ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3e18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA 426 e-116
2dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
3gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence 367 3e-98
4gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence 317 2e-83
5ref|NM_187618.1| Oryza sativa (japonica cultivar-group), predic... 250 4e-63
6dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
8dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
9dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 167 5e-38
11gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 167 5e-38
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
13gb|AY111369.1| Zea mays CL858_1 mRNA sequence 98 4e-17
14gb|AY389774.1| Hyacinthus orientalis coatomer protein gamma subu... 94 6e-16
15gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete... 44 0.49
16gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24... 44 0.49
17ref|NM_119610.2| Arabidopsis thaliana clathrin binding AT4G34450... 42 1.9
18emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ... 42 1.9
19emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, B... 42 1.9
20emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.9
21dbj|AK221839.1| Arabidopsis thaliana mRNA for Nonclathrin coat p... 42 1.9
22gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 1.9
23dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
24emb|AL929109.5| Zebrafish DNA sequence from clone CH211-134D6, c... 42 1.9
25dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
26dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
27gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 1.9
28dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.9
29gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 40 7.6
30gb|AC008092.4| Drosophila melanogaster clone BACR22F22, complete... 40 7.6
31gb|AY544051.1| Salmo salar clone Rsa473 microsatellite sequence 40 7.6
32gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, comp... 40 7.6
33gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, comple... 40 7.6
34gb|AC074230.31| Mus musculus strain 129/Sv clone ct7-596k8b map ... 40 7.6
35gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete s... 40 7.6
36emb|AL162613.22| Human DNA sequence from clone RP11-182C2 on chr... 40 7.6
37gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Ho... 40 7.6
38emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 7.6
39emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 i... 40 7.6
40gb|BC091386.1| Rattus norvegicus hypothetical protein LOC310665,... 40 7.6
41gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, comp... 40 7.6
42gb|AC015845.8| Homo sapiens chromosome 17, clone RP11-343K8, com... 40 7.6
43gb|AC099064.2| Homo sapiens chromosome 1 clone RP4-754K5, comple... 40 7.6
44gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, comple... 40 7.6
45gb|AC008442.6| Homo sapiens chromosome 5 clone CTC-331P4, comple... 40 7.6
46ref|NM_001025118.1| Rattus norvegicus hypothetical protein LOC31... 40 7.6
47gb|DQ067593.1| Cocksfoot streak virus isolate UK-1-04 GHCP619C H... 40 7.6
48gb|DQ067592.1| Cocksfoot streak virus isolate UK-1-04 GHCP619B H... 40 7.6
49gb|DQ067591.1| Cocksfoot streak virus isolate UK-1-04 GHCP619A H... 40 7.6
50dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 7.6
51emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on ch... 40 7.6
52gb|AY235127.1| Meleagris gallopavo clone MNT-158 microsatellite ... 40 7.6
53emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in... 40 7.6
54gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, r... 40 7.6
55gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complet... 40 7.6
56emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, ... 40 7.6
57emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 i... 40 7.6
58emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 7.6
59emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 i... 40 7.6
60emb|CT025771.7| Zebrafish DNA sequence from clone DKEY-20I10 in ... 40 7.6
61gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14... 40 7.6
62gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complet... 40 7.6
63emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on ch... 40 7.6
64emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 40 7.6 
>ref|XM_477026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score =  426 bits (215), Expect = e-116
 Identities = 360/409 (88%)
 Strand = Plus / Minus

                                                                        
Query: 153  tttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatctga 212
            |||||||||||||||| |||||||||||| |||  |||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 213  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 272
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                                                                        
Query: 273  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 332
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 2780 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 2721

                                                                        
Query: 333  ggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcacag 392
            |||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 2720 ggaccacatcagttccctcgcagggctgcatgccaaggatgcctatgacagcactcacag 2661

                                                                        
Query: 393  cctcagccaagttctccctaacaccaagtccatactcatcgacccgctcactttctggat 452
            ||||||||| | | |||||  | ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 2660 cctcagccaggctttccctggcgccaagcccatactcatcaacccgctcgctttctggat 2601

                                                                        
Query: 453  ccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatcagcag 512
            ||||||||||||||||||||| |||||| ||||| || ||||||||||| ||||||||||
Sbjct: 2600 ccatgctttcccaagcatttctgaagttagaaactccaaccttcaacatataatcagcag 2541

                                                             
Query: 513  aaataatttcaaaatcttctagctgatactcatcctcaacaccgtcatc 561
            || ||||||| | |||||| ||||| |||||||||||||| || |||||
Sbjct: 2540 aagtaatttccagatcttcaagctggtactcatcctcaacgccatcatc 2492
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>dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B12, full
            insert sequence
          Length = 3193

