ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 428 bits (216), Expect = e-116 Identities = 387/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 285 cctcctcttgacggtgacggcgagcccgttcttcatgtggagaatgatggacagcttggg 344 |||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||| || Sbjct: 2195149 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 2195090 Query: 345 ctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacggcggcggcggc 404 ||| ||| |||| || ||||| |||| |||||||||||||| | |||||| || || | Sbjct: 2195089 ctcgacggcgtgccccggcaccacctccacggcgaagttccacatcacggccgccgccac 2195030 Query: 405 ggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttga 464 |||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 2195029 ggtcttgagctgcacgaacgccagctccttgccgaggcacgtcctcgggcc-ggcgttga 2194971 Query: 465 aggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctct 524 |||||| ||||||||| ||||||||||||| ||||||||| ||| | | | |||||||| Sbjct: 2194970 aggagaagaacttgtacgacggctcgtaccgcagcttcccttcgctggtgatccacctct 2194911 Query: 525 ccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccatgcagtagg 584 ||||| ||||||| |||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 2194910 ccggcaggaactccgtgcagtccttgccccacacgccttccatcctgcccatggagtagg 2194851 Query: 585 agaagatgagtatcttgtcgccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 644 |||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2194850 agaacacgagtaccttgtctccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 2194791 Query: 645 ccaccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagc 704 | || |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 2194790 cggccaccgccttgtgctcgaacggcac-cgacgggtacagcctcaggcactcggacagc 2194732 Query: 705 ggccgcgtgcaggtacacca 724 ||||| ||||||||||||| Sbjct: 2194731 -gccgcttgcaggtacacca 2194713 Score = 285 bits (144), Expect = 1e-73 Identities = 351/416 (84%), Gaps = 3/416 (0%) Strand = Plus / Minus Query: 306 gagcccgttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcac 365 |||||| |||||||||||||| |||| ||||||| | ||||| |||||||| || ||||| Sbjct: 2206727 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 2206668 Query: 366 ggcctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgc 425 |||| ||||| |||||||| || ||| || || | | |||||||||||||| ||| Sbjct: 2206667 cacctccacggcaaagttccacgccatggccgccgccgtgaccttcatctgcacgagcgc 2206608 Query: 426 catctccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacg 485 |||||||||||||||||| |||||||| ||||| |||||| | || |||||||| |||| Sbjct: 2206607 catctccttgccgaggcatgtcctcgg-cccggagttgaacgcgacgaacttgttcgacg 2206549 Query: 486 gctcgtacctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagt 545 || |||||| |||||| ||||| || | | ||||| |||||||||||||||| |||||| Sbjct: 2206548 gcacgtaccgcagcttgccgtcctcggtgatccaccgctccggcctgaactccctgcagt 2206489 Query: 546 ccttgccccacacgccctccatcctcgccatgcagtaggagaagatgagtatcttgtcgc 605 ||||||||||||| | || ||||||| ||||| ||||| |||| | || | |||||||| Sbjct: 2206488 ccttgccccacacccgcttcatcctccccatggagtagtagaacaccagcaccttgtcgc 2206429 Query: 606 cggccttcatctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcga 665 ||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 2206428 cggccatcacctcgtgcccgctggggagcacgtcgtcggcgaccgccgccttgtgctcca 2206369 Query: 666 agggcacgggacgggtacagcctcaggcactcgcacagcggccgcgtgcaggtaca 721 | ||||| || |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 2206368 aaggcaccgg-cgggtacagcctcatggcctcgcaaag-ggccgcgtgcaggtaca 2206315 Score = 174 bits (88), Expect = 3e-40 Identities = 221/264 (83%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||| |||||||| ||||||||||| |||||||| || | ||||||||| Sbjct: 2183069 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 2183010 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 | |||||||| | || || || || |||||||| | ||||||||||||||| ||| Sbjct: 2183009 atctcgaagttcttcattaccgccgccgccgcggtcttgagctgcacgaacgccatgtcc 2182950 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | ||||||||| ||||||||||| || ||| |||| Sbjct: 2182949 ttgccgaggcaggtccg-gggccccgagttgaaggacatgaacttgtacgatggcacgta 2182891 Query: 493 cctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagtccttgcc 552 || |||||| |||||| || | ||||| |||||||||||||||||||||||| |||| Sbjct: 2182890 ccgcagcttgccgtcgtcggagatccaccgctccggcctgaactccatgcagtcgctgcc 2182831 Query: 553 ccacacgccctccatcctcgccat 576 ||||||| |||||||||| |||| Sbjct: 2182830 ccacacggactccatcctccccat 2182807 Score = 91.7 bits (46), Expect = 3e-15 Identities = 122/146 (83%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 |||||| |||||||| |||||||| |||||||||| || |||| | |||||| ||| Sbjct: 2153370 ctgcactaacgccatgtccttgcctaggcaggtccgaggccccgt-gatgaagggcgtga 2153312 Query: 474 acttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctctccggcctga 533 ||||||| |||||| |||||| |||||| |||||| || | ||||| ||||||||||| Sbjct: 2153311 acttgtacgacggcacgtaccgcagcttgccgtcgtcggagatccaccgctccggcctga 2153252 Query: 534 actccatgcagtccttgccccacacg 559 ||||||||||||| ||||||||||| Sbjct: 2153251 actccatgcagtcgctgccccacacg 2153226 Score = 87.7 bits (44), Expect = 5e-14 Identities = 137/164 (83%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 ||||||||||||||| ||||||||||||||||||| ||||| | | |||||| |||| Sbjct: 2161844 ctgcacgaacgccatgtccttgccgaggcaggtcc-gtggccctgagctgaaggtcatga 2161786 Query: 474 acttgtaggacggctcgtacctcagcttcccgt-cggcgttcacccacctctccggcctg 532 ||||||| ||||| |||||| |||||| |||| | || | | ||||| |||||||||| Sbjct: 2161785 acttgtacgacggtacgtaccgcagcttgccgtccttcgat-atccaccgctccggcctg 2161727 Query: 533 aactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||| | ||||||| | ||||||||| |||||||||||||||| Sbjct: 2161726 aacttcctgcagtcgctaccccacacggcctccatcctcgccat 2161683 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| Sbjct: 2153471 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 2153412 Query: 373 a 373 | Sbjct: 2153411 a 2153411 Score = 65.9 bits (33), Expect = 2e-07 Identities = 187/237 (78%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 334 gacagcttgggctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacg 393 |||| ||||||||| ||| |||| || | ||| |||||| | ||||||||||| |||| Sbjct: 2098519 gacaccttgggctccacggcgtggccggccaccacctcgaggtcgaagttccaggccacg 2098460 Query: 394 gcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcggg 453 ||||||||| || |||||||||||| | || || ||||| |||||||| |||| || Sbjct: 2098459 gcggcggcgacgctcttcatctgcagcaccgagatgtccttcccgaggcacagcctc-gg 2098401 Query: 454 cccggcgttgaaggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgtt 513 |||||||||||| | |||||| ||| | |||| ||| || ||| || ||||| | | Sbjct: 2098400 cccggcgttgaacggcatgaacctgtgcgccggcacgtgccgcagtttgccgtcctccgt 2098341 Query: 514 cacccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 |||||||| |||||||||| |||| || |||||| |||||||||| | ||||||| Sbjct: 2098340 cacccaccgctccggcctgtactcgccgctgtccttcccccacacgctcgccatcct 2098284 Score = 61.9 bits (31), Expect = 3e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacggg 675 ||||||||||||||| ||||| ||| |||| ||| |||||||||| | |||||||| Sbjct: 2182767 ctcgtgcccgctcggcagcacatcggcggcggccgggcccttgtgctccattggcacggg 2182708 Query: 676 acgggtacagcctcaggcactcgcacagcggccgcgtgcaggtacac 722 |||||||||||| || |||||||||| ||| |||||||||||||| Sbjct: 2182707 -cgggtacagcctgagcgactcgcacag-ggcggcgtgcaggtacac 2182663 Score = 44.1 bits (22), Expect = 0.64 Identities = 87/106 (82%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 619 gtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacgggacg 678 |||||| |||||||||||||| || |||| || |||||| |||||| ||| | || || Sbjct: 2098235 gtgcccactcgggagcacgtcttccgccagcgtcgccttccgctcgatcggccccgg-cg 2098177 Query: 679 ggtacagcctcaggcactcgcacagcggccgcgtgcaggtacacca 724 ||||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 2098176 ggtacagccgcatcgactcgaacagc-gccgcctgcaggtacacca 2098132 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gagcacggcggcggcggcggt 407 ||||||||||||||||||||| Sbjct: 13900178 gagcacggcggcggcggcggt 13900198
