ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3i01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
2ref|XM_476058.1| Oryza sativa (japonica cultivar-group), predic... 234 3e-58
3gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 206 6e-50
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
5ref|XM_550384.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
6dbj|AK103147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
7ref|XM_450510.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
8ref|XM_506647.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 4e-08
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
10dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
11dbj|AK120204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
12dbj|AK069027.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
13gb|AY110413.1| Zea mays CL8857_1 mRNA sequence 68 4e-08
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
15dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
16dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
17gb|BT017431.1| Zea mays clone EL01N0403D07.c mRNA sequence 62 2e-06
18ref|NM_119412.3| Arabidopsis thaliana protein binding / ubiquiti... 60 9e-06
19gb|AY096655.1| Arabidopsis thaliana unknown protein (At4g32600) ... 60 9e-06
20gb|AY074271.1| Arabidopsis thaliana unknown protein (At4g32600) ... 60 9e-06
21emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 60 9e-06
22emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BA... 60 9e-06
23gb|AY081300.1| Arabidopsis thaliana putative protein (At4g32600)... 60 9e-06
24emb|BX826956.1|CNS0A39Z Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
25emb|BX828445.1|CNS0A2Y7 Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
26emb|BX829299.1|CNS0A2AN Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
27emb|BX828313.1|CNS0A2ZW Arabidopsis thaliana Full-length cDNA Co... 52 0.002
28gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, com... 46 0.14
29gb|AC132271.5| Mus musculus BAC clone RP24-338E23 from 5, comple... 46 0.14
30ref|XM_516261.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 2.1
31gb|BT013438.1| Lycopersicon esculentum clone 132079F, mRNA sequence 42 2.1
32ref|NM_004634.2| Homo sapiens bromodomain and PHD finger contain... 42 2.1
33ref|NM_001003694.1| Homo sapiens bromodomain and PHD finger cont... 42 2.1
34gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 42 2.1
35gb|AC132337.3| Mus musculus BAC clone RP24-153D21 from chromosom... 42 2.1
36gb|AC124761.4| Mus musculus BAC clone RP23-142G18 from 6, comple... 42 2.1
37gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complet... 42 2.1
38gb|BC068262.1| Homo sapiens cDNA clone IMAGE:5272879, containing... 42 2.1
39emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on ... 42 2.1
40emb|AL096762.5|HSDJ843G2 Human DNA sequence from clone RP5-843G2... 42 2.1
41emb|AL713696.1|HSM803056 Homo sapiens mRNA; cDNA DKFZp547C058 (f... 42 2.1
42gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosom... 42 2.1
43dbj|AK153819.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.1
44dbj|AK035452.1| Mus musculus adult male urinary bladder cDNA, RI... 42 2.1
45dbj|AK034716.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.1
46emb|BX934474.1| Gallus gallus finished cDNA, clone ChEST964c13 42 2.1
47emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on ch... 42 2.1
48gb|AF176815.1|AF176815 Homo sapiens putative 8-hydroxyguanine DN... 42 2.1
49gb|BC053851.1| Homo sapiens bromodomain and PHD finger containin... 42 2.1
50gb|BC036374.1| Homo sapiens cDNA clone IMAGE:4821313, containing... 42 2.1
51gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p... 42 2.1
52gb|M91585.1|HUMPRGRN Human Br140 mRNA, complete cds 42 2.1
53ref|NM_124962.1| Arabidopsis thaliana unknown protein AT5G55800 ... 40 8.4
54ref|NM_126963.2| Arabidopsis thaliana protein binding / zinc ion... 40 8.4
55gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 8.4
56ref|XM_715763.1| Candida albicans SC5314 putative mitochondrial ... 40 8.4
57gb|BC070550.1| Xenopus laevis CRM1/XPO1 protein, mRNA (cDNA clon... 40 8.4
58gb|BC038483.1| Mus musculus A kinase (PRKA) anchor protein 10, m... 40 8.4
59gb|BC054105.1| Mus musculus A kinase (PRKA) anchor protein 10, m... 40 8.4
60emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 40 8.4
61gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, compl... 40 8.4
62emb|BX664612.15| Zebrafish DNA sequence from clone DKEYP-78B3 in... 40 8.4
63emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14... 40 8.4
64gb|AY247816.1| Arabidopsis thaliana hypothetical protein (At2g13... 40 8.4
65ref|XM_883717.1| Candida albicans SC5314 hypothetical protein (C... 40 8.4
66ref|XM_716276.1| Candida albicans SC5314 mitochondrial Complex I... 40 8.4
67gb|AC007090.3| Homo sapiens PAC clone RP4-701O19 from 7, complet... 40 8.4
68ref|XM_672813.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.4
69gb|AC145166.2| Homo sapiens chromosome 17, clone XXfos-82794E5, ... 40 8.4
70emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in... 40 8.4
71emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chr... 40 8.4
72emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on ch... 40 8.4
73emb|AL731788.8| Zebrafish DNA sequence from clone RP71-1G13 in l... 40 8.4
74emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in... 40 8.4
75emb|BX927073.7| Zebrafish DNA sequence from clone DKEYP-78C2 in ... 40 8.4
76emb|BX640453.23| Zebrafish DNA sequence from clone DKEY-9L5 in l... 40 8.4
77emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in ... 40 8.4
78emb|AL646042.14| Mouse DNA sequence from clone RP23-70A15 on chr... 40 8.4
79emb|BX927207.8| Zebrafish DNA sequence from clone DKEY-72K22 in ... 40 8.4
80emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in... 40 8.4
81emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in l... 40 8.4
82gb|AC006528.5| Arabidopsis thaliana chromosome 2 clone F9B22 map... 40 8.4
83gb|AC006218.4| Arabidopsis thaliana chromosome 2 clone F17L24 ma... 40 8.4
84emb|BX005223.19| Zebrafish DNA sequence from clone DKEY-53K12, c... 40 8.4
85dbj|AK049399.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 8.4
86gb|BC026451.1| Mus musculus A kinase (PRKA) anchor protein 10, m... 40 8.4
87gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 8.4
88gb|AC021171.6| Homo sapiens BAC clone RP11-674I16 from 2, comple... 40 8.4
89gb|AC138761.4| Homo sapiens chromosome 17, clone RP11-1109M24, c... 40 8.4
90ref|XM_573108.1| PREDICTED: Rattus norvegicus A kinase (PRKA) an... 40 8.4
91gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete... 40 8.4
92dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 8.4
93emb|BX088703.5| Zebrafish DNA sequence from clone CH211-241D14 i... 40 8.4
94emb|BX004770.12| Zebrafish DNA sequence from clone DKEY-14K21 in... 40 8.4
95emb|BX088587.6| Zebrafish DNA sequence from clone DKEY-71B9 in l... 40 8.4
96dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.4
97gb|AY924740.1| Arabidopsis thaliana hypothetical protein (At2g13... 40 8.4
98emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in ... 40 8.4
99gb|AF021833.1|AF021833 Mus musculus protein kinase A anchoring p... 40 8.4
100emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-8... 40 8.4
101emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in l... 40 8.4
102ref|NM_019921.2| Mus musculus A kinase (PRKA) anchor protein 10 ... 40 8.4
103dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 8.4
104emb|AL929131.5| Zebrafish DNA sequence from clone CH211-286O17, ... 40 8.4
105emb|AL355837.6|CNS05TCR Human chromosome 14 DNA sequence BAC C-2... 40 8.4 
>dbj|AK071804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110J02, full
            insert sequence
          Length = 1869