 Score =  418 bits (211), Expect = e-114
 Identities = 359/409 (87%)
 Strand = Plus / Minus

                                                                        
Query: 153  tttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatctga 212
            |||||||||||||||| |||||||||||| |||  |||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 213  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 272
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                                                                        
Query: 273  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 332
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 2780 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 2721

                                                                        
Query: 333  ggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcacag 392
            |||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 2720 ggaccacatcagttccctcgcagggctgcatgccaaggatgcctatgacagcactcacag 2661

                                                                        
Query: 393  cctcagccaagttctccctaacaccaagtccatactcatcgacccgctcactttctggat 452
            ||||||||| | | |||||  | ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 2660 cctcagccaggctttccctggcgccaagcccatactcatcaacccgctcgctttctggat 2601

                                                                        
Query: 453  ccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatcagcag 512
            ||||||||||||||||||||| |||||| ||||| || ||||||||||| ||||||||||
Sbjct: 2600 ccatgctttcccaagcatttctgaagttagaaactccaaccttcaacatataatcagcag 2541

                                                             
Query: 513  aaataatttcaaaatcttctagctgatactcatcctcaacaccgtcatc 561
            || ||||||| | |||||| ||||| |||| ||||||||| || |||||
Sbjct: 2540 aagtaatttccagatcttcaagctggtacttatcctcaacgccatcatc 2492
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>gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence
          Length = 1125

 Score =  367 bits (185), Expect = 3e-98
 Identities = 354/411 (86%)
 Strand = Plus / Minus

                                                                       
Query: 151 gttttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatct 210
           |||||||||||| || |||||||| ||||||||||  |||| ||| |||||||| |||||
Sbjct: 960 gttttagccattagcgacaatttcgtggatcctgtcactgatctctggatcatcagatct 901

                                                                       
Query: 211 gacagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaa 270
            || || |||||||||||||| || |||||  | || ||||||||||| |||||||||||
Sbjct: 900 aactgccagcttcatggccacctccttcggtgcactaattccaaatgacagtctcaccaa 841

                                                                       
Query: 271 aactttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtt 330
            |||||||| || || || |||||||| || ||||| ||||||||||| || |||||| |
Sbjct: 840 gactttcacgttgccaataaacacaccagagagcagacaagtgtgcgaccttgaattgct 781

                                                                       
Query: 331 ttggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcac 390
           | |||| || || |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 780 tgggaccacgtcagttccctcacaaggctgcatgccaaggatgcttataacagcacttac 721

                                                                       
Query: 391 agcctcagccaagttctccctaacaccaagtccatactcatcgacccgctcactttctgg 450
           ||||||||||||| ||||||| || ||||| |||||||| || || |||||| | |||||
Sbjct: 720 agcctcagccaagctctcccttactccaagcccatactcgtcaactcgctcagtctctgg 661

                                                                       
Query: 451 atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatcagc 510
           ||||||| ||||||| |||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 660 atccatgttttcccaggcatttcggaagttagatactcccaccttcaacatataatcagc 601

                                                              
Query: 511 agaaataatttcaaaatcttctagctgatactcatcctcaacaccgtcatc 561
           |||||  ||||||| |||||| ||||| ||||||||||| ||||| |||||
Sbjct: 600 agaaacgatttcaagatcttcaagctggtactcatcctcgacaccatcatc 550
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>gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence
          Length = 886

 Score =  317 bits (160), Expect = 2e-83
 Identities = 335/394 (85%)
 Strand = Plus / Minus

                                                                       
Query: 168 caatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttcatgg 227
           ||||||| |||||| |||  |||| ||| |||||||| ||||| || || || |||||||
Sbjct: 679 caatttcgtggatcttgtcactgagctctggatcatcagatctaactgccaggttcatgg 620

                                                                       
Query: 228 ccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacattaccga 287
           |||| || |||||  | ||||||||||| || ||||||||||| |||||||| || || |
Sbjct: 619 ccacctccttcggggcactgattccaaaggaaagtctcaccaagactttcacgttgccaa 560

                                                                       
Query: 288 tgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcggttc 347
           | | ||| || || ||||| ||||||||||| || |||||| || |||| || || || |
Sbjct: 559 taaccaccccagagagcagacaagtgtgcgaccttgaattgcttgggaccacgtcagtcc 500

                                                                       
Query: 348 cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
           |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 499 cctcacaaggctgcatgccaaggatgcttataacagcacttacagcctcagccaagctct 440

