ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 321 1e-84
2dbj|AK073946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 321 1e-84
4emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388... 321 1e-84
5emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 141 3e-30
6gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 42 2.0
7gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
8gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
9gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete se... 42 2.0
10gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosom... 42 2.0
11gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, compl... 42 2.0
12gb|AC117249.3| Mus musculus BAC clone RP24-347M10 from 8, comple... 42 2.0
13gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B... 42 2.0
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
15dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16emb|AL163052.4|CNS01RIB Human chromosome 14 DNA sequence BAC R-7... 42 2.0
17ref|XM_632507.1| Dictyostelium discoideum SAPLIP C protein (DDB0... 40 8.0
18gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, co... 40 8.0
19gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, c... 40 8.0
20gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosom... 40 8.0
21gb|AY438039.1| Macropus eugenii MHC class II antigen (Maeu-DBB) ... 40 8.0
22emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chr... 40 8.0
23gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complet... 40 8.0
24emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chr... 40 8.0
25gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence 40 8.0
26emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 i... 40 8.0
27emb|BX465860.7| Zebrafish DNA sequence from clone DKEY-29L21 in ... 40 8.0
28emb|AL953848.17| Zebrafish DNA sequence from clone CH211-244K5 i... 40 8.0
29gb|AC117871.5| Rattus norvegicus X BAC CH230-335H24 (Children's ... 40 8.0
30gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 8.0
31dbj|AB208128.1| Trichechus manatus DNA, AfroSINE locus Ma063 40 8.0
32gb|AC084579.1|CBRG40E01 Caenorhabditis briggsae cosmid G40E01, c... 40 8.0
33emb|AL806515.7| Mouse DNA sequence from clone RP23-434M18 on chr... 40 8.0
34emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, ... 40 8.0
35emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in... 40 8.0
36gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, com... 40 8.0
37gb|AF175768.1|AF175768 Dictyostelium discoideum SAPLIP C protein... 40 8.0
38emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chro... 40 8.0
39gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, co... 40 8.0
40emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chrom... 40 8.0 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  321 bits (162), Expect = 1e-84
 Identities = 372/438 (84%), Gaps = 3/438 (0%)
 Strand = Plus / Plus

                                                                            
Query: 154      gttcatttccagcaattgtgtaagagacacagaactccaccgttcagctccctcttggag 213
                ||||||||| | ||||||||||||||| |||| |||||| |  |||  ||| ||||| ||
Sbjct: 26157817 gttcatttctatcaattgtgtaagagagacagcactccatctctcaattccttcttgaag 26157876

                                                                            
Query: 214      ttgggcatagagtagtcgcttgacggaatcaatgcaaatactcacggtgccaaattcata 273
                ||| || |||||||| ||||| || || || ||||||||||| ||||||||||| |||||
Sbjct: 26157877 ttgtgcgtagagtaggcgcttcacagagtcgatgcaaatacttacggtgccaaactcata 26157936

                                                                            
Query: 274      cacttgcatacctttgtagaatttgttaactctaggcataaacaacaaaccttggtcacc 333
                |||| ||||||| |||||||||||   |||||| ||||||||||| || ||||||||   
Sbjct: 26157937 cactggcataccattgtagaatttaccaactctgggcataaacaataagccttggtccat 26157996

                                                                            
Query: 334      cgcatatgcctgaatagactccttgaagctcatctctgacatggctgctcctggcacagc 393
                 ||||||||||| ||||||||||| |||||||| || | |||||||||||||||||| ||
Sbjct: 26157997 tgcatatgcctggatagactccttaaagctcatatccgccatggctgctcctggcaccgc 26158056

                                                                            
Query: 394      atggtaagatgggtattgcgatgcttgctgtgctgcatcaaattgccgcttctctgttgc 453
                ||||| ||    |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 26158057 atggtgagtcatgtattgtgatgcttgctgtgctgcatcaaattgcctcttctctgttgc 26158116

                                                                            
Query: 454      tctcaagaagccaacattctccctagcccctggctgtgccaactcatgtccttcagcagc 513
                ||||||| |||| ||||| |||||||| || || ||  ||| |||| | |||||||||||
Sbjct: 26158117 tctcaagtagcccacattttccctagcgccaggttgcaccacctcaaggccttcagcagc 26158176

