ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467797.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
3dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
4dbj|AK100919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
5dbj|AK066613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
6gb|BT013462.1| Lycopersicon esculentum clone 132120F, mRNA sequence 44 0.45
7gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, com... 44 0.45
8gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, com... 44 0.45
9gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genom... 42 1.8
10gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, co... 42 1.8
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
12emb|AL589877.13| Human DNA sequence from clone RP11-236M5 on chr... 42 1.8
13emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
14gb|AC110048.2| Homo sapiens chromosome 15, clone RP11-622C24, co... 42 1.8
15gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, com... 42 1.8
16gb|AC090461.4| Homo sapiens chromosome 15, clone RP11-100A11, co... 42 1.8
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
19gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosom... 42 1.8
20gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, comp... 42 1.8
21gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, co... 42 1.8
22emb|BX538221.1|HSM806453 Homo sapiens mRNA; cDNA DKFZp686F0529 (... 42 1.8
23emb|BX538204.1|HSM806433 Homo sapiens mRNA; cDNA DKFZp686F0429 (... 42 1.8
24gb|AY829238.1| Bubalus bubalis c-kit protooncogene receptor mRNA... 40 7.0
25gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, co... 40 7.0
26emb|Z68113.2|CEE03G2 Caenorhabditis elegans Cosmid E03G2, comple... 40 7.0
27emb|AL772202.14| Human DNA sequence from clone RP11-791O21 on ch... 40 7.0
28emb|AL592310.6| Human DNA sequence from clone RP4-566D2 on chrom... 40 7.0
29emb|AL591399.3| Zebrafish DNA sequence from clone BUSM1-172D23 i... 40 7.0
30emb|CR352230.8| Zebrafish DNA sequence from clone CH211-106G8 in... 40 7.0
31gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 ma... 40 7.0
32gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, compl... 40 7.0
33ref|XM_684909.1| PREDICTED: Danio rerio similar to axonemal dyne... 40 7.0
34ref|XM_684654.1| PREDICTED: Danio rerio similar to axonemal dyne... 40 7.0
35emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 7.0
36emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 i... 40 7.0
37gb|DQ314491.1| Bubalus bubalis tissue-type testis proto-oncogene... 40 7.0
38gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, co... 40 7.0
39emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chr... 40 7.0
40emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chr... 40 7.0 
>ref|XM_467797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2063

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Minus

                                                                        
Query: 365  aaatcagcaccccatgacagcacagttataaacaaagttgccagaaggtttgcttccgat 424
            ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1678 aaatcagcaccccatgacagcacagttataaacaaagttaccagaaggcttgctcccgat 1619

                                                                        
Query: 425  catgttccattgcaaggggccctcccttgggatccacgaatggagttcaatcatcccgcc 484
            |||||||||  |||| || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 1618 catgttccaccgcaacggcccctccctcgggatccatgaatggagctcaatcatcccccc 1559

                                         
Query: 485  acctagcactcttggtccaccaatcacca 513
             || | |||||||||||||||||||||||
Sbjct: 1558 tcccatcactcttggtccaccaatcacca 1530



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 28   tcaattacagtttgtcacctagatgcatccatc 60
            ||||||||||||||||  ||| |||||||||||
Sbjct: 1962 tcaattacagtttgtcgactaaatgcatccatc 1930



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 190  actactctattgaacatcaagtaaaatctgaaatgtc 226
            |||||||||||||||  |  |||||||||||||||||
Sbjct: 1825 actactctattgaaccacgtgtaaaatctgaaatgtc 1789
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                            
Query: 365      aaatcagcaccccatgacagcacagttataaacaaagttgccagaaggtttgcttccgat 424
                ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 31463556 aaatcagcaccccatgacagcacagttataaacaaagttaccagaaggcttgctcccgat 31463615

                                                                            
Query: 425      catgttccattgcaaggggccctcccttgggatccacgaatggagttcaatcatcccgcc 484
                |||||||||  |||| || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 31463616 catgttccaccgcaacggcccctccctcgggatccatgaatggagctcaatcatcccccc 31463675

                                             
Query: 485      acctagcactcttggtccaccaatcacca 513
                 || | |||||||||||||||||||||||
Sbjct: 31463676 tcccatcactcttggtccaccaatcacca 31463704