                                                                       
Query: 408 ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
           |||| || ||||| ||||||||||| || |||||| | |||||||||||| ||||||| |
Sbjct: 439 cccttactccaagcccatactcatcaactcgctcagtctctggatccatgttttcccagg 380

                                                                       
Query: 468 catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
           ||||||||||||| || || |||||||||||||| |||||||||||||  || |||| ||
Sbjct: 379 catttcggaagttagatactcccaccttcaacatataatcagcagaaactatctcaagat 320

                                             
Query: 528 cttctagctgatactcatcctcaacaccgtcatc 561
           |||| ||||| ||||||||||||||||| |||||
Sbjct: 319 cttcaagctggtactcatcctcaacaccatcatc 286
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>ref|NM_187618.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score =  250 bits (126), Expect = 4e-63
 Identities = 325/392 (82%)
 Strand = Plus / Minus

                                                                        
Query: 164  gcaacaatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttc 223
            |||||||| || |||||| |||  ||||| || ||||||||||| ||||| || ||||||
Sbjct: 2471 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2412

                                                                        
Query: 224  atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 283
            || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 2411 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 2352

                                                                        
Query: 284  ccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcg 343
            |||||||||||||| || |||||||||||||||||||| | ||| ||| | ||||| || 
Sbjct: 2351 ccgatgaacacaccagacagcaggcaagtgtgcgatcttgcattctttggtacaacctca 2292

                                                                        
Query: 344  gttccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaag 403
            || ||||| ||||||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct: 2291 gtgccctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaag 2232

                                                                        
Query: 404  ttctccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcc 463
             |||| |||||||||||||||||||||||||| |||||||||||||| |||||  |||||
Sbjct: 2231 ctctctctaacaccaagtccatactcatcgacacgctcactttctgggtccatattttcc 2172

                                                                        
Query: 464  caagcatttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttca 523
            || ||||| | |||||| || ||  | ||| ||| |||||||||||| |||| |||||| 
Sbjct: 2171 caggcattcctgaagttggagactgcaaccctcagcatgtaatcagccgaaacaatttcc 2112

                                            
Query: 524  aaatcttctagctgatactcatcctcaacacc 555
            |  ||||| | ||| || |||||||| |||||
Sbjct: 2111 aggtcttcgatctggtattcatcctccacacc 2080
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>dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G01, full
            insert sequence
          Length = 3214

 Score =  250 bits (126), Expect = 4e-63
 Identities = 325/392 (82%)
 Strand = Plus / Minus

                                                                        
Query: 164  gcaacaatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttc 223
            |||||||| || |||||| |||  ||||| || ||||||||||| ||||| || ||||||
Sbjct: 2825 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2766

                                                                        
Query: 224  atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 283
            || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 2765 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 2706

                                                                        
Query: 284  ccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcg 343
            |||||||||||||| || |||||||||||||||||||| | ||| ||| | ||||| || 
Sbjct: 2705 ccgatgaacacaccagacagcaggcaagtgtgcgatcttgcattctttggtacaacctca 2646

                                                                        
Query: 344  gttccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaag 403
            || ||||| ||||||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct: 2645 gtgccctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaag 2586

                                                                        
Query: 404  ttctccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcc 463
             |||| |||||||||||||||||||||||||| |||||||||||||| |||||  |||||
Sbjct: 2585 ctctctctaacaccaagtccatactcatcgacacgctcactttctgggtccatattttcc 2526

                                                                        
Query: 464  caagcatttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttca 523
            || ||||| | |||||| || ||  | ||| ||| |||||||||||| |||| |||||| 
Sbjct: 2525 caggcattcctgaagttggagactgcaaccctcagcatgtaatcagccgaaacaatttcc 2466

                                            
Query: 524  aaatcttctagctgatactcatcctcaacacc 555
            |  ||||| | ||| || |||||||| |||||
Sbjct: 2465 aggtcttcgatctggtattcatcctccacacc 2434
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  234 bits (118), Expect = 3e-58
 Identities = 190/214 (88%)
 Strand = Plus / Minus

                                                                           
Query: 348     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
               ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| | | |
Sbjct: 5490995 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 5490936

                                                                           
Query: 408     ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
               ||||  | ||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 5490935 ccctggcgccaagcccatactcatcaacccgctcgctttctggatccatgctttcccaag 5490876

                                                                           
Query: 468     catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
               |||||| |||||| ||||| || ||||||||||| |||||||||||| ||||||| | ||
Sbjct: 5490875 catttctgaagttagaaactccaaccttcaacatataatcagcagaagtaatttccagat 5490816

                                                 
Query: 528     cttctagctgatactcatcctcaacaccgtcatc 561
               |||| ||||| |||||||||||||| || |||||
Sbjct: 5490815 cttcaagctggtactcatcctcaacgccatcatc 5490782



