ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 569 e-159
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 543 e-151
3ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
4emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 7e-09
5emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 70 7e-09
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme... 70 7e-09
8gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 70 7e-09
9dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
10dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
11dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
12dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
13dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
14emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 70 7e-09
15emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 62 2e-06
16emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 56 1e-04
17gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence 50 0.006
18gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 50 0.006
19emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 50 0.006
20gb|AY103590.1| Zea mays PCO098412 mRNA sequence 50 0.006
21ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 44 0.40
22emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 44 0.40
23gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 42 1.6
24emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 42 1.6
25dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, comp... 42 1.6
26ref|XM_468482.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
27emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.2
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
29gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.2
30dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
31emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 6.2 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  569 bits (287), Expect = e-159
 Identities = 417/459 (90%), Gaps = 18/459 (3%)
 Strand = Plus / Minus

                                                                        
Query: 14   ttctccaaacagtacgctcattgtggctnacgcagcaaaccacctagagctaatagttta 73
            |||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 1859 ttctccaaacagtatgctcattgtggcagacgcagcaaaccacctagagctaatagttta 1800

                                                                        
Query: 74   ttcagagtagcaatagcctggccggctgcttcacagtaaccaaaacgacaaacggaa--- 130
            |||||||||||||||||||||||||||||||||||||||||||| ||||  |||  |   
Sbjct: 1799 ttcagagtagcaatagcctggccggctgcttcacagtaaccaaa-cgacgcacgacaaca 1741

                                                                        
Query: 131  gtcagaacgaattccacagacggaacagcgacagcaaaaatcatcttatcactcgcacag 190
            ||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 1740 gtcagaacgaattacacagacggaacagcgacagcaaa--tcatcttatcactcgcacag 1683

                                                                        
Query: 191  naccgcgcc------ctcctccagagaatcctcctccgcccgccatgcgagcaggttggc 244
             | ||||||      |||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1682 caacgcgcctgtgccctcctcgagagactcctcctccgcccgccatgcgagcaggttggc 1623

                                                                        
Query: 245  aagcttgccttccttgaccagagggtggccgctctccacattctcgccctcgaagcagtg 304
            ||||||||||||||||||||||||||||||||||||||||||||||      ||||||||
Sbjct: 1622 aagcttgccttccttgaccagagggtggccgctctccacattctcg------aagcagtg 1569

                                                                        
Query: 305  gaagacggacctgggcgacccggcggagacagcaacctcttcattcgcggtaaagctctg 364
            |||||| ||||||||||||||||| |||||||||| |||||| ||||||| |||||||||
Sbjct: 1568 gaagacagacctgggcgacccggcagagacagcaagctcttcgttcgcggcaaagctctg 1509

                                                                        
Query: 365  gtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgcagtcgtatgc 424
            ||||||||||||||| ||||| || |||||||||||||| | ||||||||||||||||||
Sbjct: 1508 gtagatgaggacgccaccgcatggcagctcctgctccacaacgttgttgcagtcgtatgc 1449

                                                   
Query: 425  ctcggcgtcnagcttcttgccccaggtggcggcgtggcc 463
            ||||||||| ||||||||||||||||||||||| |||||
Sbjct: 1448 ctcggcgtcgagcttcttgccccaggtggcggcatggcc 1410
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>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  543 bits (274), Expect = e-151
 Identities = 382/413 (92%), Gaps = 8/413 (1%)
 Strand = Plus / Minus

                                                                        
Query: 52   accacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcacagta 111
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1378 accacctagagctaatagtttattcagag-agcaatagcctggccggctgcttcacagta 1320

                                                                        
Query: 112  accaaaacgacaaacgga-agtcagaacgaattccacagacggaacagcgacagcaaaaa 170
            |||||| |||||||| || ||||||||| ||||||||||| |||| ||||||||||||  
Sbjct: 1319 accaaa-cgacaaactgacagtcagaacaaattccacagatggaatagcgacagcaaa-- 1263

                                                                        
Query: 171  tcatcttatcactcgcacagnaccgcgccctcctccagagaatcctcctccgcccgccat 230
            |||| |  |||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1262 tcatgtcttcactcgcacagcaccgcgccctcttccagagaatcctcctccgcccgccat 1203

                                                                        
Query: 231  gcgagcaggttggcaagcttgccttccttgaccagagggtggccgctctccacattctcg 290
            ||||| |||||||| |||||||||||||||||||||||||||| |   | |||| |||||
Sbjct: 1202 gcgaggaggttggcgagcttgccttccttgaccagagggtggctg---tgcacactctcg 1146

                                                                        
Query: 291  ccctcgaagcagtggaagacggacctgggcgacccggcggagacagcaacctcttcattc 350
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1145 gcctcgaagcagtggaagacggacctgggcgacccggcagagacagcaacctcttcgttc 1086

                                                                        
Query: 351  gcggtaaagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttg 410
             |||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||
Sbjct: 1085 acggtaaagctctggtagatgaggacgcctccacaggggagctcctgctccacaacgttg 1026

                                                                 
Query: 411  ttgcagtcgtatgcctcggcgtcnagcttcttgccccaggtggcggcgtggcc 463
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1025 ttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcgtggcc 973
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>ref|XM_473046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 967
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 357   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13505 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 13447



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 29    gctcattgtggctnacgcagcaaaccacctagagct 64
             ||||||||||||  |||||||  |||||||||||||
Sbjct: 13891 gctcattgtggcagacgcagctgaccacctagagct 13856



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 85    aatagcctggccggctgcttcacag 109
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758
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>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1564 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1506



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1950 gctcattgtggcagacgcagctgaccacctagagct 1915



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 357      aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
                ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 24892920 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 24892862



