Clone Name | rbasd3h12 |
---|---|
Clone Library Name | barley_pub |
>ARX1_CANGA (Q6FL44) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 588 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 19 KATSITVCHLDASISANSELDRVYGPDQVQTPNWKPNARE 138 + +++ +C D S+S EL R+ G + P+W +ARE Sbjct: 502 ECSTVILCGSDVSVSGKPELFRLTGGSKTAQPSWVHSARE 541
>HGBC_HAEIN (Q9KIV0) Hemoglobin-binding protein C precursor| Length = 993 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Frame = +3 Query: 24 YINYSLSPRCIHLSKF*ARQSIRTRPGTNSQLE---TKCTGNRNPTV*LLTN---TRKDV 185 Y N+S +P L + Q I+TR T+ + T C G NPT LTN TR++ Sbjct: 332 YENFSQTPFWDTLKLTYSDQRIKTRARTDEYCDAGVTHCQGTENPTGLKLTNGKITRRNG 391 Query: 186 TDYSIEHQVKSEMSRGEGKK 245 TD Q K + + +G K Sbjct: 392 TDL----QFKEKGTAADGTK 407
>YATE_SCHPO (Q09779) Hypothetical protein C1D4.14 in chromosome I| Length = 1628 Score = 30.4 bits (67), Expect = 3.0 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Frame = +3 Query: 78 RQSIRTRPGTN-------SQLETKCTGNRNPTV*LLTNTRKDVTDYSIEH------QVKS 218 R+++RTR TN S+L + +R P TN D H Q ++ Sbjct: 1399 RRALRTRTPTNEDIQRSDSKLREDQSRDRTPQSRSFTNENNDNLRSVSRHTRREPQQAQN 1458 Query: 219 EMSRGEGKKRKEGRDYQSGRISAFMRICETNITNLS 326 +R E + +K R Q+G ++ R+ N TN+S Sbjct: 1459 LNARREHESQKSDRWRQNGNVNRNPRVSNNNSTNVS 1494
>NADB_ANASP (Q8YXJ6) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 578 Score = 29.3 bits (64), Expect = 6.7 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 13/82 (15%) Frame = +2 Query: 293 AHLRD----QYHKSFLLTSMFDGWVVAQKSAPHDSTVINKVARRFASDHVPLQGALPWD- 457 A LRD Q+H + L D +++++ + +++ RRFA D+ P P D Sbjct: 241 AILRDLEFVQFHPTALTKPGADRFLISEAVRGEGAHLVDNEGRRFAFDYHPAGELAPRDV 300 Query: 458 -PRMEFNH-------PAT*HSW 499 R F+H PAT H W Sbjct: 301 VSRAIFSHLQRTAVDPATAHVW 322
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3664 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -1 Query: 128 FGFQLGVCTWSGPYTLSSSEFAEMD 54 FG Q+ V W GP T S +EF +D Sbjct: 402 FGMQIEVTAWIGPETESENEFRPLD 426
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -1 Query: 128 FGFQLGVCTWSGPYTLSSSEFAEMD 54 FG Q+ V W GP T S +EF +D Sbjct: 403 FGMQIEVTAWVGPETESENEFRPLD 427 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,961,616 Number of Sequences: 219361 Number of extensions: 1578124 Number of successful extensions: 4526 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4423 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4525 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)