Clone Name | rbasd3f22 |
---|---|
Clone Library Name | barley_pub |
>AA2AR_CANFA (P11617) Adenosine A2a receptor| Length = 412 Score = 35.0 bits (79), Expect = 0.15 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +1 Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462 L+Y +V+ S+V+P Y + +Q R+II H LRR EP + TS R + Sbjct: 269 LMYLTIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRRREPFKAGGTSARALAAHG 328 Query: 463 STSDWLKLR 489 S + + LR Sbjct: 329 SDGEQISLR 337
>AA2AR_HORSE (Q6TLI7) Adenosine A2a receptor| Length = 412 Score = 33.9 bits (76), Expect = 0.33 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = +1 Query: 229 IKCVLLSCLKTPFLVSYSLLIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLR 405 I C C + P + L+Y +++ S+V+P Y + + +II H LR Sbjct: 252 INCFTFFCPECPHAPLW--LMYPAIILSHFNSVVNPFIYAYRIREFRHTFHKIIRSHILR 309 Query: 406 REEPC*SKDTSHRRILCSSSTSDWLKLR 489 R+EP + TS R + S ++ + LR Sbjct: 310 RQEPFKAGGTSARALAAHGSDAEQVSLR 337
>SYFA_NITOC (Q3JBZ8) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 352 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422 P YF T A T++ C +C+G C +C T Sbjct: 259 PSYFPFTEPSAETDIQCVNCSGEGCRVCGHT 289
>PAQR6_HUMAN (Q6TCH4) Progestin and adipoQ receptor family member 6 (Progestin| and adipoQ receptor family member VI) Length = 344 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Frame = +3 Query: 195 SFTVKWCVDHVHQMCAPVLPQNSFPC---QL*SSNLQTHGHGFARI-----YCLPFLHDS 350 S W H+HQ P NSF C S L+ G +++ + PFL D+ Sbjct: 138 SMPASWLHGHLHQFFVPAAALNSFLCTGLSCYSRFLELESPGLSKVLRTGAFAYPFLFDN 197 Query: 351 SPL 359 PL Sbjct: 198 LPL 200
>AA2AR_RAT (P30543) Adenosine A2a receptor| Length = 410 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462 L+Y +++ S+V+P Y + +Q R+II H LRR+EP + +S + S Sbjct: 264 LMYLAIILSHSNSVVNPFIYAYRIREFRQTFRKIIRTHVLRRQEPFQAGGSSAWALAAHS 323 Query: 463 STSDWLKLR 489 + + + LR Sbjct: 324 TEGEQVSLR 332
>AA2AR_MOUSE (Q60613) Adenosine A2a receptor| Length = 410 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 286 LIYRLMVMGSLASIVSPS-YMILLLCSKQVNREIIFKHCLRREEPC*SKDTSHRRILCSS 462 L+Y +++ S+V+P Y + +Q R+II H LRR+EP + +S + S Sbjct: 264 LMYLAIILSHSNSVVNPFIYAYRIREFRQTFRKIIRTHVLRRQEPFRAGGSSAWALAAHS 323 Query: 463 STSDWLKLR 489 + + + LR Sbjct: 324 TEGEQVSLR 332
>SYFA_LACJO (Q74IE1) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 349 Score = 29.6 bits (65), Expect = 6.3 Identities = 13/50 (26%), Positives = 21/50 (42%) Frame = -1 Query: 562 IFSSDKNQVR*TTDCMPDYFATTAVEASTNLMCSSCTGFSCVMCPWTSMV 413 +F D+ T P YF T ++ C +C G C +C +T + Sbjct: 241 VFGQDRK-----TRLRPSYFPFTEPSVEMDVSCFNCDGKGCPICKYTGWI 285
>SYFA_LACAC (Q5FIY6) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 349 Score = 29.6 bits (65), Expect = 6.3 Identities = 13/50 (26%), Positives = 21/50 (42%) Frame = -1 Query: 562 IFSSDKNQVR*TTDCMPDYFATTAVEASTNLMCSSCTGFSCVMCPWTSMV 413 +F D+ T P YF T ++ C +C G C +C +T + Sbjct: 241 VFGQDR-----ATRLRPSYFPFTEPSVEMDVSCFNCDGKGCPICKYTGWI 285
>SYFA_LEGPL (Q5WT86) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -1 Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422 P YF T A ++ C+ C G C C +T Sbjct: 246 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 276
>SYFA_LEGPA (Q5X1H7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -1 Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422 P YF T A ++ C+ C G C C +T Sbjct: 246 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 276
>SYFA_LEGPH (Q5ZS08) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 342 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -1 Query: 514 PDYFATTAVEASTNLMCSSCTGFSCVMCPWT 422 P YF T A ++ C+ C G C C +T Sbjct: 250 PSYFPFTEPSAEVDIECTQCNGKGCRSCKFT 280 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,558,757 Number of Sequences: 219361 Number of extensions: 1497943 Number of successful extensions: 3153 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3077 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3153 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)