ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2p03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ010573.1|HVU010573 Hordeum vulgare chloroplast gene encoding ATP synthase CFO subunit I, exon 1 (partial) and exon 2 Length = 962 Score = 309 bits (156), Expect = 3e-81 Identities = 203/216 (93%), Gaps = 3/216 (1%) Strand = Plus / Minus Query: 12 gagcctatgcctctatcttatttattatgtc-atntttagatataccgaaacctatgtna 70 |||||||| |||||||||||||| |||||| || ||| |||||||||||||||| | | Sbjct: 769 gagcctat-cctctatcttattt-ttatgtttatatttcaatataccgaaacctatataa 712 Query: 71 gactagataaatattaagaggactcttccgcctagatnaaaatatatcatggtcagcaaa 130 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 711 gactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcagcaaa 652 Query: 131 gntgtttctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaact 190 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 651 gttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaaaact 592 Query: 191 aactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||| ||||||||||||||||||| Sbjct: 591 aactaaataaatggaaaatgaaaattaatagaattc 556 Score = 89.7 bits (45), Expect = 5e-15 Identities = 65/74 (87%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntcttttttatncataggccgncgnttcggcnttggtnaaaaaa 301 |||||||||||||||| |||||||||| |||||| || || |||||| ||||| |||||| Sbjct: 540 caaatccaaaaaatttctcttttttatacataggtcgtcgattcggcattggttaaaaaa 481 Query: 302 gggcngggggcccc 315 |||| ||| ||||| Sbjct: 480 gggcagggtgcccc 467
>emb|X02595.1|CHTAATP1 T.aestivum chloroplast gene encoding ATP synthase CF-O subunit I & III Length = 2007 Score = 272 bits (137), Expect = 7e-70 Identities = 198/216 (91%), Gaps = 4/216 (1%) Strand = Plus / Minus Query: 12 gagcctatgcctctatcttatttattatgtc-atntttagatataccgaaacctatgtna 70 |||||||| |||||||||| ||| |||||| || ||| |||||||||||||||| | | Sbjct: 1348 gagcctat-cctctatcttcttttttatgtttatatttcaatataccgaaacctatataa 1290 Query: 71 gactagataaatattaagaggactcttccgcctagatnaaaatatatcatggtcagcaaa 130 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1289 gactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcagcaaa 1230 Query: 131 gntgtttctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaact 190 | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 1229 gttgtttctttatttttatttgccct--ctttaataatttcaatttcattaagaaaaact 1172 Query: 191 aactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||| ||||||||||||||||||| Sbjct: 1171 aactaaataaatggaaaatgaaaattaatagaattc 1136 Score = 89.7 bits (45), Expect = 5e-15 Identities = 65/74 (87%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntcttttttatncataggccgncgnttcggcnttggtnaaaaaa 301 |||||||||||||||| |||||||||| |||||| || || |||||| ||||| |||||| Sbjct: 1120 caaatccaaaaaatttctcttttttatacataggtcgtcgattcggcattggttaaaaaa 1061 Query: 302 gggcngggggcccc 315 |||| ||| ||||| Sbjct: 1060 gggcagggtgcccc 1047
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 272 bits (137), Expect = 7e-70 Identities = 198/216 (91%), Gaps = 4/216 (1%) Strand = Plus / Minus Query: 12 gagcctatgcctctatcttatttattatgtc-atntttagatataccgaaacctatgtna 70 |||||||| |||||||||| ||| |||||| || ||| |||||||||||||||| | | Sbjct: 34028 gagcctat-cctctatcttcttttttatgtttatatttcaatataccgaaacctatataa 33970 Query: 71 gactagataaatattaagaggactcttccgcctagatnaaaatatatcatggtcagcaaa 130 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33969 gactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcagcaaa 33910 Query: 131 gntgtttctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaact 190 | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 33909 gttgtttctttatttttatttgccct--ctttaataatttcaatttcattaagaaaaact 33852 Query: 191 aactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||| ||||||||||||||||||| Sbjct: 33851 aactaaataaatggaaaatgaaaattaatagaattc 33816 Score = 89.7 bits (45), Expect = 5e-15 Identities = 65/74 (87%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntcttttttatncataggccgncgnttcggcnttggtnaaaaaa 301 |||||||||||||||| |||||||||| |||||| || || |||||| ||||| |||||| Sbjct: 33800 caaatccaaaaaatttctcttttttatacataggtcgtcgattcggcattggttaaaaaa 33741 Query: 302 gggcngggggcccc 315 |||| ||| ||||| Sbjct: 33740 gggcagggtgcccc 33727
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 206 bits (104), Expect = 3e-50 Identities = 159/177 (89%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||| || Sbjct: 35882 atatacccaaacttatataagactagatgaatattaagaggactcttccaactagataaa 35823 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgccct-tgagttaataatt 169 ||| ||||||||||||||||| ||||||||||||| | ||||| || | ||||||||||| Sbjct: 35822 aatctatcatggtcagcaaagttgtttctttatttgtgtttgctctgttagttaataatt 35763 Query: 170 tcaatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 35762 tcaatttcattaagaaaaactaactaaataaatggaaaataaaaattgatagaattc 35706 Score = 44.1 bits (22), Expect = 0.28 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntctttttt 266 |||||||||||||||| |||||||| Sbjct: 35690 caaatccaaaaaatttctctttttt 35666
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 206 bits (104), Expect = 3e-50 Identities = 159/177 (89%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||| || Sbjct: 35879 atatacccaaacttatataagactagatgaatattaagaggactcttccaactagataaa 35820 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgccct-tgagttaataatt 169 ||| ||||||||||||||||| ||||||||||||| | ||||| || | ||||||||||| Sbjct: 35819 aatctatcatggtcagcaaagttgtttctttatttgtgtttgctctgttagttaataatt 35760 Query: 170 tcaatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 35759 tcaatttcattaagaaaaactaactaaataaatggaaaataaaaattgatagaattc 35703 Score = 44.1 bits (22), Expect = 0.28 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntctttttt 266 |||||||||||||||| |||||||| Sbjct: 35687 caaatccaaaaaatttctctttttt 35663
>gb|BT024124.1| Zea mays clone EL01N0450D02 mRNA sequence Length = 1622 Score = 206 bits (104), Expect = 3e-50 Identities = 159/177 (89%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||| || Sbjct: 1522 atatacccaaacttatataagactagatgaatattaagaggactcttccaactagataaa 1463 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgccct-tgagttaataatt 169 ||| ||||||||||||||||| ||||||||||||| | ||||| || | ||||||||||| Sbjct: 1462 aatctatcatggtcagcaaagttgtttctttatttgtgtttgctctgttagttaataatt 1403 Query: 170 tcaatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 1402 tcaatttcattaagaaaaactaactaaataaatggaaaataaaaattgatagaattc 1346 Score = 44.1 bits (22), Expect = 0.28 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntctttttt 266 |||||||||||||||| |||||||| Sbjct: 1330 caaatccaaaaaatttctctttttt 1306
