Clone Name | rbasd3f20 |
---|---|
Clone Library Name | barley_pub |
>gb|AY162186.1| Triticum monococcum extracellular invertase (exin1) mRNA, complete cds Length = 2279 Score = 505 bits (255), Expect = e-140 Identities = 316/335 (94%), Gaps = 1/335 (0%) Strand = Plus / Minus Query: 311 ccatccatccaccgagcgaaaacccagctcccgaatcctaataggcttgagctccgctca 370 |||||| ||||||| |||||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 1860 ccatccgtccaccgtgcgaaaacccagctccgaaatcctaataggcttgagccctgctca 1801 Query: 371 ccgagctcgccgcgatcagcccgtcggggagcacgttcacggtcgccgtcgccatctccc 430 |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 1800 ccgagctcgccgcgatcagctcgtcggggaggacgttcacggtcgccgtggccatctccc 1741 Query: 431 acgcgtcgaggctggacaccttgacggcgccggtgcccgttgttgaacacgtacaggtgg 490 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1740 acgcgtcgaggctggacaccttgacggcgccggtgcc-gttgttgaacacgtacaggtgg 1682 Query: 491 ctgttgccgttcacgacgtggtccgggtacaccctcgccgtgatgcacgtcctgccgccg 550 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1681 ctgttgccgttcacgacgtggtccgggtacaccctcgccgtgatgcacgcccggccgccg 1622 Query: 551 ccgccgaagctctccaccaccgagtggtcgaccagtgttctgagcgagatgctgccccct 610 ||||||||||||||||||||||||||||| ||||| |||||||| |||||| | || || Sbjct: 1621 ccgccgaagctctccaccaccgagtggtcaaccagcgttctgagggagatgatcccgccg 1562 Query: 611 tgcgcctcgatgtccatgtccacgaaggccccgta 645 ||||||||||||||||||||||||||||||||||| Sbjct: 1561 tgcgcctcgatgtccatgtccacgaaggccccgta 1527 Score = 220 bits (111), Expect = 4e-54 Identities = 159/176 (90%), Gaps = 8/176 (4%) Strand = Plus / Minus Query: 154 aacacctaaacacaaatattcctacaatctttttcctttgcagcatcctagaatcctcct 213 |||||||| |||||||| ||| || |||||||||||||||||||||||||||||||| || Sbjct: 2037 aacacctagacacaaatcttcttagaatctttttcctttgcagcatcctagaatccttct 1978 Query: 214 tctgtgctgttctggcaaac--------aatgagggagcctccatttgtacacctgagcc 265 |||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 1977 tctgtgctgttccgagaaacaatgactcaatgagggagcctccatttgtacacctgagcc 1918 Query: 266 acaattgggcaggcaaatccaatcggccgtagaaattcacaatggccatccatcca 321 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1917 acaattgggcaggcaaatccaatcggccgtggaaattcacaatggccatccatcca 1862 Score = 73.8 bits (37), Expect = 6e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Minus Query: 27 atacttttacatgacacccgttttcaccttggaaatacactc-taaactgatgcc-aacg 84 |||| |||||| ||| |||||||||||||||||||||||||| ||| ||||||| || Sbjct: 2201 atacatttacaggacgcccgttttcaccttggaaatacactcttaatttgatgccaaata 2142 Query: 85 cccatcatgcagggcatgcgtgcta 109 |||| |||||||||||||||||||| Sbjct: 2141 cccaacatgcagggcatgcgtgcta 2117
>ref|XM_450319.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2098 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 1843 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1784 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 1783 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 1725 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 1724 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 1668 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 1633 tcgatgtccatgtccacgaa 1614
>gb|AY575555.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 8 mRNA, partial cds Length = 348 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 217 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 158 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 157 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 99 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 98 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 42
>gb|AY578164.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 7 mRNA, complete cds Length = 2076 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 1821 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1762 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 1761 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 1703 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 1702 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 1646 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 1611 tcgatgtccatgtccacgaa 1592
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 4116475 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 4116416 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 4116415 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 4116357 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 4116356 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 4116300 Score = 121 bits (61), Expect = 3e-24 Identities = 149/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| ||| || || Sbjct: 4144369 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 4144310 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 4144309 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 4144251 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 4144250 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 4144194 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gccgccgccgccgaagctct 563 |||||||||||||||||||| Sbjct: 14907227 gccgccgccgccgaagctct 14907246 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 4116175 tcgatgtccatgtccacgaa 4116156
