>YSC84_YEAST (P32793) Protein YSC84 (LAS seventeen-binding protein 4)|
          Length = 468

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 54/131 (41%), Positives = 72/131 (54%)
 Frame = -3

Query: 666 SAILSVGLGWGVQIGGELTDFIIVLHDLKVVKAFSSRMHXXXXXXXXXXXGPIGRALEAD 487
           SAI   G G G  +G ELTDF+ +L+  + V++FS               GP+GR+ EA 
Sbjct: 83  SAIAMAGAGAGGMVGVELTDFVFILNSEEAVRSFSEFGTITLGGNVSVSAGPLGRSAEAA 142

Query: 486 VRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSDTNLRFYGDAYLTTTDILFGRVEKP 307
             AS  G    + YS SKG F GVS+EG+ +  R + N +FYGD   T+  IL GRV+ P
Sbjct: 143 ASASTGGVSAVFAYSKSKGLFAGVSVEGSAILERREANRKFYGD-NCTSKMILSGRVKVP 201

Query: 306 RAAQPLYSALD 274
            AA PL   L+
Sbjct: 202 PAADPLLRILE 212

>LSB3_YEAST (P43603) LAS seventeen-binding protein 3 (LAS17-binding protein 3)|
          Length = 451

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 53/131 (40%), Positives = 69/131 (52%)
 Frame = -3

Query: 666 SAILSVGLGWGVQIGGELTDFIIVLHDLKVVKAFSSRMHXXXXXXXXXXXGPIGRALEAD 487
           SAI   G G G  +G ELTDF+ +L+    VK+FS               GP+GR+ EA 
Sbjct: 75  SAIAMAGAGAGGMVGIELTDFVFILNTQDAVKSFSEFGTITLGGNVSVSAGPLGRSAEAA 134

Query: 486 VRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSDTNLRFYGDAYLTTTDILFGRVEKP 307
             AS  G    + YS SKG F GVS+EG+ +  R + N +FYGD   T   IL GR+  P
Sbjct: 135 ASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRKFYGD-NCTAKMILSGRIRPP 193

Query: 306 RAAQPLYSALD 274
            A  PL+  L+
Sbjct: 194 PAVDPLFRVLE 204

>ACR2_NEUCR (P78704) Acriflavine sensitivity control protein acr-2|
          Length = 595

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = -1

Query: 575 SRHSAAACIFLLGQD*VRQQARLAEPLKQMFEQVKKVLGYATLTAAAKVHLLGSLW 408
           S H AAAC+F+L    V +   L  PL +  + V+++LG+ +      VHL G++W
Sbjct: 463 SAHRAAACLFVLLS--VPETGLLEIPLLEPKDLVQEILGHLSCIPDNHVHLKGTVW 516

>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat|
            protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182
            autoantigen) (GW1 protein) (EMSY interactor protein)
          Length = 1962

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 27/87 (31%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
 Frame = -1

Query: 419  GSLWKEMW*QPDRTPICASMGTPT*PRPISCLGGWRSPELRNPCTQLWMIYSQKWFASSS 240
            GS W E W +P         GT    +PI     W  P      T  W   S    A S 
Sbjct: 1057 GSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSK 1116

Query: 239  HGSLSIQ--WCTYISLKYGRNPT-WEK 168
             G  S+Q  WC       G  PT WE+
Sbjct: 1117 SGPKSMQDGWCGDDMPLPGNRPTGWEE 1143

>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)|
          Length = 364

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = -1

Query: 452 TLTAAAKVHLLGSLWKEMW*QPDRTPICASMGTPT*PRPISCLGGWRSPELRNPC 288
           TLT  +++ L+GS   ++     +TP+ A +  PT   P S LG W   EL +PC
Sbjct: 102 TLTPVSRL-LIGSQSSQL----AQTPLAAMVLDPTIVSPFSELGAWFQHELPDPC 151

>ARSA_CHLVI (Q46465) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 405

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +2

Query: 464 EPFSLARTSASRALPIGPAAALNPAPRERCMRLLNALTTLRS*STIIKSVNS---PPICT 634
           E FSL R    ++  +  A  L+ AP    +RLL+   TL      +K+VN     P+  
Sbjct: 109 ELFSLLRIKRYKSTGLYDALVLDTAPTGETLRLLSLPDTLSWGMKAVKNVNKYIVRPLSK 168