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 33531 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 33472 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 33471 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 33412 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 33411 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 33356 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 33342 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 33283 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 33282 agggcagggtgcccc 33268
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 33531 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 33472 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 33471 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 33412 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 33411 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 33356 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 33342 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 33283 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 33282 agggcagggtgcccc 33268
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 33489 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 33430 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 33429 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 33370 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 33369 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 33314 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 33300 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 33241 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 33240 agggcagggtgcccc 33226
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 147120 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 147061 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 147060 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 147001 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 147000 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 146945 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 146931 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 146872 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 146871 agggcagggtgcccc 146857
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 38814 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 38755 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 38754 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 38695 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 38694 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 38639 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 38625 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 38566 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 38565 agggcagggtgcccc 38551
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 165622 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 165563 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 165562 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 165503 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 165502 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 165447 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 165433 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 165374 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 165373 agggcagggtgcccc 165359
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 9080888 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 9080829 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 9080828 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 9080769 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 9080768 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 9080713 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 9080699 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 9080640 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 9080639 agggcagggtgcccc 9080625
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Plus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 19961070 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 19961129 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 19961130 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 19961189 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 19961190 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 19961245 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 10325386 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 10325327 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 10325326 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 10325267 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 10325266 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 10325211 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 19961259 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 19961318 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 19961319 agggcagggtgcccc 19961333 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 10325197 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 10325138 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 10325137 agggcagggtgcccc 10325123
