>emb|AJ277096.1|HVU277096 Hordeum vulgare mRNA for putative kinetochore protein (skp1 gene)
          Length = 842

 Score =  236 bits (119), Expect = 1e-59
 Identities = 130/133 (97%), Gaps = 1/133 (0%)
 Strand = Plus / Minus

                                                                       
Query: 13  gttctcacaaacataaacactgaccgaagatgttcaccgacaccacctcataagactcga 72
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gttctcacaa-cataaacactgaccgaagatgttcaccgacaccacctcataagactcga 727

                                                                       
Query: 73  ggataattacaacccattacgacgacntaaagaagagcgctgaaatgcanacatgacaaa 132
           |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 726 ggataattacaacccattacgacgacataaagaagagcgctgaaatgcagacatgacaaa 667

                        
Query: 133 tactaagagttgg 145
           |||||||||||||
Sbjct: 666 tactaagagttgg 654

>emb|AJ577364.1|TAE577364 Triticum aestivum mRNA for putative SKP1 protein
          Length = 711

 Score =  165 bits (83), Expect = 4e-38
 Identities = 122/133 (91%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                       
Query: 13  gttctcacaaacataaacactgaccgaagatgttcaccgacaccacctcataagactcga 72
           |||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||| |
Sbjct: 700 gttctcgcaaacataaccactgaccgaagatgttcaccaacaccacctcat-agactcca 642

                                                                       
Query: 73  ggataattacaacccattacgac-gacntaaagaagagcgctgaaatgcanacatgacaa 131
           ||||||||||||||||||||||| ||| ||||||||||||||||||| || ||||||| |
Sbjct: 641 ggataattacaacccattacgacagacataaagaagagcgctgaaatacagacatgacga 582

                        
Query: 132 atactaagagttg 144
           |||||||| ||||
Sbjct: 581 atactaagcgttg 569

>gb|AY316293.1| Triticum aestivum SKP1/ASK1-like protein (skp1) mRNA, complete cds
          Length = 822

 Score =  159 bits (80), Expect = 3e-36
 Identities = 116/126 (92%), Gaps = 2/126 (1%)
 Strand = Plus / Minus

                                                                       
Query: 20  caaacataaacactgaccgaagatgttcaccgacaccacctcataagactcgaggataat 79
           ||||||||| ||||||||| | ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 760 caaacataaccactgaccgtacatgttcaccgacaccacctcata-gactccaggataat 702

                                                                       
Query: 80  tacaacccattacgac-gacntaaagaagagcgctgaaatgcanacatgacaaatactaa 138
           |||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||
Sbjct: 701 tacaacccattacgacagacataaagaagagcgctgaaatgcagacatgacgaatactaa 642

                 
Query: 139 gagttg 144
           | ||||
Sbjct: 641 gcgttg 636

>gb|AC025253.20|AC025253 Homo sapiens 12 BAC RP11-499A10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170691

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ctcacaaacataaacactga 35
              ||||||||||||||||||||
Sbjct: 119031 ctcacaaacataaacactga 119050

>gb|AC149154.3| Xenopus tropicalis clone ISB-241F10, complete sequence
          Length = 96260

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    aagatgttcaccgacacca 57
             |||||||||||||||||||
Sbjct: 29155 aagatgttcaccgacacca 29173

>gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome 15, complete sequence
          Length = 199419

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 111   gctgaaatgcanacatgacaaa 132
             ||||||||||| ||||||||||
Sbjct: 84639 gctgaaatgcagacatgacaaa 84660

>emb|CR384078.17| Zebrafish DNA sequence from clone DKEY-251E16 in linkage group 6,
              complete sequence
          Length = 181633

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     cacaaacataaacactgac 36
              |||||||||||||||||||
Sbjct: 120118 cacaaacataaacactgac 120100

>gb|AC125523.4| Mus musculus BAC clone RP24-376O18 from chromosome 15, complete sequence
          Length = 176341

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 111    gctgaaatgcanacatgacaaa 132
              ||||||||||| ||||||||||
Sbjct: 143819 gctgaaatgcagacatgacaaa 143840

>emb|CR706898.2|CNS0G8E6 Tetraodon nigroviridis full-length cDNA
          Length = 730

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 18  cacaaacataaacactgac 36
           |||||||||||||||||||
Sbjct: 190 cacaaacataaacactgac 172

>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24,
             complete sequence
          Length = 175626

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    ctcacaaacataaacactg 34
             |||||||||||||||||||
Sbjct: 72639 ctcacaaacataaacactg 72621

>gb|AC007665.24| Mus musculus strain RIII Fibroblast cell line C127 chromosome 18 clone
             mgsriii-p1_3084, complete sequence
          Length = 85548

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    tcacaaacataaacactga 35
             |||||||||||||||||||
Sbjct: 65591 tcacaaacataaacactga 65609

>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence
          Length = 219298

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    cacaaacataaacactgac 36
             |||||||||||||||||||
Sbjct: 80864 cacaaacataaacactgac 80882

>gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosome 16, complete
             sequence
          Length = 170875

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    cacaaacataaacactgac 36
             |||||||||||||||||||
Sbjct: 35401 cacaaacataaacactgac 35419

>dbj|D49696.1|NILIZUMOD Nilaparvata lugens reovirus genome segment S4, complete sequence
            encoding 130KD protein (complete cds)
          Length = 3560

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 17   tcacaaacataaacactga 35
            |||||||||||||||||||
Sbjct: 3122 tcacaaacataaacactga 3104

>emb|AL844533.11| Mouse DNA sequence from clone RP23-299K8 on chromosome 2, complete
             sequence
          Length = 183820

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    cacaaacataaacactgac 36
             |||||||||||||||||||
Sbjct: 14321 cacaaacataaacactgac 14303


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 738,717
Number of Sequences: 3902068
Number of extensions: 738717
Number of successful extensions: 43036
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43014
Number of HSP's gapped (non-prelim): 18
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)