ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2p19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185313.2| Oryza sativa (japonica cultivar-group), mRNA 141 4e-30
2dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 4e-30
3gb|BT024030.1| Zea mays clone EL01N0422F01 mRNA sequence 125 2e-25
4gb|AY106062.1| Zea mays PCO084327 mRNA sequence 125 2e-25
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
6dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
7dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
8gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, com... 42 2.4
9gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete... 42 2.4
10gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 42 2.4
11gb|AC007730.3| Arabidopsis thaliana chromosome 2 BAC T5M2 genomi... 42 2.4
12gb|AC007143.5| Arabidopsis thaliana chromosome 2 BAC T17H1 genom... 42 2.4
13emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome 42 2.4
14dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.4
15emb|X91201.1|MTATRT1 A.thaliana mitochondrial DNA for TY1/copia-... 42 2.4
16ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion binding A... 40 9.5
17ref|XM_754534.1| Ustilago maydis 521 hypothetical protein (UM034... 40 9.5
18gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosom... 40 9.5
19gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, comple... 40 9.5
20emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on ch... 40 9.5
21emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 9.5
22emb|BX942836.11| Zebrafish DNA sequence from clone CH211-61G16 i... 40 9.5
23emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in l... 40 9.5
24gb|S69352.1| Mus musculus BRN-3c (Brn-3c) gene, complete cds 40 9.5
25dbj|AK039639.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 9.5
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
27dbj|AB040765.2| Mus musculus Polk gene for DNA polymerase kappa,... 40 9.5
28gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome... 40 9.5
29dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.5
30emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, c... 40 9.5
31dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.5
32dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
33dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
34emb|AL928954.9| Zebrafish DNA sequence from clone CH211-127D4 in... 40 9.5 
>ref|NM_185313.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2223

 Score =  141 bits (71), Expect = 4e-30
 Identities = 214/258 (82%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 433  ccatgaggcttctgagccttttgtttttccttgaggaggccacagaagagggcgttgtct 492
            |||||||||||||||||||| ||||| |||||||||||||||||| ||||   ||| |||
Sbjct: 1767 ccatgaggcttctgagccttctgtttatccttgaggaggccacagtagagcatgttatct 1708

                                                                        
Query: 493  ggtagcaccgattcagtcacgttatagcctccgtcaggatccaccaccctgatgtacgtc 552
            ||   ||||   ||||| || ||||||||||| || |||||||||||||||||||| |||
Sbjct: 1707 ggagccaccatctcagtgacattatagcctccatctggatccaccaccctgatgtatgtc 1648

                                                                        
Query: 553  tcctggcccgaggtaccaggtgtccagatttctccgtgcgcacgttccagaaccccgggc 612
            |||| | || || ||||| |||||||||||| || ||||| |||||||| || |||||||
Sbjct: 1647 tcct-gaccaagataccatgtgtccagattt-tcggtgcgtacgttccaaaaacccgggc 1590

                                                                        
Query: 613  tgtcgagcgacaacaggacggcggtccatgctccaggaaacaccctggagtggtgcaacg 672
            |||| || |||| ||  || || |||||||||||||| || |||   | |||||||||||
Sbjct: 1589 tgtcaagtgacagcatcacagcagtccatgctccagggaatacc--tgtgtggtgcaacg 1532

                              
Query: 673  ggaaacgccgtcccactt 690
             ||||| || ||||||||
Sbjct: 1531 agaaacaccatcccactt 1514
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>dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095A13, full
            insert sequence
          Length = 2224

 Score =  141 bits (71), Expect = 4e-30
 Identities = 214/258 (82%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 433  ccatgaggcttctgagccttttgtttttccttgaggaggccacagaagagggcgttgtct 492
            |||||||||||||||||||| ||||| |||||||||||||||||| ||||   ||| |||
Sbjct: 1768 ccatgaggcttctgagccttctgtttatccttgaggaggccacagtagagcatgttatct 1709

