ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3f04 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 160 bits (404), Expect = 2e-39 Identities = 82/84 (97%), Positives = 82/84 (97%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ Sbjct: 176 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 235 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 DKRWFKGAKKFVENAAGSFSVA Sbjct: 236 R-DKRWFKGAKKFVENAAGSFSVA 258
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 149 bits (376), Expect = 3e-36 Identities = 72/84 (85%), Positives = 77/84 (91%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+S VA+ANVLESS PVVDGKQYYSITVLTRTADGDEGGKHQ+I ATV DGKLY+CKAQ Sbjct: 184 FDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQ 243 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVE+A SFSVA Sbjct: 244 AGDKRWFKGAKKFVESATSSFSVA 267
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 147 bits (371), Expect = 1e-35 Identities = 69/84 (82%), Positives = 79/84 (94%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+++AVA AN+LESSAPV+ GKQYY+I+VLTRTADGDEGGKHQLITATV DGKLY+CKAQ Sbjct: 176 FDTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQ 235 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA+KFVE+ A SFSVA Sbjct: 236 AGDKRWFKGARKFVEDTASSFSVA 259
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 144 bits (364), Expect = 7e-35 Identities = 70/84 (83%), Positives = 77/84 (91%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FES AVATAN+LE+S+ V GKQYY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQ Sbjct: 177 FESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 236 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVENAA SFS+A Sbjct: 237 AGDKRWFKGAKKFVENAATSFSIA 260
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 142 bits (359), Expect = 3e-34 Identities = 69/84 (82%), Positives = 75/84 (89%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FE +AV TAN+LE+S PVV GK YYSI VLTRTADGDEGGKH LITATV+DGKLY+CKAQ Sbjct: 182 FEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQ 241 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVE+AA SFS A Sbjct: 242 AGDKRWFKGAKKFVESAASSFSAA 265
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 141 bits (356), Expect = 6e-34 Identities = 68/84 (80%), Positives = 76/84 (90%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FES AVAT N+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQ Sbjct: 175 FESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 234 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVENAA SFS+A Sbjct: 235 AGDKRWFKGAKKFVENAATSFSIA 258
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 140 bits (354), Expect = 1e-33 Identities = 67/84 (79%), Positives = 76/84 (90%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+ DAVATAN+LE++A V+GK YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQ Sbjct: 180 FDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 239 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA+KFVE AA SFSVA Sbjct: 240 AGDKRWFKGARKFVEGAASSFSVA 263
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 140 bits (352), Expect = 2e-33 Identities = 67/84 (79%), Positives = 75/84 (89%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FESDAVA ANVLE+S V GKQYY +++LTRTADG+EGGKHQL+TATV DGKLY+CKAQ Sbjct: 183 FESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQ 242 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVEN A SFS+A Sbjct: 243 AGDKRWFKGAKKFVENTATSFSLA 266
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 139 bits (350), Expect = 3e-33 Identities = 65/84 (77%), Positives = 75/84 (89%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+ D+VATAN+LE S PVV GKQYY+I+VLTRTADGDEGGKH +I+ATV DGKLY+CKAQ Sbjct: 181 FDPDSVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICKAQ 240 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVE+ SF+VA Sbjct: 241 AGDKRWFKGAKKFVESTTTSFNVA 264
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 139 bits (349), Expect = 4e-33 Identities = 68/84 (80%), Positives = 75/84 (89%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FESDAVA ANVLE+S+ V GK YY ++VLTRTADG+EGGKHQLITATV DGKLY+CKAQ Sbjct: 182 FESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQ 241 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGAKKFVEN A SFS+A Sbjct: 242 AGDKRWFKGAKKFVENTATSFSLA 265
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 138 bits (348), Expect = 5e-33 Identities = 67/84 (79%), Positives = 76/84 (90%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 FES AVATAN+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLI+ATV GKLY+CKAQ Sbjct: 185 FESGAVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQ 244 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA+KFVENAA SFSVA Sbjct: 245 AGDKRWFKGARKFVENAATSFSVA 268
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 137 bits (346), Expect = 8e-33 Identities = 65/84 (77%), Positives = 76/84 (90%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+++AVATAN+LE+S + GK+YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQ Sbjct: 182 FDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 241 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA+KFVENAA SFSVA Sbjct: 242 AGDKRWFKGARKFVENAATSFSVA 265
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 136 bits (343), Expect = 2e-32 Identities = 66/84 (78%), Positives = 76/84 (90%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+++AVATAN+LESS+ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQ Sbjct: 180 FDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 239 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA+KFVE+AA SFSVA Sbjct: 240 AGDKRWFKGARKFVESAATSFSVA 263
