>gb|AC168218.1| Mus musculus BAC clone RP24-236K20 from chromosome 9, complete sequence
          Length = 168791

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 264   tttccttgtcagttatagtctt 285
             ||||||||||||||||||||||
Sbjct: 55069 tttccttgtcagttatagtctt 55090

>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence
          Length = 185777

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 397    tgtctcaggagagaagaaccat 418
              ||||||||||||||||||||||
Sbjct: 126997 tgtctcaggagagaagaaccat 126976

>gb|AC125688.6| Rattus norvegicus 20 BAC CH230-186I2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 209618

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 244   ctgtcctgcctcaaaactcctttcc 268
             ||||||||| |||||||||||||||
Sbjct: 98846 ctgtcctgcttcaaaactcctttcc 98822

>gb|AC118606.13| Mus musculus chromosome 5, clone RP24-69F9, complete sequence
          Length = 208384

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 541    gattcttgtcagaactgaata 561
              |||||||||||||||||||||
Sbjct: 138465 gattcttgtcagaactgaata 138445

>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   tcatcaaatgtgtgctcctgt 247
             |||||||||||||||||||||
Sbjct: 97686 tcatcaaatgtgtgctcctgt 97666

>emb|BX569798.16| Zebrafish DNA sequence from clone DKEY-26I13 in linkage group 1, complete
              sequence
          Length = 215607

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    atatatatatttgttcatgct 122
              |||||||||||||||||||||
Sbjct: 165688 atatatatatttgttcatgct 165668

>emb|BX511246.4| Zebrafish DNA sequence from clone DKEY-238D17 in linkage group 23,
             complete sequence
          Length = 84484

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   ttcatggtttttacaatgaaa 187
             |||||||||||||||||||||
Sbjct: 62763 ttcatggtttttacaatgaaa 62783

>gb|AC154845.2| Mus musculus BAC clone RP23-48E18 from chromosome 14, complete sequence
          Length = 211129

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 88     aacattttgatcagatatatatatttgtt 116
              ||||||||||||| |||||||||| ||||
Sbjct: 199377 aacattttgatcaaatatatatatatgtt 199349

>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence
          Length = 160892

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tgaaagaacaagtcatttac 202
             ||||||||||||||||||||
Sbjct: 86332 tgaaagaacaagtcatttac 86313

>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tgaaagaacaagtcatttac 202
             ||||||||||||||||||||
Sbjct: 18188 tgaaagaacaagtcatttac 18169

>emb|AL732308.7| Human DNA sequence from clone RP11-199F23 on chromosome X, complete
             sequence
          Length = 90406

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   gagaaataatcttcaaacat 396
             ||||||||||||||||||||
Sbjct: 66504 gagaaataatcttcaaacat 66523

>emb|AL591022.6| Human DNA sequence from clone RP13-485J5 on chromosome Xq27.3-28,
             complete sequence
          Length = 89747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   gaaagaacaagtcatttaca 203
             ||||||||||||||||||||
Sbjct: 57619 gaaagaacaagtcatttaca 57638

>emb|AL158167.15| Human DNA sequence from clone RP11-534G20 on chromosome 10 Contains two
              novel genes and the 3' end of the SVIL gene for supervillin
              (archvillin) and a CpG island, complete sequence
          Length = 227744

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    agatatatatatttgttcat 119
              ||||||||||||||||||||
Sbjct: 213900 agatatatatatttgttcat 213919

>emb|AL160010.14| Human DNA sequence from clone RP11-146P20 on chromosome 10 Contains part
              of the gene for VPS10 domain receptor protein SORCS 1,
              complete sequence
          Length = 158724

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    tgaaagaacaagtcatttac 202
              ||||||||||||||||||||
Sbjct: 119070 tgaaagaacaagtcatttac 119089

>gb|AY129950.1| Homo sapiens cAMP-specific phosphodiesterase 8B (PDE8B) gene,
             alternatively spliced, complete cds
          Length = 216589

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   tggatcatgttcatcaaatgtgtg 240
             |||||||||||||||||| |||||
Sbjct: 28829 tggatcatgttcatcaaaagtgtg 28806

>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence
          Length = 163816

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   agatatatatatttgttcat 119
             ||||||||||||||||||||
Sbjct: 90414 agatatatatatttgttcat 90433

>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161577

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ctcttcatggtttttacaat 183
              ||||||||||||||||||||
Sbjct: 110482 ctcttcatggtttttacaat 110501

>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 191715

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   ttgattcttgtcagaactga 558
             ||||||||||||||||||||
Sbjct: 66965 ttgattcttgtcagaactga 66946