 Score =  238 bits (120), Expect = 2e-59
 Identities = 245/284 (86%), Gaps = 2/284 (0%)
 Strand = Plus / Minus

                                                                        
Query: 332  agagttacagctgcgattcgatgtcatttcctaccctgttgtcactgtggcgacgcccaa 391
            ||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1688 agagttatagttgtgattcaatgtcgtttcctaccctgttgtcgctgtggcgacgcccaa 1629

                                                                        
Query: 392  agccaatggctggagcagttgtagggccactgtctatttcagctttgcagagggggcaca 451
            ||||||||||||||||| |||| | | |||  ||||| ||||| ||||| ||||||||||
Sbjct: 1628 agccaatggctggagcacttgtggagacaccatctatctcagccttgcaaagggggcaca 1569

                                                                        
Query: 452  gcgcgtttatcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||||||| || || || |||||||||||||| |  ||||| |
Sbjct: 1568 gcgcgtttatcttgagccatttgtccacacaatccttgtggaagaagtgcgcacaaggga 1509

                                                                        
Query: 512  gctctcggagatcatcattgttcga-gtatcttgctaggcagatacagcaaacagcatct 570
            |||||||||||||||| ||  ||||  ||||| || | |||||| ||||| |||||||||
Sbjct: 1508 gctctcggagatcatcgtt-atcgacatatctggccaagcagatgcagcagacagcatct 1450

                                                        
Query: 571  tcagcagaaacaatccgctccttgtttgttccagcagcaacaac 614
            || |||||||  |  ||||||||||||||||||||||| |||||
Sbjct: 1449 tctgcagaaatgactcgctccttgtttgttccagcagccacaac 1406
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>ref|XM_476058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score =  234 bits (118), Expect = 3e-58
 Identities = 234/270 (86%), Gaps = 2/270 (0%)
 Strand = Plus / Minus

                                                                        
Query: 346  gattcgatgtcatttcctaccctgttgtcactgtggcgacgcccaaagccaatggctgga 405
            ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1214 gattcaatgtcgtttcctaccctgttgtcgctgtggcgacgcccaaagccaatggctgga 1155

                                                                        
Query: 406  gcagttgtagggccactgtctatttcagctttgcagagggggcacagcgcgtttatcttg 465
            ||| |||| | | |||  ||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1154 gcacttgtggagacaccatctatctcagccttgcaaagggggcacagcgcgtttatcttg 1095

                                                                        
Query: 466  agccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctcggagatca 525
            ||||||||||| || || || |||||||||||||| |  ||||| |||||||||||||||
Sbjct: 1094 agccatttgtccacacaatccttgtggaagaagtgcgcacaagggagctctcggagatca 1035

                                                                        
Query: 526  tcattgttcga-gtatcttgctaggcagatacagcaaacagcatcttcagcagaaacaat 584
            || ||  ||||  ||||| || | |||||| ||||| ||||||||||| |||||||  | 
Sbjct: 1034 tcgtt-atcgacatatctggccaagcagatgcagcagacagcatcttctgcagaaatgac 976