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 428 bits (216), Expect = e-116 Identities = 387/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 285 cctcctcttgacggtgacggcgagcccgttcttcatgtggagaatgatggacagcttggg 344 |||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||| || Sbjct: 85443 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 85384 Query: 345 ctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacggcggcggcggc 404 ||| ||| |||| || ||||| |||| |||||||||||||| | |||||| || || | Sbjct: 85383 ctcgacggcgtgccccggcaccacctccacggcgaagttccacatcacggccgccgccac 85324 Query: 405 ggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttga 464 |||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 85323 ggtcttgagctgcacgaacgccagctccttgccgaggcacgtcctcgggcc-ggcgttga 85265 Query: 465 aggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctct 524 |||||| ||||||||| ||||||||||||| ||||||||| ||| | | | |||||||| Sbjct: 85264 aggagaagaacttgtacgacggctcgtaccgcagcttcccttcgctggtgatccacctct 85205 Query: 525 ccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccatgcagtagg 584 ||||| ||||||| |||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 85204 ccggcaggaactccgtgcagtccttgccccacacgccttccatcctgcccatggagtagg 85145 Query: 585 agaagatgagtatcttgtcgccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 644 |||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 85144 agaacacgagtaccttgtctccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 85085 Query: 645 ccaccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagc 704 | || |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 85084 cggccaccgccttgtgctcgaacggcac-cgacgggtacagcctcaggcactcggacagc 85026 Query: 705 ggccgcgtgcaggtacacca 724 ||||| ||||||||||||| Sbjct: 85025 -gccgcttgcaggtacacca 85007 Score = 285 bits (144), Expect = 1e-73 Identities = 351/416 (84%), Gaps = 3/416 (0%) Strand = Plus / Minus Query: 306 gagcccgttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcac 365 |||||| |||||||||||||| |||| ||||||| | ||||| |||||||| || ||||| Sbjct: 97021 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 96962 Query: 366 ggcctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgc 425 |||| ||||| |||||||| || ||| || || | | |||||||||||||| ||| Sbjct: 96961 cacctccacggcaaagttccacgccatggccgccgccgtgaccttcatctgcacgagcgc 96902 Query: 426 catctccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacg 485 |||||||||||||||||| |||||||| ||||| |||||| | || |||||||| |||| Sbjct: 96901 catctccttgccgaggcatgtcctcgg-cccggagttgaacgcgacgaacttgttcgacg 96843 Query: 486 gctcgtacctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagt 545 || |||||| |||||| ||||| || | | ||||| |||||||||||||||| |||||| Sbjct: 96842 gcacgtaccgcagcttgccgtcctcggtgatccaccgctccggcctgaactccctgcagt 96783 Query: 546 ccttgccccacacgccctccatcctcgccatgcagtaggagaagatgagtatcttgtcgc 605 ||||||||||||| | || ||||||| ||||| ||||| |||| | || | |||||||| Sbjct: 96782 ccttgccccacacccgcttcatcctccccatggagtagtagaacaccagcaccttgtcgc 96723 Query: 606 cggccttcatctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcga 665 ||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 96722 cggccatcacctcgtgcccgctggggagcacgtcgtcggcgaccgccgccttgtgctcca 96663 Query: 666 agggcacgggacgggtacagcctcaggcactcgcacagcggccgcgtgcaggtaca 721 | ||||| || |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 96662 aaggcaccgg-cgggtacagcctcatggcctcgcaaag-ggccgcgtgcaggtaca 96609 Score = 174 bits (88), Expect = 3e-40 Identities = 221/264 (83%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||| |||||||| ||||||||||| |||||||| || | ||||||||| Sbjct: 73363 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 73304 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 | |||||||| | || || || || |||||||| | ||||||||||||||| ||| Sbjct: 73303 atctcgaagttcttcattaccgccgccgccgcggtcttgagctgcacgaacgccatgtcc 73244 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | ||||||||| ||||||||||| || ||| |||| Sbjct: 73243 ttgccgaggcaggtccg-gggccccgagttgaaggacatgaacttgtacgatggcacgta 73185 Query: 493 cctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagtccttgcc 552 || |||||| |||||| || | ||||| |||||||||||||||||||||||| |||| Sbjct: 73184 ccgcagcttgccgtcgtcggagatccaccgctccggcctgaactccatgcagtcgctgcc 73125 Query: 553 ccacacgccctccatcctcgccat 576 ||||||| |||||||||| |||| Sbjct: 73124 ccacacggactccatcctccccat 73101 Score = 91.7 bits (46), Expect = 3e-15 Identities = 122/146 (83%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 |||||| |||||||| |||||||| |||||||||| || |||| | |||||| ||| Sbjct: 43664 ctgcactaacgccatgtccttgcctaggcaggtccgaggccccgt-gatgaagggcgtga 43606 Query: 474 acttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctctccggcctga 533 ||||||| |||||| |||||| |||||| |||||| || | ||||| ||||||||||| Sbjct: 43605 acttgtacgacggcacgtaccgcagcttgccgtcgtcggagatccaccgctccggcctga 43546 Query: 534 actccatgcagtccttgccccacacg 559 ||||||||||||| ||||||||||| Sbjct: 43545 actccatgcagtcgctgccccacacg 43520 Score = 87.7 bits (44), Expect = 5e-14 Identities = 137/164 (83%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 ||||||||||||||| ||||||||||||||||||| ||||| | | |||||| |||| Sbjct: 52138 ctgcacgaacgccatgtccttgccgaggcaggtcc-gtggccctgagctgaaggtcatga 52080 Query: 474 acttgtaggacggctcgtacctcagcttcccgt-cggcgttcacccacctctccggcctg 532 ||||||| ||||| |||||| |||||| |||| | || | | ||||| |||||||||| Sbjct: 52079 acttgtacgacggtacgtaccgcagcttgccgtccttcgat-atccaccgctccggcctg 52021 Query: 533 aactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||| | ||||||| | ||||||||| |||||||||||||||| Sbjct: 52020 aacttcctgcagtcgctaccccacacggcctccatcctcgccat 51977 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| Sbjct: 43765 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 43706 Query: 373 a 373 | Sbjct: 43705 a 43705 Score = 61.9 bits (31), Expect = 3e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacggg 675 ||||||||||||||| ||||| ||| |||| ||| |||||||||| | |||||||| Sbjct: 73061 ctcgtgcccgctcggcagcacatcggcggcggccgggcccttgtgctccattggcacggg 73002 Query: 676 acgggtacagcctcaggcactcgcacagcggccgcgtgcaggtacac 722 |||||||||||| || |||||||||| ||| |||||||||||||| Sbjct: 73001 -cgggtacagcctgagcgactcgcacag-ggcggcgtgcaggtacac 72957
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 428 bits (216), Expect = e-116 Identities = 387/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Plus Query: 285 cctcctcttgacggtgacggcgagcccgttcttcatgtggagaatgatggacagcttggg 344 |||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||| || Sbjct: 130907 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 130966 Query: 345 ctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacggcggcggcggc 404 ||| ||| |||| || ||||| |||| |||||||||||||| | |||||| || || | Sbjct: 130967 ctcgacggcgtgccccggcaccacctccacggcgaagttccacatcacggccgccgccac 131026 Query: 405 ggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttga 464 |||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 131027 ggtcttgagctgcacgaacgccagctccttgccgaggcacgtcctcgggcc-ggcgttga 131085 Query: 465 aggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctct 524 |||||| ||||||||| ||||||||||||| ||||||||| ||| | | | |||||||| Sbjct: 131086 aggagaagaacttgtacgacggctcgtaccgcagcttcccttcgctggtgatccacctct 131145 Query: 525 ccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccatgcagtagg 584 ||||| ||||||| |||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 131146 ccggcaggaactccgtgcagtccttgccccacacgccttccatcctgcccatggagtagg 131205 Query: 585 agaagatgagtatcttgtcgccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 644 |||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131206 agaacacgagtaccttgtctccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 131265 Query: 645 ccaccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagc 704 | || |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 131266 cggccaccgccttgtgctcgaacggcac-cgacgggtacagcctcaggcactcggacagc 131324 Query: 705 ggccgcgtgcaggtacacca 724 ||||| ||||||||||||| Sbjct: 131325 -gccgcttgcaggtacacca 131343 Score = 285 bits (144), Expect = 1e-73 Identities = 351/416 (84%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 306 gagcccgttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcac 365 |||||| |||||||||||||| |||| ||||||| | ||||| |||||||| || ||||| Sbjct: 119329 