ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3e07 |
|---|---|
| Clone Library Name | barley_pub |
>SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 199 bits (507), Expect = 5e-51 Identities = 97/110 (88%), Positives = 103/110 (93%) Frame = -2 Query: 544 LRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 365 ++ P+AFDPFAEANA D+GA G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL Sbjct: 6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 65 Query: 364 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 KKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF Sbjct: 66 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_SPOST (Q9SM41) Protein translation factor SUI1 homolog| Length = 115 Score = 198 bits (504), Expect = 1e-50 Identities = 96/110 (87%), Positives = 103/110 (93%) Frame = -2 Query: 544 LRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 365 ++ P+AFDPF+EANA D+GA G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL Sbjct: 6 IQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 65 Query: 364 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 KKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF Sbjct: 66 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 197 bits (502), Expect = 2e-50 Identities = 96/110 (87%), Positives = 103/110 (93%) Frame = -2 Query: 544 LRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 365 ++ P+AFDPFAEANA D+GA G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSY+KILKDL Sbjct: 6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 65 Query: 364 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 KKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF Sbjct: 66 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_SALBA (O48650) Protein translation factor SUI1 homolog| Length = 113 Score = 194 bits (492), Expect = 2e-49 Identities = 95/107 (88%), Positives = 102/107 (95%) Frame = -2 Query: 535 PSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 356 P+AFDPFAEANAED+GAG KDYVHVR+QQRNGRKSLTTVQGLKK++SYNKILKDLKKE Sbjct: 9 PTAFDPFAEANAEDSGAG--TKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKE 66 Query: 355 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 FCCNGTVVQDPELGQVIQLQGDQRKNV++FLVQAGI KKE IKIHGF Sbjct: 67 FCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>SUI12_ARATH (Q94JV4) Protein translation factor SUI1 homolog 2| Length = 113 Score = 187 bits (474), Expect = 3e-47 Identities = 90/110 (81%), Positives = 103/110 (93%) Frame = -2 Query: 544 LRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDL 365 ++ P+AFDPFA+ANAED+GAG K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+KILKDL Sbjct: 6 VQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDL 63 Query: 364 KKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 KKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF Sbjct: 64 KKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI11_ARATH (P41568) Protein translation factor SUI1 homolog 1| Length = 113 Score = 186 bits (472), Expect = 5e-47 Identities = 90/107 (84%), Positives = 100/107 (93%) Frame = -2 Query: 535 PSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 356 P+AFDPFA+ANAED+GAG K+YVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKE Sbjct: 9 PTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKE 66 Query: 355 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 FCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF Sbjct: 67 FCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI1_BRAOL (Q9SQF4) Protein translation factor SUI1 homolog (Translation| initiation factor nps45) Length = 113 Score = 184 bits (467), Expect = 2e-46 Identities = 89/107 (83%), Positives = 100/107 (93%) Frame = -2 Query: 535 PSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 356 P+AFDPFA+ANAED+GAG K+YVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKE Sbjct: 9 PTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKE 66 Query: 355 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 FCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ I+IHGF Sbjct: 67 FCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
>SUI1_PIMBR (O82569) Protein translation factor SUI1 homolog| Length = 113 Score = 165 bits (418), Expect = 9e-41 Identities = 81/112 (72%), Positives = 93/112 (83%) Frame = -2 Query: 550 STLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILK 371 S ++ P++FDPFAEA DA K+YVH+RIQQRNGRKSLTTVQGLKKE SY+KILK Sbjct: 4 SDIQIPTSFDPFAEAEITDATGS--TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILK 61 Query: 370 DLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 DLKK CCNGTVV D ELG+VIQLQGDQRKNV+TF+VQAGI KK+ IK+H F Sbjct: 62 DLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