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 190      actactctattgaacatcaagtaaaatctgaaatgtc 226
                |||||||||||||||  |  |||||||||||||||||
Sbjct: 31463409 actactctattgaaccacgtgtaaaatctgaaatgtc 31463445



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 28       tcaattacagtttgtcacctagatgcatccatc 60
                ||||||||||||||||  ||| |||||||||||
Sbjct: 31463272 tcaattacagtttgtcgactaaatgcatccatc 31463304
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0078N11
          Length = 155168

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                         
Query: 365   aaatcagcaccccatgacagcacagttataaacaaagttgccagaaggtttgcttccgat 424
             ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 98953 aaatcagcaccccatgacagcacagttataaacaaagttaccagaaggcttgctcccgat 99012

                                                                         
Query: 425   catgttccattgcaaggggccctcccttgggatccacgaatggagttcaatcatcccgcc 484
             |||||||||  |||| || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 99013 catgttccaccgcaacggcccctccctcgggatccatgaatggagctcaatcatcccccc 99072

                                          
Query: 485   acctagcactcttggtccaccaatcacca 513
              || | |||||||||||||||||||||||
Sbjct: 99073 tcccatcactcttggtccaccaatcacca 99101



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 190   actactctattgaacatcaagtaaaatctgaaatgtc 226
             |||||||||||||||  |  |||||||||||||||||
Sbjct: 98806 actactctattgaaccacgtgtaaaatctgaaatgtc 98842



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 28    tcaattacagtttgtcacctagatgcatccatc 60
             ||||||||||||||||  ||| |||||||||||
Sbjct: 98669 tcaattacagtttgtcgactaaatgcatccatc 98701
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>dbj|AK100919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133K05, full
           insert sequence
          Length = 790

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Minus

                                                                       
Query: 365 aaatcagcaccccatgacagcacagttataaacaaagttgccagaaggtttgcttccgat 424
           ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 746 aaatcagcaccccatgacagcacagttataaacaaagttaccagaaggcttgctcccgat 687

                                                                       
Query: 425 catgttccattgcaaggggccctcccttgggatccacgaatggagttcaatcatcccgcc 484
           |||||||||  |||| || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 686 catgttccaccgcaacggcccctccctcgggatccatgaatggagctcaatcatcccccc 627

                                        
Query: 485 acctagcactcttggtccaccaatcacca 513
            || | |||||||||||||||||||||||
Sbjct: 626 tcccatcactcttggtccaccaatcacca 598
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>dbj|AK066613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O20, full
            insert sequence
          Length = 2062

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Minus

                                                                        
Query: 365  aaatcagcaccccatgacagcacagttataaacaaagttgccagaaggtttgcttccgat 424
            ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1677 aaatcagcaccccatgacagcacagttataaacaaagttaccagaaggcttgctcccgat 1618

                                                                        
Query: 425  catgttccattgcaaggggccctcccttgggatccacgaatggagttcaatcatcccgcc 484
            |||||||||  |||| || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 1617 catgttccaccgcaacggcccctccctcgggatccatgaatggagctcaatcatcccccc 1558

                                         
Query: 485  acctagcactcttggtccaccaatcacca 513
             || | |||||||||||||||||||||||
Sbjct: 1557 tcccatcactcttggtccaccaatcacca 1529



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 28   tcaattacagtttgtcacctagatgcatccatc 60
            ||||||||||||||||  ||| |||||||||||
Sbjct: 1961 tcaattacagtttgtcgactaaatgcatccatc 1929



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 190  actactctattgaacatcaagtaaaatctgaaatgtc 226
            |||||||||||||||  |  |||||||||||||||||
Sbjct: 1824 actactctattgaaccacgtgtaaaatctgaaatgtc 1788
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>gb|BT013462.1| Lycopersicon esculentum clone 132120F, mRNA sequence
          Length = 1898

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 368  tcagcaccccatgacagcacagttataaacaaag 401
            |||||| |||||||||||||| ||||| ||||||
Sbjct: 1508 tcagcaacccatgacagcacaattatacacaaag 1475
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>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence
          Length = 216377

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 247    gaaaagaaggcagagattacca 268
              ||||||||||||||||||||||
Sbjct: 126722 gaaaagaaggcagagattacca 126743
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>gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, complete sequence
          Length = 186276

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 247    gaaaagaaggcagagattacca 268
              ||||||||||||||||||||||
Sbjct: 104438 gaaaagaaggcagagattacca 104459
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>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete
             sequence
          Length = 126163