                                          
Query: 585  ccgctccttgtttgttccagcagcaacaac 614
             ||||||||||||||||||||||| |||||
Sbjct: 975  tcgctccttgtttgttccagcagccacaac 946
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score =  206 bits (104), Expect = 6e-50
 Identities = 173/196 (88%)
 Strand = Plus / Minus

                                                                         
Query: 332   agagttacagctgcgattcgatgtcatttcctaccctgttgtcactgtggcgacgcccaa 391
             ||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 25490 agagttatagttgtgattcaatgtcgtttcctaccctgttgtcgctgtggcgacgcccaa 25431

                                                                         
Query: 392   agccaatggctggagcagttgtagggccactgtctatttcagctttgcagagggggcaca 451
             ||||||||||||||||| |||| | | |||  ||||| ||||| ||||| ||||||||||
Sbjct: 25430 agccaatggctggagcacttgtggagacaccatctatctcagccttgcaaagggggcaca 25371

                                                                         
Query: 452   gcgcgtttatcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaa 511
             ||||||||||||||||||||||||| || || || |||||||||||||| |  ||||| |
Sbjct: 25370 gcgcgtttatcttgagccatttgtccacacaatccttgtggaagaagtgcgcacaaggga 25311

                             
Query: 512   gctctcggagatcatc 527
             ||||||||||||||||
Sbjct: 25310 gctctcggagatcatc 25295



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 562   acagcatcttcagcagaaacaatccgctccttgtttgttccagcagcaacaac 614
             ||||||||||| |||||||  |  ||||||||||||||||||||||| |||||
Sbjct: 25158 acagcatcttctgcagaaatgactcgctccttgtttgttccagcagccacaac 25106
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  206 bits (104), Expect = 6e-50
 Identities = 173/196 (88%)
 Strand = Plus / Minus

                                                                           
Query: 332     agagttacagctgcgattcgatgtcatttcctaccctgttgtcactgtggcgacgcccaa 391
               ||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 4656147 agagttatagttgtgattcaatgtcgtttcctaccctgttgtcgctgtggcgacgcccaa 4656088

                                                                           
Query: 392     agccaatggctggagcagttgtagggccactgtctatttcagctttgcagagggggcaca 451
               ||||||||||||||||| |||| | | |||  ||||| ||||| ||||| ||||||||||
Sbjct: 4656087 agccaatggctggagcacttgtggagacaccatctatctcagccttgcaaagggggcaca 4656028

                                                                           
Query: 452     gcgcgtttatcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaa 511
               ||||||||||||||||||||||||| || || || |||||||||||||| |  ||||| |
Sbjct: 4656027 gcgcgtttatcttgagccatttgtccacacaatccttgtggaagaagtgcgcacaaggga 4655968

                               
Query: 512     gctctcggagatcatc 527
               ||||||||||||||||
Sbjct: 4655967 gctctcggagatcatc 4655952



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 562     acagcatcttcagcagaaacaatccgctccttgtttgttccagcagcaacaac 614
               ||||||||||| |||||||  |  ||||||||||||||||||||||| |||||
Sbjct: 4655815 acagcatcttctgcagaaatgactcgctccttgtttgttccagcagccacaac 4655763
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>ref|XM_550384.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2107

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Minus

                                                                        
Query: 430  tcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttg 489
            ||||| ||||| || |||||||| |||||||||||||||||||| || ||||||||   |
Sbjct: 1447 tcagccttgcaaagagggcacagtgcgtttatcttgagccatttatcgacgcattccaag 1388

                                                                        
Query: 490  tggaagaagtgggtgcaaggaagctctcggagatcatcattgttcgagtatcttgctagg 549
            ||||| |  ||  |||| |||||||| || ||||| || ||||| ||| |  |||  | |
Sbjct: 1387 tggaaaacatgattgcagggaagctcccgtagatcttcgttgtttgagaactttgacaag 1328

                                                                    
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatccgctccttgtttgttccagc 605
            ||||| ||||| ||||| ||||| ||||||| | | ||||| |||| |||||||||
Sbjct: 1327 cagatgcagcatacagcgtcttctgcagaaatagttcgctctttgtctgttccagc 1272
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>dbj|AK103147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120I17, full
            insert sequence
          Length = 2106

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Minus

                                                                        
Query: 430  tcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttg 489
            ||||| ||||| || |||||||| |||||||||||||||||||| || ||||||||   |
Sbjct: 1447 tcagccttgcaaagagggcacagtgcgtttatcttgagccatttatcgacgcattccaag 1388

                                                                        
Query: 490  tggaagaagtgggtgcaaggaagctctcggagatcatcattgttcgagtatcttgctagg 549
            ||||| |  ||  |||| |||||||| || ||||| || ||||| ||| |  |||  | |
Sbjct: 1387 tggaaaacatgattgcagggaagctcccgtagatcttcgttgtttgagaactttgacaag 1328

                                                                    
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatccgctccttgtttgttccagc 605
            ||||| ||||| ||||| ||||| ||||||| | | ||||| |||| |||||||||
Sbjct: 1327 cagatgcagcatacagcgtcttctgcagaaatagttcgctctttgtctgttccagc 1272
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>ref|XM_450510.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1844

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 436  ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
            |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 1474 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 1415

                                              
Query: 496  aagtgggtgcaaggaagctctcggagatcatcat 529
            |||||||||||||||||||| ||||| |||||||
Sbjct: 1414 aagtgggtgcaaggaagctcacggagctcatcat 1381