                                                                            
Query: 514      tttggttcatcatctcaagaccagccgttagaagcatccgtatgcgttcattgggcaagt 573
                |  |||||||||| ||||| |||||||||| ||||||||||||||| ||||||| |||| 
Sbjct: 26158177 tc-ggttcatcatgtcaaggccagccgttaaaagcatccgtatgcgctcattgg-caagc 26158234

                                  
Query: 574      aacctctggtgggaaaag 591
                ||  ||||||||||||||
Sbjct: 26158235 aat-tctggtgggaaaag 26158251



 Score =  141 bits (71), Expect = 3e-30
 Identities = 164/195 (84%)
 Strand = Plus / Minus

                                                                            
Query: 171      gtgtaagagacacagaactccaccgttcagctccctcttggagttgggcatagagtagtc 230
                ||||||||||||||| |||||| |  |||  ||| ||||| ||||| || ||||||||  
Sbjct: 25853267 gtgtaagagacacagcactccatctctcaattccttcttgaagttgtgcttagagtaggt 25853208

                                                                            
Query: 231      gcttgacggaatcaatgcaaatactcacggtgccaaattcatacacttgcatacctttgt 290
                |||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 25853207 gcttcacagaatcaatgcaaatactcacggtgccaaactcatacactggcataccattgt 25853148

                                                                            
Query: 291      agaatttgttaactctaggcataaacaacaaaccttggtcacccgcatatgcctgaatag 350
                |||||||   |||||||||||||||||  || |||||  |    ||||||||||| ||||
Sbjct: 25853147 agaatttaccaactctaggcataaacagtaagccttgtgccattgcatatgcctggatag 25853088

                               
Query: 351      actccttgaagctca 365
                ||||||| |||||||
Sbjct: 25853087 actccttaaagctca 25853073
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>dbj|AK073946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N19, full
            insert sequence
          Length = 2778

 Score =  321 bits (162), Expect = 1e-84
 Identities = 372/438 (84%), Gaps = 3/438 (0%)
 Strand = Plus / Minus

                                                                        
Query: 154  gttcatttccagcaattgtgtaagagacacagaactccaccgttcagctccctcttggag 213
            ||||||||| | ||||||||||||||| |||| |||||| |  |||  ||| ||||| ||
Sbjct: 2582 gttcatttctatcaattgtgtaagagagacagcactccatctctcaattccttcttgaag 2523

                                                                        
Query: 214  ttgggcatagagtagtcgcttgacggaatcaatgcaaatactcacggtgccaaattcata 273
            ||| || |||||||| ||||| || || || ||||||||||| ||||||||||| |||||
Sbjct: 2522 ttgtgcgtagagtaggcgcttcacagagtcgatgcaaatacttacggtgccaaactcata 2463

                                                                        
Query: 274  cacttgcatacctttgtagaatttgttaactctaggcataaacaacaaaccttggtcacc 333
            |||| ||||||| |||||||||||   |||||| ||||||||||| || ||||||||   
Sbjct: 2462 cactggcataccattgtagaatttaccaactctgggcataaacaataagccttggtccat 2403

                                                                        
Query: 334  cgcatatgcctgaatagactccttgaagctcatctctgacatggctgctcctggcacagc 393
             ||||||||||| ||||||||||| |||||||| || | |||||||||||||||||| ||
Sbjct: 2402 tgcatatgcctggatagactccttaaagctcatatccgccatggctgctcctggcaccgc 2343

                                                                        
Query: 394  atggtaagatgggtattgcgatgcttgctgtgctgcatcaaattgccgcttctctgttgc 453
            ||||| ||    |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2342 atggtgagtcatgtattgtgatgcttgctgtgctgcatcaaattgcctcttctctgttgc 2283

                                                                        
Query: 454  tctcaagaagccaacattctccctagcccctggctgtgccaactcatgtccttcagcagc 513
            ||||||| |||| ||||| |||||||| || || ||  ||| |||| | |||||||||||
Sbjct: 2282 tctcaagtagcccacattttccctagcgccaggttgcaccacctcaaggccttcagcagc 2223