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 119388 Query: 366 ggcctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgc 425 |||| ||||| |||||||| || ||| || || | | |||||||||||||| ||| Sbjct: 119389 cacctccacggcaaagttccacgccatggccgccgccgtgaccttcatctgcacgagcgc 119448 Query: 426 catctccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacg 485 |||||||||||||||||| |||||||| ||||| |||||| | || |||||||| |||| Sbjct: 119449 catctccttgccgaggcatgtcctcgg-cccggagttgaacgcgacgaacttgttcgacg 119507 Query: 486 gctcgtacctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagt 545 || |||||| |||||| ||||| || | | ||||| |||||||||||||||| |||||| Sbjct: 119508 gcacgtaccgcagcttgccgtcctcggtgatccaccgctccggcctgaactccctgcagt 119567 Query: 546 ccttgccccacacgccctccatcctcgccatgcagtaggagaagatgagtatcttgtcgc 605 ||||||||||||| | || ||||||| ||||| ||||| |||| | || | |||||||| Sbjct: 119568 ccttgccccacacccgcttcatcctccccatggagtagtagaacaccagcaccttgtcgc 119627 Query: 606 cggccttcatctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcga 665 ||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 119628 cggccatcacctcgtgcccgctggggagcacgtcgtcggcgaccgccgccttgtgctcca 119687 Query: 666 agggcacgggacgggtacagcctcaggcactcgcacagcggccgcgtgcaggtaca 721 | ||||| || |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 119688 aaggcaccgg-cgggtacagcctcatggcctcgcaaag-ggccgcgtgcaggtaca 119741
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 428 bits (216), Expect = e-116 Identities = 387/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 285 cctcctcttgacggtgacggcgagcccgttcttcatgtggagaatgatggacagcttggg 344 |||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||| || Sbjct: 2195161 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 2195102 Query: 345 ctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacggcggcggcggc 404 ||| ||| |||| || ||||| |||| |||||||||||||| | |||||| || || | Sbjct: 2195101 ctcgacggcgtgccccggcaccacctccacggcgaagttccacatcacggccgccgccac 2195042 Query: 405 ggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttga 464 |||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 2195041 ggtcttgagctgcacgaacgccagctccttgccgaggcacgtcctcgggcc-ggcgttga 2194983 Query: 465 aggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctct 524 |||||| ||||||||| ||||||||||||| ||||||||| ||| | | | |||||||| Sbjct: 2194982 aggagaagaacttgtacgacggctcgtaccgcagcttcccttcgctggtgatccacctct 2194923 Query: 525 ccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccatgcagtagg 584 ||||| ||||||| |||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 2194922 ccggcaggaactccgtgcagtccttgccccacacgccttccatcctgcccatggagtagg 2194863 Query: 585 agaagatgagtatcttgtcgccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 644 |||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2194862 agaacacgagtaccttgtctccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 2194803 Query: 645 ccaccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagc 704 | || |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 2194802 cggccaccgccttgtgctcgaacggcac-cgacgggtacagcctcaggcactcggacagc 2194744 Query: 705 ggccgcgtgcaggtacacca 724 ||||| ||||||||||||| Sbjct: 2194743 -gccgcttgcaggtacacca 2194725 Score = 285 bits (144), Expect = 1e-73 Identities = 351/416 (84%), Gaps = 3/416 (0%) Strand = Plus / Minus Query: 306 gagcccgttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcac 365 |||||| |||||||||||||| |||| ||||||| | ||||| |||||||| || ||||| Sbjct: 2206739 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 2206680 Query: 366 ggcctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgc 425 |||| ||||| |||||||| || ||| || || | | |||||||||||||| ||| Sbjct: 2206679 cacctccacggcaaagttccacgccatggccgccgccgtgaccttcatctgcacgagcgc 2206620 Query: 426 catctccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacg 485 |||||||||||||||||| |||||||| ||||| |||||| | || |||||||| |||| Sbjct: 2206619 catctccttgccgaggcatgtcctcgg-cccggagttgaacgcgacgaacttgttcgacg 2206561 Query: 486 gctcgtacctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagt 545 || |||||| |||||| ||||| || | | ||||| |||||||||||||||| |||||| Sbjct: 2206560 gcacgtaccgcagcttgccgtcctcggtgatccaccgctccggcctgaactccctgcagt 2206501 Query: 546 ccttgccccacacgccctccatcctcgccatgcagtaggagaagatgagtatcttgtcgc 605 ||||||||||||| | || ||||||| ||||| ||||| |||| | || | |||||||| Sbjct: 2206500 ccttgccccacacccgcttcatcctccccatggagtagtagaacaccagcaccttgtcgc 2206441 Query: 606 cggccttcatctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcga 665 ||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 2206440 cggccatcacctcgtgcccgctggggagcacgtcgtcggcgaccgccgccttgtgctcca 2206381 Query: 666 agggcacgggacgggtacagcctcaggcactcgcacagcggccgcgtgcaggtaca 721 | ||||| || |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 2206380 aaggcaccgg-cgggtacagcctcatggcctcgcaaag-ggccgcgtgcaggtaca 2206327 Score = 174 bits (88), Expect = 3e-40 Identities = 221/264 (83%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||| |||||||| ||||||||||| |||||||| || | ||||||||| Sbjct: 2183081 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 2183022 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 | |||||||| | || || || || |||||||| | ||||||||||||||| ||| Sbjct: 2183021 atctcgaagttcttcattaccgccgccgccgcggtcttgagctgcacgaacgccatgtcc 2182962 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | ||||||||| ||||||||||| || ||| |||| Sbjct: 2182961 ttgccgaggcaggtccg-gggccccgagttgaaggacatgaacttgtacgatggcacgta 2182903 Query: 493 cctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagtccttgcc 552 || |||||| |||||| || | ||||| |||||||||||||||||||||||| |||| Sbjct: 2182902 ccgcagcttgccgtcgtcggagatccaccgctccggcctgaactccatgcagtcgctgcc 2182843 Query: 553 ccacacgccctccatcctcgccat 576 ||||||| |||||||||| |||| Sbjct: 2182842 ccacacggactccatcctccccat 2182819 Score = 91.7 bits (46), Expect = 3e-15 Identities = 122/146 (83%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 |||||| |||||||| |||||||| |||||||||| || |||| | |||||| ||| Sbjct: 2153382 ctgcactaacgccatgtccttgcctaggcaggtccgaggccccgt-gatgaagggcgtga 2153324 Query: 474 acttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctctccggcctga 533 ||||||| |||||| |||||| |||||| |||||| || | ||||| ||||||||||| Sbjct: 2153323 acttgtacgacggcacgtaccgcagcttgccgtcgtcggagatccaccgctccggcctga 2153264 Query: 534 actccatgcagtccttgccccacacg 559 ||||||||||||| ||||||||||| Sbjct: 2153263 actccatgcagtcgctgccccacacg 2153238 Score = 87.7 bits (44), Expect = 5e-14 Identities = 137/164 (83%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 414 ctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttgaaggagatga 473 ||||||||||||||| ||||||||||||||||||| ||||| | | |||||| |||| Sbjct: 2161856 ctgcacgaacgccatgtccttgccgaggcaggtcc-gtggccctgagctgaaggtcatga 2161798 Query: 474 acttgtaggacggctcgtacctcagcttcccgt-cggcgttcacccacctctccggcctg 532 ||||||| ||||| |||||| |||||| |||| | || | | ||||| |||||||||| Sbjct: 2161797 acttgtacgacggtacgtaccgcagcttgccgtccttcgat-atccaccgctccggcctg 2161739 Query: 533 aactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||| | ||||||| | ||||||||| |||||||||||||||| Sbjct: 2161738 aacttcctgcagtcgctaccccacacggcctccatcctcgccat 2161695 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| Sbjct: 2153483 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 2153424 Query: 373 a 373 | Sbjct: 2153423 a 2153423 Score = 65.9 bits (33), Expect = 2e-07 Identities = 187/237 (78%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 334 gacagcttgggctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacg 393 |||| ||||||||| ||| |||| || | ||| |||||| | ||||||||||| |||| Sbjct: 2098531 gacaccttgggctccacggcgtggccggccaccacctcgaggtcgaagttccaggccacg 2098472 Query: 394 gcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcggg 453 ||||||||| || |||||||||||| | || || ||||| |||||||| |||| || Sbjct: 2098471 gcggcggcgacgctcttcatctgcagcaccgagatgtccttcccgaggcacagcctc-gg 2098413 Query: 454 cccggcgttgaaggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgtt 513 |||||||||||| | |||||| ||| | |||| ||| || ||| || ||||| | | Sbjct: 2098412 cccggcgttgaacggcatgaacctgtgcgccggcacgtgccgcagtttgccgtcctccgt 2098353 