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatcc 586
            ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1360 cagatgcagcacacagcatcttcagctgaaacaatcc 1324
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>ref|XM_506647.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0024J13.14
            mRNA
          Length = 2001

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 436  ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
            |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 1537 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 1478

                                              
Query: 496  aagtgggtgcaaggaagctctcggagatcatcat 529
            |||||||||||||||||||| ||||| |||||||
Sbjct: 1477 aagtgggtgcaaggaagctcacggagctcatcat 1444



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatcc 586
            ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1423 cagatgcagcacacagcatcttcagctgaaacaatcc 1387
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                           
Query: 436     ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
               |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 9392615 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 9392674

                                                 
Query: 496     aagtgggtgcaaggaagctctcggagatcatcat 529
               |||||||||||||||||||| ||||| |||||||
Sbjct: 9392675 aagtgggtgcaaggaagctcacggagctcatcat 9392708



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 562     acagcatcttcagcagaaacaatcc 586
               |||||||||||||| ||||||||||
Sbjct: 9393411 acagcatcttcagctgaaacaatcc 9393435
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>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0024J13
          Length = 127614

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                         
Query: 436   ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
             |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 76029 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 76088

                                               
Query: 496   aagtgggtgcaaggaagctctcggagatcatcat 529
             |||||||||||||||||||| ||||| |||||||
Sbjct: 76089 aagtgggtgcaaggaagctcacggagctcatcat 76122



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 562   acagcatcttcagcagaaacaatcc 586
             |||||||||||||| ||||||||||
Sbjct: 76825 acagcatcttcagctgaaacaatcc 76849
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>dbj|AK120204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037N18, full
            insert sequence
          Length = 1844

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 436  ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
            |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 1474 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 1415

                                              
Query: 496  aagtgggtgcaaggaagctctcggagatcatcat 529
            |||||||||||||||||||| ||||| |||||||
Sbjct: 1414 aagtgggtgcaaggaagctcacggagctcatcat 1381



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatcc 586
            ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1360 cagatgcagcacacagcatcttcagctgaaacaatcc 1324
to top
>dbj|AK069027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003A15, full
            insert sequence
          Length = 2001

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 436  ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaag 495
            |||||||| |||||||  || ||||||||||||||||| || || ||||     || |||
Sbjct: 1537 ttgcagagtgggcacactgcatttatcttgagccatttatcgacacattgcacatgaaag 1478

                                              
Query: 496  aagtgggtgcaaggaagctctcggagatcatcat 529
            |||||||||||||||||||| ||||| |||||||
Sbjct: 1477 aagtgggtgcaaggaagctcacggagctcatcat 1444



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 550  cagatacagcaaacagcatcttcagcagaaacaatcc 586
            ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1423 cagatgcagcacacagcatcttcagctgaaacaatcc 1387
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>gb|AY110413.1| Zea mays CL8857_1 mRNA sequence
          Length = 675

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                       
Query: 425 ctatttcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcatt 484
           |||| |||| |||||| || ||||| || || ||||||||||||||||| || || || |
Sbjct: 299 ctatctcagatttgcacagagggcaaagtgcatttatcttgagccatttatcaacacagt 358

                                                                       
Query: 485 ctttgtggaagaagtgggtgcaaggaagctctcggagatcatcattgttcgagtatcttg 544
           | ||||||||  |||| |  || ||||| || ||||| |||||||||| ||  ||| |||
Sbjct: 359 ccttgtggaaacagtgtgcacatggaagttcacggagctcatcattgtgcgcatattttg 418

                                             
Query: 545 ctaggcagatacagcaaacagcatcttcagcaga 578
           | || ||||| |||||||| || |||||||||||
Sbjct: 419 caagacagatgcagcaaactgcgtcttcagcaga 452
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                       
Query: 430     tcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattc 485
               ||||| ||||| || |||||||| |||||||||||||||||||| || ||||||||
Sbjct: 4093154 tcagccttgcaaagagggcacagtgcgtttatcttgagccatttatcgacgcattc 4093099
to top
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 430   tcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattc 485
             ||||| ||||| || |||||||| |||||||||||||||||||| || ||||||||
Sbjct: 59897 tcagccttgcaaagagggcacagtgcgtttatcttgagccatttatcgacgcattc 59842
to top
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 430   tcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattc 485
             ||||| ||||| || |||||||| |||||||||||||||||||| || ||||||||
Sbjct: 40125 tcagccttgcaaagagggcacagtgcgtttatcttgagccatttatcgacgcattc 40070
to top
>gb|BT017431.1| Zea mays clone EL01N0403D07.c mRNA sequence
          Length = 1181

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 435 tttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtggaa 494
           ||||||||| ||||||| ||| |||||||| |||||||| ||||| ||||     || ||
Sbjct: 979 tttgcagagtgggcacaccgcatttatcttaagccatttatctacacattgaacatgaaa 920

                                              
Query: 495 gaagtgggtgcaaggaagctctcggagatcatcat 529
           |||||| |||||||||||||| || || |||||||
Sbjct: 919 gaagtgtgtgcaaggaagctcacgaagctcatcat 885
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>ref|NM_119412.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT4G32600 mRNA, complete cds
          Length = 1989

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1452 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1395
to top
>gb|AY096655.1| Arabidopsis thaliana unknown protein (At4g32600) mRNA, complete cds
          Length = 1393