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 99956 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 99897 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 99896 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 99838 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 99837 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 99781 Score = 121 bits (61), Expect = 3e-24 Identities = 149/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| ||| || || Sbjct: 127850 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 127791 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 127790 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 127732 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 127731 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 127675 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 99656 tcgatgtccatgtccacgaa 99637
>dbj|AK069080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I08, full insert sequence Length = 2101 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 1846 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1787 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 1786 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 1728 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 1727 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 1671 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 1636 tcgatgtccatgtccacgaa 1617
>gb|AF155121.1|AF155121 Oryza sativa subsp. indica apoplastic invertase (INV1) gene, complete cds Length = 7783 Score = 129 bits (65), Expect = 1e-26 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| |||||| || Sbjct: 6930 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttcacggcgtcg 6871 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 6870 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 6812 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 6811 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 6755 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcgatgtccatgtccacgaa 636 |||||||||||||||||||| Sbjct: 6645 tcgatgtccatgtccacgaa 6626
>gb|AY578165.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 8 pseudogene mRNA, complete sequence Length = 1353 Score = 121 bits (61), Expect = 3e-24 Identities = 149/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 403 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 462 ||||| |||||||||||||||| |||||||| || || ||| |||||| ||| || || Sbjct: 1283 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 1224 Query: 463 gtgcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacac 522 | |||||||||||||||||||| |||||| ||| || | ||||| |||||||| || Sbjct: 1223 ct-cccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaac 1165 Query: 523 cctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtc 579 || |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 1164 ccgcgccgtgatgcacgcccgcccgccgccgccgaagctctccaccaccgaatggtc 1108
>gb|AY575552.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 5 mRNA, partial cds Length = 506 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 346 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 287 Query: 573 agtggtcgaccagtgttct 591 | |||||| ||| ||||| Sbjct: 286 accggtcgatcagagttct 268
>gb|AY578161.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 4 mRNA, complete cds Length = 2042 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1707 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 1648 Query: 573 agtggtcgaccagtgttct 591 | |||||| ||| ||||| Sbjct: 1647 accggtcgatcagagttct 1629
>dbj|AB154521.1| Oryza sativa (japonica cultivar-group) OsCIN4 mRNA for cell wall invertase, complete cds Length = 2068 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1701 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 1642 Query: 573 agtggtcgaccagtgttct 591 | |||||| ||| ||||| Sbjct: 1641 accggtcgatcagagttct 1623
>dbj|AK067444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F12, full insert sequence Length = 2100 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1765 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 1706 Query: 573 agtggtcgaccagtgttct 591 | |||||| ||| ||||| Sbjct: 1705 accggtcgatcagagttct 1687
>dbj|AK061744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F09, full insert sequence Length = 1318 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 969 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 910 Query: 573 agtggtcgaccagtgttct 591 | |||||| ||| ||||| Sbjct: 909 accggtcgatcagagttct 891
