ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3d23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 375 e-101
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 375 e-101
3gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene 192 7e-46
4emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 186 4e-44
5gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 186 4e-44
6gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 186 4e-44
7dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 186 4e-44
8gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II lo... 82 2e-12
9gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, comple... 52 0.002
10emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, ... 48 0.024
11gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, com... 46 0.096
12emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secr... 46 0.096
13gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cance... 44 0.38
14gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Can... 44 0.38
15gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 44 0.38
16gb|AC108033.3| Homo sapiens BAC clone RP11-109M22 from 4, comple... 44 0.38
17gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, comp... 44 0.38
18ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase... 42 1.5
19gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, com... 42 1.5
20gb|AC117233.3| Mus musculus BAC clone RP23-408M8 from 6, complet... 42 1.5
21emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 o... 42 1.5
22emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 i... 42 1.5
23emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in... 42 1.5
24gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Canc... 42 1.5
25gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, com... 42 1.5
26gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X... 42 1.5
27gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, comple... 42 1.5
28gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3... 42 1.5
29gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, co... 42 1.5
30gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, com... 42 1.5
31gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complet... 42 1.5
32emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chr... 42 1.5
33dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.5
34gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome... 40 5.9
35gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, com... 40 5.9
36gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.9
37gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, comp... 40 5.9
38gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240... 40 5.9
39ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamm... 40 5.9
40gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, comp... 40 5.9
41ref|XM_568398.1| Cryptococcus neoformans var. neoformans JEC21 d... 40 5.9
42gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complet... 40 5.9
43gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complet... 40 5.9
44gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.9
45gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, com... 40 5.9
46gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete se... 40 5.9
47emb|AL357373.8| Human DNA sequence from clone RP11-414C16 on chr... 40 5.9
48emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chr... 40 5.9
49emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chro... 40 5.9
50gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence 40 5.9
51gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatibli... 40 5.9
52emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, ... 40 5.9
53gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, comp... 40 5.9
54gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 40 5.9
55gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, comple... 40 5.9
56dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, ... 40 5.9
57gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complet... 40 5.9
58gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 5.9
59dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 40 5.9
60dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.9
61gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, comple... 40 5.9
62emb|BX323811.14| Zebrafish DNA sequence from clone DKEY-234H16 i... 40 5.9
63dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.9
64dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
65gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromos... 40 5.9
66gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosom... 40 5.9
67gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 5.9
68gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 5.9
69gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 5.9
70emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in... 40 5.9
71dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 5.9
72emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chr... 40 5.9
73gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.9
74emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H1... 40 5.9
75emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 i... 40 5.9
76gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility grou... 40 5.9
77gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 40 5.9
78gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.9
79gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, ... 40 5.9
80emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 5.9
81gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
82emb|AL157375.6| Human DNA sequence from clone RP1-133P16 on chro... 40 5.9
83emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chro... 40 5.9
84gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete seq... 40 5.9
85gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, comple... 40 5.9 
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
            polymerase subunit (rpo) genes
          Length = 21245

 Score =  375 bits (189), Expect = e-101
 Identities = 198/201 (98%)
 Strand = Plus / Minus

                                                                        
Query: 16   ctttcttaatcttatacaatttctcttcctttttcttatagttatacatacaattatgta 75
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5231 ctttcttaatcttatacaatttcccttcctttttcttatagttatacatacaattatgta 5172

                                                                        
Query: 76   tgtattatatgagcaactttctatgggtcacatagacatccaaataagcagtagaagtga 135
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5171 tgtattatatgaccaactttctatgggtcacatagacatccaaataagcagtagaagtga 5112

                                                                        
Query: 136  gatggggaaaagaggtctgaaataaaaagggaatacaatttatgtatggattccggtaaa 195
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5111 gatggggaaaagaggtctgaaataaaaagggaatacgatttatgtatggattccggtaaa 5052

                                 
Query: 196  ataccggtactctattccata 216
            |||||||||||||||||||||
Sbjct: 5051 ataccggtactctattccata 5031



 Score =  212 bits (107), Expect = 7e-52
 Identities = 156/173 (90%), Gaps = 5/173 (2%)
 Strand = Plus / Minus

                                                                        
Query: 255  ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 310
            ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 5031 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 4972

                                                                        
Query: 311  gtctttctttatctttatcgatcgggagtagtgnnnnnnnnttcctatactccttccctc 370
            |||||||||||||||||||||||||||||||||        ||||||||| |||||||| 
Sbjct: 4971 gtctttctttatctttatcgatcgggagtagtg-aaaaaaattcctatacgccttccctg 4913

                                                                 
Query: 371  cctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatggg 423
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4912 cctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtggg 4860



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                             
Query: 1    atctctaaccc-cgagctttcttaatcttatac 32
            ||||||||||| |||||||||||||||||||||
Sbjct: 5263 atctctaacccacgagctttcttaatcttatac 5231
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>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  375 bits (189), Expect = e-101
 Identities = 198/201 (98%)
 Strand = Plus / Minus

