>CAO_ARATH (Q9MBA1) Chlorophyllide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Chlorophyll a oxygenase) (Chlorophyll b
           synthase)
          Length = 536

 Score =  172 bits (436), Expect = 9e-43
 Identities = 79/98 (80%), Positives = 90/98 (91%)
 Frame = -1

Query: 680 LHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDR 501
           LHQLHVCLPSS NKTRLLYRMSLDFAP +K++PFM  LW HFAE+VLNEDLRLVLGQQ+R
Sbjct: 438 LHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQER 497

Query: 500 MNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRLPFS 387
           M NGAN+WN PV+YDKLG+RYRLWR+AV+RG D+LPFS
Sbjct: 498 MLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPFS 535

>RAPA_SHEON (Q8EJ93) RNA polymerase-associated protein rapA (EC 3.6.1.-)|
           (ATP-dependent helicase hepA)
          Length = 968

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 674 QLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDRMN 495
           Q+H+     T + RLL         +    P  H+L+S FAE++LN    LV G +D + 
Sbjct: 608 QIHLPYLQDTAQERLLQWYHQGLNAFELTCPGGHILFSEFAEELLNV---LVGGDEDELT 664

Query: 494 NGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 396
           N  N             RY+  + A+E+G D+L
Sbjct: 665 NLLN---------HTQSRYKELKHAMEQGRDKL 688

>UN93L_ARATH (Q94AA1) UNC93-like protein|
          Length = 464

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 333 FSRAIPWLGNGSQMTRMGRLFGRASQHGCSSGQILLQIEG-LWKRSPVKRMMGTIIAI 163
           F+ +I W+G G+ +T + R    A+ HG   G ++    G  W      ++ G +I +
Sbjct: 122 FAASIIWVGQGTYLTSIAR--SHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITL 177

>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9|
          Length = 378

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 462 RHWPVPNVSSIVHSVLLAEHKPQILIQDLLSEM*PQEVHERHVLHPGCEVERHPIQEP 635
           RHWP         S+  ++  P     D+ S + P   H       GCEVER P  +P
Sbjct: 6   RHWP---------SMFKSKPHPHQWQHDINSPLLPSASHRSSPFSSGCEVERSPEPKP 54


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,280,438
Number of Sequences: 219361
Number of extensions: 2093408
Number of successful extensions: 5754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5752
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)