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1187 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1130
to top
>gb|AY074271.1| Arabidopsis thaliana unknown protein (At4g32600) mRNA, complete cds
          Length = 1955

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1459 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1402
to top
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 460    atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
              ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 139573 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 139516
to top
>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project)
          Length = 101715

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 460   atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
             ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 91498 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 91555
to top
>gb|AY081300.1| Arabidopsis thaliana putative protein (At4g32600) mRNA, complete cds
          Length = 1928

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1393 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1336
to top
>emb|BX826956.1|CNS0A39Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB7ZF08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1802

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1428 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1371
to top
>emb|BX828445.1|CNS0A2Y7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH8ZG11 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1861

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 1338 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 1281
to top
>emb|BX829299.1|CNS0A2AN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL8ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 779

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 460 atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
           ||||| ||||||||||| ||||| |||||||||||||| || | ||| ||||||||||
Sbjct: 298 atcttcagccatttgtcaacgcactctttgtggaagaaatgtgagcatggaagctctc 241
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>emb|BX828313.1|CNS0A2ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH75ZH01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1865

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 460  atcttgagccatttgtctacgcattctttgtggaagaagtgggtgcaaggaagctctc 517
            ||||| ||||||||||| ||||| |||||||||||||  || | ||| ||||||||||
Sbjct: 1376 atcttcagccatttgtcaacgcactctttgtggaagagatgtgagcatggaagctctc 1319
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>gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, complete sequence
          Length = 215166

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 106   caacactaaccaacaaaggtaaccacc 132
             ||||||||| |||||||||||||||||
Sbjct: 80975 caacactaatcaacaaaggtaaccacc 80949
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>gb|AC132271.5| Mus musculus BAC clone RP24-338E23 from 5, complete sequence
          Length = 173029

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 104    accaacactaaccaacaaaggta 126
              |||||||||||||||||||||||
Sbjct: 143835 accaacactaaccaacaaaggta 143857
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>ref|XM_516261.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC460151), mRNA
          Length = 3756

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1245 gcagatacagcaaacagcatc 1225
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>gb|BT013438.1| Lycopersicon esculentum clone 132079F, mRNA sequence
          Length = 1929

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 427  atttcagctttgcagagggggcacagcgcgtttatcttgagccatttgtctac 479
            ||||||| |||||||||||||||   ||| || ||||| |||||||| |||||
Sbjct: 1302 atttcagatttgcagagggggcaagtcgcattaatcttcagccatttatctac 1250
to top
>ref|NM_004634.2| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1),
            transcript variant 2, mRNA
          Length = 4710

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1236 gcagatacagcaaacagcatc 1216
to top
>ref|NM_001003694.1| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1),
            transcript variant 1, mRNA
          Length = 4728

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1236 gcagatacagcaaacagcatc 1216
to top
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 355    tcatttcctaccctgttgtcactgt 379
              |||||||||||||||| ||||||||
Sbjct: 174974 tcatttcctaccctgtggtcactgt 174950
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>gb|AC132337.3| Mus musculus BAC clone RP24-153D21 from chromosome 6, complete sequence
          Length = 146358

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     acaacagaaaaataaatggct 63
              |||||||||||||||||||||
Sbjct: 142489 acaacagaaaaataaatggct 142469
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>gb|AC124761.4| Mus musculus BAC clone RP23-142G18 from 6, complete sequence
          Length = 182921

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    acaacagaaaaataaatggct 63
             |||||||||||||||||||||
Sbjct: 36341 acaacagaaaaataaatggct 36321
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>gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complete sequence
          Length = 163985

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 355   tcatttcctaccctgttgtcactgt 379
             |||||||||||||||| ||||||||
Sbjct: 31445 tcatttcctaccctgtggtcactgt 31421
to top
>gb|BC068262.1| Homo sapiens cDNA clone IMAGE:5272879, containing frame-shift errors
          Length = 4719

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1241 gcagatacagcaaacagcatc 1221
to top
>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4
              Contains part of a novel gene, complete sequence
          Length = 166715

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 318    tcaatgcataatgcagagtta 338
              |||||||||||||||||||||
Sbjct: 166681 tcaatgcataatgcagagtta 166701
to top
>emb|AL096762.5|HSDJ843G2 Human DNA sequence from clone RP5-843G2 on chromosome Xp11.3-11.4
             Contains part of a novel gene and a CpG island, complete
             sequence
          Length = 14601

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   tcaatgcataatgcagagtta 338
             |||||||||||||||||||||
Sbjct: 14536 tcaatgcataatgcagagtta 14516
to top
>emb|AL713696.1|HSM803056 Homo sapiens mRNA; cDNA DKFZp547C058 (from clone DKFZp547C058)
          Length = 4539

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1066 gcagatacagcaaacagcatc 1046
to top
>gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosome 9, complete sequence
          Length = 187558

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     taaccatctctagacaacctg 86
              |||||||||||||||||||||
Sbjct: 156208 taaccatctctagacaacctg 156188
to top
>dbj|AK153819.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:C920005A13
            product:phosphatidylinositol glycan, class B, full insert
            sequence
          Length = 3143

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   taaccatctctagacaacctg 86
            |||||||||||||||||||||
Sbjct: 2752 taaccatctctagacaacctg 2772
to top
>dbj|AK035452.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530050K08
           product:unclassifiable, full insert sequence
          Length = 3066

