>gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosome 9, complete sequence
          Length = 152872

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 83    agaaaggcaaagtgagccaaagctac 108
             ||||||||| ||||||||||||||||
Sbjct: 70479 agaaaggcagagtgagccaaagctac 70454

>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete
             sequence
          Length = 212874

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 83    agaaaggcaaagtgagccaaagctac 108
             ||||||||| ||||||||||||||||
Sbjct: 37878 agaaaggcagagtgagccaaagctac 37853

>gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosome 12, complete sequence
          Length = 201338

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    agaaaactcttgtcatcaatt 183
              |||||||||||||||||||||
Sbjct: 171591 agaaaactcttgtcatcaatt 171571

>gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, complete sequence
          Length = 164776

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 163    agaaaactcttgtcatcaatt 183
              |||||||||||||||||||||
Sbjct: 113192 agaaaactcttgtcatcaatt 113212

>emb|CR376783.22| Zebrafish DNA sequence from clone DKEY-41N20 in linkage group 13,
              complete sequence
          Length = 205064

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    gttaataactaaaaagtgca 220
              ||||||||||||||||||||
Sbjct: 168559 gttaataactaaaaagtgca 168578

>gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, complete sequence
          Length = 191721

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    ccacaccagttaataactaa 212
              ||||||||||||||||||||
Sbjct: 134536 ccacaccagttaataactaa 134555

>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20,
              complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    tgccacaccagttaataact 210
              ||||||||||||||||||||
Sbjct: 157467 tgccacaccagttaataact 157486

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 556     catccatggcaaaggcatca 575
               ||||||||||||||||||||
Sbjct: 3460056 catccatggcaaaggcatca 3460075

>dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete sequence
          Length = 80610

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   aggctcgggcagatcaacca 414
             ||||||||||||||||||||
Sbjct: 32066 aggctcgggcagatcaacca 32085

>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast
           ribulose-phosphate 3-epimerase mature form
          Length = 849

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 cagatcaaccacatcaagca 486
           ||||||||||||||||||||
Sbjct: 535 cagatcaaccacatcaagca 516

>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast
           ribulose-phosphate 3-epimerase transit form
          Length = 993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 cagatcaaccacatcaagca 486
           ||||||||||||||||||||
Sbjct: 679 cagatcaaccacatcaagca 660

>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 1230

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 cagatcaaccacatcaagca 486
           ||||||||||||||||||||
Sbjct: 644 cagatcaaccacatcaagca 625

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 500      ggcagacgcattgacctctgatgg 523
                |||||| |||||||||||||||||
Sbjct: 21170306 ggcagaggcattgacctctgatgg 21170329

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      catcaattttgtacatgcca 195
                ||||||||||||||||||||
Sbjct: 38410598 catcaattttgtacatgcca 38410617

>gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, complete sequence
          Length = 80609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   aggctcgggcagatcaacca 414
             ||||||||||||||||||||
Sbjct: 32065 aggctcgggcagatcaacca 32084

>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  catcaattttgtacatgcca 195
            ||||||||||||||||||||
Sbjct: 3702 catcaattttgtacatgcca 3721

>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065E10
          Length = 183580

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcaattttgtacatgcca 195
              ||||||||||||||||||||
Sbjct: 171423 catcaattttgtacatgcca 171442

>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 500    ggcagacgcattgacctctgatgg 523
              |||||| |||||||||||||||||
Sbjct: 141516 ggcagaggcattgacctctgatgg 141539

>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20,
              complete sequence
          Length = 195359

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    tgccacaccagttaataact 210
              ||||||||||||||||||||
Sbjct: 174661 tgccacaccagttaataact 174680

>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate
           3-epimerase mRNA, complete cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 cagatcaaccacatcaagca 486
           ||||||||||||||||||||
Sbjct: 636 cagatcaaccacatcaagca 617


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,515,983
Number of Sequences: 3902068
Number of extensions: 4515983
Number of successful extensions: 70632
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70537
Number of HSP's gapped (non-prelim): 95
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)