>EIF1B_PIG (P61220) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 139 bits (349), Expect = 1e-32 Identities = 62/113 (54%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +ST++ +FDPFA+A D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSTIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GI K+E +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MOUSE (Q9CXU9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 139 bits (349), Expect = 1e-32 Identities = 62/113 (54%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +ST++ +FDPFA+A D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSTIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GI K+E +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MACFA (Q4R4X9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 139 bits (349), Expect = 1e-32 Identities = 62/113 (54%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +ST++ +FDPFA+A D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSTIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GI K+E +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_HUMAN (O60739) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 139 bits (349), Expect = 1e-32 Identities = 62/113 (54%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +ST++ +FDPFA+A D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSTIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GI K+E +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1_PONPY (Q5RFF4) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 136 bits (343), Expect = 5e-32 Identities = 61/113 (53%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +S ++ +FDPFA+A+ D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+AK + +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_HUMAN (P41567) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Sui1iso1) (A121) Length = 113 Score = 136 bits (343), Expect = 5e-32 Identities = 61/113 (53%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +S ++ +FDPFA+A+ D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+AK + +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_BOVIN (Q5E938) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 136 bits (343), Expect = 5e-32 Identities = 61/113 (53%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +S ++ +FDPFA+A+ D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+AK + +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_MOUSE (P48024) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 136 bits (342), Expect = 6e-32 Identities = 60/113 (53%), Positives = 86/113 (76%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +S ++ +FDPFA+A+ D G +DY+H+RIQQRNGRK+LTTVQG+ ++ K++ Sbjct: 1 MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLV 60 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ G+AK + +K+HGF Sbjct: 61 KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
>SUI1_ANOGA (P42678) Protein translation factor SUI1 homolog| Length = 110 Score = 123 bits (308), Expect = 5e-28 Identities = 60/107 (56%), Positives = 80/107 (74%), Gaps = 1/107 (0%) Frame = -2 Query: 532 SAFDPFAEANAEDAGAGPGAKD-YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 356 + FDPFA+A GA +D VH+RIQQRNGRK+LTTVQGL E+ KI++ KKE Sbjct: 7 NTFDPFADAIK---GADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKE 63 Query: 355 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 F CNGTV++ PE G+V+QLQGDQR+N+ +L ++G+AK E +K+HGF Sbjct: 64 FACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110
>SUI1_YEAST (P32911) Protein translation factor SUI1| Length = 108 Score = 120 bits (302), Expect = 3e-27 Identities = 58/106 (54%), Positives = 79/106 (74%), Gaps = 1/106 (0%) Frame = -2 Query: 529 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 350 +FDPFA+ ++ +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK LKK+F Sbjct: 8 SFDPFADTGDDETATS----NYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFA 63 Query: 349 CNGTVVQDPELGQVIQLQGDQRKNVATFLV-QAGIAKKELIKIHGF 215 CNG +V+DPE+G++IQLQGDQR V F++ Q G+ KK IKIHGF Sbjct: 64 CNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKN-IKIHGF 108
>SUI1_DROME (Q9VZS3) Protein translation factor SUI1 homolog| Length = 110 Score = 120 bits (300), Expect = 5e-27 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 3/106 (2%) Frame = -2 Query: 523 DPFAEA---NAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEF 353 DPFA+A N +D G VH+RIQQRNGRK+LTTVQGL E+ KI++ KKEF Sbjct: 10 DPFADAIKGNDDDIQDG-----LVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEF 64 Query: 352 CCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 CNGTV++ PE G+V+QLQGDQR+N+ +L + G+AK + +K+HGF Sbjct: 65 ACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
>SUI1_ASHGO (Q755R1) Protein translation factor SUI1| Length = 108 Score = 116 bits (291), Expect = 5e-26 Identities = 55/105 (52%), Positives = 77/105 (73%) Frame = -2 Query: 529 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 350 +FDPFA+ ++A + +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK L+K+F Sbjct: 8 SFDPFADTGDDEASSS----NYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFG 63 Query: 349 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 CNG +V+D E+G++IQLQGDQR V FL+ K+ IKIHGF Sbjct: 64 CNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