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  taaccatctctagacaacctg 86
           |||||||||||||||||||||
Sbjct: 697 taaccatctctagacaacctg 717
to top
>dbj|AK034716.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430028F23 product:hypothetical protein, full
            insert sequence
          Length = 2867

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   taaccatctctagacaacctg 86
            |||||||||||||||||||||
Sbjct: 1559 taaccatctctagacaacctg 1579
to top
>emb|BX934474.1| Gallus gallus finished cDNA, clone ChEST964c13
          Length = 832

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 551 agatacagcaaacagcatctt 571
           |||||||||||||||||||||
Sbjct: 454 agatacagcaaacagcatctt 434
to top
>emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on chromosome 2, complete
              sequence
          Length = 194013

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 560    aaacagcatcttcagcagaaacaat 584
              ||||||| |||||||||||||||||
Sbjct: 133100 aaacagcgtcttcagcagaaacaat 133124
to top
>gb|AF176815.1|AF176815 Homo sapiens putative 8-hydroxyguanine DNA glycosylase gene, complete
             cds
          Length = 51803

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 549   gcagatacagcaaacagcatc 569
             |||||||||||||||||||||
Sbjct: 31379 gcagatacagcaaacagcatc 31359
to top
>gb|BC053851.1| Homo sapiens bromodomain and PHD finger containing, 1, transcript
            variant 1, mRNA (cDNA clone MGC:61492 IMAGE:6140996),
            complete cds
          Length = 4599

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1230 gcagatacagcaaacagcatc 1210
to top
>gb|BC036374.1| Homo sapiens cDNA clone IMAGE:4821313, containing frame-shift errors
          Length = 4589

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  gcagatacagcaaacagcatc 569
            |||||||||||||||||||||
Sbjct: 1242 gcagatacagcaaacagcatc 1222
to top
>gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p, complete sequence
          Length = 185067

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 549   gcagatacagcaaacagcatc 569
             |||||||||||||||||||||
Sbjct: 96294 gcagatacagcaaacagcatc 96314
to top
>gb|M91585.1|HUMPRGRN Human Br140 mRNA, complete cds
          Length = 4320

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 549 gcagatacagcaaacagcatc 569
           |||||||||||||||||||||
Sbjct: 865 gcagatacagcaaacagcatc 845
to top
>ref|NM_124962.1| Arabidopsis thaliana unknown protein AT5G55800 mRNA, complete cds
          Length = 1737

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctacgcattctttgtggaa 494
           ||||||||||||||||||||
Sbjct: 356 tctacgcattctttgtggaa 337
to top
>ref|NM_126963.2| Arabidopsis thaliana protein binding / zinc ion binding AT2G13900
           mRNA, complete cds
          Length = 2166

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctacgcattctttgtggaa 494
           ||||||||||||||||||||
Sbjct: 576 tctacgcattctttgtggaa 557
to top
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    cattttgcaccctcaatgca 325
              ||||||||||||||||||||
Sbjct: 994547 cattttgcaccctcaatgca 994528
to top
>ref|XM_715763.1| Candida albicans SC5314 putative mitochondrial complex I 49kd
           subunit (CaO19_13884), mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 564 agcatcttcagcagaaacaa 583
           ||||||||||||||||||||
Sbjct: 894 agcatcttcagcagaaacaa 875
to top
>gb|BC070550.1| Xenopus laevis CRM1/XPO1 protein, mRNA (cDNA clone MGC:79902
            IMAGE:6635969), complete cds
          Length = 4605

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  actttataatttacaaattg 282
            ||||||||||||||||||||
Sbjct: 3824 actttataatttacaaattg 3805
to top
>gb|BC038483.1| Mus musculus A kinase (PRKA) anchor protein 10, mRNA (cDNA clone
            IMAGE:3486664), partial cds
          Length = 2580

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 1096 gaagaagtgggtgcaaggaa 1115
to top
>gb|BC054105.1| Mus musculus A kinase (PRKA) anchor protein 10, mRNA (cDNA clone
            MGC:60489 IMAGE:30022728), complete cds
          Length = 2836

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 1341 gaagaagtgggtgcaaggaa 1360
to top
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7,
            complete sequence
          Length = 196531

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 561  aacagcatcttcagcagaaa 580
            ||||||||||||||||||||
Sbjct: 2408 aacagcatcttcagcagaaa 2427
to top
>gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, complete sequence
          Length = 159409

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  acctgaattaccatcttcag 177
            ||||||||||||||||||||
Sbjct: 8908 acctgaattaccatcttcag 8889
to top
>emb|BX664612.15| Zebrafish DNA sequence from clone DKEYP-78B3 in linkage group 7, complete
              sequence
          Length = 186965

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aacagcatcttcagcagaaa 580
              ||||||||||||||||||||
Sbjct: 172791 aacagcatcttcagcagaaa 172772
to top
>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3,
             complete sequence
          Length = 96467

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 436   ttgcagagggggcacagcgcgtttatcttgagccatttgtctacgcattctttgtg 491
             ||||| |||||||| |  || |||||||| | ||| ||||||||||| ||||||||
Sbjct: 94019 ttgcaaagggggcataatgcatttatcttcaaccacttgtctacgcactctttgtg 94074
to top
>gb|AY247816.1| Arabidopsis thaliana hypothetical protein (At2g13900/F17L24.4)
           mRNA, complete cds
          Length = 2190