 Score =  198 bits (100), Expect = 1e-47
 Identities = 173/198 (87%)
 Strand = Plus / Minus

                                                                           
Query: 153     tttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatctga 212
               |||||||||||||||| |||||||||||| |||  |||| ||| ||||||||||||||||
Sbjct: 5491408 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 5491349

                                                                           
Query: 213     cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 272
               | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 5491348 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 5491289

                                                                           
Query: 273     ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 332
               |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 5491288 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 5491229

                                 
Query: 333     ggacaacatcggttccct 350
               |||| ||||| |||||||
Sbjct: 5491228 ggaccacatcagttccct 5491211
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0081K20
          Length = 117287

 Score =  234 bits (118), Expect = 3e-58
 Identities = 190/214 (88%)
 Strand = Plus / Minus

                                                                        
Query: 348  cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
            ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| | | |
Sbjct: 4080 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 4021

                                                                        
Query: 408  ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
            ||||  | ||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 4020 ccctggcgccaagcccatactcatcaacccgctcgctttctggatccatgctttcccaag 3961

                                                                        
Query: 468  catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
            |||||| |||||| ||||| || ||||||||||| |||||||||||| ||||||| | ||
Sbjct: 3960 catttctgaagttagaaactccaaccttcaacatataatcagcagaagtaatttccagat 3901

                                              
Query: 528  cttctagctgatactcatcctcaacaccgtcatc 561
            |||| ||||| |||||||||||||| || |||||
Sbjct: 3900 cttcaagctggtactcatcctcaacgccatcatc 3867



 Score =  198 bits (100), Expect = 1e-47
 Identities = 173/198 (87%)
 Strand = Plus / Minus

                                                                        
Query: 153  tttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatctga 212
            |||||||||||||||| |||||||||||| |||  |||| ||| ||||||||||||||||
Sbjct: 4493 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 4434

                                                                        
Query: 213  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 272
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 4433 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 4374

                                                                        
Query: 273  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 332
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 4373 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 4314

                              
Query: 333  ggacaacatcggttccct 350
            |||| ||||| |||||||
Sbjct: 4313 ggaccacatcagttccct 4296
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score =  234 bits (118), Expect = 3e-58
 Identities = 190/214 (88%)
 Strand = Plus / Minus

                                                                          
Query: 348    cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
              ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| | | |
Sbjct: 124976 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 124917

                                                                          
Query: 408    ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
              ||||  | ||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 124916 ccctggcgccaagcccatactcatcaacccgctcgctttctggatccatgctttcccaag 124857

                                                                          
Query: 468    catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
              |||||| |||||| ||||| || ||||||||||| |||||||||||| ||||||| | ||
Sbjct: 124856 catttctgaagttagaaactccaaccttcaacatataatcagcagaagtaatttccagat 124797

                                                
Query: 528    cttctagctgatactcatcctcaacaccgtcatc 561
              |||| ||||| |||||||||||||| || |||||
Sbjct: 124796 cttcaagctggtactcatcctcaacgccatcatc 124763



 Score =  198 bits (100), Expect = 1e-47
 Identities = 173/198 (87%)
 Strand = Plus / Minus

                                                                          
Query: 153    tttagccatttgcaacaatttcatggatcctgtnnctgacctccggatcatctgatctga 212
              |||||||||||||||| |||||||||||| |||  |||| ||| ||||||||||||||||
Sbjct: 125389 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 125330

                                                                          
Query: 213    cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 272
              | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 125329 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 125270

                                                                          
Query: 273    ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 332
              |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 125269 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 125210

                                
Query: 333    ggacaacatcggttccct 350
              |||| ||||| |||||||
Sbjct: 125209 ggaccacatcagttccct 125192
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  167 bits (84), Expect = 5e-38
 Identities = 177/208 (85%)
 Strand = Plus / Minus

                                                                           
Query: 348     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
               |||| ||||||||||| |||||||| || || |||||||||||||||||||||||| |||
Sbjct: 6651423 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 6651364

                                                                           
Query: 408     ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
               | |||||||||||||||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 6651363 ctctaacaccaagtccatactcatcgacacgctcactttctgggtccatattttcccagg 6651304

                                                                           
Query: 468     catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
               |||| | |||||| || ||  | ||| ||| |||||||||||| |||| |||||| |  |
Sbjct: 6651303 cattcctgaagttggagactgcaaccctcagcatgtaatcagccgaaacaatttccaggt 6651244

                                           
Query: 528     cttctagctgatactcatcctcaacacc 555
               |||| | ||| || |||||||| |||||
Sbjct: 6651243 cttcgatctggtattcatcctccacacc 6651216