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 24857428 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 24857369 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 24857368 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 24857309 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 24857308 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 24857253 Score = 115 bits (58), Expect = 9e-23 Identities = 101/115 (87%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 78 taaatattaagaggactcttccgcctagatnaaaatatatcatggtcagcaaagntgttt 137 ||||||||||||||||||||||| |||||| ||||| ||||||| |||||||| |||| Sbjct: 22878853 taaatattaagaggactcttccgtctagataaaaatcaatcatgggcagcaaagttgtt- 22878795 Query: 138 ctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaactaa 192 || |||| ||||||||||| |||| | | ||||||||||||||||||||||||| Sbjct: 22878794 -ttcatttgtatttgccctttagtttaaattttcaatttcattaagaaaaactaa 22878741 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/75 (82%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 24857239 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 24857180 Query: 301 agggcngggggcccc 315 || || ||| ||||| Sbjct: 24857179 agagcagggtgcccc 24857165 Score = 42.1 bits (21), Expect = 1.1 Identities = 46/55 (83%) Strand = Plus / Minus Query: 57 cgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaaa 111 ||||||| || | ||||| |||||||||||| | ||| |||| |||||||| ||| Sbjct: 33607940 cgaaacccatataagactggataaatattaataagacacttctgcctagataaaa 33607886
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 24973 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 24914 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 24913 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 24854 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 24853 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 24798 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 24784 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 24725 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 24724 agggcagggtgcccc 24710
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 18711 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 18652 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 18651 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 18592 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 18591 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 18536 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/75 (82%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 18522 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 18463 Query: 301 agggcngggggcccc 315 || || ||| ||||| Sbjct: 18462 agagcagggtgcccc 18448
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 22427 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 22368 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 22367 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 22308 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 22307 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 22252 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/75 (82%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 22238 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 22179 Query: 301 agggcngggggcccc 315 || || ||| ||||| Sbjct: 22178 agagcagggtgcccc 22164
>dbj|AK121120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F07, full insert sequence Length = 3220 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 3147 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 3088 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 3087 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 3028 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 3027 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 2972 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 2958 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 2899 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 2898 agggcagggtgcccc 2884
>dbj|AK110794.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-D06, full insert sequence Length = 1537 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 882 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 823 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 822 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 763 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 762 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 707 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 693 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 634 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 633 agggcagggtgcccc 619
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Plus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 19972346 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 19972405 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 19972406 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 19972465 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 19972466 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 19972521 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 10331425 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 10331366 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 10331365 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 10331306 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 10331305 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 10331250 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 19972535 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 19972594 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 19972595 agggcagggtgcccc 19972609 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 10331236 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 10331177 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 10331176 agggcagggtgcccc 10331162
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 204 bits (103), Expect = 1e-49 Identities = 157/176 (89%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 33463 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 33404 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 33403 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 33344 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 33343 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 33288 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 33274 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 33215 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 33214 agggcagggtgcccc 33200