>ref|NM_189408.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1267 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 1208 Query: 573 a 573 | Sbjct: 1207 a 1207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 42622375 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 42622316 Query: 573 a 573 | Sbjct: 42622315 a 42622315
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 513 ccgggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccg 572 |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 143258 ccgggtacactctggccatgatgcacgccctgccgccgccgccgaagctctccaccgccg 143199 Query: 573 a 573 | Sbjct: 143198 a 143198
>gb|AY111968.1| Zea mays CL1139_-3 mRNA sequence Length = 2057 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 515 gggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgag 574 ||||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1756 gggtacaccctcgtcaggatgcacgtcctgccgcccgcgccgaagctctccaccacggag 1697 Query: 575 tggtcgaccagtgt 588 | |||| |||||| Sbjct: 1696 ggttcgatcagtgt 1683
>gb|AF043728.1|AF043728 Zea mays cell wall invertase Incw3 mRNA, partial cds Length = 217 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 515 gggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgag 574 ||||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 90 gggtacaccctcgtcaggatgcacgtcctgccgcccgcgccgaagctctccaccacggag 31 Query: 575 tggtcgaccagtgt 588 | |||| |||||| Sbjct: 30 ggttcgatcagtgt 17
>gb|AF043346.1|AF043346 Zea mays cell wall invertase (incw3) gene, complete cds Length = 6997 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 515 gggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccac 570 ||||||||||||| | |||||||||||||||||| ||||||||||||||||||| Sbjct: 4400 gggtacaccctcgtcaggatgcacgtcctgccgcccgcgccgaagctctccaccac 4345
>ref|XM_474246.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1545 Score = 69.9 bits (35), Expect = 1e-08 Identities = 159/199 (79%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 405 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 464 ||||||||||||||| |||||||||||||| ||||| ||||||| || || | ||| | Sbjct: 1509 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctg- 1451 Query: 465 gcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccc 524 ||| |||||||||||||||||||| ||| ||| | | |||| || ||||| |||| Sbjct: 1450 acccattgttgaacacgtacaggtgactgctgcttgttgctgcgtgctcagggtataccc 1391 Query: 525 tcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtcgacca 584 | |||||||||| | ||| ||||| ||||||||||| | || ||||||||| | || Sbjct: 1390 gggttgtgatgcacgctcggccaccgcctccgaagctctcaatcatcgagtggtcaatca 1331 Query: 585 gtgttctgagcgagatgct 603 |||||||||| || ||||| Sbjct: 1330 gtgttctgagtgatatgct 1312
>gb|AY575553.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 6-like mRNA, partial sequence Length = 506 Score = 69.9 bits (35), Expect = 1e-08 Identities = 159/199 (79%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 405 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 464 ||||||||||||||| |||||||||||||| ||||| ||||||| || || | ||| | Sbjct: 436 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctg- 378 Query: 465 gcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccc 524 ||| |||||||||||||||||||| ||| ||| | | |||| || ||||| |||| Sbjct: 377 acccattgttgaacacgtacaggtgactgctgcttgttgctgcgtgctcagggtataccc 318 Query: 525 tcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtcgacca 584 | |||||||||| | ||| ||||| ||||||||||| | || ||||||||| | || Sbjct: 317 gggttgtgatgcacgctcggccaccgcctccgaagctctcaatcatcgagtggtcaatca 258 Query: 585 gtgttctgagcgagatgct 603 |||||||||| || ||||| Sbjct: 257 gtgttctgagtgatatgct 239
>gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 5 mRNA, complete cds Length = 1731 Score = 69.9 bits (35), Expect = 1e-08 Identities = 159/199 (79%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 405 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 464 ||||||||||||||| |||||||||||||| ||||| ||||||| || || | ||| | Sbjct: 1545 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctg- 1487 Query: 465 gcccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccc 524 ||| |||||||||||||||||||| ||| ||| | | |||| || ||||| |||| Sbjct: 1486 acccattgttgaacacgtacaggtgactgctgcttgttgctgcgtgctcagggtataccc 1427 Query: 525 tcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtggtcgacca 584 | |||||||||| | ||| ||||| ||||||||||| | || ||||||||| | || Sbjct: 1426 gggttgtgatgcacgctcggccaccgcctccgaagctctcaatcatcgagtggtcaatca 1367 Query: 585 gtgttctgagcgagatgct 603 |||||||||| || ||||| Sbjct: 1366 gtgttctgagtgatatgct 1348