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 432   cattgcaaggggccctccctt 452
             |||||||||||||||||||||
Sbjct: 90907 cattgcaaggggccctccctt 90887
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>gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, complete sequence
          Length = 192662

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 268    aatcaggcagaatcagtgcttttat 292
              |||||||||||| ||||||||||||
Sbjct: 177855 aatcaggcagaagcagtgcttttat 177879
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 432      cattgcaaggggccctccctt 452
                |||||||||||||||||||||
Sbjct: 16165728 cattgcaaggggccctccctt 16165708
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>emb|AL589877.13| Human DNA sequence from clone RP11-236M5 on chromosome X Contains a
             suppression of tumorigenicity 13 (colon carcinoma) (Hsp70
             interacting protein) (ST13) pseudogene, complete sequence
          Length = 119032

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 136   gaaacagaaacccaacagtgtaact 160
             |||||||||| ||||||||||||||
Sbjct: 20865 gaaacagaaagccaacagtgtaact 20889
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>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23,
             complete sequence
          Length = 133759

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 369   cagcaccccatgacagcacagttat 393
             |||||||||||| ||||||||||||
Sbjct: 81145 cagcaccccatggcagcacagttat 81169
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>gb|AC110048.2| Homo sapiens chromosome 15, clone RP11-622C24, complete sequence
          Length = 163592

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 386   acagttataaacaaagttgccagaaggtt 414
             ||||||||| ||||||||||||| |||||
Sbjct: 42055 acagttatagacaaagttgccaggaggtt 42083
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>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence
          Length = 220807

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 386    acagttataaacaaagttgccagaaggtt 414
              ||||||||| ||||||||||||| |||||
Sbjct: 157001 acagttatagacaaagttgccaggaggtt 157029
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>gb|AC090461.4| Homo sapiens chromosome 15, clone RP11-100A11, complete sequence
          Length = 167218

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 386   acagttataaacaaagttgccagaaggtt 414
             ||||||||| ||||||||||||| |||||
Sbjct: 42220 acagttatagacaaagttgccaggaggtt 42248
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 369      cagcaccccatgacagcacagttat 393
                |||||||||||| ||||||||||||
Sbjct: 19792683 cagcaccccatggcagcacagttat 19792707
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 432      cattgcaaggggccctccctt 452
                |||||||||||||||||||||
Sbjct: 16160261 cattgcaaggggccctccctt 16160241
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>gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosome 13, complete
             sequence
          Length = 197149

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 268   aatcaggcagaatcagtgcttttat 292
             |||||||||||| ||||||||||||
Sbjct: 91130 aatcaggcagaagcagtgcttttat 91154
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>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence
          Length = 177317

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cagagattaccaatcaggcag 277
             |||||||||||||||||||||
Sbjct: 77685 cagagattaccaatcaggcag 77705
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>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence
          Length = 182865

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   cagagattaccaatcaggcag 277
             |||||||||||||||||||||
Sbjct: 49467 cagagattaccaatcaggcag 49447
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>emb|BX538221.1|HSM806453 Homo sapiens mRNA; cDNA DKFZp686F0529 (from clone DKFZp686F0529)
          Length = 6904

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  acagttataaacaaagttgccagaaggtt 414
            ||||||||| ||||||||||||| |||||
Sbjct: 3367 acagttatagacaaagttgccaggaggtt 3339
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>emb|BX538204.1|HSM806433 Homo sapiens mRNA; cDNA DKFZp686F0429 (from clone DKFZp686F0429)
          Length = 6904

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  acagttataaacaaagttgccagaaggtt 414
            ||||||||| ||||||||||||| |||||
Sbjct: 3367 acagttatagacaaagttgccaggaggtt 3339
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>gb|AY829238.1| Bubalus bubalis c-kit protooncogene receptor mRNA, partial sequence
          Length = 2150

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 301  gcgagaccaatatcacaaatcttt 324
            |||||||||| |||||||||||||
Sbjct: 1663 gcgagaccaaaatcacaaatcttt 1640
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>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence
          Length = 202993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cacgggaaacagaaacccaa 150
              ||||||||||||||||||||
Sbjct: 142583 cacgggaaacagaaacccaa 142564
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>emb|Z68113.2|CEE03G2 Caenorhabditis elegans Cosmid E03G2, complete sequence
          Length = 32112

