ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving ... 650 0.0
2ref|NM_186247.2| Oryza sativa (japonica cultivar-group), mRNA 250 3e-63
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 250 3e-63
4dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 250 3e-63
5dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 3e-63
6dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 3e-63
7gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photos... 250 3e-63
8gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosy... 218 1e-53
9dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of... 218 1e-53
10gb|AY103732.1| Zea mays PCO073407 mRNA sequence 178 1e-41
11gb|AF037458.1|AF037458 Fritillaria agrestis photosystem II oxyge... 88 3e-14
12emb|X05511.1|SOOEC23 Spinach mRNA 23 kDa protein of the photosyn... 80 7e-12
13ref|NM_100545.2| Arabidopsis thaliana PSBP (OXYGEN-EVOLVING ENHA... 68 3e-08
14gb|BT015556.1| Arabidopsis thaliana At1g06680 mRNA sequence 68 3e-08
15gb|AY096487.1| Arabidopsis thaliana putative 23 kDa polypeptide ... 68 3e-08
16gb|AY074308.1| Arabidopsis thaliana putative 23 kDa polypeptide ... 68 3e-08
17gb|AY070469.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, comp... 68 3e-08
18gb|AY056416.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, comp... 68 3e-08
19dbj|AK221243.1| Arabidopsis thaliana mRNA for PSII-P protein, pa... 68 3e-08
20emb|BX813852.1|CNS0AEBT Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
21emb|BX813677.1|CNS0AE2Q Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
22emb|BX815468.1|CNS0ACDF Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
23emb|BX814211.1|CNS0ACB9 Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
24emb|BX814208.1|CNS0ACB8 Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
25emb|BX815307.1|CNS0ABGV Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
26emb|BX815232.1|CNS0ABDH Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
27emb|BX814903.1|CNS0AAGT Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
28emb|BX814881.1|CNS0AAH2 Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
29gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana... 68 3e-08
30gb|AY087305.1| Arabidopsis thaliana clone 33922 mRNA, complete s... 68 3e-08
31gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H... 68 3e-08
32emb|X98108.1|ATPSPB A.thaliana psbP gene 68 3e-08
33emb|Y08886.1|BJ23OESP2 B.juncea mRNA for 23 kD protein of oxygen... 60 6e-06
34gb|AF545584.1| Xerophyta humilis PsbP mRNA, partial cds 58 2e-05
35ref|NM_128632.2| Arabidopsis thaliana calcium ion binding AT2G30... 54 4e-04
36gb|BT015608.1| Arabidopsis thaliana At2g30790 mRNA sequence 54 4e-04
37emb|X17213.1|SA23KDP2 S.alba psbP gene for 23 kDa polypeptide of... 54 4e-04
38gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genom... 54 4e-04
39gb|BT022094.1| Arabidopsis thaliana At2g30790 mRNA, complete cds 54 4e-04
40dbj|AK175934.1| Arabidopsis thaliana mRNA for putative photosyst... 54 4e-04
41dbj|AK175821.1| Arabidopsis thaliana mRNA for putative photosyst... 54 4e-04
42dbj|AK175738.1| Arabidopsis thaliana mRNA for putative photosyst... 54 4e-04
43emb|Y07498.1|SAOES23 Sinapis alba mRNA fragment for 23kD subunit... 54 4e-04
44dbj|AB236819.1| Trifolium pratense RNA for putative PSII-P prote... 52 0.002
45emb|X78816.1|NPOEC23 N.pseudonarcissus mRNA for OEC 23 52 0.002
46dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide ... 48 0.024
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 48 0.024
48emb|X15552.1|PS23KDAP Pea mRNA for 23kDa polypeptide of the oxyg... 48 0.024
49dbj|D13296.1|PEAPSBP Pisum sativum mRNA for precursor for 23-kDa... 48 0.024
50gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 46 0.093
51emb|X99320.1|STPSBPGEN S.tuberosum mRNA for 23 kDa oxygen evolvi... 44 0.37
52gb|AY486007.1| Thlaspi caerulescens oxygen-evolving system subun... 42 1.5
53gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, co... 42 1.5
54emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase... 42 1.5
55gb|AC004824.3| Homo sapiens PAC clone RP1-20B21 from 1, complete... 42 1.5
56gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 5.7
57gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.7
58gb|AC158392.2| Mus musculus BAC clone RP24-87B5 from chromosome ... 40 5.7
59ref|XM_672016.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.7
60gb|AF333150.1| Dermatocarpon miniatum var. complicatum isolate S... 40 5.7
61emb|X57568.1|SGAMYLASE S.griseus DNA for alpha amylase gene, amy 40 5.7
62emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.7
63emb|AJ505987.1|SGA505987 Streptomyces galbus secD, secF and apt ... 40 5.7
64dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.7
65dbj|AK124745.1| Homo sapiens cDNA FLJ42755 fis, clone BRAWH3001475 40 5.7
66gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, com... 40 5.7
67gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.7
68gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.7
69dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.7
70dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.7
71gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the ... 40 5.7
72dbj|AK110218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
73gb|AC005661.1|AC005661 citb_54_o_2, complete sequence 40 5.7
74emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.7
75emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3... 40 5.7
76gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.7
77gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.7
78gb|M18244.1|STMAMYSL Streptomyces limosus alpha-amylase gene, co... 40 5.7 
>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem
           II
          Length = 967