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 198 bits (100), Expect = 8e-48 Identities = 158/177 (89%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||| || Sbjct: 98017 atatacccaaacttatataagactagatgaatattaagaggactcttccaactagataaa 97958 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgccct-tgagttaataatt 169 ||| ||||||||||||||||| ||||||||||||| | ||||| || | ||||||||||| Sbjct: 97957 aatctatcatggtcagcaaagttgtttctttatttgtgtttgctctgttagttaataatt 97898 Query: 170 tcaatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||| |||||||||||||||| || |||||| ||||||||| Sbjct: 97897 tcaatttcattaagaaaaacaaactaaataaatggaaaataaaaattgatagaattc 97841 Score = 44.1 bits (22), Expect = 0.28 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntctttttt 266 |||||||||||||||| |||||||| Sbjct: 97825 caaatccaaaaaatttctctttttt 97801
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 198 bits (100), Expect = 8e-48 Identities = 158/177 (89%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||| || Sbjct: 36390 atatacccaaacttatataagactagatgaatattaagaggactcttccaactagataaa 36331 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgccct-tgagttaataatt 169 ||| ||||||||||||||||| ||||||||||||| | ||||| || | ||||||||||| Sbjct: 36330 aatctatcatggtcagcaaagttgtttctttatttgtgtttgctctgttagttaataatt 36271 Query: 170 tcaatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||| |||||||||||||||| || |||||| ||||||||| Sbjct: 36270 tcaatttcattaagaaaaacaaactaaataaatggaaaataaaaattgatagaattc 36214 Score = 44.1 bits (22), Expect = 0.28 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntctttttt 266 |||||||||||||||| |||||||| Sbjct: 36198 caaatccaaaaaatttctctttttt 36174
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 33530 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 33471 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 33470 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 33411 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 || ||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 33410 cattttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 33355 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 33341 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 33282 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 33281 agggcagggtgcccc 33267
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 31778 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 31719 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 31718 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 31659 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 31658 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 31603 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 31589 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 31530 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 31529 agggcagggtgcccc 31515
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 106711 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 106652 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 106651 aatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 106592 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 106591 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 106536 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttnt-cttttttatncataggccgncgnttcggcnttggtnaaaaa 300 |||||||||||| ||| | ||||||||| |||||| || || |||||| |||| ||||| Sbjct: 106522 caaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaa 106463 Query: 301 agggcngggggcccc 315 ||||| ||| ||||| Sbjct: 106462 agggcagggtgcccc 106448
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 4363519 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 4363460 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| | |||||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 4363459 aatctgtcatgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 4363400 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 4363399 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 4363344
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 196 bits (99), Expect = 3e-47 Identities = 156/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||| || Sbjct: 66337 atataccgaaacccatataagactagataaatattaagaggactcttctgcctagataaa 66278 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| | |||||| |||||||| ||||| ||||||| ||||||||||| |||||| | ||| Sbjct: 66277 aatctgtcatgggcagcaaagttgtttttttatttgtatttgccctttagttaaaatttt 66218 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 |||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 66217 caatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 66162
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 188 bits (95), Expect = 8e-45 Identities = 155/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 19114 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 19055 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||| ||||| |||||| | ||| Sbjct: 19054 aatctatcgtgggcagcaaagttgtttttttatttgtattttccctttagttaaaatttt 18995 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 18994 gaatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 18939 Score = 56.0 bits (28), Expect = 7e-05 Identities = 63/76 (82%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntc--ttttttatncataggccgncgnttcggcnttggtnaaaa 299 |||||||||||| ||| || |||||||| |||||| || || |||||| |||| |||| Sbjct: 18925 caaatccaaaaactttctcctttttttatacataggtcgtcgattcggcattggataaaa 18866 Query: 300 aagggcngggggcccc 315 |||||| ||| ||||| Sbjct: 18865 aagggcagggtgcccc 18850
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 188 bits (95), Expect = 8e-45 Identities = 155/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 27318907 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 27318848 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||| ||||| |||||| | ||| Sbjct: 27318847 aatctatcgtgggcagcaaagttgtttttttatttgtattttccctttagttaaaatttt 27318788 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 27318787 gaatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 27318732 Score = 83.8 bits (42), Expect = 3e-13 Identities = 76/88 (86%) Strand = Plus / Plus Query: 105 gatnaaaatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaa 164 ||| ||||| |||||||| || ||||| | ||| ||||||| ||||| ||||| |||||| Sbjct: 17423020 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 17423079 Query: 165 taatttcaatttcattaagaaaaactaa 192 | ||||||||||||||||||||||||| Sbjct: 17423080 aattttcaatttcattaagaaaaactaa 17423107 Score = 56.0 bits (28), Expect = 7e-05 Identities = 63/76 (82%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntc--ttttttatncataggccgncgnttcggcnttggtnaaaa 299 |||||||||||| ||| || |||||||| |||||| || || |||||| |||| |||| Sbjct: 27318718 caaatccaaaaactttctcctttttttatacataggtcgtcgattcggcattggataaaa 27318659 Query: 300 aagggcngggggcccc 315 |||||| ||| ||||| Sbjct: 27318658 aagggcagggtgcccc 27318643 Score = 46.1 bits (23), Expect = 0.070 Identities = 37/42 (88%) Strand = Plus / Plus Query: 51 atataccgaaacctatgtnagactagataaatattaagagga 92 |||||||| |||| || | | ||||||||||||||||||||| Sbjct: 17422980 atataccgcaacccatataatactagataaatattaagagga 17423021
