>ZGPAT_MOUSE (Q8VDM1) Zinc finger CCCH-type with G patch domain protein|
          Length = 511

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 28/88 (31%), Positives = 37/88 (42%)
 Frame = +2

Query: 275 SVEAPRKNSIRQ*VCMRILPCKDSRNCCLAQYKQEAGSSTPPKV*TEGTKKERSKPRCNT 454
           +V  PR  S+ Q  C  IL  K  R         +AGS+ PPK    G++ E   P  N 
Sbjct: 345 AVVLPRGKSLDQ--CAEILQKKTKRG--------QAGSNRPPKCRRSGSRPEGRPPPRNV 394

Query: 455 *DKTYSTPREKVA*KPHAEQETTERNPK 538
            D      + +V   P A  +T ER  K
Sbjct: 395 FDFLNEKLQSQVPGTPDAGVDTPERRNK 422

>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase large subunit)
          Length = 929

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 199 PTSWVVDFLRRAARTHRNKPSQCSVKRRSPKEEFYSSVSMHENTS 333
           P  + VD     A   R  P+   +K+RSP    Y+S+ + ENTS
Sbjct: 748 PIQFTVDQEALRATDDRVAPAHSGLKKRSPPAGTYTSIVLRENTS 792

>ARGO_PHOLL (Q7N183) Arginine exporter protein argO|
          Length = 207

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 38/120 (31%)
 Frame = -2

Query: 457 LGVAPGLATLFLSTLSLNFWRSGRSSFLFILGQAAISAVL-------------------- 338
           +GV  G A L  STL L F   G  +FLF  G  A+  VL                    
Sbjct: 53  VGVFGGSALLSQSTLLLQFVTWGGVAFLFWYGWGALRVVLFANVELAQVNNSVKNRWRVV 112

Query: 337 ------AWKYSHAYL------------LTNRILPWGFYASLSTAMACFYVYVLLAGGNPP 212
                  W   H YL            L++ + PW  + + S +++ F+   LLA    P
Sbjct: 113 AIIFAVTWLNPHVYLDTIVVLGSIGGQLSSDLRPWFTFGAASASVSWFFSLSLLAAWFSP 172

>SOX13_MOUSE (Q04891) SOX-13 protein|
          Length = 985

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 380 LPVYIGPSSNFCCPCMEVFSCIL 312
           LP+Y  PSS+  CPC     CIL
Sbjct: 851 LPMYTSPSSSSVCPCSHHTRCIL 873

>HPRK_MYCGA (Q7NAE2) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 317

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 12  LQPPAVLFARCYLNPTIRKHTNIEEDITLLC 104
           LQPP ++  + +L+P   K  N E  + +LC
Sbjct: 89  LQPPVLILTKSFLDPVFLKECNKEYKVPILC 119

>NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (Protein|
           baellchen)
          Length = 599

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
 Frame = +2

Query: 263 SAQ*SVEAPRKNSIRQ*VCMRILPCKDSRNCCLAQYKQEAGSSTPP----KV*TEGTKKE 430
           SA    E   + S R+    ++ P   +RN  ++  K+ A SS P     K   + T +E
Sbjct: 388 SASEDDEEEEEKSHRKKTAKKVTP--SARNAKVSPLKRVADSSPPSQKRVKTEPKSTPRE 445

Query: 431 RSKPRCNT*DKTYSTPREKVA*KPHAEQETTERNPKTKI 547
           R+ P+ +   K  STP  K + KP        R P  KI
Sbjct: 446 RATPKAS--PKPRSTP--KASPKPQTPTAARLRTPNAKI 480

>DHM1_PARDE (P12293) Methanol dehydrogenase subunit 1 precursor (EC 1.1.99.8)|
           (MDH large alpha subunit) (MEDH)
          Length = 631

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +1

Query: 166 PAPCSRSMVPGPTSWVVDFLRRAARTHRNKPSQCSVKRRSPKEEF-YSSVS---MHENTS 333
           PAP + +M PG   W +    R A T   K       +++P +E+ Y+ V+   + E   
Sbjct: 294 PAPWNETMRPGDNKWTMAIWGREATTGEAK----FAYQKTPHDEWDYAGVNVMMLSEQED 349

Query: 334 MQGQQKLLL 360
            QGQ + LL
Sbjct: 350 KQGQMRKLL 358

>FA86A_HUMAN (Q96G04) Protein FAM86A|
          Length = 330

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 18  PPAVLFARCYLNPTIRKHTNIEED 89
           PP+V +ARC+L+  I+KH  +  +
Sbjct: 64  PPSVKYARCFLSELIKKHEAVHTE 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,229,478
Number of Sequences: 219361
Number of extensions: 1741257
Number of successful extensions: 4121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4118
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)