                                                                        
Query: 514  tttggttcatcatctcaagaccagccgttagaagcatccgtatgcgttcattgggcaagt 573
            |  |||||||||| ||||| |||||||||| ||||||||||||||| ||||||| |||| 
Sbjct: 2222 tc-ggttcatcatgtcaaggccagccgttaaaagcatccgtatgcgctcattgg-caagc 2165

                              
Query: 574  aacctctggtgggaaaag 591
            ||  ||||||||||||||
Sbjct: 2164 aat-tctggtgggaaaag 2148
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  321 bits (162), Expect = 1e-84
 Identities = 372/438 (84%), Gaps = 3/438 (0%)
 Strand = Plus / Plus

                                                                            
Query: 154      gttcatttccagcaattgtgtaagagacacagaactccaccgttcagctccctcttggag 213
                ||||||||| | ||||||||||||||| |||| |||||| |  |||  ||| ||||| ||
Sbjct: 26085993 gttcatttctatcaattgtgtaagagagacagcactccatctctcaattccttcttgaag 26086052

                                                                            
Query: 214      ttgggcatagagtagtcgcttgacggaatcaatgcaaatactcacggtgccaaattcata 273
                ||| || |||||||| ||||| || || || ||||||||||| ||||||||||| |||||
Sbjct: 26086053 ttgtgcgtagagtaggcgcttcacagagtcgatgcaaatacttacggtgccaaactcata 26086112

                                                                            
Query: 274      cacttgcatacctttgtagaatttgttaactctaggcataaacaacaaaccttggtcacc 333
                |||| ||||||| |||||||||||   |||||| ||||||||||| || ||||||||   
Sbjct: 26086113 cactggcataccattgtagaatttaccaactctgggcataaacaataagccttggtccat 26086172

                                                                            
Query: 334      cgcatatgcctgaatagactccttgaagctcatctctgacatggctgctcctggcacagc 393
                 ||||||||||| ||||||||||| |||||||| || | |||||||||||||||||| ||
Sbjct: 26086173 tgcatatgcctggatagactccttaaagctcatatccgccatggctgctcctggcaccgc 26086232

                                                                            
Query: 394      atggtaagatgggtattgcgatgcttgctgtgctgcatcaaattgccgcttctctgttgc 453
                ||||| ||    |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 26086233 atggtgagtcatgtattgtgatgcttgctgtgctgcatcaaattgcctcttctctgttgc 26086292

                                                                            
Query: 454      tctcaagaagccaacattctccctagcccctggctgtgccaactcatgtccttcagcagc 513
                ||||||| |||| ||||| |||||||| || || ||  ||| |||| | |||||||||||
Sbjct: 26086293 tctcaagtagcccacattttccctagcgccaggttgcaccacctcaaggccttcagcagc 26086352

                                                                            
Query: 514      tttggttcatcatctcaagaccagccgttagaagcatccgtatgcgttcattgggcaagt 573
                |  |||||||||| ||||| |||||||||| ||||||||||||||| ||||||| |||| 
Sbjct: 26086353 tc-ggttcatcatgtcaaggccagccgttaaaagcatccgtatgcgctcattgg-caagc 26086410

                                  
Query: 574      aacctctggtgggaaaag 591
                ||  ||||||||||||||
Sbjct: 26086411 aat-tctggtgggaaaag 26086427



 Score =  141 bits (71), Expect = 3e-30
 Identities = 164/195 (84%)
 Strand = Plus / Minus

                                                                            
Query: 171      gtgtaagagacacagaactccaccgttcagctccctcttggagttgggcatagagtagtc 230
                ||||||||||||||| |||||| |  |||  ||| ||||| ||||| || ||||||||  
Sbjct: 25781443 gtgtaagagacacagcactccatctctcaattccttcttgaagttgtgcttagagtaggt 25781384

                                                                            
Query: 231      gcttgacggaatcaatgcaaatactcacggtgccaaattcatacacttgcatacctttgt 290
                |||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 25781383 gcttcacagaatcaatgcaaatactcacggtgccaaactcatacactggcataccattgt 25781324

