>RDRP_PVXX3 (P17779) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = -2

Query: 510 ARQVAEFFEFVKKKNEALPAETSDGDKSISPQVMLPG----RGDLWFPGGSPLP 361
           A+++AE  E ++ + EA P ETS G  +I     LPG    R +L  P   P+P
Sbjct: 527 AKRLAEIQESMRAEGEAEPNETSGGMGAIPSNAELPGTSDARQELTLPTTKPVP 580

>ATPG_PROMM (Q7V5S8) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 316

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 317 DDIARLNSRDPRADFGKGLPPGNHKSPLPGSI 412
           D+I RL ++D R    KG+ P N + PLP  I
Sbjct: 205 DEIFRLTTKDSRLTVEKGVGPANEQPPLPSDI 236

>TES_CALMO (Q2QLC3) Testin|
          Length = 421

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -2

Query: 507 RQVAEFFEFVKK-KNEALPAETSDGDKSISPQVMLPGRGDLWFPGGSPLPKSALGSLEFR 331
           R+V E  +FVKK K+EAL      GD  +  ++   G   ++ PGG      A+G++E +
Sbjct: 170 REVKEMEQFVKKYKSEALGV----GDVKLPCEMDAQGPKQMYIPGGDRSTLPAMGAMEDK 225

Query: 330 RA 325
            A
Sbjct: 226 SA 227

>GPA1_ORYSA (P49083) Guanine nucleotide-binding protein alpha-1 subunit|
           (GP-alpha-1) (Protein Dwarf1)
          Length = 380

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = -2

Query: 627 VFFLEGDHMHSSIQKVPALILDCENDIDFNKDIEAKQQYARQVAEFFEFVKKKNEALPAE 448
           +F  + D     IQKVP  +  CE   D+      KQ+    V   +EFVKKK E L  +
Sbjct: 285 LFLNKFDIFEKKIQKVPLSV--CEWFKDYQPIAPGKQE----VEHAYEFVKKKFEELYFQ 338

Query: 447 TSDGDK 430
           +S  D+
Sbjct: 339 SSKPDR 344

>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)|
          Length = 1007

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +3

Query: 612  LPGRTLDLVFLDVVSPPCELEAD*LTTNQSLVLW 713
            L  R  D VF+D  SPP   +   LT N SL LW
Sbjct: 921  LEPREADCVFIDASSPPSPRDEIFLTPNLSLPLW 954

>ZIP2_ARATH (Q9LTH9) Zinc transporter 2 precursor (ZRT/IRT-like protein 2)|
          Length = 353

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -3

Query: 257 WWYIVKSGWSLDQSSHPSLRSTTPNWRRPSECCIISKPRYSFLSVVLGNAV 105
           W Y +  G +     + ++        +P E C   KP Y F++V LG A+
Sbjct: 295 WTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVAL 345

>NOR_FUSOX (P23295) Cytochrome P450 55A1 (EC 1.14.-.-) (CYPLVA1) (P450 DNIR)|
           (Nitric-oxide reductase) (P450nor)
          Length = 402

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
 Frame = +3

Query: 252 PPCHGHKMMVASVMFAPTLGARTTSPV*IQET----LEQILVKGCLQGTTNHLCQEA*PV 419
           PP H H+  +    F P    +   P  IQ T    LEQ+  KGC  G  + + + A PV
Sbjct: 90  PPEHMHQRSMVEPTFTPE-AVKNLQPY-IQRTVDDLLEQMKQKGCANGPVDLVKEFALPV 147

Query: 420 GLYSCH----------HHLSQQEELRSFSSQIQRTPQLA 506
             Y  +           +L+QQ  +R+  S   R    A
Sbjct: 148 PSYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAA 186

>Y1538_METJA (Q58933) Hypothetical protein MJ1538|
          Length = 252

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 579 PALILDCENDIDFNKDIEAKQQYARQVAEFFEFVKKKNE 463
           P LI+D   DIDFN+  +   + ++++ +F+   + KN+
Sbjct: 148 PFLIIDTTKDIDFNEIAKKLIEKSKEIPKFYVLEENKNK 186

>CP3AG_MOUSE (Q64481) Cytochrome P450 3A16 (EC 1.14.14.1) (CYPIIIA16)|
          Length = 504

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 342 ETLEQILVKGCLQGTTNHLCQEA*PVGLYSCHHHLSQQEELRSFSSQIQRT 494
           ET++ +LVK C    TN   Q+  PVG+ S    L++ EE + + + +  T
Sbjct: 88  ETIKNVLVKECFSVFTNR--QDFFPVGIMSKSISLAKDEEWKRYRALLSPT 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,175,724
Number of Sequences: 219361
Number of extensions: 2364137
Number of successful extensions: 5999
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5996
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)