Query: 635 PHPNPTDKIA 664
           P    +DKIA
Sbjct: 169 PLSKMSDKIA 178

>ARSA_CHLTE (Q46366) Putative arsenical pump-driving ATPase (EC 3.6.3.16)|
           (Arsenite-translocating ATPase) (Arsenical resistance
           ATPase) (Arsenite-transporting ATPase)
          Length = 405

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +2

Query: 464 EPFSLARTSASRALPIGPAAALNPAPRERCMRLLNALTTLRS*STIIKSVNS---PPICT 634
           E FSL R    ++  +  A  L+ AP    +RLL+   TL      +K+VN     P+  
Sbjct: 109 ELFSLLRIKRYKSAGLYDALVLDTAPTGETLRLLSLPDTLSWGMKAVKNVNKYIVRPLSK 168

Query: 635 PHPNPTDKIA 664
           P    +DKIA
Sbjct: 169 PLSKMSDKIA 178

>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor|
          Length = 1943

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
 Frame = +2

Query: 257  IFENRSSRAEYKGCAA------LGFSTLPNRISVVVK*ASP*KRRLVSDLVVTTFPSRET 418
            I  + SS+ E   CA+        F   P+  S+      P   R    +  TTFP   +
Sbjct: 1714 ILNSLSSKRETPTCASDTEPKRNSFEIAPHPPSIFAPLPHPPLPR--PPIAFTTFPLPLS 1771

Query: 419  PTNAPLLQL*V*HIPEPFSLARTSASRALPIGPAAALNPAPRERCMRL 562
            P N P  QL    +P       T  + +LP+ P  +L P PR    RL
Sbjct: 1772 PPNPPPPQLVTFSLP-----ISTPPTSSLPLPPPLSLPPPPRPPAPRL 1814

>LRP2_RAT (P98158) Low-density lipoprotein receptor-related protein 2|
           precursor (Megalin) (Glycoprotein 330) (gp330)
          Length = 4660

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = -2

Query: 430 CICWGLSGRKCGDNQIGHQSALLWGRLLDHDRYPVWEGGEAQSCATLVLSSG*SILKNGL 251
           C  WG+  +KC + Q  HQ     G +L+  ++   +  ++ S A+++ S+G  +L   L
Sbjct: 351 CQIWGICDQKCENRQGRHQCLCEEGYILERGQH--CKSSDSFSAASVIFSNGRDLLVGDL 408

>CDSA_AQUAE (O67292) Phosphatidate cytidylyltransferase (EC 2.7.7.41)|
           (CDP-diglyceride synthetase) (CDP-diglyceride
           pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)
           (CTP:phosphatidate cytidylyltransferase) (CDP-DAG
           synthase) (CDP-DG synthetase)
          Length = 259

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 209 YISLKYGRNPTWEKISQKKNVQLLLGG 129
           YI   +G+ P + KIS KK V+  LGG
Sbjct: 147 YIGKNFGKTPLFPKISPKKTVEGFLGG 173

>LEF2_NPVLD (P36869) Late expression factor 2|
          Length = 216

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 436 AAAVSVAYPRTFFTCSNICFKGSANR 513
           AAA S   P    +C N+CFKG+ +R
Sbjct: 77  AAAASAGQPGRKRSCKNVCFKGATSR 102

>TAF1C_RAT (Q6P773) TATA box-binding protein-associated factor, RNA polymerase|
           I, subunit C (TATA box-binding protein-associated factor
           1C) (TBP-associated factor 1C)
          Length = 842

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
 Frame = +3

Query: 270 DHPELSTRVAQLWASPPSQTGYRSWSSRRPHRSADWC----------PIWLSPHFLPER 416
           DHP      ++  A P  Q    SW+SR   R + W           P+W +P F   R
Sbjct: 580 DHPAPERPASRAAAPPVDQGSTPSWTSRASARCSRWLEALMELSPTNPVWAAPTFSHRR 638


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,803,504
Number of Sequences: 219361
Number of extensions: 2399622
Number of successful extensions: 6411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6406
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)