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 188 bits (95), Expect = 8e-45 Identities = 155/176 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaa 110 ||||||||||||| || | |||||||||||||||||||||||||||||||||||||| || Sbjct: 27410230 atataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaa 27410171 Query: 111 aatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaataattt 170 ||| |||| ||| |||||||| ||||| ||||||| ||||| ||||| |||||| | ||| Sbjct: 27410170 aatctatcgtgggcagcaaagttgtttttttatttgtattttccctttagttaaaatttt 27410111 Query: 171 caatttcattaagaaaaactaactaaataaatggaatatgaaaattaatagaattc 226 ||||||||||||||||||||| || | |||||||| |||||||| ||||||||| Sbjct: 27410110 gaatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattc 27410055 Score = 83.8 bits (42), Expect = 3e-13 Identities = 76/88 (86%) Strand = Plus / Plus Query: 105 gatnaaaatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaa 164 ||| ||||| |||||||| || ||||| | ||| ||||||| ||||| ||||| |||||| Sbjct: 17416561 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 17416620 Query: 165 taatttcaatttcattaagaaaaactaa 192 | ||||||||||||||||||||||||| Sbjct: 17416621 aattttcaatttcattaagaaaaactaa 17416648 Score = 56.0 bits (28), Expect = 7e-05 Identities = 63/76 (82%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntc--ttttttatncataggccgncgnttcggcnttggtnaaaa 299 |||||||||||| ||| || |||||||| |||||| || || |||||| |||| |||| Sbjct: 27410041 caaatccaaaaactttctcctttttttatacataggtcgtcgattcggcattggataaaa 27409982 Query: 300 aagggcngggggcccc 315 |||||| ||| ||||| Sbjct: 27409981 aagggcagggtgcccc 27409966 Score = 46.1 bits (23), Expect = 0.070 Identities = 37/42 (88%) Strand = Plus / Plus Query: 51 atataccgaaacctatgtnagactagataaatattaagagga 92 |||||||| |||| || | | ||||||||||||||||||||| Sbjct: 17416521 atataccgcaacccatataatactagataaatattaagagga 17416562
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 115 bits (58), Expect = 9e-23 Identities = 101/115 (87%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 78 taaatattaagaggactcttccgcctagatnaaaatatatcatggtcagcaaagntgttt 137 ||||||||||||||||||||||| |||||| ||||| ||||||| |||||||| |||| Sbjct: 112191 taaatattaagaggactcttccgtctagataaaaatcaatcatgggcagcaaagttgtt- 112133 Query: 138 ctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaactaa 192 || |||| ||||||||||| |||| | | ||||||||||||||||||||||||| Sbjct: 112132 -ttcatttgtatttgccctttagtttaaattttcaatttcattaagaaaaactaa 112079
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 1e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 129 aagntgtttctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaa 188 ||| ||||| ||||||| ||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 9756530 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 9756471 Query: 189 ctaactaaataaatggaatatgaaaattaatagaattc 226 |||| || | |||||||| |||||||| ||||||||| Sbjct: 9756470 ctaaatagaaaaatggaaaatgaaaatggatagaattc 9756433 Score = 48.1 bits (24), Expect = 0.018 Identities = 62/76 (81%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntc--ttttttatncataggccgncgnttcggcnttggtnaaaa 299 |||||||||||| ||| || |||||||| |||||| | || |||||| |||| |||| Sbjct: 9756419 caaatccaaaaactttctcatttttttatacataggtcatcgattcggcattggataaaa 9756360 Query: 300 aagggcngggggcccc 315 |||||| ||| ||||| Sbjct: 9756359 aagggcagggtgcccc 9756344 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 19303529 aagaaaaactaactaaataa 19303548 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 15369867 aagaaaaactaactaaataa 15369886
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 101 bits (51), Expect = 1e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 129 aagntgtttctttatttatatttgcccttgagttaataatttcaatttcattaagaaaaa 188 ||| ||||| ||||||| ||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 46772 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 46713 Query: 189 ctaactaaataaatggaatatgaaaattaatagaattc 226 |||| || | |||||||| |||||||| ||||||||| Sbjct: 46712 ctaaatagaaaaatggaaaatgaaaatggatagaattc 46675 Score = 48.1 bits (24), Expect = 0.018 Identities = 62/76 (81%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 242 caaatccaaaaaatttntc--ttttttatncataggccgncgnttcggcnttggtnaaaa 299 |||||||||||| ||| || |||||||| |||||| | || |||||| |||| |||| Sbjct: 46661 caaatccaaaaactttctcatttttttatacataggtcatcgattcggcattggataaaa 46602 Query: 300 aagggcngggggcccc 315 |||||| ||| ||||| Sbjct: 46601 aagggcagggtgcccc 46586
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 83.8 bits (42), Expect = 3e-13 Identities = 76/88 (86%) Strand = Plus / Minus Query: 105 gatnaaaatatatcatggtcagcaaagntgtttctttatttatatttgcccttgagttaa 164 ||| ||||| |||||||| || ||||| | ||| ||||||| ||||| ||||| |||||| Sbjct: 140723 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 140664 Query: 165 taatttcaatttcattaagaaaaactaa 192 | ||||||||||||||||||||||||| Sbjct: 140663 aattttcaatttcattaagaaaaactaa 140636 Score = 46.1 bits (23), Expect = 0.070 Identities = 37/42 (88%) Strand = Plus / Minus Query: 51 atataccgaaacctatgtnagactagataaatattaagagga 92 |||||||| |||| || | | ||||||||||||||||||||| Sbjct: 140763 atataccgcaacccatataatactagataaatattaagagga 140722
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 3e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 124 cagcaaagntgtttctttatttatatttgcccttgagttaataatttcaa 173 |||||||| ||||| ||||||| ||||||||||| |||||| | |||||| Sbjct: 4676514 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 4676465
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 3e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 124 cagcaaagntgtttctttatttatatttgcccttgagttaataatttcaa 173 |||||||| ||||| ||||||| ||||||||||| |||||| | |||||| Sbjct: 4676495 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 4676446