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 65.9 bits (33), Expect = 2e-07 Identities = 73/85 (85%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 405 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 464 ||||||||||||||| |||||||||||||| ||||| ||||||| || || | ||| | Sbjct: 28897 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctg- 28955 Query: 465 gcccgttgttgaacacgtacaggtg 489 ||| |||||||||||||||||||| Sbjct: 28956 acccattgttgaacacgtacaggtg 28980 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 470 ttgttgaacacgtacaggtggctg 493 |||||||||||||||||||||||| Sbjct: 25825 ttgttgaacacgtacaggtggctg 25848
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 65.9 bits (33), Expect = 2e-07 Identities = 73/85 (85%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 405 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 464 ||||||||||||||| |||||||||||||| ||||| ||||||| || || | ||| | Sbjct: 33978000 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctg- 33978058 Query: 465 gcccgttgttgaacacgtacaggtg 489 ||| |||||||||||||||||||| Sbjct: 33978059 acccattgttgaacacgtacaggtg 33978083 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 20423648 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 20423590 Query: 573 agtggtcga 581 |||| |||| Sbjct: 20423589 agtgatcga 20423581 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 470 ttgttgaacacgtacaggtggctg 493 |||||||||||||||||||||||| Sbjct: 33974928 ttgttgaacacgtacaggtggctg 33974951
>ref|XM_472408.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1752 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 1632 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 1574 Query: 573 agtggtcga 581 |||| |||| Sbjct: 1573 agtgatcga 1565
>gb|AY342320.1| Oryza sativa (indica cultivar-group) cell wall invertase 3 (CIN3) mRNA, complete cds Length = 1761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 1641 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 1583 Query: 573 agtggtcga 581 |||| |||| Sbjct: 1582 agtgatcga 1574
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 37068 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 37010 Query: 573 agtggtcga 581 |||| |||| Sbjct: 37009 agtgatcga 37001
>gb|AY575550.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 3 mRNA, partial cds Length = 324 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 189 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 131 Query: 573 agtggtcga 581 |||| |||| Sbjct: 130 agtgatcga 122
>gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 3 mRNA, complete cds Length = 1911 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 1668 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 1610 Query: 573 agtggtcga 581 |||| |||| Sbjct: 1609 agtgatcga 1601
>gb|AY220486.1| Oryza sativa (indica cultivar-group) apoplastic invertase (INV4) gene, complete cds Length = 3848 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 3345 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 3287 Query: 573 agtggtcga 581 |||| |||| Sbjct: 3286 agtgatcga 3278
>dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M11, full insert sequence Length = 2289 Score = 58.0 bits (29), Expect = 4e-05 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 514 cgggtacaccctcgccgtgatgcacgtcctgccgc-cgccgccgaagctctccaccaccg 572 |||||||||||||| | |||||||||| |||||| |||| ||||||||||||||||| | Sbjct: 1702 cgggtacaccctcgtcaggatgcacgtcttgccgcgcgcc-ccgaagctctccaccacgg 1644 Query: 573 agtggtcga 581 |||| |||| Sbjct: 1643 agtgatcga 1635
>gb|AF043347.1|AF043347 Zea mays cell wall invertase (incw4) gene, complete cds Length = 5535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 134/168 (79%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 409 acggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggtgccc 468 |||||||||| ||| | |||||| || ||||| ||||||||| || | ||| ||||| Sbjct: 5163 acggtcgccgccgcgagctcccatgcctcgagcttggacacctccaccgtgcctgtgcca 5104 Query: 469 gttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccctcgc 528 |||||||||||| ||| ||||||||||| || | |||| || |||||||| | || Sbjct: 5103 -ttgttgaacacgaacatgtggctgttgctcgtctccgcgtgctcagggtacactcgagc 5045 Query: 529 cgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtg 576 |||||||||| ||| ||| | | ||||||||||||||||||||||| Sbjct: 5044 cgtgatgcacatccgcccgtcagctccgaagctctccaccaccgagtg 4997
>gb|AY110858.1| Zea mays CL1272_1 mRNA sequence Length = 2233 Score = 56.0 bits (28), Expect = 1e-04 Identities = 134/168 (79%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 409 acggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggtgccc 468 |||||||||| ||| | |||||| || ||||| ||||||||| || | ||| ||||| Sbjct: 2010 acggtcgccgccgcgagctcccatgcctcgagcttggacacctccaccgtgcctgtgcca 1951 Query: 469 gttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccctcgc 528 |||||||||||| ||| ||||||||||| || | |||| || |||||||| | || Sbjct: 1950 -ttgttgaacacgaacatgtggctgttgctcgtctccgcgtgctcagggtacactcgagc 1892 Query: 529 cgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtg 576 |||||||||| ||| ||| | | ||||||||||||||||||||||| Sbjct: 1891 cgtgatgcacatccgcccgtcagctccgaagctctccaccaccgagtg 1844
