ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3f22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AA2AR_CANFA (P11617) Adenosine A2a receptor 35 0.15
2AA2AR_HORSE (Q6TLI7) Adenosine A2a receptor 34 0.33
3SYFA_NITOC (Q3JBZ8) Phenylalanyl-tRNA synthetase alpha chain (EC... 31 2.2
4PAQR6_HUMAN (Q6TCH4) Progestin and adipoQ receptor family member... 31 2.8
5AA2AR_RAT (P30543) Adenosine A2a receptor 30 4.8
6AA2AR_MOUSE (Q60613) Adenosine A2a receptor 30 4.8
7SYFA_LACJO (Q74IE1) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 6.3
8SYFA_LACAC (Q5FIY6) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 6.3
9SYFA_LEGPL (Q5WT86) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 6.3
10SYFA_LEGPA (Q5X1H7) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 6.3
11SYFA_LEGPH (Q5ZS08) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 6.3

>AA2AR_CANFA (P11617) Adenosine A2a receptor|
          Length = 412

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +1

Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462
           L+Y  +V+    S+V+P  Y   +   +Q  R+II  H LRR EP  +  TS R +    
Sbjct: 269 LMYLTIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRRREPFKAGGTSARALAAHG 328

Query: 463 STSDWLKLR 489
           S  + + LR
Sbjct: 329 SDGEQISLR 337



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>AA2AR_HORSE (Q6TLI7) Adenosine A2a receptor|
          Length = 412

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +1

Query: 229 IKCVLLSCLKTPFLVSYSLLIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLR 405
           I C    C + P    +  L+Y  +++    S+V+P  Y   +   +    +II  H LR
Sbjct: 252 INCFTFFCPECPHAPLW--LMYPAIILSHFNSVVNPFIYAYRIREFRHTFHKIIRSHILR 309

Query: 406 REEPC*SKDTSHRRILCSSSTSDWLKLR 489
           R+EP  +  TS R +    S ++ + LR
Sbjct: 310 RQEPFKAGGTSARALAAHGSDAEQVSLR 337



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>SYFA_NITOC (Q3JBZ8) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 352

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422
           P YF  T   A T++ C +C+G  C +C  T
Sbjct: 259 PSYFPFTEPSAETDIQCVNCSGEGCRVCGHT 289



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>PAQR6_HUMAN (Q6TCH4) Progestin and adipoQ receptor family member 6 (Progestin|
           and adipoQ receptor family member VI)
          Length = 344

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
 Frame = +3

Query: 195 SFTVKWCVDHVHQMCAPVLPQNSFPC---QL*SSNLQTHGHGFARI-----YCLPFLHDS 350
           S    W   H+HQ   P    NSF C      S  L+    G +++     +  PFL D+
Sbjct: 138 SMPASWLHGHLHQFFVPAAALNSFLCTGLSCYSRFLELESPGLSKVLRTGAFAYPFLFDN 197

Query: 351 SPL 359
            PL
Sbjct: 198 LPL 200



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>AA2AR_RAT (P30543) Adenosine A2a receptor|
          Length = 410

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +1

Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462
           L+Y  +++    S+V+P  Y   +   +Q  R+II  H LRR+EP  +  +S   +   S
Sbjct: 264 LMYLAIILSHSNSVVNPFIYAYRIREFRQTFRKIIRTHVLRRQEPFQAGGSSAWALAAHS 323

Query: 463 STSDWLKLR 489
           +  + + LR
Sbjct: 324 TEGEQVSLR 332



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>AA2AR_MOUSE (Q60613) Adenosine A2a receptor|
          Length = 410

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +1

Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462
           L+Y  +++    S+V+P  Y   +   +Q  R+II  H LRR+EP  +  +S   +   S
Sbjct: 264 LMYLAIILSHSNSVVNPFIYAYRIREFRQTFRKIIRTHVLRRQEPFRAGGSSAWALAAHS 323

Query: 463 STSDWLKLR 489
           +  + + LR
Sbjct: 324 TEGEQVSLR 332



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>SYFA_LACJO (Q74IE1) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 349

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -1

Query: 562 IFSSDKNQVR*TTDCMPDYFATTAVEASTNLMCSSCTGFSCVMCPWTSMV 413
           +F  D+      T   P YF  T      ++ C +C G  C +C +T  +
Sbjct: 241 VFGQDRK-----TRLRPSYFPFTEPSVEMDVSCFNCDGKGCPICKYTGWI 285



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>SYFA_LACAC (Q5FIY6) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 349

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -1

Query: 562 IFSSDKNQVR*TTDCMPDYFATTAVEASTNLMCSSCTGFSCVMCPWTSMV 413
           +F  D+      T   P YF  T      ++ C +C G  C +C +T  +
Sbjct: 241 VFGQDR-----ATRLRPSYFPFTEPSVEMDVSCFNCDGKGCPICKYTGWI 285



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>SYFA_LEGPL (Q5WT86) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 338

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422
           P YF  T   A  ++ C+ C G  C  C +T
Sbjct: 246 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 276



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>SYFA_LEGPA (Q5X1H7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 338

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422
           P YF  T   A  ++ C+ C G  C  C +T
Sbjct: 246 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 276



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>SYFA_LEGPH (Q5ZS08) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 342

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422
           P YF  T   A  ++ C+ C G  C  C +T
Sbjct: 250 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,558,757
Number of Sequences: 219361
Number of extensions: 1497943
Number of successful extensions: 3153
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3153
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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