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                           
Query: 164     gcaacaatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttc 223
               |||||||| || |||||| |||  ||||| || ||||||||||| ||||| || ||||||
Sbjct: 6651732 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6651673

                                                                           
Query: 224     atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 283
               || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 6651672 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 6651613

                                                     
Query: 284     ccgatgaacacacctgaaagcaggcaagtgtgcgatct 321
               |||||||||||||| || ||||||||||||||||||||
Sbjct: 6651612 ccgatgaacacaccagacagcaggcaagtgtgcgatct 6651575
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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
             complete sequence
          Length = 127946

 Score =  167 bits (84), Expect = 5e-38
 Identities = 177/208 (85%)
 Strand = Plus / Minus

                                                                         
Query: 348   cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
             |||| ||||||||||| |||||||| || || |||||||||||||||||||||||| |||
Sbjct: 36971 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 36912

                                                                         
Query: 408   ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
             | |||||||||||||||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 36911 ctctaacaccaagtccatactcatcgacacgctcactttctgggtccatattttcccagg 36852

                                                                         
Query: 468   catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
             |||| | |||||| || ||  | ||| ||| |||||||||||| |||| |||||| |  |
Sbjct: 36851 cattcctgaagttggagactgcaaccctcagcatgtaatcagccgaaacaatttccaggt 36792

                                         
Query: 528   cttctagctgatactcatcctcaacacc 555
             |||| | ||| || |||||||| |||||
Sbjct: 36791 cttcgatctggtattcatcctccacacc 36764



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                         
Query: 164   gcaacaatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttc 223
             |||||||| || |||||| |||  ||||| || ||||||||||| ||||| || ||||||
Sbjct: 37280 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 37221

                                                                         
Query: 224   atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 283
             || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 37220 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 37161

                                                   
Query: 284   ccgatgaacacacctgaaagcaggcaagtgtgcgatct 321
             |||||||||||||| || ||||||||||||||||||||
Sbjct: 37160 ccgatgaacacaccagacagcaggcaagtgtgcgatct 37123
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  167 bits (84), Expect = 5e-38
 Identities = 177/208 (85%)
 Strand = Plus / Minus

                                                                           
Query: 348     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttct 407
               |||| ||||||||||| |||||||| || || |||||||||||||||||||||||| |||
Sbjct: 6650636 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 6650577

                                                                           
Query: 408     ccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaag 467
               | |||||||||||||||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 6650576 ctctaacaccaagtccatactcatcgacacgctcactttctgggtccatattttcccagg 6650517

                                                                           
Query: 468     catttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaat 527
               |||| | |||||| || ||  | ||| ||| |||||||||||| |||| |||||| |  |
Sbjct: 6650516 cattcctgaagttggagactgcaaccctcagcatgtaatcagccgaaacaatttccaggt 6650457

                                           
Query: 528     cttctagctgatactcatcctcaacacc 555
               |||| | ||| || |||||||| |||||
Sbjct: 6650456 cttcgatctggtattcatcctccacacc 6650429



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                           
Query: 164     gcaacaatttcatggatcctgtnnctgacctccggatcatctgatctgacagctagcttc 223
               |||||||| || |||||| |||  ||||| || ||||||||||| ||||| || ||||||
Sbjct: 6650945 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6650886

                                                                           
Query: 224     atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 283
               || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 6650885 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 6650826

                                                     
Query: 284     ccgatgaacacacctgaaagcaggcaagtgtgcgatct 321
               |||||||||||||| || ||||||||||||||||||||
Sbjct: 6650825 ccgatgaacacaccagacagcaggcaagtgtgcgatct 6650788
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>gb|AY111369.1| Zea mays CL858_1 mRNA sequence
          Length = 1437

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 169/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 347  ccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcagccaagttc 406
            ||||| || |||||||| ||||||||  | || |||||| | ||||||||||||||  | 
Sbjct: 1014 ccctcacacggctgcattccaaggatattaatgacagcattgacagcctcagccaaactt 955

                                                                        
Query: 407  tccctaacaccaagtccatactcatcgacccgctcactttctggatccatgctttcccaa 466
            || ||||| || ||||||||||||||||| |||||||| ||||| |||||  ||||||| 
Sbjct: 954  tctctaaccccgagtccatactcatcgacacgctcactatctgggtccatattttcccag 895

                                                                        
Query: 467  gcatttcggaagttcgaaacccccaccttcaacatgtaatcagcagaaataatttcaaaa 526
            || || | |||||| || ||  | ||| ||| ||| |||||||| |||| ||||||||| 
Sbjct: 894  gcgttcctgaagttggagacaacaaccctcagcatataatcagctgaaacaatttcaaag 835