>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds Length = 2319 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 527 gccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 ||||||||||| ||||||| |||| |||||||||||||||| |||| Sbjct: 1745 gccgtgatgcagatcctgccaccgctgccgaagctctccaccgccga 1699
>gb|AF043729.1|AF043729 Zea mays cell wall invertase Incw4 mRNA, partial cds Length = 381 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 470 ttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacaccctcgcc 529 |||||||||||| ||| ||||||||||| || | |||| || |||||||| | ||| Sbjct: 362 ttgttgaacacgaacatgtggctgttgctcgtctccgcgtgctcagggtacactcgagcc 303 Query: 530 gtgatgcacgtcctgccgccgccgccgaagctctccaccaccgagtg 576 ||||||||| ||| ||| | | ||||||||||||||||||||||| Sbjct: 302 gtgatgcacatccgcccgtcagctccgaagctctccaccaccgagtg 256
>emb|AM075205.1| Triticum aestivum mRNA for fructan 6-exohydrolase (6-FEH gene) Length = 1797 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 515 gggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccaccaccgag 574 |||||||||| ||||||||||| |||| ||| || || || ||||| ||||| ||||| Sbjct: 1670 gggtacacccgtgccgtgatgcatgtccggcccccacctccaaagctttccactaccgaa 1611 Query: 575 tggtcgaccagtgttctgagcgagatgctgcccccttgcgcctcgatgtccatgtccac 633 ||||| | || |||||| || || ||| | | ||||||| ||||||||| |||||||| Sbjct: 1610 tggtcaatcaatgttctaagagatatggtcctcccttgctgctcgatgtctatgtccac 1552
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 535 gcacgtcctgccgccgccgccgaagc 560 |||||||||||||||||||||||||| Sbjct: 28362978 gcacgtcctgccgccgccgccgaagc 28363003
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 535 gcacgtcctgccgccgccgccgaagc 560 |||||||||||||||||||||||||| Sbjct: 88541 gcacgtcctgccgccgccgccgaagc 88566
>emb|AJ516025.1|TAE516025 Triticum aestivum mRNA for fructan 1-exohydrolase w1 precursor (1-FEH w1 gene) Length = 2101 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagctctccaccaccgagtggtcgaccagtgttctgag 594 |||||| ||||||||||||||||||||| |||| |||| | ||| |||||||| Sbjct: 1632 cctgccaccgccgccgaagctctccaccgccgaccggtcaatcagagttctgag 1579
>ref|XM_474245.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 ttgttgaacacgtacaggtggctg 493 |||||||||||||||||||||||| Sbjct: 1658 ttgttgaacacgtacaggtggctg 1635
>gb|AY575554.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 7-like mRNA, partial sequence Length = 397 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 ttgttgaacacgtacaggtggctg 493 |||||||||||||||||||||||| Sbjct: 271 ttgttgaacacgtacaggtggctg 248
>gb|AY578163.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 6 mRNA, complete cds Length = 1926 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 ttgttgaacacgtacaggtggctg 493 |||||||||||||||||||||||| Sbjct: 1733 ttgttgaacacgtacaggtggctg 1710
>gb|AY106676.1| Zea mays PCO093097 mRNA sequence Length = 1020 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Minus Query: 521 accctcgccgtgatgcacgtcctgccgccgccgccgaagctctccacc 568 ||||| ||| |||||||| ||||||||| || ||||||||||||||| Sbjct: 748 accctggccatgatgcacaccctgccgcctccaccgaagctctccacc 701
>ref|XM_469625.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1098 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 938 ccgaagctctccaccaccgagtg 916
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 29858768 ccgaagctctccaccaccgagtg 29858746 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcc 565 |||||||||||||||||||| Sbjct: 21622179 cgccgccgccgaagctctcc 21622160 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccgccgccgccgaagctctc 564 |||||||||||||||||||| Sbjct: 21613773 ccgccgccgccgaagctctc 21613754
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 151837 ccgaagctctccaccaccgagtg 151859
>gb|AY302084.1| Saccharum hybrid cultivar cell wall invertase (Shcw1) mRNA, partial cds Length = 1889 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccac 570 |||||||||| |||| || ||||||||||||||||||| Sbjct: 1455 gatgcacgtcttgcctcccgcgccgaagctctccaccac 1417
>gb|AY575551.1| Oryza sativa (indica cultivar-group) cell wall invertase 4 mRNA, partial cds Length = 300 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 109 ccgaagctctccaccaccgagtg 87
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 24709 ccgaagctctccaccaccgagtg 24687
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctctccaccaccgagtg 576 ||||||||||||||||||||||| Sbjct: 29950190 ccgaagctctccaccaccgagtg 29950168 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcc 565 |||||||||||||||||||| Sbjct: 21615208 cgccgccgccgaagctctcc 21615189 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccgccgccgccgaagctctc 564 |||||||||||||||||||| Sbjct: 21606802 ccgccgccgccgaagctctc 21606783
