6484 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgctgctgctgatgctc 561 |||||||||||||||||||| Sbjct: 2758 ggttgctgctgctgatgctc 2739
>gb|U50871.1|HSU50871 Human familial Alzheimer's disease (STM2) gene, complete cds Length = 86640 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tcctcctcctccttgctgct 529 |||||||||||||||||||| Sbjct: 27272 tcctcctcctccttgctgct 27253
>dbj|AP002533.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 2/4 Length = 300000 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 ctgctactgatcaactaaacatttaaca 83 ||||||||| || ||||||||||||||| Sbjct: 272452 ctgctactgttccactaaacatttaaca 272425
>dbj|AB045361.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:713i11, complete sequence Length = 148081 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 ctgctactgatcaactaaacatttaaca 83 ||||||||| || ||||||||||||||| Sbjct: 19555 ctgctactgttccactaaacatttaaca 19528
>emb|AL773550.4| Mouse DNA sequence from clone RP23-433P3 on chromosome 4, complete sequence Length = 142900 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gaaggatttcatcctcctcctcct 522 |||||||||| ||||||||||||| Sbjct: 92264 gaaggatttcctcctcctcctcct 92287 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,754,166 Number of Sequences: 3902068 Number of extensions: 6754166 Number of successful extensions: 227242 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 226074 Number of HSP's gapped (non-prelim): 1168 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