                                         
Query: 527  tcttctagctgatactcatcctcaacacc 555
            || |||| ||| || |||||||| |||||
Sbjct: 834  tcctctaactggtattcatcctccacacc 806



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 200  tcatctgatctgacagctagcttcatggccacttctttcggcccgctgattccaaatga 258
            ||||||||||| |||||||  ||||| |||||||| || |||||||| | |||||||||
Sbjct: 1161 tcatctgatctcacagctaatttcattgccacttcgttgggcccgctcagtccaaatga 1103
to top
>gb|AY389774.1| Hyacinthus orientalis coatomer protein gamma subunit mRNA, partial
           cds
          Length = 871

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 182/227 (80%)
 Strand = Plus / Minus

                                                                       
Query: 335 acaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcc 394
           ||||| || |||||||||||||||||||||||||||||| | |  |||||| ||||||| 
Sbjct: 736 acaacttcagttccctcgcaaggctgcatgccaaggatgttaacgacagcattcacagcg 677

                                                                       
Query: 395 tcagccaagttctccctaacaccaagtccatactcatcgacccgctcactttctggatcc 454
           ||| ||||| |||| ||   ||| |||||||| ||||| || || || || ||||| |||
Sbjct: 676 tcaaccaagctctctctggtaccgagtccatattcatcaacacgttcgctctctgggtcc 617

                                                                       
Query: 455 atgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatcagcagaa 514
           || || ||||||||||||  ||| || || || ||||| |||| || ||||||||| |  
Sbjct: 616 atactgtcccaagcatttttgaaattggatactcccactttcagcacgtaatcagctgcc 557

                                                          
Query: 515 ataatttcaaaatcttctagctgatactcatcctcaacaccgtcatc 561
           |  | |||||| ||||||||||| || ||||| || ||||| |||||
Sbjct: 556 actacttcaaattcttctagctggtattcatcttcgacaccttcatc 510
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>gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete sequence
          Length = 170684

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 52     tacacatagcctatactataat 73
              ||||||||||||||||||||||
Sbjct: 126471 tacacatagcctatactataat 126450
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>gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24 of 73 of the complete
              sequence
          Length = 310108

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 52     tacacatagcctatactataat 73
              ||||||||||||||||||||||
Sbjct: 279699 tacacatagcctatactataat 279720
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>ref|NM_119610.2| Arabidopsis thaliana clathrin binding AT4G34450 mRNA, complete cds
          Length = 2969

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 451  atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
            ||||||||||||||| ||||| | ||| || || || ||||| |||| |||||||||
Sbjct: 2446 atccatgctttcccacgcattcctgaaattggagacacccactttcaccatgtaatc 2390
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>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 451    atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
              ||||||||||||||| ||||| | ||| || || || ||||| |||| |||||||||
Sbjct: 122063 atccatgctttcccacgcattcctgaaattggagacacccactttcaccatgtaatc 122007
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>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project)
          Length = 114367

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 451    atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
              ||||||||||||||| ||||| | ||| || || || ||||| |||| |||||||||
Sbjct: 113543 atccatgctttcccacgcattcctgaaattggagacacccactttcaccatgtaatc 113487
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>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 451   atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
             ||||||||||||||| ||||| | ||| || || || ||||| |||| |||||||||
Sbjct: 12374 atccatgctttcccacgcattcctgaaattggagacacccactttcaccatgtaatc 12318
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>dbj|AK221839.1| Arabidopsis thaliana mRNA for Nonclathrin coat protein gamma -like
           protein, partial cds, clone: RAFL22-03-D15
          Length = 764

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 451 atccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
           ||||||||||||||| ||||| | ||| || || || ||||| |||| |||||||||
Sbjct: 278 atccatgctttcccacgcattcctgaaattggagacacccactttcaccatgtaatc 222
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 508     agcagaaataatttcaaaatc 528
               |||||||||||||||||||||
Sbjct: 3068169 agcagaaataatttcaaaatc 3068149
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 103      tggaaagccaaaacaacaaaa 123
                |||||||||||||||||||||
Sbjct: 21750132 tggaaagccaaaacaacaaaa 21750112
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>emb|AL929109.5| Zebrafish DNA sequence from clone CH211-134D6, complete sequence
          Length = 197991

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 497    aacatgtaatcagcagaaataattt 521
              |||||||||||| ||||||||||||
Sbjct: 105450 aacatgtaatcatcagaaataattt 105426
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>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0429B05
          Length = 155024