>ref|XM_464363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 544 gccgccgccgccgaagctctccaccaccga 573 |||||||| |||||||||||||||| |||| Sbjct: 96 gccgccgctgccgaagctctccaccgccga 125
>gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, complete sequence Length = 215675 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 tgacacccgttttcaccttggaaata 63 |||||||| ||||||||||||||||| Sbjct: 191026 tgacaccccttttcaccttggaaata 191051
>gb|AY342319.1| Oryza sativa (indica cultivar-group) cell wall invertase 1 (CIN1) mRNA, complete cds Length = 1734 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 1599 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 1558
>gb|AF030421.1| Triticum aestivum cell wall invertase (IVR3) mRNA, partial cds Length = 1563 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagctctccaccaccgagtggtcgaccagtgttctgag 594 |||||| |||||||||||| |||||||| |||| |||| | ||| |||||||| Sbjct: 1257 cctgccaccgccgccgaagttctccaccgccgaccggtcaatcagagttctgag 1204
>gb|AY575548.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 1-like mRNA, partial sequence Length = 528 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 226 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 185
>gb|AC158345.8| Mus musculus chromosome 7, clone RP23-271M19, complete sequence Length = 188354 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 tgacacccgttttcaccttggaaata 63 |||||||| ||||||||||||||||| Sbjct: 130930 tgacaccccttttcaccttggaaata 130905
>gb|AY578158.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 1 mRNA, complete cds Length = 2129 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 1613 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 1572
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 19706116 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 19706075 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 544 gccgccgccgccgaagctctccaccaccga 573 |||||||| |||||||||||||||| |||| Sbjct: 4732051 gccgccgctgccgaagctctccaccgccga 4732080
>dbj|AB089271.1| Triticum aestivum C311 mRNA for fructan exohydrolase, complete cds Length = 2044 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 515 gggtacaccctcgccgtgatgcacgtcctgccgccgccgccgaagctctccacc 568 ||||| || |||||| ||||||| |||||| ||||| ||||||||||||||| Sbjct: 1697 gggtaaactctcgccatgatgcagaccctgccaccgccaccgaagctctccacc 1644
>emb|AJ564996.1|TAE564996 Triticum aestivum mRNA for fructan 1-exohydrolase w3 precursor (1-FEH w3 gene) Length = 2108 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagctctccaccaccgagtggtcgaccagtgttctgag 594 |||||| ||||| ||||||||||||||| |||| |||| | ||| |||||||| Sbjct: 1696 cctgccaccgccaccgaagctctccaccgccgaccggtcaatcagagttctgag 1643
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 544 gccgccgccgccgaagctctccaccaccga 573 |||||||| |||||||||||||||| |||| Sbjct: 12641 gccgccgctgccgaagctctccaccgccga 12670
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 14667 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 14626
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 62874 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 62833
>gb|AE005048.1| Halobacterium sp. NRC-1 section 79 of 170 of the complete genome Length = 10225 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 cgctcaccgagctcgccgcgatcagc 390 ||||| |||||||||||||||||||| Sbjct: 1002 cgctcgccgagctcgccgcgatcagc 1027
>dbj|AK121403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A09, full insert sequence Length = 2103 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 1663 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 1622
>dbj|AB073749.1| Oryza sativa (japonica cultivar-group) OsCIN1 mRNA for cell wall invertase, complete cds Length = 2203 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gatgcacgtcctgccgccgccgccgaagctctccaccaccga 573 |||||| ||| |||| ||| ||||||||||||| |||||||| Sbjct: 1658 gatgcaggtcttgcccccggcgccgaagctctcaaccaccga 1617
>ref|NM_195732.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0073L20.21), mRNA Length = 306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 cgccgccgccgaagctctcca 566 ||||||||||||||||||||| Sbjct: 248 cgccgccgccgaagctctcca 268
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ccgccgaagctctccaccacc 571 ||||||||||||||||||||| Sbjct: 69710 ccgccgaagctctccaccacc 69690
>gb|AC147153.2| Mus musculus chromosome y clone RP24-373C15, complete sequence Length = 147194 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 atcaaaaccttccaacaccta 161 ||||||||||||||||||||| Sbjct: 138903 atcaaaaccttccaacaccta 138923