                                                                        
Query: 493  ggtagcaccgattcagtcacgttatagcctccgtcaggatccaccaccctgatgtacgtc 552
            ||   ||||   ||||| || ||||||||||| || |||||||||||||||||||| |||
Sbjct: 1708 ggagccaccatctcagtgacattatagcctccatctggatccaccaccctgatgtatgtc 1649

                                                                        
Query: 553  tcctggcccgaggtaccaggtgtccagatttctccgtgcgcacgttccagaaccccgggc 612
            |||| | || || ||||| |||||||||||| || ||||| |||||||| || |||||||
Sbjct: 1648 tcct-gaccaagataccatgtgtccagattt-tcggtgcgtacgttccaaaaacccgggc 1591

                                                                        
Query: 613  tgtcgagcgacaacaggacggcggtccatgctccaggaaacaccctggagtggtgcaacg 672
            |||| || |||| ||  || || |||||||||||||| || |||   | |||||||||||
Sbjct: 1590 tgtcaagtgacagcatcacagcagtccatgctccagggaatacc--tgtgtggtgcaacg 1533

                              
Query: 673  ggaaacgccgtcccactt 690
             ||||| || ||||||||
Sbjct: 1532 agaaacaccatcccactt 1515
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>gb|BT024030.1| Zea mays clone EL01N0422F01 mRNA sequence
          Length = 2246

 Score =  125 bits (63), Expect = 2e-25
 Identities = 212/258 (82%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 433  ccatgaggcttctgagccttttgtttttccttgaggaggccacagaagagggcgttgtct 492
            |||||||||||||||||||| ||||| |||||||||||||||||| ||||   |||||||
Sbjct: 1790 ccatgaggcttctgagccttctgtttatccttgaggaggccacagtagagcatgttgtct 1731

                                                                        
Query: 493  ggtagcaccgattcagtcacgttatagcctccgtcaggatccaccaccctgatgtacgtc 552
            ||   ||||   ||||| || ||||||||||| |  |||||||||||||||||||| |||
Sbjct: 1730 ggagccaccatctcagtaacattatagcctccatttggatccaccaccctgatgtaagtc 1671

                                                                        
Query: 553  tcctggcccgaggtaccaggtgtccagatttctccgtgcgcacgttccagaaccccgggc 612
            ||||| ||| || ||||| |||||||| ||| || || || || ||||| || || ||||
Sbjct: 1670 tcctgaccc-agataccacgtgtccaggttt-tctgtccgtacattccaaaatcctgggc 1613

                                                                        
Query: 613  tgtcgagcgacaacaggacggcggtccatgctccaggaaacaccctggagtggtgcaacg 672
            |||| || |||| ||  || || ||||||||||| |||||||||   |||| ||||||||
Sbjct: 1612 tgtcaagtgacagcatcacagcagtccatgctcccggaaacacc--tgagtcgtgcaacg 1555

                              
Query: 673  ggaaacgccgtcccactt 690
             ||||| || ||||||||
Sbjct: 1554 agaaacaccatcccactt 1537
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>gb|AY106062.1| Zea mays PCO084327 mRNA sequence
          Length = 1981

 Score =  125 bits (63), Expect = 2e-25
 Identities = 212/258 (82%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 433  ccatgaggcttctgagccttttgtttttccttgaggaggccacagaagagggcgttgtct 492
            |||||||||||||||||||| ||||| |||||||||||||||||| ||||   |||||||
Sbjct: 1806 ccatgaggcttctgagccttctgtttatccttgaggaggccacagtagagcatgttgtct 1747

                                                                        
Query: 493  ggtagcaccgattcagtcacgttatagcctccgtcaggatccaccaccctgatgtacgtc 552
            ||   ||||   ||||| || ||||||||||| |  |||||||||||||||||||| |||
Sbjct: 1746 ggagccaccatctcagtaacattatagcctccatttggatccaccaccctgatgtaagtc 1687