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 54.0 bits (27), Expect = 3e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 124 cagcaaagntgtttctttatttatatttgcccttgagttaataatttcaa 173 |||||||| ||||| ||||||| ||||||||||| |||||| | |||||| Sbjct: 75613 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 75662
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 46.1 bits (23), Expect = 0.070 Identities = 44/51 (86%) Strand = Plus / Plus Query: 140 ttatttatatttgcccttgagttaataatttcaatttcattaagaaaaact 190 |||||| |||||| |||| |||||| | | |||||||||||| |||||||| Sbjct: 26193 ttatttgtatttgtcctttagttaaaattgtcaatttcattatgaaaaact 26243
>gb|AY217738.1| Eimeria tenella chloroplast, complete genome Length = 34750 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 ctaactaaataaatggaatatgaaaa 214 |||||||||||||||||||| ||||| Sbjct: 29662 ctaactaaataaatggaataagaaaa 29637 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 ctaactaaataaatggaatatgaaaa 214 |||||||||||||||||||| ||||| Sbjct: 5060 ctaactaaataaatggaataagaaaa 5085
>ref|XM_740900.1| Plasmodium chabaudi chabaudi T-complex protein eta subunit (PC000721.02.0) partial mRNA Length = 1605 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 aaaatatatcatggtcagcaaa 130 |||||||||||||||||||||| Sbjct: 919 aaaatatatcatggtcagcaaa 898
>gb|AC092057.2| Homo sapiens chromosome 3 clone RP11-554O1, complete sequence Length = 166527 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 tttctttatttatatttgcccttgag 160 ||||||||||| |||||||||||||| Sbjct: 127349 tttctttatttttatttgcccttgag 127324
>emb|AL929146.10| Zebrafish DNA sequence from clone CH211-117A23, complete sequence Length = 169102 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 188 actaactaaataaatggaatatgaaaatta 217 ||||| ||||||||||||||| |||||||| Sbjct: 135610 actaaataaataaatggaataagaaaatta 135639
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 caatttcattaagaaaaactaactaa 196 |||||||||||||||| ||||||||| Sbjct: 1424736 caatttcattaagaaagactaactaa 1424711
>gb|AE002115.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 16 of 59 of the complete genome Length = 11126 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 agttaataatttcaatttcat 179 ||||||||||||||||||||| Sbjct: 9269 agttaataatttcaatttcat 9249
>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete sequence Length = 176004 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 agaaaaactaactaaataaat 202 ||||||||||||||||||||| Sbjct: 34749 agaaaaactaactaaataaat 34729
>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9, complete sequence Length = 214459 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ctaaataaatggaatatgaaa 213 ||||||||||||||||||||| Sbjct: 122088 ctaaataaatggaatatgaaa 122108
>emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chromosome 13 Contains a legumain (LGMN) (PRSC1) pseudogene, complete sequence Length = 166490 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tataagtaggagcctatgcct 23 ||||||||||||||||||||| Sbjct: 137561 tataagtaggagcctatgcct 137581
>emb|AL162712.16| Human DNA sequence from clone RP11-158A8 on chromosome 13 Contains a novel gene, complete sequence Length = 115331 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 aatttcaatttcattaagaaa 186 ||||||||||||||||||||| Sbjct: 14612 aatttcaatttcattaagaaa 14632
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatgg 204 ||||||||||||||||||||| Sbjct: 220067 aaaaactaactaaataaatgg 220087
>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence Length = 190733 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataaatgga 205 |||||||||||| |||||||||||| Sbjct: 21362 aagaaaaactaattaaataaatgga 21386
>emb|BX571836.25| Zebrafish DNA sequence from clone CH211-244M9 in linkage group 17, complete sequence Length = 178691 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataaa 201 ||||||||||||||||||||| Sbjct: 84579 aagaaaaactaactaaataaa 84599
>gb|AC008573.5| Homo sapiens chromosome 5 clone CTC-551I11, complete sequence Length = 169544 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 attaagaaaaactaactaaataaat 202 ||||| ||||||||||||||||||| Sbjct: 95912 attaaaaaaaactaactaaataaat 95888
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataaa 201 ||||||||||||||||||||| Sbjct: 4559552 aagaaaaactaactaaataaa 4559572
>gb|AC026446.4| Homo sapiens chromosome 5 clone CTD-2313E2, complete sequence Length = 135499 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 attaagaaaaactaactaaataaat 202 ||||| ||||||||||||||||||| Sbjct: 130016 attaaaaaaaactaactaaataaat 129992
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 taaataaatggaatatgaaaa 214 ||||||||||||||||||||| Sbjct: 21278957 taaataaatggaatatgaaaa 21278937 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 14068183 aagaaaaactaactaaataa 14068202 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 6939060 aagaaaaactaactaaataa 6939079
>gb|AC007560.4| Homo sapiens BAC clone RP11-386G20 from 2, complete sequence Length = 124185 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 ttaagaaaaactaactaaataaatg 203 ||||||||| ||||||||||||||| Sbjct: 122444 ttaagaaaatctaactaaataaatg 122420
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 taaataaatggaatatgaaaa 214 ||||||||||||||||||||| Sbjct: 895 taaataaatggaatatgaaaa 875
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 taaataaatggaatatgaaaa 214 ||||||||||||||||||||| Sbjct: 176466 taaataaatggaatatgaaaa 176446
>gb|AC010636.6|AC010636 Homo sapiens chromosome 19 clone CTD-2332E11, complete sequence Length = 179393 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 agaaaaactaactaaataaat 202 ||||||||||||||||||||| Sbjct: 36124 agaaaaactaactaaataaat 36104
>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19, complete sequence Length = 180994 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataaatgga 205 |||||||||||| |||||||||||| Sbjct: 155157 aagaaaaactaattaaataaatgga 155133
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatgg 204 ||||||||||||||||||||| Sbjct: 266840 aaaaactaactaaataaatgg 266860
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 42.1 bits (21), Expect = 1.1 Identities = 46/55 (83%) Strand = Plus / Minus Query: 57 cgaaacctatgtnagactagataaatattaagaggactcttccgcctagatnaaa 111 ||||||| || | ||||| |||||||||||| | ||| |||| |||||||| ||| Sbjct: 78611 cgaaacccatataagactggataaatattaataagacacttctgcctagataaaa 78557