>ref|XM_754164.1| Ustilago maydis 521 hypothetical protein (UM03110.1) partial mRNA Length = 1521 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 tcgccatctcccacgcgtcgaggct 443 ||||||||||||||| ||||||||| Sbjct: 136 tcgccatctcccacgggtcgaggct 160
>gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, complete sequence Length = 211178 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 tccaacacctaaacacaaata 171 ||||||||||||||||||||| Sbjct: 109259 tccaacacctaaacacaaata 109239
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcgatcagcccgtcggggag 401 ||||||||||||||||||||| Sbjct: 153431 cgcgatcagcccgtcggggag 153411
>emb|AL645544.16| Mouse DNA sequence from clone RP23-327M13 on chromosome 1 Contains the gene for an ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 19 (ALS2CR19), the 3' end of a novel gene and two CpG islands, complete sequence Length = 216046 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 atcaaaaccttccaacaccta 161 ||||||||||||||||||||| Sbjct: 201195 atcaaaaccttccaacaccta 201215
>emb|AL645946.6| Mouse DNA sequence from clone DN-276O13 on chromosome 1 Contains part of the ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 ALS2CR19 (2810455B10RIK 6030439I24RIK 2010002N16RIK), and the 3' end of a novel gene (4930448K12RIK 4930412B09RIK), complete sequence Length = 140936 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 atcaaaaccttccaacaccta 161 ||||||||||||||||||||| Sbjct: 128291 atcaaaaccttccaacaccta 128311
>gb|AC161575.3| Mus musculus chromosome 15, clone RP24-264K6, complete sequence Length = 164213 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 tccaacacctaaacacaaata 171 ||||||||||||||||||||| Sbjct: 109329 tccaacacctaaacacaaata 109309
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete sequence Length = 147651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcca 566 ||||||||||||||||||||| Sbjct: 117020 cgccgccgccgaagctctcca 117000
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcca 566 ||||||||||||||||||||| Sbjct: 8726379 cgccgccgccgaagctctcca 8726359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ccgccgaagctctccaccacc 571 ||||||||||||||||||||| Sbjct: 19265635 ccgccgaagctctccaccacc 19265615
>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ccgccgaagctctccaccacc 571 ||||||||||||||||||||| Sbjct: 299 ccgccgaagctctccaccacc 279
>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ccgccgaagctctccaccacc 571 ||||||||||||||||||||| Sbjct: 299 ccgccgaagctctccaccacc 279
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full insert sequence Length = 1014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ccgccgaagctctccaccacc 571 ||||||||||||||||||||| Sbjct: 115 ccgccgaagctctccaccacc 95
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcca 566 ||||||||||||||||||||| Sbjct: 8731518 cgccgccgccgaagctctcca 8731498
>ref|NM_129125.1| Arabidopsis thaliana DNA binding / transcription factor AT2G35700 mRNA, complete cds Length = 585 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcgccgtcgccatctcccac 432 |||||||||||||||||||| Sbjct: 415 tcgccgtcgccatctcccac 434
>gb|AC162379.2| Mus musculus BAC clone RP23-132A15 from chromosome 12, complete sequence Length = 238126 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gaaatacactctaaactgat 77 |||||||||||||||||||| Sbjct: 216887 gaaatacactctaaactgat 216906
>ref|NM_185700.1| Oryza sativa (japonica cultivar-group), Ozsa8051 predicted mRNA Length = 402 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 135 cctgccgccgccgccgaagc 154
>ref|NM_185690.1| Oryza sativa (japonica cultivar-group), Ozsa8041 predicted mRNA Length = 402 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 135 cctgccgccgccgccgaagc 154
>ref|XM_525839.1| PREDICTED: Pan troglodytes similar to Hypothetical protein MGC11332 (LOC470458), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ccgtgatgcacgtcctgccg 547 |||||||||||||||||||| Sbjct: 889 ccgtgatgcacgtcctgccg 870
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcc 565 |||||||||||||||||||| Sbjct: 127073 cgccgccgccgaagctctcc 127054 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccgccgccgccgaagctctc 564 |||||||||||||||||||| Sbjct: 118667 ccgccgccgccgaagctctc 118648
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 609 cttgcgcctcgatgtccatgtcca 632 |||||||||| ||||||||||||| Sbjct: 894723 cttgcgcctccatgtccatgtcca 894746
>gb|BT014921.1| Drosophila melanogaster GH10588 full insert cDNA Length = 5870 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ctgccgccgccgccgaagct 561 |||||||||||||||||||| Sbjct: 149 ctgccgccgccgccgaagct 130
>gb|AY560845.1| Arabidopsis thaliana putative AP2/EREBP transcription factor (At2g35700) mRNA, complete cds Length = 585 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcgccgtcgccatctcccac 432 |||||||||||||||||||| Sbjct: 415 tcgccgtcgccatctcccac 434