                                                                        
Query: 553  tcctggcccgaggtaccaggtgtccagatttctccgtgcgcacgttccagaaccccgggc 612
            ||||| ||| || ||||| |||||||| ||| || || || || ||||| || || ||||
Sbjct: 1686 tcctgaccc-agataccacgtgtccaggttt-tctgtccgtacattccaaaatcctgggc 1629

                                                                        
Query: 613  tgtcgagcgacaacaggacggcggtccatgctccaggaaacaccctggagtggtgcaacg 672
            |||| || |||| ||  || || ||||||||||| |||||||||   |||| ||||||||
Sbjct: 1628 tgtcaagtgacagcatcacagcagtccatgctcccggaaacacc--tgagtcgtgcaacg 1571

                              
Query: 673  ggaaacgccgtcccactt 690
             ||||| || ||||||||
Sbjct: 1570 agaaacaccatcccactt 1553
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  103 bits (52), Expect = 8e-19
 Identities = 162/196 (82%), Gaps = 2/196 (1%)
 Strand = Plus / Plus

                                                                          
Query: 454    tgtttttccttgaggaggccacagaagagggcgttgtctggtagcaccgattcagtcacg 513
              ||||| |||||||||||||||||| ||||   ||| |||||   ||||   ||||| || 
Sbjct: 296906 tgtttatccttgaggaggccacagtagagcatgttatctggagccaccatctcagtgaca 296965

                                                                          
Query: 514    ttatagcctccgtcaggatccaccaccctgatgtacgtctcctggcccgaggtaccaggt 573
              ||||||||||| || |||||||||||||||||||| ||||||| | || || ||||| ||
Sbjct: 296966 ttatagcctccatctggatccaccaccctgatgtatgtctcct-gaccaagataccatgt 297024

                                                                          
Query: 574    gtccagatttctccgtgcgcacgttccagaaccccgggctgtcgagcgacaacaggacgg 633
              |||||||||| || ||||| |||||||| || ||||||||||| || |||| ||  || |
Sbjct: 297025 gtccagattt-tcggtgcgtacgttccaaaaacccgggctgtcaagtgacagcatcacag 297083

                              
Query: 634    cggtccatgctccagg 649
              | ||||||||||||||
Sbjct: 297084 cagtccatgctccagg 297099
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0075G19
          Length = 163558

 Score =  103 bits (52), Expect = 8e-19
 Identities = 162/196 (82%), Gaps = 2/196 (1%)
 Strand = Plus / Plus

                                                                          
Query: 454    tgtttttccttgaggaggccacagaagagggcgttgtctggtagcaccgattcagtcacg 513
              ||||| |||||||||||||||||| ||||   ||| |||||   ||||   ||||| || 
Sbjct: 161802 tgtttatccttgaggaggccacagtagagcatgttatctggagccaccatctcagtgaca 161861

                                                                          
Query: 514    ttatagcctccgtcaggatccaccaccctgatgtacgtctcctggcccgaggtaccaggt 573
              ||||||||||| || |||||||||||||||||||| ||||||| | || || ||||| ||
Sbjct: 161862 ttatagcctccatctggatccaccaccctgatgtatgtctcct-gaccaagataccatgt 161920

                                                                          
Query: 574    gtccagatttctccgtgcgcacgttccagaaccccgggctgtcgagcgacaacaggacgg 633
              |||||||||| || ||||| |||||||| || ||||||||||| || |||| ||  || |
Sbjct: 161921 gtccagattt-tcggtgcgtacgttccaaaaacccgggctgtcaagtgacagcatcacag 161979

                              
Query: 634    cggtccatgctccagg 649
              | ||||||||||||||
Sbjct: 161980 cagtccatgctccagg 161995
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0644B06
          Length = 194509

 Score =  103 bits (52), Expect = 8e-19
 Identities = 162/196 (82%), Gaps = 2/196 (1%)
 Strand = Plus / Plus