                                                                            
Query: 291      agaatttgttaactctaggcataaacaacaaaccttggtcacccgcatatgcctgaatag 350
                |||||||   |||||||||||||||||  || |||||  |    ||||||||||| ||||
Sbjct: 25781323 agaatttaccaactctaggcataaacagtaagccttgtgccattgcatatgcctggatag 25781264

                               
Query: 351      actccttgaagctca 365
                ||||||| |||||||
Sbjct: 25781263 actccttaaagctca 25781249
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>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144241

 Score =  321 bits (162), Expect = 1e-84
 Identities = 372/438 (84%), Gaps = 3/438 (0%)
 Strand = Plus / Plus

                                                                         
Query: 154   gttcatttccagcaattgtgtaagagacacagaactccaccgttcagctccctcttggag 213
             ||||||||| | ||||||||||||||| |||| |||||| |  |||  ||| ||||| ||
Sbjct: 48055 gttcatttctatcaattgtgtaagagagacagcactccatctctcaattccttcttgaag 48114

                                                                         
Query: 214   ttgggcatagagtagtcgcttgacggaatcaatgcaaatactcacggtgccaaattcata 273
             ||| || |||||||| ||||| || || || ||||||||||| ||||||||||| |||||
Sbjct: 48115 ttgtgcgtagagtaggcgcttcacagagtcgatgcaaatacttacggtgccaaactcata 48174

                                                                         
Query: 274   cacttgcatacctttgtagaatttgttaactctaggcataaacaacaaaccttggtcacc 333
             |||| ||||||| |||||||||||   |||||| ||||||||||| || ||||||||   
Sbjct: 48175 cactggcataccattgtagaatttaccaactctgggcataaacaataagccttggtccat 48234

                                                                         
Query: 334   cgcatatgcctgaatagactccttgaagctcatctctgacatggctgctcctggcacagc 393
              ||||||||||| ||||||||||| |||||||| || | |||||||||||||||||| ||
Sbjct: 48235 tgcatatgcctggatagactccttaaagctcatatccgccatggctgctcctggcaccgc 48294

                                                                         
Query: 394   atggtaagatgggtattgcgatgcttgctgtgctgcatcaaattgccgcttctctgttgc 453
             ||||| ||    |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 48295 atggtgagtcatgtattgtgatgcttgctgtgctgcatcaaattgcctcttctctgttgc 48354

                                                                         
Query: 454   tctcaagaagccaacattctccctagcccctggctgtgccaactcatgtccttcagcagc 513
             ||||||| |||| ||||| |||||||| || || ||  ||| |||| | |||||||||||
Sbjct: 48355 tctcaagtagcccacattttccctagcgccaggttgcaccacctcaaggccttcagcagc 48414

                                                                         
Query: 514   tttggttcatcatctcaagaccagccgttagaagcatccgtatgcgttcattgggcaagt 573
             |  |||||||||| ||||| |||||||||| ||||||||||||||| ||||||| |||| 
Sbjct: 48415 tc-ggttcatcatgtcaaggccagccgttaaaagcatccgtatgcgctcattgg-caagc 48472

                               
Query: 574   aacctctggtgggaaaag 591
             ||  ||||||||||||||
Sbjct: 48473 aat-tctggtgggaaaag 48489
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score =  141 bits (71), Expect = 3e-30
 Identities = 164/195 (84%)
 Strand = Plus / Minus

                                                                         
Query: 171   gtgtaagagacacagaactccaccgttcagctccctcttggagttgggcatagagtagtc 230
             ||||||||||||||| |||||| |  |||  ||| ||||| ||||| || ||||||||  
Sbjct: 74718 gtgtaagagacacagcactccatctctcaattccttcttgaagttgtgcttagagtaggt 74659

                                                                         
Query: 231   gcttgacggaatcaatgcaaatactcacggtgccaaattcatacacttgcatacctttgt 290
             |||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 74658 gcttcacagaatcaatgcaaatactcacggtgccaaactcatacactggcataccattgt 74599

                                                                         
Query: 291   agaatttgttaactctaggcataaacaacaaaccttggtcacccgcatatgcctgaatag 350
             |||||||   |||||||||||||||||  || |||||  |    ||||||||||| ||||
Sbjct: 74598 agaatttaccaactctaggcataaacagtaagccttgtgccattgcatatgcctggatag 74539