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   tgactactctattgaacatcaagt 211
             |||||||||||||||| |||||||
Sbjct: 26039 tgactactctattgaatatcaagt 26062
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>emb|AL772202.14| Human DNA sequence from clone RP11-791O21 on chromosome 9 Contains a
             PEST-containing nuclear protein (PEST) pseudogene, a novel
             gene (FLJ37523), a novel gene, the EDG3 gene for
             endothelial differentiation, sphingolipid
             G-protein-coupled receptor, 3 and a CpG island, complete
             sequence
          Length = 55956

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   agaaggcagagattaccaat 270
             ||||||||||||||||||||
Sbjct: 30393 agaaggcagagattaccaat 30374
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>emb|AL592310.6| Human DNA sequence from clone RP4-566D2 on chromosome 1 Contains a
             novel pseudogene and the 3' end of a novel gene
             (MGC42493), complete sequence
          Length = 111140

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   gtggcacagaaatcagcacc 375
             ||||||||||||||||||||
Sbjct: 27657 gtggcacagaaatcagcacc 27638
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>emb|AL591399.3| Zebrafish DNA sequence from clone BUSM1-172D23 in linkage group 2
            Contains 24 TCR-alpha V segments (II-85 to II-108) two of
            which are pseudogenes (II-92 and II-104), 3 C segments,
            13 J segments and a CpG island, complete sequence
          Length = 97774

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  aatatcacaaatctttcttg 328
            ||||||||||||||||||||
Sbjct: 4601 aatatcacaaatctttcttg 4582
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>emb|CR352230.8| Zebrafish DNA sequence from clone CH211-106G8 in linkage group 2,
              complete sequence
          Length = 168916

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    aatatcacaaatctttcttg 328
              ||||||||||||||||||||
Sbjct: 104490 aatatcacaaatctttcttg 104471
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>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete
             sequence
          Length = 96371

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   aaagaaggcagagattacca 268
             ||||||||||||||||||||
Sbjct: 18692 aaagaaggcagagattacca 18711
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>gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, complete sequence
          Length = 214025

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 185    gactgactactctattgaacatca 208
              ||||||||| ||||||||||||||
Sbjct: 195716 gactgactattctattgaacatca 195739
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>ref|XM_684909.1| PREDICTED: Danio rerio similar to axonemal dynein heavy chain 7
           (LOC561506), mRNA
          Length = 3081

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 cacagaaatcagcaccccat 379
           ||||||||||||||||||||
Sbjct: 327 cacagaaatcagcaccccat 346
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>ref|XM_684654.1| PREDICTED: Danio rerio similar to axonemal dynein heavy chain 7
           (LOC561248), mRNA
          Length = 4656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 cacagaaatcagcaccccat 379
           ||||||||||||||||||||
Sbjct: 327 cacagaaatcagcaccccat 346
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 422     gatcatgttccattgcaagg 441
               ||||||||||||||||||||
Sbjct: 1392215 gatcatgttccattgcaagg 1392234
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>emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 in linkage group 9,
              complete sequence
          Length = 172918

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    cacagaaatcagcaccccat 379
              ||||||||||||||||||||
Sbjct: 138612 cacagaaatcagcaccccat 138631
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>gb|DQ314491.1| Bubalus bubalis tissue-type testis proto-oncogene c-kit receptor
            mRNA, complete cds
          Length = 2971

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 301  gcgagaccaatatcacaaatcttt 324
            |||||||||| |||||||||||||
Sbjct: 2487 gcgagaccaaaatcacaaatcttt 2464
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>gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, complete sequence
          Length = 204140

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    agaccaggtacaaactccca 115
             ||||||||||||||||||||
Sbjct: 68823 agaccaggtacaaactccca 68842
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>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   tggtggcacagaaatcagca 373
             ||||||||||||||||||||
Sbjct: 91205 tggtggcacagaaatcagca 91224
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>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete
              sequence
          Length = 226220

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    aagaaggcagagattaccaa 269
              ||||||||||||||||||||
Sbjct: 134145 aagaaggcagagattaccaa 134164


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,533,051
Number of Sequences: 3902068
Number of extensions: 4533051
Number of successful extensions: 82061
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81904
Number of HSP's gapped (non-prelim): 157
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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