ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3e13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y1779_STRMU (Q8DSK3) Hypothetical RNA methyltransferase SMU.1779... 28 7.8
2O11L1_HUMAN (Q8NGX0) Olfactory receptor 11L1 28 7.8

>Y1779_STRMU (Q8DSK3) Hypothetical RNA methyltransferase SMU.1779c (EC 2.1.1.-)|
          Length = 459

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 53  ELQIKLFDERRHKAGVRTL 109
           +  I ++DERRH AGVRT+
Sbjct: 182 DYNIPVYDERRHFAGVRTI 200



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>O11L1_HUMAN (Q8NGX0) Olfactory receptor 11L1|
          Length = 322

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -2

Query: 177 FLLQY*VVLDGNRFLSSVAMQGLRVLTPALCRLSSNSF--IW--SSILPASVGQIL 22
           FLL Y + + GN  + +V  QGLR+ +P    L   SF  +W  S+ +P  +  +L
Sbjct: 31  FLLIYCLTIIGNVVIITVVSQGLRLHSPMYMFLQHLSFLEVWYTSTTVPLLLANLL 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,358,370
Number of Sequences: 219361
Number of extensions: 767833
Number of successful extensions: 1759
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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