Query: 514 cacccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 |||||||| |||||||||| |||| || |||||| |||||||||| | ||||||| Sbjct: 2098352 cacccaccgctccggcctgtactcgccgctgtccttcccccacacgctcgccatcct 2098296 Score = 61.9 bits (31), Expect = 3e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacggg 675 ||||||||||||||| ||||| ||| |||| ||| |||||||||| | |||||||| Sbjct: 2182779 ctcgtgcccgctcggcagcacatcggcggcggccgggcccttgtgctccattggcacggg 2182720 Query: 676 acgggtacagcctcaggcactcgcacagcggccgcgtgcaggtacac 722 |||||||||||| || |||||||||| ||| |||||||||||||| Sbjct: 2182719 -cgggtacagcctgagcgactcgcacag-ggcggcgtgcaggtacac 2182675 Score = 44.1 bits (22), Expect = 0.64 Identities = 87/106 (82%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 619 gtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacgggacg 678 |||||| |||||||||||||| || |||| || |||||| |||||| ||| | || || Sbjct: 2098247 gtgcccactcgggagcacgtcttccgccagcgtcgccttccgctcgatcggccccgg-cg 2098189 Query: 679 ggtacagcctcaggcactcgcacagcggccgcgtgcaggtacacca 724 ||||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 2098188 ggtacagccgcatcgactcgaacagc-gccgcctgcaggtacacca 2098144 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gagcacggcggcggcggcggt 407 ||||||||||||||||||||| Sbjct: 13895153 gagcacggcggcggcggcggt 13895173
>dbj|AK061292.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B03, full insert sequence Length = 1120 Score = 428 bits (216), Expect = e-116 Identities = 387/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 285 cctcctcttgacggtgacggcgagcccgttcttcatgtggagaatgatggacagcttggg 344 |||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||| || Sbjct: 701 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 642 Query: 345 ctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacggcggcggcggc 404 ||| ||| |||| || ||||| |||| |||||||||||||| | |||||| || || | Sbjct: 641 ctcgacggcgtgccccggcaccacctccacggcgaagttccacatcacggccgccgccac 582 Query: 405 ggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgttga 464 |||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 581 ggtcttgagctgcacgaacgccagctccttgccgaggcacgtcctcgggcc-ggcgttga 523 Query: 465 aggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgttcacccacctct 524 |||||| ||||||||| ||||||||||||| ||||||||| ||| | | | |||||||| Sbjct: 522 aggagaagaacttgtacgacggctcgtaccgcagcttcccttcgctggtgatccacctct 463 Query: 525 ccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccatgcagtagg 584 ||||| ||||||| |||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 462 ccggcaggaactccgtgcagtccttgccccacacgccttccatcctgcccatggagtagg 403 Query: 585 agaagatgagtatcttgtcgccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 644 |||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 402 agaacacgagtaccttgtctccggccttcatctcgtgcccgctcgggagcacgtcgtcgg 343 Query: 645 ccaccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagc 704 | || |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 342 cggccaccgccttgtgctcgaacggcac-cgacgggtacagcctcaggcactcggacagc 284 Query: 705 ggccgcgtgcaggtacacca 724 ||||| ||||||||||||| Sbjct: 283 -gccgcttgcaggtacacca 265
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 285 bits (144), Expect = 1e-73 Identities = 351/416 (84%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 306 gagcccgttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcac 365 |||||| |||||||||||||| |||| ||||||| | ||||| |||||||| || ||||| Sbjct: 88 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 147 Query: 366 ggcctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgc 425 |||| ||||| |||||||| || ||| || || | | |||||||||||||| ||| Sbjct: 148 cacctccacggcaaagttccacgccatggccgccgccgtgaccttcatctgcacgagcgc 207 Query: 426 catctccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacg 485 |||||||||||||||||| |||||||| ||||| |||||| | || |||||||| |||| Sbjct: 208 catctccttgccgaggcatgtcctcgg-cccggagttgaacgcgacgaacttgttcgacg 266 Query: 486 gctcgtacctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagt 545 || |||||| |||||| ||||| || | | ||||| |||||||||||||||| |||||| Sbjct: 267 gcacgtaccgcagcttgccgtcctcggtgatccaccgctccggcctgaactccctgcagt 326 Query: 546 ccttgccccacacgccctccatcctcgccatgcagtaggagaagatgagtatcttgtcgc 605 ||||||||||||| | || ||||||| ||||| ||||| |||| | || | |||||||| Sbjct: 327 ccttgccccacacccgcttcatcctccccatggagtagtagaacaccagcaccttgtcgc 386 Query: 606 cggccttcatctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcga 665 ||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 387 cggccatcacctcgtgcccgctggggagcacgtcgtcggcgaccgccgccttgtgctcca 446 Query: 666 agggcacgggacgggtacagcctcaggcactcgcacagcggccgcgtgcaggtaca 721 | ||||| || |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 447 aaggcaccgg-cgggtacagcctcatggcctcgcaaag-ggccgcgtgcaggtaca 500
>dbj|AK067844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125N12, full insert sequence Length = 1549 Score = 174 bits (88), Expect = 3e-40 Identities = 221/264 (83%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||| |||||||| ||||||||||| |||||||| || | ||||||||| Sbjct: 1386 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 1327 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 | |||||||| | || || || || |||||||| | ||||||||||||||| ||| Sbjct: 1326 atctcgaagttcttcattaccgccgccgccgcggtcttgagctgcacgaacgccatgtcc 1267 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | ||||||||| ||||||||||| || ||| |||| Sbjct: 1266 ttgccgaggcaggtccg-gggccccgagttgaaggacatgaacttgtacgatggcacgta 1208 Query: 493 cctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagtccttgcc 552 || |||||| |||||| || | ||||| |||||||||||||||||||||||| |||| Sbjct: 1207 ccgcagcttgccgtcgtcggagatccaccgctccggcctgaactccatgcagtcgctgcc 1148 Query: 553 ccacacgccctccatcctcgccat 576 ||||||| |||||||||| |||| Sbjct: 1147 ccacacggactccatcctccccat 1124 Score = 61.9 bits (31), Expect = 3e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacggg 675 ||||||||||||||| ||||| ||| |||| ||| |||||||||| | |||||||| Sbjct: 1084 ctcgtgcccgctcggcagcacatcggcggcggccgggcccttgtgctccattggcacggg 1025 Query: 676 acgggtacagcctcaggcactcgcacagcggccgcgtgcaggtacac 722 |||||||||||| || |||||||||| ||| |||||||||||||| Sbjct: 1024 -cgggtacagcctgagcgactcgcacag-ggcggcgtgcaggtacac 980
>dbj|AK119195.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C06, full insert sequence Length = 1658 Score = 167 bits (84), Expect = 6e-38 Identities = 220/264 (83%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 |||||||||||||| |||||||| ||||||||||| |||||||| || | ||||||||| Sbjct: 1523 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 1464 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 | |||||||| | || || || | |||||||| | ||||||||||||||| ||| Sbjct: 1463 atctcgaagttcttcattaccgccgccaccgcggtcttgagctgcacgaacgccatgtcc 1404 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | ||||||||| ||||||||||| || ||| |||| Sbjct: 1403 ttgccgaggcaggtccg-gggccccgagttgaaggacatgaacttgtacgatggcacgta 1345 Query: 493 cctcagcttcccgtcggcgttcacccacctctccggcctgaactccatgcagtccttgcc 552 || |||||| |||||| || | ||||| |||||||||||||||||||||||| |||| Sbjct: 1344 ccgcagcttgccgtcgtcggagatccaccgctccggcctgaactccatgcagtcgctgcc 1285 Query: 553 ccacacgccctccatcctcgccat 576 ||||||| |||||||||| |||| Sbjct: 1284 ccacacggactccatcctccccat 1261 Score = 61.9 bits (31), Expect = 3e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacggg 675 ||||||||||||||| ||||| ||| |||| ||| |||||||||| | |||||||| Sbjct: 1221 ctcgtgcccgctcggcagcacatcggcggcggccgggcccttgtgctccattggcacggg 1162 Query: 676 acgggtacagcctcaggcactcgcacagcggccgcgtgcaggtacac 722 |||||||||||| || |||||||||| ||| |||||||||||||| Sbjct: 1161 -cgggtacagcctgagcgactcgcacag-ggcggcgtgcaggtacac 1117
>gb|AY109756.1| Zea mays CL309_1 mRNA sequence Length = 1914 Score = 121 bits (61), Expect = 3e-24 Identities = 151/182 (82%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 313 ttcttcatgtggagaatgatggacagcttgggctcaacgacgtgtcctggcacggcctcg 372 ||||||||||| || |||||||||||||||||||| |||||||| || ||||| ||||| Sbjct: 1585 ttcttcatgtgaagtatgatggacagcttgggctccacgacgtgccccggcaccgcctcc 1526 Query: 373 acggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgccatctcc 432 ||| ||||||| | || ||| | || | | ||||| ||||||||||||||| ||| Sbjct: 1525 acgtcgaagttgctgaccacnnnnnccgccgncgncttcagctgcacgaacgccatgtcc 1466 Query: 433 ttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgtaggacggctcgta 492 |||||||||||||||| |||||| | |||||| || ||||||||||| |||||| |||| Sbjct: 1465 ttgccgaggcaggtcc-ggggccccgagttgaacgacatgaacttgtacgacggcacgta 1407 Query: 493 cc 494 || Sbjct: 1406 cc 1405