                                                                         
Query: 16    ctttcttaatcttatacaatttctcttcctttttcttatagttatacatacaattatgta 75
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 16585 ctttcttaatcttatacaatttcccttcctttttcttatagttatacatacaattatgta 16526

                                                                         
Query: 76    tgtattatatgagcaactttctatgggtcacatagacatccaaataagcagtagaagtga 135
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16525 tgtattatatgaccaactttctatgggtcacatagacatccaaataagcagtagaagtga 16466

                                                                         
Query: 136   gatggggaaaagaggtctgaaataaaaagggaatacaatttatgtatggattccggtaaa 195
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16465 gatggggaaaagaggtctgaaataaaaagggaatacgatttatgtatggattccggtaaa 16406

                                  
Query: 196   ataccggtactctattccata 216
             |||||||||||||||||||||
Sbjct: 16405 ataccggtactctattccata 16385



 Score =  212 bits (107), Expect = 7e-52
 Identities = 156/173 (90%), Gaps = 5/173 (2%)
 Strand = Plus / Minus

                                                                         
Query: 255   ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 310
             ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 16385 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 16326

                                                                         
Query: 311   gtctttctttatctttatcgatcgggagtagtgnnnnnnnnttcctatactccttccctc 370
             |||||||||||||||||||||||||||||||||        ||||||||| |||||||| 
Sbjct: 16325 gtctttctttatctttatcgatcgggagtagtg-aaaaaaattcctatacgccttccctg 16267

                                                                  
Query: 371   cctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatggg 423
             |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16266 cctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtggg 16214



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 1     atctctaaccc-cgagctttcttaatcttatac 32
             ||||||||||| |||||||||||||||||||||
Sbjct: 16617 atctctaacccacgagctttcttaatcttatac 16585
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>gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene
          Length = 559

 Score =  192 bits (97), Expect = 7e-46
 Identities = 150/167 (89%), Gaps = 7/167 (4%)
 Strand = Plus / Minus

                                                                       
Query: 255 ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 310
           ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 550 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 491

                                                                       
Query: 311 gtctttctttatctttatcgatcgggagtagtgnnnnnnnnttcctatactccttccctc 370
           |||||||||||||||||||||||||||||||||        ||||||||| |||||||| 
Sbjct: 490 gtctttctttatctttatcgatcgggagtagtg--aaaaaattcctatacgccttccctg 433

                                                          
Query: 371 cctctttaatgagagatgcaaaataaaaaagtgaagt-aagggtgcc 416
           ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 432 cctctttaatgagagatgcaaaataaaaaagtgaagtcaagggtgcc 386
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>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 24    atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 83
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17872 atcttatccaatttcacttcctttttcttatagttatacatacaattatgtatgtattat 17813

                                                               
Query: 84    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 133
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17812 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 17763



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 174   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 233
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17463 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17404

                                       
Query: 234   taagatgaggatggtatcatcataaa 259
             |||||||||| |||||||||||||||
Sbjct: 17403 taagatgagggtggtatcatcataaa 17378



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 375   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccc 417
             |||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 17273 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccc 17230
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>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 24    atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 83
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79997 atcttatccaatttcccttcctttttcttatagttatacatacaattatgtatgtattat 79938

                                                               
Query: 84    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 133
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 79937 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 79888



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 174   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 233
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 79579 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 79520

                                                                         
Query: 234   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 293
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 79519 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 79465

                                           
Query: 294   ccacatatcgtatgtgtgtctttctttatc 323
             |||| |||  ||||| || ||||| |||||
Sbjct: 79464 ccacgtatgatatgtatgcctttccttatc 79435



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 375   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccc 417
             |||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 79390 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccc 79347
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>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 24    atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 83
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17864 atcttatccaatttcacttcctttttcttatagttatacatacaattatgtatgtattat 17805

                                                               
Query: 84    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 133
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17804 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 17755



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 174   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 233
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17455 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17396

                                       
Query: 234   taagatgaggatggtatcatcataaa 259
             |||||||||| |||||||||||||||
Sbjct: 17395 taagatgagggtggtatcatcataaa 17370



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 375   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccc 417
             |||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 17265 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccc 17222
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>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 24    atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 83
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370 atcttatccaatttcccttcctttttcttatagttatacatacaattatgtatgtattat 18311

                                                               
Query: 84    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 133
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 18310 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 18261



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 174   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 233
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17952 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17893

                                                                         
Query: 234   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 293
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 17892 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 17838

                                           
Query: 294   ccacatatcgtatgtgtgtctttctttatc 323
             |||| |||  ||||| || ||||| |||||
Sbjct: 17837 ccacgtatgatatgtatgcctttccttatc 17808



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 375   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccc 417
             |||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 17763 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccc 17720
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>gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II low MW protein
           (psbM) gene, complete cds; chloroplast
          Length = 653