                            
Query: 351   actccttgaagctca 365
             ||||||| |||||||
Sbjct: 74538 actccttaaagctca 74524
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>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    tcatttccagcaattgtgtaa 176
              |||||||||||||||||||||
Sbjct: 163586 tcatttccagcaattgtgtaa 163606
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>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 119   ttatatatgatctcctaatgtggtcttgc 147
             |||||||| ||||||||||||||| ||||
Sbjct: 12092 ttatatataatctcctaatgtggttttgc 12120
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 119   ttatatatgatctcctaatgtggtcttgc 147
             |||||||| ||||||||||||||| ||||
Sbjct: 51151 ttatatataatctcctaatgtggttttgc 51123
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>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence
          Length = 170350

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     tgctcacaaaaatgatcacat 106
              |||||||||||||||||||||
Sbjct: 107305 tgctcacaaaaatgatcacat 107325
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>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence
          Length = 179327

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    cttccaagttatatatgatct 131
              |||||||||||||||||||||
Sbjct: 140500 cttccaagttatatatgatct 140520
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>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence
          Length = 173805

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   cttccaagttatatatgatct 131
             |||||||||||||||||||||
Sbjct: 69345 cttccaagttatatatgatct 69365
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>gb|AC117249.3| Mus musculus BAC clone RP24-347M10 from 8, complete sequence
          Length = 177116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 502   tccttcagcagctttggttcatcat 526
             ||||||||||||||||| |||||||
Sbjct: 72805 tccttcagcagctttgggtcatcat 72829
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>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence
          Length = 126010

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    tcagatacatcatcagaaact 57
             |||||||||||||||||||||
Sbjct: 70243 tcagatacatcatcagaaact 70263
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 119      ttatatatgatctcctaatgtggtcttgc 147
                |||||||| ||||||||||||||| ||||
Sbjct: 12342680 ttatatataatctcctaatgtggttttgc 12342708
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 119    ttatatatgatctcctaatgtggtcttgc 147
              |||||||| ||||||||||||||| ||||
Sbjct: 101329 ttatatataatctcctaatgtggttttgc 101357
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>emb|AL163052.4|CNS01RIB Human chromosome 14 DNA sequence BAC R-769B21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181905

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    ttcctgttgaaatgtggaaaa 31
             |||||||||||||||||||||
Sbjct: 26371 ttcctgttgaaatgtggaaaa 26351
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>ref|XM_632507.1| Dictyostelium discoideum SAPLIP C protein (DDB0191411), partial
           mRNA
          Length = 474

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 514 tttggttcatcatctcaaga 533
           ||||||||||||||||||||
Sbjct: 367 tttggttcatcatctcaaga 386
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>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence
          Length = 202279

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ctgacatggctgctcctggc 388
             ||||||||||||||||||||
Sbjct: 68637 ctgacatggctgctcctggc 68618
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>gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, complete sequence
          Length = 212015

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    taagagacacagaactccac 193
              ||||||||||||||||||||
Sbjct: 181584 taagagacacagaactccac 181603
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>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete
             sequence
          Length = 175685

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   agactccttgaagctcatctctga 372
             ||||||| ||||||||||||||||
Sbjct: 65992 agactccatgaagctcatctctga 66015
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>gb|AY438039.1| Macropus eugenii MHC class II antigen (Maeu-DBB) mRNA, Maeu-DBB*02
           allele, complete cds
          Length = 1269

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gctcatctctgacatggctg 380
           ||||||||||||||||||||
Sbjct: 86  gctcatctctgacatggctg 105
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>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12,
           complete sequence
          Length = 219782

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 taagagacacagaactccac 193
           ||||||||||||||||||||
Sbjct: 558 taagagacacagaactccac 577
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>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence
          Length = 225940

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tcagaaactttgttctttat 68
             ||||||||||||||||||||
Sbjct: 63774 tcagaaactttgttctttat 63793
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>emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chromosome 13 Contains an
             olfactory receptor pseudogene,  a novel gene (RGC32), the
             3' end of a novel gene (contains KIAA0564 and FLJ21779)
             possible ortholog of RIKEN cDNA 1300010F03 gene, and 2 CpG
             islands, complete sequence
          Length = 158871