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 29       gctcattgtggctnacgcagcaaaccacctagagct 64
                ||||||||||||  |||||||  |||||||||||||
Sbjct: 24893306 gctcattgtggcagacgcagctgaccacctagagct 24893271



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 85       aatagcctggccggctgcttcacag 109
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173
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>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine
            decarboxylase mRNA, complete cds
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 967
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>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1115 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 1057



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1501 gctcattgtggcagacgcagctgaccacctagagct 1466



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368
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>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 357  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
           insert sequence
          Length = 1217

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 357 aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
           ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 766 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 708



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 29   gctcattgtggctnacgcagcaaaccacctagagct 64
            ||||||||||||  |||||||  |||||||||||||
Sbjct: 1152 gctcattgtggcagacgcagctgaccacctagagct 1117



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 85   aatagcctggccggctgcttcacag 109
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 357    aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
              ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 154636 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 154578



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 29     gctcattgtggctnacgcagcaaaccacctagagct 64
              ||||||||||||  |||||||  |||||||||||||
Sbjct: 155022 gctcattgtggcagacgcagctgaccacctagagct 154987



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 85     aatagcctggccggctgcttcacag 109
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                        
Query: 357   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 415
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13533 aagctctggtagatgagga-gccgccacagggcagctcctgctctaccatgttgttgca 13476



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 29    gctcattgtggctnacgcagcaaaccacctagagct 64
             ||||||||||||  |||||||  |||||||||||||
Sbjct: 13919 gctcattgtggcagacgcagctgaccacctagagct 13884



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 85    aatagcctggccggctgcttcacag 109
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
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>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 356 aaagctctggtagatgaggacgcccccgcaggggagctcctgctccacga-tgttgttgc 414
           |||||||||||| ||||| |  || |||||||| |||||||||||||| | |||||| ||
Sbjct: 111 aaagctctggtaaatgagaagaccaccgcagggcagctcctgctccacaactgttgtagc 52

                                              
Query: 415 agtcgtatgcctcggcgtcnagcttcttgccccag 449
           |||| ||  ||||||| || || ||||| ||||||
Sbjct: 51  agtcataaacctcggcatcaagtttcttcccccag 17
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>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
          Length = 2057

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 390  agctcctgctccacgatgttgttgcagtc 418
            |||||||||||||| ||||||||||||||
Sbjct: 1538 agctcctgctccaccatgttgttgcagtc 1510



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 276  ctctccacattctcgccctcgaagcagtggaa 307
            |||||||| |||||||| || |||||||||||
Sbjct: 1646 ctctccacgttctcgccgtcaaagcagtggaa 1615
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>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 390 agctcctgctccacgatgttgttgcagtc 418
           |||||||||||||| ||||||||||||||
Sbjct: 540 agctcctgctccaccatgttgttgcagtc 568



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 276 ctctccacattctcgccctcgaagcagtggaa 307
           |||||||| |||||||| || |||||||||||
Sbjct: 432 ctctccacgttctcgccgtcaaagcagtggaa 463
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>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 390  agctcctgctccacgatgttgttgcagtc 418
            |||||||||||||| ||||||||||||||
Sbjct: 1358 agctcctgctccaccatgttgttgcagtc 1330



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 276  ctctccacattctcgccctcgaagcagtggaa 307
            |||||||| |||||||| || |||||||||||
Sbjct: 1466 ctctccacgttctcgccgtcaaagcagtggaa 1435
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>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 390  agctcctgctccacgatgttgttgcagtc 418
            |||||||||||||| ||||||||||||||
Sbjct: 1607 agctcctgctccaccatgttgttgcagtc 1579



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 276  ctctccacattctcgccctcgaagcagtggaa 307
            |||||||| |||||||| || |||||||||||
Sbjct: 1715 ctctccacgttctcgccgtcaaagcagtggaa 1684
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>ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0400)
           partial mRNA
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 399 tccacgatgttgttgcagtcgt 420
           ||||||||||||||||||||||
Sbjct: 88  tccacgatgttgttgcagtcgt 67
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>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 399   tccacgatgttgttgcagtcgt 420
             ||||||||||||||||||||||
Sbjct: 55310 tccacgatgttgttgcagtcgt 55331
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>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   tgccttccttgaccagagggt 270
             |||||||||||||||||||||
Sbjct: 51033 tgccttccttgaccagagggt 51053
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>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   tccagagaatcctcctccgcc 224
             |||||||||||||||||||||
Sbjct: 94892 tccagagaatcctcctccgcc 94912
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>dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, complete cds
          Length = 8881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  tccagagaatcctcctccgcc 224
            |||||||||||||||||||||
Sbjct: 4201 tccagagaatcctcctccgcc 4181
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>ref|XM_468482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  agctcctgctccacgatgtt 409
            ||||||||||||||||||||
Sbjct: 1430 agctcctgctccacgatgtt 1411
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    ctgggcgacccggcggagac 334
              ||||||||||||||||||||
Sbjct: 276909 ctgggcgacccggcggagac 276890
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      agctcctgctccacgatgtt 409
                ||||||||||||||||||||
Sbjct: 35459486 agctcctgctccacgatgtt 35459505
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    gagcaggttggcaagcttgc 252
              ||||||||||||||||||||
Sbjct: 494503 gagcaggttggcaagcttgc 494484
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   agctcctgctccacgatgtt 409
             ||||||||||||||||||||
Sbjct: 71007 agctcctgctccacgatgtt 71026
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>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tgcttcacagtaaccaaaac 119
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,141,814
Number of Sequences: 3902068
Number of extensions: 3141814
Number of successful extensions: 79224
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79085
Number of HSP's gapped (non-prelim): 133
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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