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 132 bits (331), Expect = 4e-31 Identities = 64/84 (76%), Positives = 73/84 (86%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+++AVATAN+LE++ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQ Sbjct: 177 FDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 236 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA KFVE AA SFSVA Sbjct: 237 AGDKRWFKGANKFVEKAATSFSVA 260
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 129 bits (323), Expect = 4e-30 Identities = 63/84 (75%), Positives = 72/84 (85%) Frame = -2 Query: 426 FESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ 247 F+++AVATAN+LE++ V GK YY ++VLTRTAD DEGGKHQLITATV GKLY+CKAQ Sbjct: 134 FDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQ 193 Query: 246 AGDKRWFKGAKKFVENAAGSFSVA 175 AGDKRWFKGA KFVE AA SFSVA Sbjct: 194 AGDKRWFKGANKFVEKAATSFSVA 217
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 85.1 bits (209), Expect = 6e-17 Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 2/85 (2%) Frame = -2 Query: 426 FESDAVATANVLESSAPV-VDGKQYYSITVLTRTADGDEGGKHQLITATV-ADGKLYVCK 253 F + V+ A++L+ S GK YY +L R+ADGDEGG+HQLI ATV +D KLY+ K Sbjct: 160 FAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIK 219 Query: 252 AQAGDKRWFKGAKKFVENAAGSFSV 178 Q GDKRWFKGAKK A SF+V Sbjct: 220 IQIGDKRWFKGAKKEAMGAFDSFTV 244
>MTP_PIG (Q865F1) Microsomal triglyceride transfer protein large subunit| precursor Length = 894 Score = 31.6 bits (70), Expect = 0.81 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 348 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 214 + +L R+ DGD+ QLI T+ D K+ Q G+K FKG K Sbjct: 65 VVLLWRSPDGDDD---QLIQITIKDVKVENVNQQRGEKSIFKGKK 106
>NUOG_PSEFL (Q9KGW3) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 904 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -2 Query: 408 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 229 A A+ L++SAP VDG + + R AD K LI A + G + +A A + Sbjct: 456 AVAHALDASAPAVDGLDSEAAALAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKA 515 Query: 228 FKGAKK 211 K +K Sbjct: 516 LKLREK 521
>MTP_BOVIN (P55156) Microsomal triglyceride transfer protein large subunit| precursor (Fragment) Length = 887 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 348 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 214 + +L R+ DGD+ +QLI T+ D L Q G+K FKG K Sbjct: 58 VALLWRSPDGDD---NQLIQITMKDVNLENVNQQRGEKSIFKGKK 99
>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 1 Length = 202 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 94 HACPGSVSTRCFPEEIP-LNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVEL 270 HAC G T+ E+IP N+PI YL + + G +DE+ G + L S +++ + + Sbjct: 66 HACEGDAVTKLSQEKIPHFNAPI---YL-ENKTQIGKVDEIFGPINESLFS-IKMMEGIV 120 Query: 271 AVGDGGGDELVL 306 A GD+ + Sbjct: 121 ATSYSPGDKFFI 132
>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor| Length = 274 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = -2 Query: 396 VLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGA 217 VL S+ DG+ YY + H LITAT A +LY+ +W K Sbjct: 211 VLSSNVAEHDGRLYYQFELEP---------PHVLITATAAGNRLYLFSVTGNGLQW-KRH 260 Query: 216 KKFVENAAGSFSV 178 K ++ A SF + Sbjct: 261 YKDLKRIASSFRI 273
>PHSL_DESBA (P13065) Periplasmic [NiFeSe] hydrogenase large subunit (EC| 1.12.99.6) (NiFeSe hydrogenlyase large chain) Length = 513 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -2 Query: 390 ESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFK 223 +++ P DGK SI LTR EG H I V DGK+ K G R F+ Sbjct: 2 QAATPAADGKVKISIDPLTRV----EG--HLKIEVEVKDGKVVDAKCSGGMFRGFE 51
>NUOG_ECOLI (P33602) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) (NUO7) Length = 907 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 408 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 229 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 228 FKG 220 KG Sbjct: 519 LKG 521
>NUOG_ECO57 (Q8XCX2) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 907 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 408 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 229 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 228 FKG 220 KG Sbjct: 519 LKG 521
>NUOG_PSESM (Q87ZQ4) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 905 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = -2 Query: 408 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQA 244 A A+ L++SAP V+G ++ + R AD K LI + + G + +A A Sbjct: 457 AVAHALDASAPAVEGLDSEALELAQRIADALLAAKRPLIISGSSLGSTALIEAAA 511
>DFA6_ANASP (Q8YQE2) Putative diflavin flavoprotein A 6 (EC 1.-.-.-)| Length = 570 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = -2 Query: 411 VATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKL 265 VATA S + D Y +V R GD H L+ ATV +GK+ Sbjct: 508 VATAEAENGSPVLQDALAYLECSVQNRMESGD----HWLVYATVENGKV 552
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +1 Query: 127 FPEEIPLNSP----IGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLA 258 FPE++ LN+ + +VY +T EL LEP +SGLR A Sbjct: 2407 FPEDLELNAQFLDLVNYVYRDETLSG----SELTAKLEPAFLSGLRCA 2450
>MDH_MORS5 (P48364) Malate dehydrogenase (EC 1.1.1.37)| Length = 312 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 238 VSGLRLADVELAVGDGGGDELVLPSLVSVRGPGEHRYAVVLLTVHHRRRALEHV 399 + G+ LADVE+ V G +LP L V+G VV LT + E V Sbjct: 161 LKGISLADVEVPVIGGHSGVTILPLLSQVKGVEFTAEEVVALTARIQNAGTEVV 214
>RF1_PICTO (Q6KZ24) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 410 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 40 REIDLLVHPSSCTNQRNTHACPGSVSTRCFPEEIPLNSPIGHVYLCDTEGS 192 + +DLL+ + +R T+ CP T+ F E+ P +P LCD + S Sbjct: 309 KNLDLLIISDTLKKRRYTYKCPVCNDTKTFTEK-PRETP-----LCDKDNS 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,815,879 Number of Sequences: 219361 Number of extensions: 1030477 Number of successful extensions: 2651 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2588 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2648 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