 Score =  650 bits (328), Expect = 0.0
 Identities = 393/410 (95%), Gaps = 6/410 (1%)
 Strand = Plus / Minus

                                                                       
Query: 19  ttgtgcacacatgaatccttga-gggaaatcgacctcttagttcatccatcctcatgtac 77
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 949 ttgtgcacacatgaatccttgaagggaaatcgacctcttagttcatccatcctcatgtac 890

                                                                       
Query: 78  aaatcaaagaaacacacatgcatgccctggatcggtctctacacggtgcttccctgagga 137
           ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 889 aaatcaaagaaacacacatgcatgccctg-atcggtctctacatggtgcatccctgagga 831

                                                                       
Query: 138 gatt-ccattaaattcgccgatcggtcatgtatatttatgcgacactgaaggatcctgcg 196
            ||| |||||||| |||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 830 aatttccattaaactcgccggtcggtcgtgtatatttatgcgacgctgaaggatcctgcg 771

                                                                       
Query: 197 gcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttg 256
           ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 770 gcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctcg---ttgcgccttg 714

                                                                       
Query: 257 cagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcg 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcg 654

                                                                       
Query: 317 tctccgtccgcggtcctggtgagcaccgttatgctgtagtactgcttaccgtccaccacc 376
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tctccgtccgcggtcctcgtgagcaccgttatgctgtagtactgcttaccgtccaccacc 594

                                                             
Query: 377 ggcgccgagctctcgagcacgttggccgtcgccacagcgtctgactcgaa 426
           |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 593 ggcgccgagctctccagcacgttcgccgtcgccacagcgtctgactcgaa 544
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>ref|NM_186247.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1114

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 872 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 813

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 812 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 753

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 752 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 693

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
           |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 692 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 633

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 632 cgtccgactc 623
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Plus

                                                                           
Query: 174     atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
               ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 2169273 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 2169332

                                                                           
Query: 234     tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
               ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 2169333 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 2169392

                                                                           
Query: 294     tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
               | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 2169393 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 2169452

                                                                           
Query: 354     agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
               |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 2169453 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 2169512

                         
Query: 414     cgtctgactc 423
               |||| |||||
Sbjct: 2169513 cgtccgactc 2169522
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Plus

                                                                         
Query: 174   atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
             ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 37175 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 37234

                                                                         
Query: 234   tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
             ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 37235 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 37294

                                                                         
Query: 294   tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
             | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 37295 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 37354

                                                                         
Query: 354   agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
             |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 37355 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 37414

                       
Query: 414   cgtctgactc 423
             |||| |||||
Sbjct: 37415 cgtccgactc 37424
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>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full
           insert sequence
          Length = 1078

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 828 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 769

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 768 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 709

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 708 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 649

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
           |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 648 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 589

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 588 cgtccgactc 579
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>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full
           insert sequence
          Length = 1114