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggt 446 |||||||||| |||| || ||||||||| |||||||||||||||||||||||||| || Sbjct: 37236 gagcacggcgctggcgacgaacttcatctggacgaacgccatctccttgccgaggcacgt 37177 Query: 447 cctcgg 452 |||||| Sbjct: 37176 cctcgg 37171
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggt 446 |||||||||| |||| || ||||||||| |||||||||||||||||||||||||| || Sbjct: 137061 gagcacggcgctggcgacgaacttcatctggacgaacgccatctccttgccgaggcacgt 137002 Query: 447 cctcgg 452 |||||| Sbjct: 137001 cctcgg 136996
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggt 446 |||||||||| |||| || ||||||||| |||||||||||||||||||||||||| || Sbjct: 16396626 gagcacggcgctggcgacgaacttcatctggacgaacgccatctccttgccgaggcacgt 16396567 Query: 447 cctcgg 452 |||||| Sbjct: 16396566 cctcgg 16396561 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1788349 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1788398 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1769721 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1769672 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 1788463 ctccggcctgtactccatgcagtcctcgcccca 1788495 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 374 cggcgaagttccagagcacggcggcggcggcgg 406 ||||| |||||||| | |||||||||||||||| Sbjct: 23246778 cggcgcagttccagcgaacggcggcggcggcgg 23246746
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggt 446 |||||||||| |||| || ||||||||| |||||||||||||||||||||||||| || Sbjct: 16487641 gagcacggcgctggcgacgaacttcatctggacgaacgccatctccttgccgaggcacgt 16487582 Query: 447 cctcgg 452 |||||| Sbjct: 16487581 cctcgg 16487576 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1786070 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1786119 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1767442 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1767393 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 1786184 ctccggcctgtactccatgcagtcctcgcccca 1786216 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 374 cggcgaagttccagagcacggcggcggcggcgg 406 ||||| |||||||| | |||||||||||||||| Sbjct: 23556688 cggcgcagttccagcgaacggcggcggcggcgg 23556656
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 65.9 bits (33), Expect = 2e-07 Identities = 187/237 (78%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 334 gacagcttgggctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacg 393 |||| ||||||||| ||| |||| || | ||| |||||| | ||||||||||| |||| Sbjct: 135942 gacaccttgggctccacggcgtggccggccaccacctcgaggtcgaagttccaggccacg 135883 Query: 394 gcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcggg 453 ||||||||| || |||||||||||| | || || ||||| |||||||| |||| || Sbjct: 135882 gcggcggcgacgctcttcatctgcagcaccgagatgtccttcccgaggcacagcctc-gg 135824 Query: 454 cccggcgttgaaggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgtt 513 |||||||||||| | |||||| ||| | |||| ||| || ||| || ||||| | | Sbjct: 135823 cccggcgttgaacggcatgaacctgtgcgccggcacgtgccgcagtttgccgtcctccgt 135764 Query: 514 cacccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 |||||||| |||||||||| |||| || |||||| |||||||||| | ||||||| Sbjct: 135763 cacccaccgctccggcctgtactcgccgctgtccttcccccacacgctcgccatcct 135707 Score = 44.1 bits (22), Expect = 0.64 Identities = 87/106 (82%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 619 gtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacgggacg 678 |||||| |||||||||||||| || |||| || |||||| |||||| ||| | || || Sbjct: 135658 gtgcccactcgggagcacgtcttccgccagcgtcgccttccgctcgatcggccccgg-cg 135600 Query: 679 ggtacagcctcaggcactcgcacagcggccgcgtgcaggtacacca 724 ||||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 135599 ggtacagccgcatcgactcgaacagc-gccgcctgcaggtacacca 135555
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcc 448 ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 14910648 cttcatctgcacgaacgccatgtccttgccgaggcacgtcc 14910688 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1723881 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1723930 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1716611 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1716562 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 1723995 ctccggcctgtactccatgcagtcctcgcccca 1724027
>dbj|AK105857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H07, full insert sequence Length = 1723 Score = 65.9 bits (33), Expect = 2e-07 Identities = 187/237 (78%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 334 gacagcttgggctcaacgacgtgtcctggcacggcctcgacggcgaagttccagagcacg 393 |||| ||||||||| ||| |||| || | ||| |||||| | ||||||||||| |||| Sbjct: 1571 gacaccttgggctccacggcgtggccggccaccacctcgaggtcgaagttccaggccacg 1512 Query: 394 gcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcggg 453 ||||||||| || |||||||||||| | || || ||||| |||||||| |||| || Sbjct: 1511 gcggcggcgacgctcttcatctgcagcaccgagatgtccttcccgaggcacagcctc-gg 1453 Query: 454 cccggcgttgaaggagatgaacttgtaggacggctcgtacctcagcttcccgtcggcgtt 513 |||||||||||| | |||||| ||| | |||| ||| || ||| || ||||| | | Sbjct: 1452 cccggcgttgaacggcatgaacctgtgcgccggcacgtgccgcagtttgccgtcctccgt 1393 Query: 514 cacccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 |||||||| |||||||||| |||| || |||||| |||||||||| | ||||||| Sbjct: 1392 cacccaccgctccggcctgtactcgccgctgtccttcccccacacgctcgccatcct 1336 Score = 44.1 bits (22), Expect = 0.64 Identities = 87/106 (82%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 619 gtgcccgctcgggagcacgtcgtcggccaccgccgccttgtgctcgaagggcacgggacg 678 |||||| |||||||||||||| || |||| || |||||| |||||| ||| | || || Sbjct: 1287 gtgcccactcgggagcacgtcttccgccagcgtcgccttccgctcgatcggccccgg-cg 1229 Query: 679 ggtacagcctcaggcactcgcacagcggccgcgtgcaggtacacca 724 ||||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 1228 ggtacagccgcatcgactcgaacagc-gccgcctgcaggtacacca 1184
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcc 448 ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 14864931 cttcatctgcacgaacgccatgtccttgccgaggcacgtcc 14864971 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1723857 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1723906 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1716587 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1716538 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 1723971 ctccggcctgtactccatgcagtcctcgcccca 1724003
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcc 448 ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 9238 cttcatctgcacgaacgccatgtccttgccgaggcacgtcc 9198
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcc 448 ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 171199 cttcatctgcacgaacgccatgtccttgccgaggcacgtcc 171159
>ref|XM_475175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 63.9 bits (32), Expect = 7e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 406 gtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgt 461 ||||||||||||||| ||||||||||||| |||||||| | |||| |||||||||| Sbjct: 1439 gtcttcatctgcacgtacgccatctccttcccgaggcacgccctc-ggcccggcgt 1385
>ref|XM_463749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 368 cctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgcca 427 ||||||||| ||| ||| || ||||||||| || ||| ||||||||||||| |||||| Sbjct: 1522 cctcgacggagaatctccggaccacggcggccgccacggccttcatctgcacgtacgcca 1463 Query: 428 tctccttgccgaggca 443 ||||||| |||||||| Sbjct: 1462 tctccttcccgaggca 1447
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 63.9 bits (32), Expect = 7e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 406 gtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgt 461 ||||||||||||||| ||||||||||||| |||||||| | |||| |||||||||| Sbjct: 137756 gtcttcatctgcacgtacgccatctccttcccgaggcacgccctc-ggcccggcgt 137702