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 aatttcattaagaaaaactaa 192 ||||||||||||||||||||| Sbjct: 83555 aatttcattaagaaaaactaa 83535
>emb|CR762386.16| Zebrafish DNA sequence from clone CH211-243A15 in linkage group 2, complete sequence Length = 160796 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 189 ctaactaaataaatggaatatgaaaatta 217 |||| ||||||||||||||| |||||||| Sbjct: 68765 ctaaataaataaatggaataagaaaatta 68737
>emb|AL714003.6| Zebrafish DNA sequence from clone BUSM1-167C3 in linkage group 9, complete sequence Length = 136185 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctaaataaatggaatatgaaa 213 ||||||||||||||||||||| Sbjct: 57167 ctaaataaatggaatatgaaa 57147
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gtcagcaaagntgtttctttattt 145 |||||||||| ||||||||||||| Sbjct: 13175 gtcagcaaagttgtttctttattt 13198
>emb|CT030686.6| Mouse DNA sequence from clone RP23-136C5 on chromosome 9, complete sequence Length = 177760 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 aatggaatatgaaaattaatagaat 224 |||| |||||||||||||||||||| Sbjct: 127619 aatgaaatatgaaaattaatagaat 127643
>emb|CT030259.6| Mouse DNA sequence from clone RP24-529L21 on chromosome 9, complete sequence Length = 196590 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 aatggaatatgaaaattaatagaat 224 |||| |||||||||||||||||||| Sbjct: 81053 aatgaaatatgaaaattaatagaat 81077
>gb|AC135634.4| Mus musculus BAC clone RP23-121I20 from 9, complete sequence Length = 209177 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 aatggaatatgaaaattaatagaat 224 |||| |||||||||||||||||||| Sbjct: 150258 aatgaaatatgaaaattaatagaat 150234
>emb|AL831794.6| Mouse DNA sequence from clone RP23-114B13 on chromosome 2, complete sequence Length = 223128 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatggaata 208 |||||||||||||||||||| |||| Sbjct: 127423 aaaaactaactaaataaatgtaata 127447
>ref|XM_639791.1| Dictyostelium discoideum hypothetical protein (DDB0168904), partial mRNA Length = 174 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gagttaataatttcaatttc 177 |||||||||||||||||||| Sbjct: 53 gagttaataatttcaatttc 34
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 133934 aagaaaaactaactaaataa 133953
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 51402 aagaaaaactaactaaataa 51421 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 43262 aagaaaaactaactaaataa 43281
>gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atttcattaagaaaaactaa 192 |||||||||||||||||||| Sbjct: 80097 atttcattaagaaaaactaa 80078
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gaaaaactaactaaataaat 202 |||||||||||||||||||| Sbjct: 112734 gaaaaactaactaaataaat 112715
>gb|AC116111.17| Mus musculus chromosome 10, clone RP23-23B18, complete sequence Length = 211888 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatg 203 |||||||||||||||||||| Sbjct: 89656 aaaaactaactaaataaatg 89675
>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aataatttcaatttcattaa 182 |||||||||||||||||||| Sbjct: 81834 aataatttcaatttcattaa 81853
>gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-327O24, complete sequence Length = 164564 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 tatttgcccttgagttaataattt 170 ||||||||||||||| |||||||| Sbjct: 22932 tatttgcccttgagtaaataattt 22955
>gb|AC107864.10| Mus musculus chromosome 10, clone RP23-388A14, complete sequence Length = 207955 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatg 203 |||||||||||||||||||| Sbjct: 191596 aaaaactaactaaataaatg 191615
>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence Length = 151874 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atttcattaagaaaaactaa 192 |||||||||||||||||||| Sbjct: 32538 atttcattaagaaaaactaa 32519
>gb|AC006009.2| Homo sapiens PAC clone RP5-850I1 from 7, complete sequence Length = 93942 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tttatttatatttgcccttg 158 |||||||||||||||||||| Sbjct: 5053 tttatttatatttgcccttg 5072
>emb|CR361556.8| Zebrafish DNA sequence from clone DKEY-97G1 in linkage group 24, complete sequence Length = 106934 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatg 203 |||||||||||||||||||| Sbjct: 78106 aaaaactaactaaataaatg 78125
>emb|CR954186.2| Medicago truncatula chromosome 5 clone mth2-117e18, COMPLETE SEQUENCE Length = 113233 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ctaactaaataaatggaatatgaa 212 |||||||||||||||| ||||||| Sbjct: 60811 ctaactaaataaatggtatatgaa 60788
>emb|AL442064.10| Human DNA sequence from clone RP11-272D1 on chromosome 9 Contains the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 169905 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 ttaagaaaaactaactaaataaatggaa 206 |||||||||| || |||||||||||||| Sbjct: 40662 ttaagaaaaaatacctaaataaatggaa 40689
>emb|AL157881.14| Human DNA sequence from clone RP11-104M22 on chromosome 9q31.1-32 Contains the 3' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 162726 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 ttaagaaaaactaactaaataaatggaa 206 |||||||||| || |||||||||||||| Sbjct: 124040 ttaagaaaaaatacctaaataaatggaa 124067
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatggaat 207 ||||||||| |||||||||||||| Sbjct: 6320 aaaaactaaataaataaatggaat 6343
>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4 Length = 347050 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 atatgaaaattaatagaatt 225 |||||||||||||||||||| Sbjct: 131690 atatgaaaattaatagaatt 131709
>gb|AF468602.1| Crassostrea gigas clone d62-1 microsatellite sequence Length = 514 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ttgagttaataatttcaatt 175 |||||||||||||||||||| Sbjct: 487 ttgagttaataatttcaatt 468
>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 Length = 25057 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tttcaatttcattaagaaaa 187 |||||||||||||||||||| Sbjct: 20919 tttcaatttcattaagaaaa 20938
>emb|BX548022.6| Zebrafish DNA sequence from clone DKEY-108E7 in linkage group 24, complete sequence Length = 133412 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatg 203 |||||||||||||||||||| Sbjct: 120714 aaaaactaactaaataaatg 120733