>SUI1_SCHPO (P79060) Protein translation factor sui1| Length = 109 Score = 116 bits (290), Expect = 7e-26 Identities = 60/113 (53%), Positives = 80/113 (70%) Frame = -2 Query: 553 ISTLRFPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 374 +S ++ + DPFA+ +DA + +H+RIQQRNGRK+LTTVQGL +EF +IL Sbjct: 1 MSAIQNFNTVDPFADTGDDDAQP----LNNIHIRIQQRNGRKTLTTVQGLPREFDQKRIL 56 Query: 373 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 215 + LKK+F CNGT+V+D +LG+VIQLQGDQR V FL Q +K+ IKIHGF Sbjct: 57 RALKKDFACNGTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109
>EIF1_CHICK (P51971) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Fragment) Length = 79 Score = 109 bits (273), Expect = 6e-24 Identities = 48/79 (60%), Positives = 64/79 (81%) Frame = -2 Query: 451 IQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVA 272 IQQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+ Sbjct: 1 IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60 Query: 271 TFLVQAGIAKKELIKIHGF 215 FLV+ G+AK + +K+HGF Sbjct: 61 QFLVEIGLAKDDQLKVHGF 79
>SUI1_THEVO (Q97BW9) Protein translation factor SUI1 homolog| Length = 100 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLKKEFS-YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 V + + +R K +T ++G+ + KI K+LKK+ GTV + G++I+LQGD Sbjct: 26 VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81 Query: 286 RKNVATFLVQAG 251 R+ V FL G Sbjct: 82 RQEVKKFLEDMG 93
>SUI1_PYRFU (Q8U006) Protein translation factor SUI1 homolog| Length = 98 Score = 42.0 bits (97), Expect = 0.002 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Frame = -2 Query: 472 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 302 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 18 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72 Query: 301 LQGDQRKNVATFLVQAGIAKKELIKI 224 LQGD R + LV+ G + +ELI++ Sbjct: 73 LQGDHRDRIKKLLVELGFS-EELIEV 97
>SUI1_HALMA (Q5UZP9) Protein translation factor SUI1 homolog| Length = 97 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 +++RI +R K +T ++G K+ + + DLK +F C GTV E GQ I+LQG+ Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81 Query: 286 RKNVATFLVQAG 251 V FL G Sbjct: 82 TGRVEDFLRDKG 93
>SUI1_HALSA (Q9HME3) Protein translation factor SUI1 homolog| Length = 97 Score = 41.2 bits (95), Expect = 0.003 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + +RI +R K +T ++G K+ + + DLK +F C GT V+D E I+LQG+ Sbjct: 27 IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81 Query: 286 RKNVATFLVQAG 251 V FL G Sbjct: 82 SGRVEDFLRNKG 93
>SUI1_PYRHO (P58193) Protein translation factor SUI1 homolog| Length = 99 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + V I++ K T ++G+ +KEF +I K LK + C GT I+LQGD Sbjct: 24 IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78 Query: 286 RKNVATFLVQAGIAKKELIKI 224 R + L + G + +ELI++ Sbjct: 79 RDRIKKLLAELGFS-EELIEV 98
>Y546_SYNY3 (Q55397) Hypothetical protein sll0546| Length = 111 Score = 40.0 bits (92), Expect = 0.006 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Frame = -2 Query: 526 FDPFAEANAEDAGAGPGAKDYVHVRIQQ-RNGRK--SLTTVQGLKKEFSYNKILKDLKKE 356 F P A+ +E+ P + +VRIQ R+GRK ++T V GL+ + L K Sbjct: 15 FGPVADPLSEEQIDLPPQQQ--NVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKS 72 Query: 355 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKK 239 FC +G +++ +++QGDQR+ + +L++ G K Sbjct: 73 FCGSGGTLKE----DCVEIQGDQREKILAYLLKQGYKAK 107
>SUI1_PYRKO (Q5JDH7) Protein translation factor SUI1 homolog| Length = 98 Score = 40.0 bits (92), Expect = 0.006 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + V +++ K T ++G+ +KEF I K LK + C GT I+LQGD Sbjct: 23 IRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IELQGDH 77 Query: 286 RKNVATFLVQAGIAKKELIKI 224 R V L + G + +ELI++ Sbjct: 78 RDRVKKLLAELGFS-EELIEV 97
>SUI1_PYRAB (Q9V1U3) Protein translation factor SUI1 homolog| Length = 99 Score = 39.3 bits (90), Expect = 0.010 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = -2 Query: 472 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 302 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 19 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73 Query: 301 LQGDQRKNVATFLVQAGIAKKELIKI 224 LQGD R + L + G + ++LI++ Sbjct: 74 LQGDHRDRIKKLLAELGFS-EDLIEV 98
>SUI1_PICTO (Q6L1B9) Protein translation factor SUI1 homolog| Length = 99 Score = 38.9 bits (89), Expect = 0.013 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -2 Query: 469 DYVHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQG 293 + V + + +R K +T ++G+ K N+I K LKK+ GTV G++I+LQG Sbjct: 24 EVVKISVDKRRYGKVVTLIEGIDPKVEDINEIAKSLKKKVASGGTVKD----GKIIELQG 79 Query: 292 DQRKNVATFLVQAG 251 D R+ L G Sbjct: 80 DHRETARAQLESMG 93