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ctccttgaagctcatctctg 371
             ||||||||||||||||||||
Sbjct: 61357 ctccttgaagctcatctctg 61376
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>gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence
          Length = 169553

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   tgctctcaagaagccaacat 470
             ||||||||||||||||||||
Sbjct: 60915 tgctctcaagaagccaacat 60896
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>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18,
              complete sequence
          Length = 143863

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    catatgcctgaatagactcc 355
              ||||||||||||||||||||
Sbjct: 122529 catatgcctgaatagactcc 122510
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>emb|BX465860.7| Zebrafish DNA sequence from clone DKEY-29L21 in linkage group 1,
             complete sequence
          Length = 153901

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tctaggcataaacaacaaac 323
             ||||||||||||||||||||
Sbjct: 42753 tctaggcataaacaacaaac 42734
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>emb|AL953848.17| Zebrafish DNA sequence from clone CH211-244K5 in linkage group 6,
              complete sequence
          Length = 201360

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    aaattcatacacttgcataccttt 288
              |||| |||||||||||||||||||
Sbjct: 155158 aaatacatacacttgcataccttt 155135
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>gb|AC117871.5| Rattus norvegicus X BAC CH230-335H24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 148497

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 461    aagccaacattctccctagcccct 484
              |||||||||||| |||||||||||
Sbjct: 101987 aagccaacattccccctagcccct 102010
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       aaaaccggttcctgttgaaa 22
               ||||||||||||||||||||
Sbjct: 1457188 aaaaccggttcctgttgaaa 1457169
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>dbj|AB208128.1| Trichechus manatus DNA, AfroSINE locus Ma063
          Length = 600

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 tctaggcataaacaacaaac 323
           ||||||||||||||||||||
Sbjct: 328 tctaggcataaacaacaaac 347
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>gb|AC084579.1|CBRG40E01 Caenorhabditis briggsae cosmid G40E01, complete sequence
          Length = 11697

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 194  cgttcagctccctcttggagttgg 217
            |||||||| |||||||||||||||
Sbjct: 2152 cgttcagcaccctcttggagttgg 2129
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>emb|AL806515.7| Mouse DNA sequence from clone RP23-434M18 on chromosome X, complete
             sequence
          Length = 125394

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   ccatcctgttcatttccagc 166
             ||||||||||||||||||||
Sbjct: 22962 ccatcctgttcatttccagc 22943
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>emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, complete sequence
          Length = 177248

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    tctaggcataaacaacaaac 323
              ||||||||||||||||||||
Sbjct: 115568 tctaggcataaacaacaaac 115587
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>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
              complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 336    catatgcctgaatagactcc 355
              ||||||||||||||||||||
Sbjct: 140238 catatgcctgaatagactcc 140257
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>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence
          Length = 168119

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     atgatcacatgaaacttcca 116
              ||||||||||||||||||||
Sbjct: 159834 atgatcacatgaaacttcca 159815
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>gb|AF175768.1|AF175768 Dictyostelium discoideum SAPLIP C protein mRNA, complete cds
          Length = 521

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 514 tttggttcatcatctcaaga 533
           ||||||||||||||||||||
Sbjct: 367 tttggttcatcatctcaaga 386
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>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete
             sequence
          Length = 203022

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   agactccttgaagctcatctctga 372
             ||||||| ||||||||||||||||
Sbjct: 81786 agactccatgaagctcatctctga 81809
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>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence
          Length = 196521

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     atgatcacatgaaacttcca 116
              ||||||||||||||||||||
Sbjct: 167589 atgatcacatgaaacttcca 167608
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>emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chromosome 2, complete
              sequence
          Length = 228870

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    gtaagagacacagaactcca 192
              ||||||||||||||||||||
Sbjct: 147523 gtaagagacacagaactcca 147504


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,834,800
Number of Sequences: 3902068
Number of extensions: 5834800
Number of successful extensions: 100681
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100510
Number of HSP's gapped (non-prelim): 159
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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