                                                                        
Query: 454  tgtttttccttgaggaggccacagaagagggcgttgtctggtagcaccgattcagtcacg 513
            ||||| |||||||||||||||||| ||||   ||| |||||   ||||   ||||| || 
Sbjct: 6859 tgtttatccttgaggaggccacagtagagcatgttatctggagccaccatctcagtgaca 6918

                                                                        
Query: 514  ttatagcctccgtcaggatccaccaccctgatgtacgtctcctggcccgaggtaccaggt 573
            ||||||||||| || |||||||||||||||||||| ||||||| | || || ||||| ||
Sbjct: 6919 ttatagcctccatctggatccaccaccctgatgtatgtctcct-gaccaagataccatgt 6977

                                                                        
Query: 574  gtccagatttctccgtgcgcacgttccagaaccccgggctgtcgagcgacaacaggacgg 633
            |||||||||| || ||||| |||||||| || ||||||||||| || |||| ||  || |
Sbjct: 6978 gtccagattt-tcggtgcgtacgttccaaaaacccgggctgtcaagtgacagcatcacag 7036

                            
Query: 634  cggtccatgctccagg 649
            | ||||||||||||||
Sbjct: 7037 cagtccatgctccagg 7052
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>gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, complete sequence
          Length = 181471

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 230   gcaaataatggcaggacctct 250
             |||||||||||||||||||||
Sbjct: 21145 gcaaataatggcaggacctct 21165
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>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence
          Length = 214995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   ctgagccttttgtttttcctt 464
             |||||||||||||||||||||
Sbjct: 15539 ctgagccttttgtttttcctt 15559
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   ctgagccttttgtttttcctt 464
             |||||||||||||||||||||
Sbjct: 78059 ctgagccttttgtttttcctt 78039
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>gb|AC007730.3| Arabidopsis thaliana chromosome 2 BAC T5M2 genomic sequence, complete
            sequence
          Length = 94302

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   aacaagtatccaagtcttgtt 60
            |||||||||||||||||||||
Sbjct: 6202 aacaagtatccaagtcttgtt 6222
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>gb|AC007143.5| Arabidopsis thaliana chromosome 2 BAC T17H1 genomic sequence, complete
             sequence
          Length = 75812

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    aacaagtatccaagtcttgtt 60
             |||||||||||||||||||||
Sbjct: 45478 aacaagtatccaagtcttgtt 45458
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>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     aacaagtatccaagtcttgtt 60
              |||||||||||||||||||||
Sbjct: 228906 aacaagtatccaagtcttgtt 228926
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>dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-634B22, complete
             sequence
          Length = 178169

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 230   gcaaataatggcaggacctct 250
             |||||||||||||||||||||
Sbjct: 49009 gcaaataatggcaggacctct 49029
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>emb|X91201.1|MTATRT1 A.thaliana mitochondrial DNA for TY1/copia-like retrotransposon
           (RT1)
          Length = 1418

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 40  aacaagtatccaagtcttgtt 60
           |||||||||||||||||||||
Sbjct: 269 aacaagtatccaagtcttgtt 249
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>ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion binding AT5G48450 (SKS3) mRNA,
            complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 629  gacggcggtccatgctccaggaaacacc 656
            |||||| |||||||| ||||||||||||
Sbjct: 1473 gacggccgtccatgcaccaggaaacacc 1446
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>ref|XM_754534.1| Ustilago maydis 521 hypothetical protein (UM03480.1) partial mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 413 aagccgagctcgacgacgac 432
           ||||||||||||||||||||
Sbjct: 124 aagccgagctcgacgacgac 105
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>gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosome 18, complete sequence
          Length = 187634

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 645    ccaggaaacaccctggagtg 664
              ||||||||||||||||||||
Sbjct: 151337 ccaggaaacaccctggagtg 151318
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>gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, complete sequence
          Length = 198604