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 872 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 813

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 812 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 753

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 752 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 693

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
           |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 692 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 633

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 632 cgtccgactc 623
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>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete
           cds
          Length = 1107

 Score =  250 bits (126), Expect = 3e-63
 Identities = 219/250 (87%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 847 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 788

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 787 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 728

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 727 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 668

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
           |||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 667 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 608

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 607 cgtccgactc 598
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>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds
          Length = 1031

 Score =  218 bits (110), Expect = 1e-53
 Identities = 215/250 (86%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| ||||||| |||||| ||||||||||||||||||
Sbjct: 830 atgcgacgctgaaggagctggctgcgctctcgacaaacttcctggcgcccttgaaccacc 771

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||  ||||||||||||| ||  ||||||||||||  ||||||||| ||||
Sbjct: 770 tcttgtcgccgggctgcgccttgcagatgttcagcttgccgtcgttgacggtggccgtga 711

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 710 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 651

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
            ||||||||| ||  |||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 650 ggtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 591

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 590 cgtccgactc 581
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>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II, complete
           cds
          Length = 1008

 Score =  218 bits (110), Expect = 1e-53
 Identities = 218/250 (87%), Gaps = 3/250 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 233
           ||||||| |||||||| |  || ||| |||||||||||||| ||||||||||||||||||
Sbjct: 786 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 727

                                                                       
Query: 234 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 293
           ||||||| ||||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||
Sbjct: 726 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 667

                                                                       
Query: 294 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 353
           | |||||||||||  | |||||||| |||||||| ||||| || |||||||||| |||||
Sbjct: 666 tcagctggtgctt-gcgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 608

                                                                       
Query: 354 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 413
           ||||| |||| || ||||||||||||||||||||||| || | ||| ||||||||||| |
Sbjct: 607 agtac-gctt-ccctccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 550

                     
Query: 414 cgtctgactc 423
           |||| |||||
Sbjct: 549 cgtccgactc 540
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>gb|AY103732.1| Zea mays PCO073407 mRNA sequence
          Length = 1083

 Score =  178 bits (90), Expect = 1e-41
 Identities = 186/218 (85%)
 Strand = Plus / Minus

                                                                       
Query: 194 gcggcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgcc 253
           ||||| ||||||||   |||| ||||||||||||||||||||||||| ||||| ||||||
Sbjct: 830 gcggccttctcgactcccttcctggcgcccttgaaccacctcttgtcgccggcctgcgcc 771

                                                                       
Query: 254 ttgcagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccc 313
           ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||| || |||
Sbjct: 770 ttgcagatgtagagcttgccgtcggagacggtggccgcgatgagctggtgcttgccgccc 711

                                                                       
Query: 314 tcgtctccgtccgcggtcctggtgagcaccgttatgctgtagtactgcttaccgtccacc 373
           ||||| |||||||| |||||||||||||| |  | |  |||||||||||| ||||| | |
Sbjct: 710 tcgtcgccgtccgccgtcctggtgagcacggacacggcgtagtactgcttgccgtcgatc 651

                                                 
Query: 374 accggcgccgagctctcgagcacgttggccgtcgccac 411
           || || |  |||||||| || |||||||| || |||||
Sbjct: 650 acgggggtggagctctccaggacgttggcggtggccac 613
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>gb|AF037458.1|AF037458 Fritillaria agrestis photosystem II oxygen evolving complex protein
           2 precursor (psbP) mRNA, complete cds
          Length = 970

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                       
Query: 209 aacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagc 268
           ||||||||||| ||||||||||| |||||||| ||||| || |||||||||| |||||||
Sbjct: 767 aacttcttggctcccttgaaccatctcttgtccccggcctgtgccttgcagatgtagagc 708

                                                                       
Query: 269 ttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcgtctccgtccgcg 328
           || || || | ||| || |||| ||| |  |||||||| ||||| || |||||||| || 
Sbjct: 707 ttaccatctgtgacagttgcggagataacatggtgcttgcctccttcatctccgtcagca 648