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 7e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 406 gtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgt 461 ||||||||||||||| ||||||||||||| |||||||| | |||| |||||||||| Sbjct: 18344544 gtcttcatctgcacgtacgccatctccttcccgaggcacgccctc-ggcccggcgt 18344490 Score = 48.1 bits (24), Expect = 0.041 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaa 465 ||||||||||||||| ||||| |||||||||||||| Sbjct: 4829069 tccttgccgaggcagctcctc-ggcccggcgttgaa 4829035
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 368 cctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgcca 427 ||||||||| ||| ||| || ||||||||| || ||| ||||||||||||| |||||| Sbjct: 41892489 cctcgacggagaatctccggaccacggcggccgccacggccttcatctgcacgtacgcca 41892548 Query: 428 tctccttgccgaggca 443 ||||||| |||||||| Sbjct: 41892549 tctccttcccgaggca 41892564 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| |||| |||| |||||||| ||||||||||| |||| Sbjct: 4421658 ccaccgctccggcctgaactcctcgcagcccttcccccacaccgcctccatcctccccat 4421599 Query: 577 gcagtag 583 | ||||| Sbjct: 4421598 ggagtag 4421592 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 514 cacccacctctccggcctgaactccatgcagtccttgcccca 555 |||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 4417687 cacccaccgctccggcttaaactccatgcagtccttgcccca 4417646 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| ||||||| ||||||| | | |||||| ||||||||| Sbjct: 34093988 ccaccgctccggcctgaactcctcgcagtccgtgccccagatgtcctccaccctcgccat 34093929 Query: 577 g 577 | Sbjct: 34093928 g 34093928 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 390 cacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggca 443 ||||||||| || ||| ||||||||||||| ||||||||||| | |||||||| Sbjct: 41889151 cacggcggccgccacggccttcatctgcacgtacgccatctccctcccgaggca 41889204 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 317 tcatgtggagaatgatggacagcttgggc 345 |||||||||| |||||||||||||||||| Sbjct: 4421854 tcatgtggaggatgatggacagcttgggc 4421826 Score = 50.1 bits (25), Expect = 0.010 Identities = 66/77 (85%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 648 ccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagcggc 707 ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| || Sbjct: 4421527 ccgccgccttgtgctcgaacggcaccgg-cgggtacagccggagcgactccgacagc-gc 4421470 Query: 708 cgcgtgcaggtacacca 724 |||||||||||| |||| Sbjct: 4421469 cgcgtgcaggtagacca 4421453 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 34079393 gccatctccttgccgaggcacatcctcggccccg 34079360 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 34069467 gccatctccttgccgaggcacatcctcggccccg 34069434 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 43181541 agagcacggcggcggcggcgg 43181561 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgg 452 |||||||||||||||||||| ||||||| Sbjct: 34126479 gccatctccttgccgaggcacatcctcgg 34126451 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 5274276 agagcacggcggcggcggcgg 5274296
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 368 cctcgacggcgaagttccagagcacggcggcggcggcggtcttcatctgcacgaacgcca 427 ||||||||| ||| ||| || ||||||||| || ||| ||||||||||||| |||||| Sbjct: 135865 cctcgacggagaatctccggaccacggcggccgccacggccttcatctgcacgtacgcca 135924 Query: 428 tctccttgccgaggca 443 ||||||| |||||||| Sbjct: 135925 tctccttcccgaggca 135940 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 390 cacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggca 443 ||||||||| || ||| ||||||||||||| ||||||||||| | |||||||| Sbjct: 132527 cacggcggccgccacggccttcatctgcacgtacgccatctccctcccgaggca 132580
>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full insert sequence Length = 1893 Score = 63.9 bits (32), Expect = 7e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 406 gtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccggcgt 461 ||||||||||||||| ||||||||||||| |||||||| | |||| |||||||||| Sbjct: 1469 gtcttcatctgcacgtacgccatctccttcccgaggcacgccctc-ggcccggcgt 1415
>ref|NM_189587.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1788 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| |||| |||| |||||||| ||||||||||| |||| Sbjct: 1341 ccaccgctccggcctgaactcctcgcagcccttcccccacaccgcctccatcctccccat 1282 Query: 577 gcagtag 583 | ||||| Sbjct: 1281 ggagtag 1275 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 317 tcatgtggagaatgatggacagcttgggc 345 |||||||||| |||||||||||||||||| Sbjct: 1537 tcatgtggaggatgatggacagcttgggc 1509 Score = 50.1 bits (25), Expect = 0.010 Identities = 66/77 (85%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 648 ccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagcggc 707 ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| || Sbjct: 1210 ccgccgccttgtgctcgaacggcaccgg-cgggtacagccggagcgactccgacagc-gc 1153 Query: 708 cgcgtgcaggtacacca 724 |||||||||||| |||| Sbjct: 1152 cgcgtgcaggtagacca 1136
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| |||| |||| |||||||| ||||||||||| |||| Sbjct: 81740 ccaccgctccggcctgaactcctcgcagcccttcccccacaccgcctccatcctccccat 81681 Query: 577 gcagtag 583 | ||||| Sbjct: 81680 ggagtag 81674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 514 cacccacctctccggcctgaactccatgcagtccttgcccca 555 |||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 77769 cacccaccgctccggcttaaactccatgcagtccttgcccca 77728 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 317 tcatgtggagaatgatggacagcttgggc 345 |||||||||| |||||||||||||||||| Sbjct: 81936 tcatgtggaggatgatggacagcttgggc 81908 Score = 50.1 bits (25), Expect = 0.010 Identities = 66/77 (85%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 648 ccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagcggc 707 ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| || Sbjct: 81609 ccgccgccttgtgctcgaacggcaccgg-cgggtacagccggagcgactccgacagc-gc 81552 Query: 708 cgcgtgcaggtacacca 724 |||||||||||| |||| Sbjct: 81551 cgcgtgcaggtagacca 81535
>dbj|AK110852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C07, full insert sequence Length = 1788 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| |||| |||| |||||||| ||||||||||| |||| Sbjct: 1341 ccaccgctccggcctgaactcctcgcagcccttcccccacaccgcctccatcctccccat 1282 Query: 577 gcagtag 583 | ||||| Sbjct: 1281 ggagtag 1275 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 317 tcatgtggagaatgatggacagcttgggc 345 |||||||||| |||||||||||||||||| Sbjct: 1537 tcatgtggaggatgatggacagcttgggc 1509 Score = 50.1 bits (25), Expect = 0.010 Identities = 66/77 (85%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 648 ccgccgccttgtgctcgaagggcacgggacgggtacagcctcaggcactcgcacagcggc 707 ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| || Sbjct: 1210 ccgccgccttgtgctcgaacggcaccgg-cgggtacagccggagcgactccgacagc-gc 1153 Query: 708 cgcgtgcaggtacacca 724 |||||||||||| |||| Sbjct: 1152 cgcgtgcaggtagacca 1136
>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full insert sequence Length = 1711 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 406 gtcttcatctgcacgaacgccatctccttgccgaggcaggtcctcgg 452 ||||||||||||||| ||||||||||||| |||||||| | |||||| Sbjct: 198 gtcttcatctgcacgtacgccatctccttcccgaggcacgccctcgg 244
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 133892 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 133843
>ref|NM_189586.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 514 cacccacctctccggcctgaactccatgcagtccttgcccca 555 |||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 1293 cacccaccgctccggcttaaactccatgcagtccttgcccca 1252
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 6179 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 6228 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 6293 ctccggcctgtactccatgcagtcctcgcccca 6325
>dbj|AK103307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125E14, full insert sequence Length = 1928 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 1492 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 1443
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 123873 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 123922 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 116603 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 116554 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 116489 ctccggcctgtactccatgcagtcctcgcccca 116457