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   acagaagagggcgttgtctg 493
             ||||||||||||||||||||
Sbjct: 52095 acagaagagggcgttgtctg 52114
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>emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on chromosome 9 Contains the 5'
              end of gene DKFZp434G2311, a novel gene, the GDBR1 gene for
              putative glialblastoma cell differentiation-related, 3' end
              of gene MGC23427 and five CpG islands, complete sequence
          Length = 139653

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     acaggaacaggacagggcta 82
              ||||||||||||||||||||
Sbjct: 112408 acaggaacaggacagggcta 112427
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    agccgagctcgacgacgacc 433
              ||||||||||||||||||||
Sbjct: 297564 agccgagctcgacgacgacc 297583
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>emb|BX942836.11| Zebrafish DNA sequence from clone CH211-61G16 in linkage group 5,
             complete sequence
          Length = 168608

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   acaactctgttaacaagttt 211
             ||||||||||||||||||||
Sbjct: 61861 acaactctgttaacaagttt 61880
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>emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in linkage group 17,
             complete sequence
          Length = 86811

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   tttgtttttccttgaggagg 471
             ||||||||||||||||||||
Sbjct: 81754 tttgtttttccttgaggagg 81773
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>gb|S69352.1| Mus musculus BRN-3c (Brn-3c) gene, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 645  ccaggaaacaccctggagtg 664
            ||||||||||||||||||||
Sbjct: 1577 ccaggaaacaccctggagtg 1558
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>dbj|AK039639.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330076M02 product:POU domain, class 4,
            transcription factor 3, full insert sequence
          Length = 2178

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 645  ccaggaaacaccctggagtg 664
            ||||||||||||||||||||
Sbjct: 1037 ccaggaaacaccctggagtg 1018
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 390      gcggctctgtcttaccgcggggga 413
                |||| |||||||||||||||||||
Sbjct: 19189057 gcggttctgtcttaccgcggggga 19189080



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 448      gccttttgtttttccttgag 467
                ||||||||||||||||||||
Sbjct: 10183181 gccttttgtttttccttgag 10183200
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>dbj|AB040765.2| Mus musculus Polk gene for DNA polymerase kappa, complete cds
          Length = 11633

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  acagaagagggcgttgtctg 493
            ||||||||||||||||||||
Sbjct: 7351 acagaagagggcgttgtctg 7332
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>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence
          Length = 224605

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   gtaccaggtgtccagatttc 584
             ||||||||||||||||||||
Sbjct: 57687 gtaccaggtgtccagatttc 57706
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    ggaagccgagctcgacgacg 430
              ||||||||||||||||||||
Sbjct: 907416 ggaagccgagctcgacgacg 907397
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>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence
          Length = 197232

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    acaactctgttaacaagttt 211
              ||||||||||||||||||||
Sbjct: 161128 acaactctgttaacaagttt 161147
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>dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7
          Length = 74298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 629   gacggcggtccatgctccaggaaacacc 656
             |||||| |||||||| ||||||||||||
Sbjct: 28894 gacggccgtccatgcaccaggaaacacc 28921
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>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0023I13
          Length = 165911

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    gccttttgtttttccttgag 467
              ||||||||||||||||||||
Sbjct: 142527 gccttttgtttttccttgag 142546
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>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0086F04
          Length = 163579

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 390    gcggctctgtcttaccgcggggga 413
              |||| |||||||||||||||||||
Sbjct: 111422 gcggttctgtcttaccgcggggga 111445
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>emb|AL928954.9| Zebrafish DNA sequence from clone CH211-127D4 in linkage group 5,
              complete sequence
          Length = 222888

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    acaactctgttaacaagttt 211
              ||||||||||||||||||||
Sbjct: 125760 acaactctgttaacaagttt 125741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,921,187
Number of Sequences: 3902068
Number of extensions: 4921187
Number of successful extensions: 89437
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89242
Number of HSP's gapped (non-prelim): 179
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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