>gb|AC015914.8| Homo sapiens chromosome 15, clone RP11-111E14, complete sequence Length = 170078 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataaatgg 204 ||||| |||||||||||||||||| Sbjct: 113852 aagaataactaactaaataaatgg 113829
>gb|DQ205649.1| Phaseolus vulgaris DNA mismatch repair protein (Msh1) gene, complete cds Length = 22288 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 taataatttcaatttcatta 181 |||||||||||||||||||| Sbjct: 2326 taataatttcaatttcatta 2307
>gb|AC104966.4| Homo sapiens chromosome 8, clone CTD-2114J12, complete sequence Length = 103040 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aactaaataaatggaatatg 210 |||||||||||||||||||| Sbjct: 22565 aactaaataaatggaatatg 22584
>gb|AC103727.2| Homo sapiens chromosome 18, clone RP11-189C5, complete sequence Length = 149383 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aaaaactaactaaataaatggaat 207 |||||||||| ||||||||||||| Sbjct: 123416 aaaaactaacaaaataaatggaat 123393
>gb|AC090138.5| Homo sapiens, clone RP11-63C8, complete sequence Length = 189231 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgtttctttatttatatttg 152 |||||||||||||||||||| Sbjct: 49423 tgtttctttatttatatttg 49404
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 attaagaaaaactaactaaataaa 201 |||||||||||||||| ||||||| Sbjct: 420412 attaagaaaaactaacgaaataaa 420435
>gb|AC153946.10| Mus musculus 10 BAC RP24-416M20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151904 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 agactagataaatattaaga 89 |||||||||||||||||||| Sbjct: 1790 agactagataaatattaaga 1771
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 14693022 aagaaaaactaactaaataa 14693003 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 14684882 aagaaaaactaactaaataa 14684863
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 17781744 aagaaaaactaactaaataa 17781725
>gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete sequence Length = 159946 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ttaataatttcaatttcatt 180 |||||||||||||||||||| Sbjct: 5650 ttaataatttcaatttcatt 5669
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gagttaataatttcaatttc 177 |||||||||||||||||||| Sbjct: 56062 gagttaataatttcaatttc 56043
>gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C9 map 3p, complete sequence Length = 151142 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 taagaaaaactaactaaataaatg 203 ||||||||| |||||||||||||| Sbjct: 118186 taagaaaaaataactaaataaatg 118163
>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence Length = 167220 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 taagaaaaactaactaaataaatg 203 ||||||||| |||||||||||||| Sbjct: 81471 taagaaaaaataactaaataaatg 81448
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 106784 aagaaaaactaactaaataa 106803
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 60878 aagaaaaactaactaaataa 60897
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 3250 aagaaaaactaactaaataa 3231
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0438E12 Length = 146851 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 8302 aagaaaaactaactaaataa 8321
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 143928 aagaaaaactaactaaataa 143947
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 141293 aagaaaaactaactaaataa 141312
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 7897 aagaaaaactaactaaataa 7916
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 37382 aagaaaaactaactaaataa 37401
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011E04 Length = 136767 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 56138 aagaaaaactaactaaataa 56119
>gb|AF085429.1|AF085429 Candida parapsilosis ADP/ATP carrier protein gene, nuclear gene encoding mitochondrial protein, complete cds Length = 1996 Score = 40.1 bits (20), Expect = 4.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 244 aatccaaaaaatttntctttttt 266 |||||||||||||| |||||||| Sbjct: 482 aatccaaaaaatttttctttttt 504
>gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209414 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 agactagataaatattaaga 89 |||||||||||||||||||| Sbjct: 189797 agactagataaatattaaga 189778
>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214527 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gaaaaactaactaaataaat 202 |||||||||||||||||||| Sbjct: 181308 gaaaaactaactaaataaat 181289
>dbj|AP002796.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-742N3, complete sequences Length = 93845 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aaataaatggaatatgaaaa 214 |||||||||||||||||||| Sbjct: 53883 aaataaatggaatatgaaaa 53902
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 14773455 aagaaaaactaactaaataa 14773436 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 aagaaaaactaactaaataa 200 |||||||||||||||||||| Sbjct: 14765315 aagaaaaactaactaaataa 14765296
>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 219949 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttcaatttcattaagaaaaa 188 |||||||||||||||||||| Sbjct: 136235 ttcaatttcattaagaaaaa 136254
>gb|AC153964.3| Mus musculus 10 BAC RP24-399H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173453 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaactaactaaataaatg 203 |||||||||||||||||||| Sbjct: 783 aaaaactaactaaataaatg 802
>emb|AL731695.11| Mouse DNA sequence from clone RP23-188M14 on chromosome X, complete sequence Length = 177098 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aataatttcaatttcattaa 182 |||||||||||||||||||| Sbjct: 166928 aataatttcaatttcattaa 166947
>gb|AC110186.10| Mus musculus chromosome 7, clone RP24-503J9, complete sequence Length = 168058 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 agaaaaactaactaaataaa 201 |||||||||||||||||||| Sbjct: 50384 agaaaaactaactaaataaa 50403
>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence Length = 185496 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 taagaaaaactaactaaataaatg 203 ||||||||| |||||||||||||| Sbjct: 47136 taagaaaaaataactaaataaatg 47113 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,742,007 Number of Sequences: 3902068 Number of extensions: 3742007 Number of successful extensions: 91146 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90297 Number of HSP's gapped (non-prelim): 839 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