                   
Query: 329 gtcctggt 336
           ||||||||
Sbjct: 647 gtcctggt 640
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>emb|X05511.1|SOOEC23 Spinach mRNA 23 kDa protein of the photosynthetic oxygen-evolving
           complex (OEC)
          Length = 1000

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| |||||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 806 tctcgacaaacttcttagcacccttgaaccatctcttgtctccagcttgagccttgcaga 747

                           
Query: 261 cgtagagcttgccgtc 276
            ||| ||||| |||||
Sbjct: 746 tgtaaagcttaccgtc 731
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>ref|NM_100545.2| Arabidopsis thaliana PSBP (OXYGEN-EVOLVING ENHANCER PROTEIN 2);
           calcium ion binding AT1G06680 (PSBP) mRNA, complete cds
          Length = 1085

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 824 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 765

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 764 tgtaaagctt 755
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>gb|BT015556.1| Arabidopsis thaliana At1g06680 mRNA sequence
          Length = 561

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 532 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 473

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 472 tgtaaagctt 463
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>gb|AY096487.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving
           complex (OEC) (At1g06680) mRNA, complete cds
          Length = 823

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 763 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 704

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 703 tgtaaagctt 694
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>gb|AY074308.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving
           comlex protein (At1g06680) mRNA, complete cds
          Length = 1046

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 820 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 761

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 760 tgtaaagctt 751
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>gb|AY070469.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds
          Length = 937

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 818 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 759

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 758 tgtaaagctt 749
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>gb|AY056416.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds
          Length = 935

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 818 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 759

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 758 tgtaaagctt 749
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>dbj|AK221243.1| Arabidopsis thaliana mRNA for PSII-P protein, partial cds, clone:
           RAFL24-01-M24
          Length = 292

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 72  tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 13

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 12  tgtaaagctt 3
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>emb|BX813852.1|CNS0AEBT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB42ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 948

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 806 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 747

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 746 tgtaaagctt 737
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>emb|BX813677.1|CNS0AE2Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB32ZA05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 739

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 544 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 485

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 484 tgtaaagctt 475
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>emb|BX815468.1|CNS0ACDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 922

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 777 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 718

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 717 tgtaaagctt 708
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>emb|BX814211.1|CNS0ACB9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZH06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 994

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 804 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 745

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 744 tgtaaagctt 735
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>emb|BX814208.1|CNS0ACB8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZH01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 661

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 450 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 391

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 390 tgtaaagctt 381
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>emb|BX815307.1|CNS0ABGV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1014

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 804 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 745

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 744 tgtaaagctt 735
to top
>emb|BX815232.1|CNS0ABDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZE08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 806 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 747

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 746 tgtaaagctt 737
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>emb|BX814903.1|CNS0AAGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZA03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 570

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 374 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 315

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 314 tgtaaagctt 305
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>emb|BX814881.1|CNS0AAH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS16ZA07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 709

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 461 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 402

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 401 tgtaaagctt 392
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>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome
            I, complete sequence
          Length = 93724

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                        
Query: 201  tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
            ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 4853 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 4912

                      
Query: 261  cgtagagctt 270
             ||| |||||
Sbjct: 4913 tgtaaagctt 4922
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>gb|AY087305.1| Arabidopsis thaliana clone 33922 mRNA, complete sequence
          Length = 1067

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 825 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 766

                     
Query: 261 cgtagagctt 270
            ||| |||||
Sbjct: 765 tgtaaagctt 756
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>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete
             sequence
          Length = 91608

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 201   tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
             ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 85939 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 85998

                       
Query: 261   cgtagagctt 270
              ||| |||||
Sbjct: 85999 tgtaaagctt 86008
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>emb|X98108.1|ATPSPB A.thaliana psbP gene
          Length = 1683

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 201  tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
            ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 1508 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 1449

                      
Query: 261  cgtagagctt 270
             ||| |||||
Sbjct: 1448 tgtaaagctt 1439
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>emb|Y08886.1|BJ23OESP2 B.juncea mRNA for 23 kD protein of oxygen evolving system of
           photosystem II
          Length = 754