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   tggaaagccaaaacaacaaaa 123
             |||||||||||||||||||||
Sbjct: 29715 tggaaagccaaaacaacaaaa 29695
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>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C12
          Length = 136799

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    tggaaagccaaaacaacaaaa 123
              |||||||||||||||||||||
Sbjct: 117702 tggaaagccaaaacaacaaaa 117682
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 508     agcagaaataatttcaaaatc 528
               |||||||||||||||||||||
Sbjct: 1228290 agcagaaataatttcaaaatc 1228310
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>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 112   aaaacaacaaaaaggtcaaccaaaa 136
             |||||||||||||||||||| ||||
Sbjct: 66692 aaaacaacaaaaaggtcaacaaaaa 66716
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>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    caaatgatagtctcaccaaa 271
              ||||||||||||||||||||
Sbjct: 134144 caaatgatagtctcaccaaa 134163
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>gb|AC008092.4| Drosophila melanogaster clone BACR22F22, complete sequence
          Length = 175045

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    agcagaaataatttcaaaat 527
              ||||||||||||||||||||
Sbjct: 145560 agcagaaataatttcaaaat 145541
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>gb|AY544051.1| Salmo salar clone Rsa473 microsatellite sequence
          Length = 1015

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 347 ccctcgcaaggctgcatgcc 366
           ||||||||||||||||||||
Sbjct: 252 ccctcgcaaggctgcatgcc 271
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>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence
          Length = 206573

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     tcaacgagaaaaccaacttacaca 57
              |||||||||||| |||||||||||
Sbjct: 132913 tcaacgagaaaaacaacttacaca 132890
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>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence
          Length = 200774

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    gtctcaccaaaactttcaca 280
              ||||||||||||||||||||
Sbjct: 141172 gtctcaccaaaactttcaca 141153
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>gb|AC074230.31| Mus musculus strain 129/Sv clone ct7-596k8b map 7, complete sequence
          Length = 91251

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    tcaacgagaaaaccaacttacaca 57
             |||||||||||| |||||||||||
Sbjct: 25861 tcaacgagaaaaacaacttacaca 25838
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>gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete sequence
          Length = 95118

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 452   tccatgctttcccaagcatttcggaagttcgaaacccccaccttcaacatgtaatc 507
             |||||||||||||| || || | ||| || || |||||||| ||||| ||||||||
Sbjct: 29653 tccatgctttcccatgcgttcctgaaattagacacccccactttcaatatgtaatc 29598
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>emb|AL162613.22| Human DNA sequence from clone RP11-182C2 on chromosome 10 Contains the
             5' end of the ADD3 gene for adducin 3 (gamma) and a CpG
             island, complete sequence
          Length = 79949

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 494   ttcaacatgtaatcagcagaaataattt 521
             |||||||||||||||||| ||| |||||
Sbjct: 36842 ttcaacatgtaatcagcataaaaaattt 36869
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>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aaaacaacaaaaaggtcaac 131
             ||||||||||||||||||||
Sbjct: 30996 aaaacaacaaaaaggtcaac 31015
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>emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 2/10
          Length = 313050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 aagccaaaacaacaaaaagg 126
           ||||||||||||||||||||
Sbjct: 565 aagccaaaacaacaaaaagg 584
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>emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 in linkage group 1,
             complete sequence
          Length = 159780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   acacacctgaaagcaggcaa 310
             ||||||||||||||||||||
Sbjct: 98857 acacacctgaaagcaggcaa 98876
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>gb|BC091386.1| Rattus norvegicus hypothetical protein LOC310665, mRNA (cDNA clone
           MGC:109471 IMAGE:7321358), complete cds
          Length = 2054

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 aacagcactcacagcctcag 398
           ||||||||||||||||||||
Sbjct: 950 aacagcactcacagcctcag 931
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>gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, complete sequence
          Length = 181253

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 102    atggaaagccaaaacaacaaaaaggtcaaccaaaaa 137
              ||||||||| |||| || |||||||||||| |||||
Sbjct: 156807 atggaaagcaaaaaaaaaaaaaaggtcaactaaaaa 156842
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>gb|AC015845.8| Homo sapiens chromosome 17, clone RP11-343K8, complete sequence
          Length = 191957

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   aatttcaaaatcttctagct 536
             ||||||||||||||||||||
Sbjct: 54489 aatttcaaaatcttctagct 54508
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>gb|AC099064.2| Homo sapiens chromosome 1 clone RP4-754K5, complete sequence
          Length = 135547

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    aaataatttcaaaatcttct 532
              ||||||||||||||||||||
Sbjct: 106573 aaataatttcaaaatcttct 106554
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>gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, complete sequence
          Length = 134341