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 50310 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 50359 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 cttcatctgcacgaacgccatctccttgccgaggcaggtcctcgggcccg 457 ||||||||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 43040 cttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccg 42991 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 523 ctccggcctgaactccatgcagtccttgcccca 555 |||||||||| ||||||||||||||| |||||| Sbjct: 42926 ctccggcctgtactccatgcagtcctcgcccca 42894
>ref|NM_190970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| ||||||| ||||||| | | |||||| ||||||||| Sbjct: 1287 ccaccgctccggcctgaactcctcgcagtccgtgccccagatgtcctccaccctcgccat 1228 Query: 577 g 577 | Sbjct: 1227 g 1227
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 ||||| |||||||||||||||| ||||||| ||||||| | | |||||| ||||||||| Sbjct: 90466 ccaccgctccggcctgaactcctcgcagtccgtgccccagatgtcctccaccctcgccat 90407 Query: 577 g 577 | Sbjct: 90406 g 90406 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 75871 gccatctccttgccgaggcacatcctcggccccg 75838 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 65945 gccatctccttgccgaggcacatcctcggccccg 65912 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgg 452 |||||||||||||||||||| ||||||| Sbjct: 122957 gccatctccttgccgaggcacatcctcgg 122929
>ref|XM_463748.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1635 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 390 cacggcggcggcggcggtcttcatctgcacgaacgccatctccttgccgaggca 443 ||||||||| || ||| ||||||||||||| ||||||||||| | |||||||| Sbjct: 1482 cacggcggccgccacggccttcatctgcacgtacgccatctccctcccgaggca 1429
>gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete sequence Length = 147669 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtcct 548 ||||||||| ||||||||||||||||| |||| Sbjct: 136249 ccacctctctggcctgaactccatgcaatcct 136280
>dbj|AK105519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F08, full insert sequence Length = 1724 Score = 48.1 bits (24), Expect = 0.041 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaa 465 ||||||||||||||| ||||| |||||||||||||| Sbjct: 1368 tccttgccgaggcagctcctc-ggcccggcgttgaa 1334
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 48.1 bits (24), Expect = 0.041 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaa 465 ||||||||||||||| ||||| |||||||||||||| Sbjct: 101477 tccttgccgaggcagctcctc-ggcccggcgttgaa 101443
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 389 gcacggcggcggcggcggtcttc 411 ||||||||||||||||||||||| Sbjct: 297623 gcacggcggcggcggcggtcttc 297601
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 389 gcacggcggcggcggcggtcttc 411 ||||||||||||||||||||||| Sbjct: 74906 gcacggcggcggcggcggtcttc 74884
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 ctggcacggcctcgacggcgaag 381 ||||||||||||||||||||||| Sbjct: 3499370 ctggcacggcctcgacggcgaag 3499348
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||||||||||||||| ||||| ||| ||||| ||||| | || ||||||||| |||| Sbjct: 10046424 ccacctctccggcctgtactcccggcaatccttcccccataggctctccatcctgcccat 10046365 Query: 577 gcagtag 583 | ||||| Sbjct: 10046364 ggagtag 10046358 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccg 653 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 10046317 ctcgtggccgctcggcatcacgtcgtcggcgaccgccg 10046280 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Plus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 9952954 ctcgtgcccgctcggcatcacgtcgtcggc 9952983 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 9916647 cgaagttccacaccacggcggcggcgatgatcttcatctgca 9916606 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 9916400 ctcgtgcccgctcggcatcacgtcgtcggc 9916371
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.16 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgta 480 |||||||||||||| ||||||| |||||||||||| | || ||||||||| Sbjct: 27082206 tccttgccgaggcaaatcctcgg-cccggcgttgaacgcgacgaacttgta 27082255 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacac 558 ||||| ||||||||||||||| | |||||||| |||||||| Sbjct: 27082295 ccaccgctccggcctgaactcgaggcagtcctccccccacac 27082336
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 46.1 bits (23), Expect = 0.16 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgta 480 |||||||||||||| ||||||| |||||||||||| | || ||||||||| Sbjct: 53855 tccttgccgaggcaaatcctcgg-cccggcgttgaacgcgacgaacttgta 53904 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacac 558 ||||| ||||||||||||||| | |||||||| |||||||| Sbjct: 53944 ccaccgctccggcctgaactcgaggcagtcctccccccacac 53985
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 46.1 bits (23), Expect = 0.16 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgta 480 |||||||||||||| ||||||| |||||||||||| | || ||||||||| Sbjct: 135408 tccttgccgaggcaaatcctcgg-cccggcgttgaacgcgacgaacttgta 135457 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacac 558 ||||| ||||||||||||||| | |||||||| |||||||| Sbjct: 135497 ccaccgctccggcctgaactcgaggcagtcctccccccacac 135538
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||||||||||||||| ||||| ||| ||||| ||||| | || ||||||||| |||| Sbjct: 86326 ccacctctccggcctgtactcccggcaatccttcccccataggctctccatcctgcccat 86267 Query: 577 gcagtag 583 | ||||| Sbjct: 86266 ggagtag 86260 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccg 653 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 86219 ctcgtggccgctcggcatcacgtcgtcggcgaccgccg 86182
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcctcgccat 576 |||||||||||||||| ||||| ||| ||||| ||||| | || ||||||||| |||| Sbjct: 5770 ccacctctccggcctgtactcccggcaatccttcccccataggctctccatcctgcccat 5711 Query: 577 gcagtag 583 | ||||| Sbjct: 5710 ggagtag 5704 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggccaccgccg 653 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 5663 ctcgtggccgctcggcatcacgtcgtcggcgaccgccg 5626
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 46.1 bits (23), Expect = 0.16 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 430 tccttgccgaggcaggtcctcgggcccggcgttgaaggagatgaacttgta 480 |||||||||||||| ||||||| |||||||||||| | || ||||||||| Sbjct: 1522 tccttgccgaggcaaatcctcgg-cccggcgttgaacgcgacgaacttgta 1473 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacac 558 ||||| ||||||||||||||| | |||||||| |||||||| Sbjct: 1433 ccaccgctccggcctgaactcgaggcagtcctccccccacac 1392
>gb|AC129309.4| Mus musculus BAC clone RP24-343P24 from 17, complete sequence Length = 139818 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 138 cacacatgccactcttgcatacatata 164 |||||||||||| |||||||||||||| Sbjct: 120252 cacacatgccacacttgcatacatata 120226
>ref|XM_481110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1503 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 1179 ctcgtgcccgctcggcatcacgtcgtcggc 1150
>ref|XM_481105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 1466 cgaagttccacaccacggcggcggcgatgatcttcatctgca 1425 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 1219 ctcgtgcccgctcggcatcacgtcgtcggc 1190
>ref|XM_507182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0005C03.18 mRNA Length = 1697 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 1469 cgaagttccacaccacggcggcggcgatgatcttcatctgca 1428 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 1222 ctcgtgcccgctcggcatcacgtcgtcggc 1193
>ref|NM_197082.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 protein (OSJNBa0029C15.3), mRNA Length = 2093 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 ||||||||||||| || ||||| ||||||||| ||||| | || ||||||||| Sbjct: 1525 ccacctctccggcttgtactccctgcagtcctccccccagatgctctccatcct 1472
>ref|NM_190966.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 1379 gccatctccttgccgaggcacatcctcggccccg 1346
>gb|AC146252.3| Pan troglodytes BAC clone RP43-31D18 from 7, complete sequence Length = 155242 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 ttattttcttattctggtagca 124 |||||||||||||||||||||| Sbjct: 27797 ttattttcttattctggtagca 27818