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 215 ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 611 ttggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 566
to top
>gb|AF545584.1| Xerophyta humilis PsbP mRNA, partial cds
          Length = 732

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                       
Query: 221 cccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcg 280
           ||||| |||||||||||||| || || ||  ||||||| | ||||||||| || || |  
Sbjct: 728 cccttaaaccacctcttgtcaccagcctggaccttgcaaatgtagagcttcccatccgac 669

                                                                       
Query: 281 acggtggcggtgatgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagc 340
           ||||| |||| ||| | |||||||||||| || || || ||||| || ||||| ||||| 
Sbjct: 668 acggttgcggcgataatctggtgcttcccaccttcatccccgtcggcagtcctcgtgaga 609

                            
Query: 341 accgttatgctgtagta 357
           |||| |||| |||||||
Sbjct: 608 accgatatgttgtagta 592
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>ref|NM_128632.2| Arabidopsis thaliana calcium ion binding AT2G30790 mRNA, complete
           cds
          Length = 786

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 758 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 700
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>gb|BT015608.1| Arabidopsis thaliana At2g30790 mRNA sequence
          Length = 581

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 553 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 495
to top
>emb|X17213.1|SA23KDP2 S.alba psbP gene for 23 kDa polypeptide of the oxygen-evolving
            complex of photosystem II
          Length = 1936

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 215  ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgcc 273
            ||||| || |||||||||||||||||||| ||||| || |||||||  || ||||||||
Sbjct: 1424 ttggctcctttgaaccacctcttgtctccagcttgtgctttgcagatataaagcttgcc 1366
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>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete
             sequence
          Length = 79574

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 200   ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
             ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 72957 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 73015
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>gb|BT022094.1| Arabidopsis thaliana At2g30790 mRNA, complete cds
          Length = 833

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 765 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 707
to top
>dbj|AK175934.1| Arabidopsis thaliana mRNA for putative photosystem II
           oxygen-evolving complex 23K protein, complete cds,
           clone: RAFL22-60-I02
          Length = 936

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735
to top
>dbj|AK175821.1| Arabidopsis thaliana mRNA for putative photosystem II
           oxygen-evolving complex 23K protein, complete cds,
           clone: RAFL22-42-D16
          Length = 936

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735
to top
>dbj|AK175738.1| Arabidopsis thaliana mRNA for putative photosystem II
           oxygen-evolving complex 23K protein, complete cds,
           clone: RAFL22-28-H07
          Length = 936

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 258
           ||||| ||||||||| | || || |||||||||||||||||||| ||||| || |||||
Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735
to top
>emb|Y07498.1|SAOES23 Sinapis alba mRNA fragment for 23kD subunit of oxygen evolving
           system of photosystem II
          Length = 867

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 215 ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgcc 273
           ||||| || |||||||||||||||||||| ||||| || |||||||  || ||||||||
Sbjct: 705 ttggctcctttgaaccacctcttgtctccagcttgtgctttgcagatataaagcttgcc 647
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>dbj|AB236819.1| Trifolium pratense RNA for putative PSII-P protein, partial cds,
           clone: C214
          Length = 915

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 221 cccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcg 280
           ||||| ||||||||||||||||| ||||| |||||||| | ||| || ||||| ||    
Sbjct: 739 cccttaaaccacctcttgtctccagcttgagccttgcaaatgtatagtttgccatcattt 680

                                     
Query: 281 acggtggcggtgatgagctggtgctt 306
           ||||| ||||| || |||||||||||
Sbjct: 679 acggttgcggtaatcagctggtgctt 654
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>emb|X78816.1|NPOEC23 N.pseudonarcissus mRNA for OEC 23
          Length = 932

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 209 aacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagc 268
           ||||||||||| ||||||||||| |||||||| || || || || ||||||| ||| |||
Sbjct: 793 aacttcttggctcccttgaaccatctcttgtcgccagcctgagctttgcagatgtaaagc 734

             
Query: 269 tt 270
           ||
Sbjct: 733 tt 732
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>dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide of the
           oxygen-evolving complex of photosystem II, complete cds
          Length = 1023