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    tcagcagaaataatttcaaa 525
              ||||||||||||||||||||
Sbjct: 104778 tcagcagaaataatttcaaa 104797
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>gb|AC008442.6| Homo sapiens chromosome 5 clone CTC-331P4, complete sequence
          Length = 171937

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   agaaataatttcaaaatctt 530
             ||||||||||||||||||||
Sbjct: 19841 agaaataatttcaaaatctt 19860
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>ref|NM_001025118.1| Rattus norvegicus hypothetical protein LOC310665 (LOC310665), mRNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 aacagcactcacagcctcag 398
           ||||||||||||||||||||
Sbjct: 950 aacagcactcacagcctcag 931
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>gb|DQ067593.1| Cocksfoot streak virus isolate UK-1-04 GHCP619C HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  gcgatctcgaattgttttgg 334
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
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>gb|DQ067592.1| Cocksfoot streak virus isolate UK-1-04 GHCP619B HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  gcgatctcgaattgttttgg 334
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
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>gb|DQ067591.1| Cocksfoot streak virus isolate UK-1-04 GHCP619A HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  gcgatctcgaattgttttgg 334
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
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>dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830485N12 product:similar to Protein
           C20orf24 (Rab5-interacting protein) (RIP5) (PNAS-11)
           [Homo sapiens], full insert sequence
          Length = 2005

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ccaaaacaacaaaaaggtca 129
           ||||||||||||||||||||
Sbjct: 906 ccaaaacaacaaaaaggtca 887
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>emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on chromosome 2, complete
             sequence
          Length = 174226

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    agaaaaccaacttacacata 59
             ||||||||||||||||||||
Sbjct: 14949 agaaaaccaacttacacata 14968
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>gb|AY235127.1| Meleagris gallopavo clone MNT-158 microsatellite sequence
          Length = 1162

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 504 aatcagcagaaataatttcaaaat 527
           ||||||||||||| ||||||||||
Sbjct: 935 aatcagcagaaatcatttcaaaat 958
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>emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in linkage group 1,
              complete sequence
          Length = 183058

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    acacacctgaaagcaggcaa 310
              ||||||||||||||||||||
Sbjct: 145464 acacacctgaaagcaggcaa 145483
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>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone
             BACR11D12, complete sequence
          Length = 189596

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   agcagaaataatttcaaaat 527
             ||||||||||||||||||||
Sbjct: 25855 agcagaaataatttcaaaat 25836
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>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence
          Length = 150646

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   aacaacaaaaaggtcaacca 133
             ||||||||||||||||||||
Sbjct: 44400 aacaacaaaaaggtcaacca 44419
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>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence
          Length = 164218

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ataattaatcgaaatccctt 88
              ||||||||||||||||||||
Sbjct: 160378 ataattaatcgaaatccctt 160359
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>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6,
             complete sequence
          Length = 181060

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   aaaacaacaaaaaggtcaac 131
             ||||||||||||||||||||
Sbjct: 24478 aaaacaacaaaaaggtcaac 24459
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>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6,
             complete sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aaaacaacaaaaaggtcaac 131
             ||||||||||||||||||||
Sbjct: 11246 aaaacaacaaaaaggtcaac 11265
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>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4,
             complete sequence
          Length = 92140

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ataacagcactcacagcctc 396
             ||||||||||||||||||||
Sbjct: 74498 ataacagcactcacagcctc 74517
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>emb|CT025771.7| Zebrafish DNA sequence from clone DKEY-20I10 in linkage group 13,
             complete sequence
          Length = 190607

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ataacagcactcacagcctc 396
             ||||||||||||||||||||
Sbjct: 25665 ataacagcactcacagcctc 25684
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>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete
              sequence
          Length = 267607

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    agcagaaataatttcaaaat 527
              ||||||||||||||||||||
Sbjct: 102394 agcagaaataatttcaaaat 102375
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>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence
          Length = 131867

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    agcagaaataatttcaaaat 527
              ||||||||||||||||||||
Sbjct: 101703 agcagaaataatttcaaaat 101684
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>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete
             sequence
          Length = 163240

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccaaaacaacaaaaaggtca 129
             ||||||||||||||||||||
Sbjct: 91724 ccaaaacaacaaaaaggtca 91705
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>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
             sequence
          Length = 149807

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   aaataatttcaaaatcttct 532
             ||||||||||||||||||||
Sbjct: 59109 aaataatttcaaaatcttct 59128


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,499,780
Number of Sequences: 3902068
Number of extensions: 5499780
Number of successful extensions: 116108
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115777
Number of HSP's gapped (non-prelim): 330
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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