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggtc 408 |||||||||||||||||||||| Sbjct: 2756301 gagcacggcggcggcggcggtc 2756280
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Minus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 ||||||||||||| || ||||| ||||||||| ||||| | || ||||||||| Sbjct: 56368 ccacctctccggcttgtactccctgcagtcctccccccagatgctctccatcct 56315
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 ||||||||||||| || ||||| ||||||||| ||||| | || ||||||||| Sbjct: 17875673 ccacctctccggcttgtactccctgcagtcctccccccagatgctctccatcct 17875726
>gb|AC005007.1|AC005007 Homo sapiens BAC clone GS1-51M12 from 7p21-p22, complete sequence Length = 136862 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 ttattttcttattctggtagca 124 |||||||||||||||||||||| Sbjct: 66791 ttattttcttattctggtagca 66770
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Plus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 100201 ctcgtgcccgctcggcatcacgtcgtcggc 100230 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 63894 cgaagttccacaccacggcggcggcgatgatcttcatctgca 63853 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 63647 ctcgtgcccgctcggcatcacgtcgtcggc 63618
>dbj|AK104291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F05, full insert sequence Length = 1694 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 1466 cgaagttccacaccacggcggcggcgatgatcttcatctgca 1425 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 1219 ctcgtgcccgctcggcatcacgtcgtcggc 1190
>dbj|AK064306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B08, full insert sequence Length = 1532 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgggcccg 457 |||||||||||||||||||| ||||||| |||| Sbjct: 1288 gccatctccttgccgaggcacatcctcggccccg 1255
>dbj|AK060990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C11, full insert sequence Length = 1697 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 377 cgaagttccagagcacggcggcggcggcggtcttcatctgca 418 |||||||||| | ||||||||||||| | |||||||||||| Sbjct: 1469 cgaagttccacaccacggcggcggcgatgatcttcatctgca 1428 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 616 ctcgtgcccgctcgggagcacgtcgtcggc 645 ||||||||||||||| | |||||||||||| Sbjct: 1222 ctcgtgcccgctcggcatcacgtcgtcggc 1193
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Plus Query: 517 ccacctctccggcctgaactccatgcagtccttgccccacacgccctccatcct 570 ||||||||||||| || ||||| ||||||||| ||||| | || ||||||||| Sbjct: 17884926 ccacctctccggcttgtactccctgcagtcctccccccagatgctctccatcct 17884979
>ref|NM_188256.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 226 agagcacggcggcggcggcgg 206
>gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosome y, complete sequence Length = 179613 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ctattcttcttattttcttattctg 118 |||||||| |||||||||||||||| Sbjct: 139806 ctattctttttattttcttattctg 139830
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 151297 agagcacggcggcggcggcgg 151317
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 863 agagcacggcggcggcggcgg 883
>gb|AC140371.3| Mus musculus BAC clone RP24-220G21 from chromosome Y, complete sequence Length = 190597 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ctattcttcttattttcttattctg 118 |||||||| |||||||||||||||| Sbjct: 190450 ctattctttttattttcttattctg 190426
>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030L19, complete sequence Length = 128848 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 374 cggcgaagttccagagcacggcggcggcggcgg 406 ||||| |||||||| | |||||||||||||||| Sbjct: 115963 cggcgcagttccagcgaacggcggcggcggcgg 115931
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 ggcggtcttcatctgcacgaa 422 ||||||||||||||||||||| Sbjct: 1661730 ggcggtcttcatctgcacgaa 1661710
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 gagcacggcggcggcggcggt 407 ||||||||||||||||||||| Sbjct: 111304 gagcacggcggcggcggcggt 111284
>emb|AL449266.17| Human DNA sequence from clone RP11-475E11 on chromosome 1 Contains the 3' end of the STXBP3 gene for syntaxin binding protein 3, a novel gene (MGC26989), a novel gene, the gene for LGN protein, the gene for Mid-1-related chloride channel 1 (MCLC) and the 3' end of novel gene (KIAA0893), complete sequence Length = 182553 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 111 ttattctggtagcagtatattactaagca 139 ||||||| |||||||| |||||||||||| Sbjct: 12035 ttattcttgtagcagtttattactaagca 12063
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 374 cggcgaagttccagagcacggcggcggcggcgg 406 ||||| |||||||| | |||||||||||||||| Sbjct: 140197 cggcgcagttccagcgaacggcggcggcggcgg 140229
>gb|AC154110.3| Ornithorhynchus anatinus BAC clone OABb-462P24 from chromosome unknown, complete sequence Length = 169179 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 atgcagtccttgccccacacg 559 ||||||||||||||||||||| Sbjct: 16763 atgcagtccttgccccacacg 16783
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 gtcgccggccttcatctcgtg 621 ||||||||||||||||||||| Sbjct: 4649202 gtcgccggccttcatctcgtg 4649222
>gb|AF321856.1|AF321856 Lolium rigidum clone FHH-t putative cytochrome P450 mRNA, complete cds Length = 1775 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 acctctccggcctgaactcca 539 ||||||||||||||||||||| Sbjct: 1328 acctctccggcctgaactcca 1308
>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone BACR03F16, complete sequence Length = 204681 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 ggctcaacgacgtgtcctggc 363 ||||||||||||||||||||| Sbjct: 185040 ggctcaacgacgtgtcctggc 185060
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 ggctcaacgacgtgtcctggc 363 ||||||||||||||||||||| Sbjct: 58477 ggctcaacgacgtgtcctggc 58497
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 19217647 agagcacggcggcggcggcgg 19217667
>dbj|AB205193.1| Oryza sativa (japonica cultivar-group) OsCKX2 mRNA for cytokinin oxidase/dehydrogenase, complete cds Length = 1698 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 247 agagcacggcggcggcggcgg 227
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 25620 agagcacggcggcggcggcgg 25640
>gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome ul, complete sequence Length = 133340 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ctattcttcttattttcttattctg 118 |||||||| |||||||||||||||| Sbjct: 102990 ctattctttttattttcttattctg 103014
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 68996 agagcacggcggcggcggcgg 69016
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 69527 agagcacggcggcggcggcgg 69547
>dbj|AK102714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105A13, full insert sequence Length = 1564 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 424 gccatctccttgccgaggcaggtcctcgg 452 |||||||||||||||||||| ||||||| Sbjct: 1337 gccatctccttgccgaggcacatcctcgg 1309
>dbj|AK099899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114B09, full insert sequence Length = 1693 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 agagcacggcggcggcggcgg 406 ||||||||||||||||||||| Sbjct: 33 agagcacggcggcggcggcgg 13
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 ggctcaacgacgtgtcctggc 363 ||||||||||||||||||||| Sbjct: 203404 ggctcaacgacgtgtcctggc 203384
>dbj|AB074913.1| Fagopyrum cymosum LFY gene for leafy, partial cds, strain:C9914 Length = 2181 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcacggcggcggcggcggtct 409 ||||||||||||||||||||| Sbjct: 423 gcacggcggcggcggcggtct 443
>dbj|AB074912.1| Fagopyrum cymosum LFY gene for leafy, partial cds, strain:C9911 Length = 2198 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcacggcggcggcggcggtct 409 ||||||||||||||||||||| Sbjct: 423 gcacggcggcggcggcggtct 443 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,922,944 Number of Sequences: 3902068 Number of extensions: 5922944 Number of successful extensions: 292887 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 277311 Number of HSP's gapped (non-prelim): 15502 length of query: 731 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 708 effective length of database: 17,143,297,704 effective search space: 12137454774432 effective search space used: 12137454774432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