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 227 aaccacctcttgtctccggcttgcgccttgca 258
           ||||||||||||||||| ||||| ||||||||
Sbjct: 751 aaccacctcttgtctcctgcttgtgccttgca 720
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 276     cggcgacggtggcggtgatgagctggtgcttc 307
               ||||||||| |||||||| |||||||||||||
Sbjct: 4994412 cggcgacggcggcggtgaggagctggtgcttc 4994443
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>emb|X15552.1|PS23KDAP Pea mRNA for 23kDa polypeptide of the oxygen evolving complex of
           photosystem II
          Length = 987

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 221 cccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||| |||||||||||||| || ||||| ||||||||||
Sbjct: 759 cccttaaaccacctcttgtcaccagcttgagccttgcaga 720
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>dbj|D13296.1|PEAPSBP Pisum sativum mRNA for precursor for 23-kDa protein of photosystem
           II, complete cds
          Length = 1026

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 221 cccttgaaccacctcttgtctccggcttgcgccttgcaga 260
           ||||| |||||||||||||| || ||||| ||||||||||
Sbjct: 803 cccttaaaccacctcttgtcaccagcttgagccttgcaga 764
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 250     cgccttgcagacgtagagcttgccgtcggcg 280
               |||||||||| ||||| ||||||||||||||
Sbjct: 3966281 cgccttgcagtcgtagggcttgccgtcggcg 3966251
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>emb|X99320.1|STPSBPGEN S.tuberosum mRNA for 23 kDa oxygen evolving protein of photosystem
           II
          Length = 1089

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 200 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcag 259
           ||||| || ||||| ||||| ||||| ||||| |||||||| || ||||| |||||||| 
Sbjct: 822 ttctccacaaactttttggcacccttaaaccatctcttgtcaccagcttgtgccttgcaa 763

                                                             
Query: 260 acgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccc 309
           | ||| || ||||| ||    || ||||| ||||| | ||||||||||||
Sbjct: 762 atgtaaagtttgccatcattcactgtggctgtgatcaactggtgcttccc 713
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>gb|AY486007.1| Thlaspi caerulescens oxygen-evolving system subunit-like mRNA,
           partial sequence
          Length = 861

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 216 tggcgcccttgaaccacctcttgtctcc 243
           |||| |||||||||| ||||||||||||
Sbjct: 749 tggctcccttgaaccncctcttgtctcc 722
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>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence
          Length = 214124

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     tccatcctcatgtacaaatca 83
              |||||||||||||||||||||
Sbjct: 136776 tccatcctcatgtacaaatca 136756
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>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes)
          Length = 355060

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 39     gagggaaatcgacctcttagttcat 63
              ||||||||||||||||| |||||||
Sbjct: 304548 gagggaaatcgacctctaagttcat 304572
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>gb|AC004824.3| Homo sapiens PAC clone RP1-20B21 from 1, complete sequence
          Length = 137506

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 39     gagggaaatcgacctcttagttcat 63
              ||||||||||||||||| |||||||
Sbjct: 103537 gagggaaatcgacctctaagttcat 103513
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 260     acgtagagcttgccgtcggcgacg 283
               |||||| |||||||||||||||||
Sbjct: 1153026 acgtagggcttgccgtcggcgacg 1153049
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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   cgtagagcttgccgtcggcg 280
             ||||||||||||||||||||
Sbjct: 88384 cgtagagcttgccgtcggcg 88365
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>gb|AC158392.2| Mus musculus BAC clone RP24-87B5 from chromosome 14, complete sequence
          Length = 187798

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    acaaatcaaagaaacacacatgca 99
             |||||| |||||||||||||||||
Sbjct: 74134 acaaatgaaagaaacacacatgca 74157
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>ref|XM_672016.1| Plasmodium berghei strain ANKA hypothetical protein (PB000859.01.0)
           partial mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 attccattaaattcgccgat 158
           ||||||||||||||||||||
Sbjct: 751 attccattaaattcgccgat 770
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>gb|AF333150.1| Dermatocarpon miniatum var. complicatum isolate SH50 16S ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence; 28S ribosomal RNA gene,
           partial sequence
          Length = 555