>SUI1_METMA (Q8PYK3) Protein translation factor SUI1 homolog| Length = 102 Score = 37.0 bits (84), Expect = 0.051 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + V++ +R K +T V+G E +++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 286 RKNVATFLVQAGIAKKEL 233 + L++ G + +++ Sbjct: 83 LTRMKEVLMEKGFSAEQI 100
>SUI1_METAC (Q8TIT3) Protein translation factor SUI1 homolog| Length = 102 Score = 37.0 bits (84), Expect = 0.051 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + V++ +R K +T V+G E +++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 286 RKNVATFLVQAGIAKKEL 233 + L++ G + +++ Sbjct: 83 LARMKEVLMEKGFSAEQI 100
>SUI1_METKA (Q8TX33) Protein translation factor SUI1 homolog| Length = 106 Score = 33.1 bits (74), Expect = 0.73 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLKKE-FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 + + +Q K +T ++GL ++ LK+E C GT + G++I LQGD Sbjct: 30 IKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE----GKII-LQGDH 84 Query: 286 RKNVATFLVQAGIAKKELIKI 224 R V FL++ ++ I++ Sbjct: 85 RNKVREFLIKKEGFSEDAIEV 105
>YCIH_SALTY (P0A2G7) Protein yciH| Length = 108 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = -2 Query: 457 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 290 VRIQ Q +GRK + + G++ + K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 289 QRKNVATFLVQAGIAKK 239 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>YCIH_SALTI (P0A2G8) Protein yciH| Length = 108 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = -2 Query: 457 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 290 VRIQ Q +GRK + + G++ + K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 289 QRKNVATFLVQAGIAKK 239 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>DENR_SCHPO (O42929) Density-regulated protein homolog| Length = 190 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = -2 Query: 463 VHVRIQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 287 V ++ +R RK +TTVQGL K K L +F +V + + I +QGD Sbjct: 99 VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158 Query: 286 RKNVATFLVQ 257 ++ F+++ Sbjct: 159 NYDIFDFILE 168
>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Protein rutabaga) Length = 2248 Score = 30.8 bits (68), Expect = 3.6 Identities = 20/70 (28%), Positives = 27/70 (38%) Frame = -1 Query: 242 EGAHQDPRLLSQGHRHHR*MLEPPASSSPILKT*GILYILPLVWTVSCLMQVVLSPDYYA 63 EG PR+++ GH HHR PA + PL W C +QV + Sbjct: 1603 EGDEDSPRMVNGGHLHHRNGYHLPAGG----------LVNPLQWLYPCDIQVDPTSPVVD 1652 Query: 62 AVPAHQYGLS 33 H + LS Sbjct: 1653 MAHLHDFELS 1662
>OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2| Length = 908 Score = 29.6 bits (65), Expect = 8.1 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -1 Query: 464 CACAHPAAQRQEESDYCSGPKERVQLQQDPQGSQEGI---LLQWHSSPGSRARPG 309 C H AA S + SGP + QLQ +E + + Q S P SR+ PG Sbjct: 29 CLSCHTAAPGMNSSAFGSGPASKPQLQPVQAPERELLSKQVCQPISEPASRSEPG 83
>YCIH_ECOLI (P08245) Protein yciH| Length = 108 Score = 29.6 bits (65), Expect = 8.1 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Frame = -2 Query: 457 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 290 VRIQ Q +GRK + + G+ + K+ +LKK+ C G V VI++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG-----VIEIQGD 87 Query: 289 QRKNVATFLVQAGIAKK 239 +R + + L G+ K Sbjct: 88 KRDLLKSLLEAKGMKVK 104
>SGP50_RAT (Q04807) Sulfated 50 kDa glycoprotein precursor (SGP50)| (Endothelial ligand FOR L-selectin) (Glycosylation-dependent cell adhesion molecule 1) (GlyCAM-1) Length = 146 Score = 29.6 bits (65), Expect = 8.1 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -2 Query: 517 FAEANAEDAGAGPGAKDYVHVRIQQRNG--RKSLTTVQGLKKEFSYNKILKDLKKEFCCN 344 FA A A PG+KD +H+R Q + T + KE + +K L K+ F N Sbjct: 9 FASLAATSLAAVPGSKDELHLRTQPTDAIPASQFTPSSHISKESTSSKDLS--KESFIFN 66 Query: 343 GTVVQDPELG 314 +V + +G Sbjct: 67 EELVSEDNVG 76
>PROP_MOUSE (P11680) Properdin precursor (Factor P)| Length = 464 Score = 29.6 bits (65), Expect = 8.1 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 515 C*GKC*GCWCRPRRKRLCACAHPAAQRQEESDYCSGP 405 C G C G P+ R +C+ PA Q CSGP Sbjct: 201 CSGSCLGGAQEPKETRSRSCSAPAPSHQPPGKPCSGP 237
>ARGR2_YEAST (P05085) Arginine metabolism regulation protein II| Length = 880 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = -1 Query: 497 GCWCRPRRKRLCACAHPAAQRQEESDY-CSGPKERVQ----LQQDPQG 369 GCW RK C HP QR E+S+ C G +++ +Q DP G Sbjct: 20 GCWTCRGRKVKCDLRHPHCQRCEKSNLPCGGYDIKLRWSKPMQFDPYG 67 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,985,830 Number of Sequences: 219361 Number of extensions: 1620601 Number of successful extensions: 4347 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4221 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4341 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