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctacgcattctttgtggaa 494
           ||||||||||||||||||||
Sbjct: 576 tctacgcattctttgtggaa 557
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>ref|XM_883717.1| Candida albicans SC5314 hypothetical protein (CaJ7.0217) partial
           mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 564 agcatcttcagcagaaacaa 583
           ||||||||||||||||||||
Sbjct: 894 agcatcttcagcagaaacaa 875
to top
>ref|XM_716276.1| Candida albicans SC5314 mitochondrial Complex I, NUCM_49kd subunit
           (CaO19.6531) partial mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 564 agcatcttcagcagaaacaa 583
           ||||||||||||||||||||
Sbjct: 894 agcatcttcagcagaaacaa 875
to top
>gb|AC007090.3| Homo sapiens PAC clone RP4-701O19 from 7, complete sequence
          Length = 68229

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   acctgaattaccatcttcag 177
             ||||||||||||||||||||
Sbjct: 23260 acctgaattaccatcttcag 23279
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>ref|XM_672813.1| Plasmodium berghei strain ANKA hypothetical protein (PB103145.00.0)
            partial mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   tagacaacagaaaaataaat 59
            ||||||||||||||||||||
Sbjct: 1350 tagacaacagaaaaataaat 1369
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>gb|AC145166.2| Homo sapiens chromosome 17, clone XXfos-82794E5, complete sequence
          Length = 37498

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 485  ctttgtggaagaagtgggtg 504
            ||||||||||||||||||||
Sbjct: 8710 ctttgtggaagaagtgggtg 8691
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>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1,
             complete sequence
          Length = 212798

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 561   aacagcatcttcagcagaaacaat 584
             |||||||||| |||||||||||||
Sbjct: 15813 aacagcatctccagcagaaacaat 15790
to top
>emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chromosome 13, complete
             sequence
          Length = 167477

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   ctttgtggaagaagtgggtg 504
             ||||||||||||||||||||
Sbjct: 86532 ctttgtggaagaagtgggtg 86513
to top
>emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on chromosome 1, complete
             sequence
          Length = 174739

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   caataacctgaattaccatcttca 176
             ||||||||||||| ||||||||||
Sbjct: 67291 caataacctgaatgaccatcttca 67268
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>emb|AL731788.8| Zebrafish DNA sequence from clone RP71-1G13 in linkage group 12 Contains
              part of a novel gene, a novel gene similar to PTEN
              (phosphatase and tensin homolog), a novel LINE element with
              a potentially active ORF1 and four CpG islands, complete
              sequence
          Length = 165909

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    aacagcatcttcagcagaaacaat 584
              ||||| ||||||||||||||||||
Sbjct: 115493 aacagtatcttcagcagaaacaat 115470
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>emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in linkage group 17,
             complete sequence
          Length = 154824

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 45023 aacagcatcttcagcagaaa 45042
to top
>emb|BX927073.7| Zebrafish DNA sequence from clone DKEYP-78C2 in linkage group 23,
             complete sequence
          Length = 85724

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 48542 aacagcatcttcagcagaaa 48561
to top
>emb|BX640453.23| Zebrafish DNA sequence from clone DKEY-9L5 in linkage group 12, complete
              sequence
          Length = 223071

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 561    aacagcatcttcagcagaaacaat 584
              ||||| ||||||||||||||||||
Sbjct: 192589 aacagtatcttcagcagaaacaat 192612
to top
>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10,
             complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 53237 aacagcatcttcagcagaaa 53218
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>emb|AL646042.14| Mouse DNA sequence from clone RP23-70A15 on chromosome 11 Contains the
             5' end of the Ulk2 gene for Unc-51 like kinase 2 (C.
             elegans), two novel genes (A530017D24Rik, D630015H07), the
             Akap10 gene for  A kinase (PRKA) anchor protein 10, the 5'
             end of the gene for a novel protein similar to human sperm
             antigen HCMOGT-1 (B230396K10Rik) and three CpG islands,
             complete sequence
          Length = 159693

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   gaagaagtgggtgcaaggaa 511
             ||||||||||||||||||||
Sbjct: 78059 gaagaagtgggtgcaaggaa 78040
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>emb|BX927207.8| Zebrafish DNA sequence from clone DKEY-72K22 in linkage group 5,
            complete sequence
          Length = 154143

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 257  tacttcactttataatttacaaattgca 284
            ||||||||| ||||||||||||| ||||
Sbjct: 8913 tacttcactgtataatttacaaagtgca 8886
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>emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in linkage group 8,
              complete sequence
          Length = 197947

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     cagaaaaataaatggctatt 66
              ||||||||||||||||||||
Sbjct: 184548 cagaaaaataaatggctatt 184529
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>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15,
             complete sequence
          Length = 155540

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 14327 aacagcatcttcagcagaaa 14308
to top
>gb|AC006528.5| Arabidopsis thaliana chromosome 2 clone F9B22 map mi398, complete
           sequence
          Length = 95765

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctacgcattctttgtggaa 494
           ||||||||||||||||||||
Sbjct: 516 tctacgcattctttgtggaa 497
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>gb|AC006218.4| Arabidopsis thaliana chromosome 2 clone F17L24 map GPC6, complete
             sequence
          Length = 90161

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   tctacgcattctttgtggaa 494
             ||||||||||||||||||||
Sbjct: 14016 tctacgcattctttgtggaa 14035
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>emb|BX005223.19| Zebrafish DNA sequence from clone DKEY-53K12, complete sequence
          Length = 242587