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 gccgtcggcgacggtggcgg 290
           ||||||||||||||||||||
Sbjct: 371 gccgtcggcgacggtggcgg 390
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>emb|X57568.1|SGAMYLASE S.griseus DNA for alpha amylase gene, amy
          Length = 2271

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 270  tgccgtcggcgacggtggcggtga 293
            ||||| ||||||||||||||||||
Sbjct: 1659 tgccggcggcgacggtggcggtga 1636
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 257     cagacgtagagcttgccgtcggcg 280
               |||||||||| |||||||||||||
Sbjct: 1236698 cagacgtagatcttgccgtcggcg 1236721
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>emb|AJ505987.1|SGA505987 Streptomyces galbus secD, secF and apt genes
          Length = 4312

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 cgaacttcttggcgcccttg 226
           ||||||||||||||||||||
Sbjct: 948 cgaacttcttggcgcccttg 929
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 366     cgtccaccaccggcgccgag 385
               ||||||||||||||||||||
Sbjct: 1285623 cgtccaccaccggcgccgag 1285642
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>dbj|AK124745.1| Homo sapiens cDNA FLJ42755 fis, clone BRAWH3001475
          Length = 3636

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   acaaatcaaagaaacacaca 95
            ||||||||||||||||||||
Sbjct: 1906 acaaatcaaagaaacacaca 1887
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>gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, complete sequence
          Length = 218074

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     acaaatcaaagaaacacaca 95
              ||||||||||||||||||||
Sbjct: 108556 acaaatcaaagaaacacaca 108575
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     gccgtcggcgacggtggcgg 290
               ||||||||||||||||||||
Sbjct: 2933968 gccgtcggcgacggtggcgg 2933987
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 272     ccgtcggcgacggtggcggtgatg 295
               ||||||| ||||||||||||||||
Sbjct: 2651022 ccgtcggggacggtggcggtgatg 2651045
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     ggtggcggtgatgagctggt 302
               ||||||||||||||||||||
Sbjct: 3268701 ggtggcggtgatgagctggt 3268682
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     tcgacgaacttcttggcgcc 222
               ||||||||||||||||||||
Sbjct: 2923401 tcgacgaacttcttggcgcc 2923420
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>gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the complete genome
          Length = 17112

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  cgtcggcgacggtggcggtg 292
            ||||||||||||||||||||
Sbjct: 5429 cgtcggcgacggtggcggtg 5410
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>dbj|AK110218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-D08, full
            insert sequence
          Length = 3457

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  cgtcggcgacggtggcggtg 292
            ||||||||||||||||||||
Sbjct: 2578 cgtcggcgacggtggcggtg 2559
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>gb|AC005661.1|AC005661 citb_54_o_2, complete sequence
          Length = 84633

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    acaaatcaaagaaacacaca 95
             ||||||||||||||||||||
Sbjct: 25815 acaaatcaaagaaacacaca 25834
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     gtcggcgacggtggcggtga 293
               ||||||||||||||||||||
Sbjct: 1946850 gtcggcgacggtggcggtga 1946869
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>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE
          Length = 211224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 227   aaccacctcttgtctccggcttgcgccttgca 258
             ||||||||||||||||| ||||| || |||||
Sbjct: 39365 aaccacctcttgtctccagcttgagctttgca 39396
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 366     cgtccaccaccggcgccgag 385
               ||||||||||||||||||||
Sbjct: 1309400 cgtccaccaccggcgccgag 1309419
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    cgtagagcttgccgtcggcg 280
              ||||||||||||||||||||
Sbjct: 440189 cgtagagcttgccgtcggcg 440208
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>gb|M18244.1|STMAMYSL Streptomyces limosus alpha-amylase gene, complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 270  tgccgtcggcgacggtggcggtga 293
            ||||| ||||||||||||||||||
Sbjct: 1652 tgccggcggcgacggtggcggtga 1629


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,195,965
Number of Sequences: 3902068
Number of extensions: 3195965
Number of successful extensions: 69213
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 68330
Number of HSP's gapped (non-prelim): 878
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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