>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8,
              complete sequence
          Length = 218866

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tatatatatttgttcatgct 122
              ||||||||||||||||||||
Sbjct: 133675 tatatatatttgttcatgct 133694

>dbj|AK143284.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230030J04
            product:unclassifiable, full insert sequence
          Length = 5624

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  tcaggagagaagaaccatgc 420
            ||||||||||||||||||||
Sbjct: 5138 tcaggagagaagaaccatgc 5119

>emb|AL928725.18| Zebrafish DNA sequence from clone CH211-13O20 in linkage group 23,
              complete sequence
          Length = 199910

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     tttgatcagatatatatatttgtt 116
              |||||||| |||||||||||||||
Sbjct: 162293 tttgatcaaatatatatatttgtt 162270

>gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, complete sequence
          Length = 128811

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   tggatcatgttcatcaaatgtgtg 240
             |||||||||||||||||| |||||
Sbjct: 60263 tggatcatgttcatcaaaagtgtg 60286

>gb|AC073575.30| Homo sapiens 12 PAC RP1-267L14 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 173718

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 90     cattttgatcagatatatatattt 113
              |||| |||||||||||||||||||
Sbjct: 116921 cattatgatcagatatatatattt 116898

>gb|AF220294.1|AF220294 Mus musculus clone BAC126c8 Rsp29-like protein (Rsp29) and Als splice
              variant 2 (Als) genes, partial cds; Als splice variant 1
              (Als), TCE2 (Tce2), NDK3-like protein (Ndk3), and TCE4
              (Tce4) genes, complete cds; and TCE5 (Tce5) gene, partial
              cds
          Length = 175759

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    tcaggagagaagaaccatgc 420
              ||||||||||||||||||||
Sbjct: 124666 tcaggagagaagaaccatgc 124685

>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7,
              complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    tatatatatttgttcatgct 122
              ||||||||||||||||||||
Sbjct: 130502 tatatatatttgttcatgct 130483

>emb|CT574562.2| Pan troglodytes chromosome X clone PTB-067L19 map Xq28, complete sequence
          Length = 137502

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gaaagaacaagtcatttaca 203
              ||||||||||||||||||||
Sbjct: 135160 gaaagaacaagtcatttaca 135179

>emb|CT574567.3| Pan troglodytes chromosome X clone PTB-059K09 map Xq28, complete
             sequence
          Length = 163464

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   gaaagaacaagtcatttaca 203
             ||||||||||||||||||||
Sbjct: 72458 gaaagaacaagtcatttaca 72477

>emb|BX005274.11| Zebrafish DNA sequence from clone DKEY-77B9 in linkage group 19, complete
              sequence
          Length = 165012

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    ttcatgcttaccaaactactgtat 138
              |||||||| |||||||||||||||
Sbjct: 120953 ttcatgctgaccaaactactgtat 120976

>emb|BX005136.8| Mouse DNA sequence from clone RP23-449C14 on chromosome 2, complete
              sequence
          Length = 178200

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    agagaagaaccatgctagtc 425
              ||||||||||||||||||||
Sbjct: 126595 agagaagaaccatgctagtc 126614

>emb|AL953904.10| Zebrafish DNA sequence from clone CH211-266I6, complete sequence
          Length = 166088

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gtttttacaatgaaagaaca 192
             ||||||||||||||||||||
Sbjct: 17730 gtttttacaatgaaagaaca 17749

>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     atcagatatatatatttgtt 116
              ||||||||||||||||||||
Sbjct: 133100 atcagatatatatatttgtt 133119

>gb|AC154229.1| Mus musculus BAC clone RP24-155I8 from 17, complete sequence
          Length = 159982

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   tcaggagagaagaaccatgc 420
             ||||||||||||||||||||
Sbjct: 93635 tcaggagagaagaaccatgc 93654

>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 254    tcaaaactcctttccttgtcagtt 277
              ||||||||||||| ||||||||||
Sbjct: 546750 tcaaaactccttttcttgtcagtt 546773

>emb|Z82255.1|HSU75A4 Human DNA sequence from clone LL0XNC01-75A4 on chromosome X, complete
            sequence
          Length = 39132

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gagaaataatcttcaaacat 396
            ||||||||||||||||||||
Sbjct: 1679 gagaaataatcttcaaacat 1698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,903,364
Number of Sequences: 3902068
Number of extensions: 5903364
Number of successful extensions: 118253
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118177
Number of HSP's gapped (non-prelim): 76
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)