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aacagcatcttcagcagaaa 580
              ||||||||||||||||||||
Sbjct: 210734 aacagcatcttcagcagaaa 210715
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>dbj|AK049399.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430003L11 product:A kinase
            (PRKA) anchor protein 10, full insert sequence
          Length = 3848

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 2007 gaagaagtgggtgcaaggaa 2026
to top
>gb|BC026451.1| Mus musculus A kinase (PRKA) anchor protein 10, mRNA (cDNA clone
           IMAGE:4460549), with apparent retained intron
          Length = 1941

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 492 gaagaagtgggtgcaaggaa 511
           ||||||||||||||||||||
Sbjct: 453 gaagaagtgggtgcaaggaa 472
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 127    accaccaaaagctcgcggttcatg 150
              |||||||||| |||||||||||||
Sbjct: 763960 accaccaaaatctcgcggttcatg 763983
to top
>gb|AC021171.6| Homo sapiens BAC clone RP11-674I16 from 2, complete sequence
          Length = 162609

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   gattaccaacactaaccaac 119
             ||||||||||||||||||||
Sbjct: 70288 gattaccaacactaaccaac 70269
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>gb|AC138761.4| Homo sapiens chromosome 17, clone RP11-1109M24, complete sequence
          Length = 155327

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 485  ctttgtggaagaagtgggtg 504
            ||||||||||||||||||||
Sbjct: 8474 ctttgtggaagaagtgggtg 8493
to top
>ref|XM_573108.1| PREDICTED: Rattus norvegicus A kinase (PRKA) anchor protein 10
            (predicted) (Akap10_predicted), mRNA
          Length = 3812

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 2007 gaagaagtgggtgcaaggaa 2026
to top
>gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete sequence
          Length = 131250

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     cagaaaaataaatggctatt 66
              ||||||||||||||||||||
Sbjct: 110810 cagaaaaataaatggctatt 110791
to top
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 101     attaccaacactaaccaaca 120
               ||||||||||||||||||||
Sbjct: 3503430 attaccaacactaaccaaca 3503411
to top
>emb|BX088703.5| Zebrafish DNA sequence from clone CH211-241D14 in linkage group 17,
             complete sequence
          Length = 87046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 57916 aacagcatcttcagcagaaa 57935
to top
>emb|BX004770.12| Zebrafish DNA sequence from clone DKEY-14K21 in linkage group 10,
             complete sequence
          Length = 231131

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 27817 aacagcatcttcagcagaaa 27836
to top
>emb|BX088587.6| Zebrafish DNA sequence from clone DKEY-71B9 in linkage group 17,
             complete sequence
          Length = 154682

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   aacagcatcttcagcagaaa 580
             ||||||||||||||||||||
Sbjct: 38695 aacagcatcttcagcagaaa 38676
to top
>dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDF20
          Length = 86699

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   tctacgcattctttgtggaa 494
             ||||||||||||||||||||
Sbjct: 73631 tctacgcattctttgtggaa 73612
to top
>gb|AY924740.1| Arabidopsis thaliana hypothetical protein (At2g13900) gene,
           complete cds
          Length = 1986

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctacgcattctttgtggaa 494
           ||||||||||||||||||||
Sbjct: 518 tctacgcattctttgtggaa 499
to top
>emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in linkage group 7, complete
              sequence
          Length = 162939

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aacagcatcttcagcagaaa 580
              ||||||||||||||||||||
Sbjct: 154726 aacagcatcttcagcagaaa 154707
to top
>gb|AF021833.1|AF021833 Mus musculus protein kinase A anchoring protein (D-AKAP2) mRNA,
            complete cds
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 1392 gaagaagtgggtgcaaggaa 1411
to top
>emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-880O3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 225603

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   gccacatcagggacattttg 312
             ||||||||||||||||||||
Sbjct: 19547 gccacatcagggacattttg 19566
to top
>emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in linkage group 17, complete
              sequence
          Length = 193168

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aacagcatcttcagcagaaa 580
              ||||||||||||||||||||
Sbjct: 158301 aacagcatcttcagcagaaa 158282
to top
>ref|NM_019921.2| Mus musculus A kinase (PRKA) anchor protein 10 (Akap10), mRNA
          Length = 3848

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gaagaagtgggtgcaaggaa 511
            ||||||||||||||||||||
Sbjct: 2007 gaagaagtgggtgcaaggaa 2026
to top
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    agcatcttcagcagaaacaa 583
              ||||||||||||||||||||
Sbjct: 407598 agcatcttcagcagaaacaa 407579
to top
>emb|AL929131.5| Zebrafish DNA sequence from clone CH211-286O17, complete sequence
          Length = 152081

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    aacagcatcttcagcagaaa 580
              ||||||||||||||||||||
Sbjct: 141706 aacagcatcttcagcagaaa 141725
to top
>emb|AL355837.6|CNS05TCR Human chromosome 14 DNA sequence BAC C-2216L1 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 120724

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   gccacatcagggacattttg 312
             ||||||||||||||||||||
Sbjct: 43073 gccacatcagggacattttg 43054


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,718,680
Number of Sequences: 3902068
Number of extensions: 5718680
Number of successful extensions: 108573
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 108255
Number of HSP's gapped (non-prelim): 319
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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