>ref|XM_568198.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL06810) partial mRNA Length = 1380 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 609 cttgcgcctcgatgtccatgtcca 632 |||||||||| ||||||||||||| Sbjct: 1134 cttgcgcctccatgtccatgtcca 1111
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 cgccgccgccgaagctctcc 565 |||||||||||||||||||| Sbjct: 10424 cgccgccgccgaagctctcc 10405 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccgccgccgccgaagctctc 564 |||||||||||||||||||| Sbjct: 2018 ccgccgccgccgaagctctc 1999
>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence Length = 188853 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaaatacactctaaactgat 77 |||||||||||||||||||| Sbjct: 185195 gaaatacactctaaactgat 185176
>gb|DQ446600.1| Arabidopsis thaliana clone pENTR221-At2g35700 AP2 domain-containing transcription factor (At2g35700) mRNA, complete cds Length = 585 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcgccgtcgccatctcccac 432 |||||||||||||||||||| Sbjct: 415 tcgccgtcgccatctcccac 434
>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete sequence Length = 119389 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aaacacaaatattcctacaa 180 |||||||||||||||||||| Sbjct: 66420 aaacacaaatattcctacaa 66439
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cgccgcgatcagcccgtcgg 397 |||||||||||||||||||| Sbjct: 351275 cgccgcgatcagcccgtcgg 351256
>gb|AC134380.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNPb106I21, complete sequence Length = 6207 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggtcgccgtcgccatctccc 430 |||||||||||||||||||| Sbjct: 2271 ggtcgccgtcgccatctccc 2252
>emb|CR859737.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1525 (from clone DKFZp469A1525) Length = 2937 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ccgtgatgcacgtcctgccg 547 |||||||||||||||||||| Sbjct: 1344 ccgtgatgcacgtcctgccg 1325
>emb|CR857297.1| Pongo pygmaeus mRNA; cDNA DKFZp469G0621 (from clone DKFZp469G0621) Length = 2988 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ccgtgatgcacgtcctgccg 547 |||||||||||||||||||| Sbjct: 1373 ccgtgatgcacgtcctgccg 1354
>gb|AC069256.15| Homo sapiens 3 BAC RP11-445G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149986 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 cagcatcctagaatcctccttctg 217 ||||||| |||||||||||||||| Sbjct: 115525 cagcatcgtagaatcctccttctg 115548
>gb|AC092944.14| Homo sapiens 3 BAC RP11-550I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184688 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 cagcatcctagaatcctccttctg 217 ||||||| |||||||||||||||| Sbjct: 38014 cagcatcgtagaatcctccttctg 37991
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcgccgtcgccatctcccac 432 |||||||||||||||||||| Sbjct: 38518 tcgccgtcgccatctcccac 38499
>gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex BAC MMU281E18, complete sequence Length = 188725 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ttgacagtatcaaaaccttccaac 156 ||||| |||||||||||||||||| Sbjct: 123024 ttgactgtatcaaaaccttccaac 123001
>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete sequence Length = 215614 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ttgacagtatcaaaaccttccaac 156 ||||| |||||||||||||||||| Sbjct: 181159 ttgactgtatcaaaaccttccaac 181136
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 3898733 cctgccgccgccgccgaagc 3898714 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 3886910 cctgccgccgccgccgaagc 3886891 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 3848854 cctgccgccgccgccgaagc 3848835
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 4609 cctgccgccgccgccgaagc 4590
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 144864 cctgccgccgccgccgaagc 144845 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 cctgccgccgccgccgaagc 560 |||||||||||||||||||| Sbjct: 106808 cctgccgccgccgccgaagc 106789
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gccgccgccgccgaagctct 563 |||||||||||||||||||| Sbjct: 115566 gccgccgccgccgaagctct 115585
>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8, complete sequence Length = 217745 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaacacctaaacacaaata 171 |||||||||||||||||||| Sbjct: 10136 ccaacacctaaacacaaata 10155 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,528,840 Number of Sequences: 3902068 Number of extensions: 5528840 Number of successful extensions: 121414 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119150 Number of HSP's gapped (non-prelim): 2242 length of query: 647 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 624 effective length of database: 17,143,297,704 effective search space: 10697417767296 effective search space used: 10697417767296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)