>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA,
            complete cds
          Length = 1067

 Score =  139 bits (70), Expect = 5e-30
 Identities = 96/104 (92%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                        
Query: 6    tgttcttattgaatcgcataaggaaactcaactgaagaattctcaaaccccaacaacttc 65
            |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 1039 tgttcttattgaatcgcataaggaaactcaactgaaaaattctcaaaccccaccaacttc 980

                                                        
Query: 66   acaacatcacattatattacagatagagaagcatgcatcatcca 109
            |||||||||||||   ||||||||| || | |||||||||||||
Sbjct: 979  acaacatcacatt---ttacagataaaggaacatgcatcatcca 939



 Score =  113 bits (57), Expect = 3e-22
 Identities = 136/163 (83%), Gaps = 17/163 (10%)
 Strand = Plus / Minus

                                                                       
Query: 129 gcttcgatctgaaccaaacaacatgacgttcttcacatcatcgagacatt-------ctg 181
           ||||||||||||||||||||||| || ||||||||||||||||| |||||       |||
Sbjct: 932 gcttcgatctgaaccaaacaacaggatgttcttcacatcatcgaaacattcgtgagactg 873

                                                                       
Query: 182 accaccacgcacgcacttttttatgttgccgaaggcatcatggaaaccaaacaccgaacg 241
            |||||||| |||||| ||||||||||||||||||||| ||||         ||||||||
Sbjct: 872 cccaccacgtacgcac-tttttatgttgccgaaggcattatgg---------accgaacg 823

                                                      
Query: 242 acccttcacatggatggcttagtagtcgttgctggcgacgggg 284
           || |||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 822 actcttcccatggctggcttagtagtcgttgccggcgacgggg 780

>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA,
           complete cds
          Length = 817

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 256 tggcttagtagtcgttgctggcgacgg 282
           |||||||||||||||||| ||||||||
Sbjct: 806 tggcttagtagtcgttgccggcgacgg 780

>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA,
           complete cds
          Length = 829

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 258 gcttagtagtcgttgctggcgacgg 282
           |||||||||||||||| ||||||||
Sbjct: 800 gcttagtagtcgttgccggcgacgg 776

>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7,
             complete sequence
          Length = 168673

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    ttcacaacatcacattatatt 83
             |||||||||||||||||||||
Sbjct: 78807 ttcacaacatcacattatatt 78827

>ref|XM_236362.3| PREDICTED: Rattus norvegicus hect (homologous to the E6-AP (UBE3A)
             carboxyl terminus) domain and RCC1 (CHC1)-like domain
             (RLD) 1 (predicted) (Herc1_predicted), mRNA
          Length = 15132

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 6     tgttcttattgaatcgcataaggaaactc 34
             ||||||||||||  |||||||||||||||
Sbjct: 10797 tgttcttattgatgcgcataaggaaactc 10825

>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete
             sequence
          Length = 191162

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ggaaactcaactgaagaatt 46
             ||||||||||||||||||||
Sbjct: 13923 ggaaactcaactgaagaatt 13942

>ref|NM_020416.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit
            B (PR 52), gamma isoform (PPP2R2C), transcript variant 1,
            mRNA
          Length = 4117

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aaaccccaacaacttcacaa 69
            ||||||||||||||||||||
Sbjct: 3856 aaaccccaacaacttcacaa 3837

>ref|NM_181876.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit
            B (PR 52), gamma isoform (PPP2R2C), transcript variant 2,
            mRNA
          Length = 4087

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aaaccccaacaacttcacaa 69
            ||||||||||||||||||||
Sbjct: 3826 aaaccccaacaacttcacaa 3807

>gb|AC121551.11| Mus musculus chromosome 1, clone RP24-144H23, complete sequence
          Length = 168683

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ggaaactcaactgaagaatt 46
              ||||||||||||||||||||
Sbjct: 136133 ggaaactcaactgaagaatt 136114

>gb|AC147922.2| Xenopus tropicalis clone CH216-98P3, complete sequence
          Length = 171597

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttcttattgaatcgcataag 27
             ||||||||||||||||||||
Sbjct: 92152 ttcttattgaatcgcataag 92171

>gb|AC006012.2| Homo sapiens PAC clone RP5-942I16 from 7, complete sequence
          Length = 121598

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggcatcatggaaaccaaaca 234
              ||||||||||||||||||||
Sbjct: 113843 ggcatcatggaaaccaaaca 113824

>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence
          Length = 212735

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aaaccccaacaacttcacaa 69
             ||||||||||||||||||||
Sbjct: 57462 aaaccccaacaacttcacaa 57481

>gb|BC021735.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory
           subunit B (PR 52), gamma isoform, mRNA (cDNA clone
           IMAGE:4816112)
          Length = 1172

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aaaccccaacaacttcacaa 69
           ||||||||||||||||||||
Sbjct: 918 aaaccccaacaacttcacaa 899

>gb|BC045682.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit
            B (PR 52), gamma isoform, mRNA (cDNA clone IMAGE:5300526)
          Length = 2161

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aaaccccaacaacttcacaa 69
            ||||||||||||||||||||
Sbjct: 1900 aaaccccaacaacttcacaa 1881

>dbj|AK127386.1| Homo sapiens cDNA FLJ45468 fis, clone BRSTN2015788
          Length = 1737

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aaaccccaacaacttcacaa 69
            ||||||||||||||||||||
Sbjct: 1499 aaaccccaacaacttcacaa 1480

>gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, complete sequence
          Length = 191656

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 46     tctcaaaccccaacaacttcacaa 69
              ||||||||||||||| ||||||||
Sbjct: 107696 tctcaaaccccaacaccttcacaa 107719

>gb|AC073589.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-147E23, complete
              sequence
          Length = 222430

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    tctgaaccaaacaacatgac 155
              ||||||||||||||||||||
Sbjct: 111593 tctgaaccaaacaacatgac 111574

>gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-367K14, complete
             sequence
          Length = 108667

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aaaccccaacaacttcacaa 69
             ||||||||||||||||||||
Sbjct: 32732 aaaccccaacaacttcacaa 32713

>gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, complete sequence
          Length = 160943

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aaaccccaacaacttcacaa 69
             ||||||||||||||||||||
Sbjct: 82311 aaaccccaacaacttcacaa 82330

>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     tctgaaccaaacaacatgac 155
               ||||||||||||||||||||
Sbjct: 1893522 tctgaaccaaacaacatgac 1893503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,642,448
Number of Sequences: 3902068
Number of extensions: 2642448
Number of successful extensions: 47035
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46986
Number of HSP's gapped (non-prelim): 47
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)