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 24  atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtat 80
           ||||||| |||||||  ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 atcttatccaatttcctttcctttttcttataattatacatacaattatgtatgtat 482
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>gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, complete sequence
          Length = 157779

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 59     atacatacaattatgtatgtattata 84
              ||||||||||||||||||||||||||
Sbjct: 128090 atacatacaattatgtatgtattata 128115
to top
>emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, complete sequence
          Length = 174414

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 291    aatccacatatcgtatgtgtgtctttct 318
              ||||||||| ||||||||||||||||||
Sbjct: 174331 aatccacatgtcgtatgtgtgtctttct 174304
to top
>gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, complete sequence
          Length = 41781

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 59   atacatacaattatgtatgtattatat 85
            |||||| ||||||||||||||||||||
Sbjct: 5561 atacatccaattatgtatgtattatat 5587
to top
>emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secreted gel-forming mucin,
           exons 39-47
          Length = 4200

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 59  atacatacaattatgtatgtattatat 85
           |||||| ||||||||||||||||||||
Sbjct: 87  atacatccaattatgtatgtattatat 113
to top
>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197962

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 59    atacatacaattatgtatgtat 80
             ||||||||||||||||||||||
Sbjct: 30595 atacatacaattatgtatgtat 30616
to top
>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 59     atacatacaattatgtatgtat 80
              ||||||||||||||||||||||
Sbjct: 119005 atacatacaattatgtatgtat 118984
to top
>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 28    tatacaatttctcttcctttttctta 53
             |||||||||| |||||||||||||||
Sbjct: 38236 tatacaatttttcttcctttttctta 38261
to top
>gb|AC108033.3| Homo sapiens BAC clone RP11-109M22 from 4, complete sequence
          Length = 84994

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 52    tatagttatacatacaattatgtatgtattatat 85
             |||||||||||||| |||| ||| ||||||||||
Sbjct: 43030 tatagttatacatataattgtgtttgtattatat 42997
to top
>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 28    tatacaatttctcttcctttttctta 53
             |||||||||| |||||||||||||||
Sbjct: 52088 tatacaatttttcttcctttttctta 52063
to top
>ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase (DDB0185180), partial
            mRNA
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 312  tctttctttatctttatcgat 332
            |||||||||||||||||||||
Sbjct: 2700 tctttctttatctttatcgat 2680
to top
>gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, complete sequence
          Length = 87532

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 58    tatacatacaattatgtatgtatta 82
             |||||||||| ||||||||||||||
Sbjct: 49163 tatacatacatttatgtatgtatta 49187
to top
>gb|AC117233.3| Mus musculus BAC clone RP23-408M8 from 6, complete sequence
          Length = 187083

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 57     ttatacatacaattatgtatgtatt 81
              ||||||||| |||||||||||||||
Sbjct: 144403 ttatacatagaattatgtatgtatt 144379
to top
>emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 on chromosome 6q16.3-21
             Contains a novel gene and a chromatin assembly factor 1
             p60 subunit (CHAF1B) pseudogene, complete sequence
          Length = 136299

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   gatgcaaaataaaaaagtgaa 405
             |||||||||||||||||||||
Sbjct: 26919 gatgcaaaataaaaaagtgaa 26939
to top
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17,
             complete sequence
          Length = 161999

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    atttctcttcctttttcttat 54
             |||||||||||||||||||||
Sbjct: 23386 atttctcttcctttttcttat 23366
to top
>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 156    aataaaaagggaatacaattt 176
              |||||||||||||||||||||
Sbjct: 104271 aataaaaagggaatacaattt 104251
to top
>gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170215

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 372   ctctttaatgagagatgcaaaataaaaaa 400
             ||||| |||||||||| ||||||||||||
Sbjct: 47293 ctcttgaatgagagattcaaaataaaaaa 47265
to top
>gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, complete sequence
          Length = 137075

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    gttatacatacaattatgtatgtat 80
             |||||||||| ||||||||||||||
Sbjct: 62649 gttatacatataattatgtatgtat 62625
to top
>gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X, complete sequence
          Length = 213793

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 381    gagagatgcaaaataaaaaagtgaa 405
              |||||| ||||||||||||||||||
Sbjct: 170898 gagagaagcaaaataaaaaagtgaa 170922
to top
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence
          Length = 209613

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 308   tgtgtctttctttatctttatcgat 332
             ||||||||||| |||||||||||||
Sbjct: 41546 tgtgtctttctatatctttatcgat 41570
to top
>gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3 gene, complete cds
          Length = 4325

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 312  tctttctttatctttatcgat 332
            |||||||||||||||||||||
Sbjct: 2885 tctttctttatctttatcgat 2865
to top
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence
          Length = 158329

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 58    tatacatacaattatgtatgtatta 82
             |||||||||| ||||||||||||||
Sbjct: 66666 tatacatacatttatgtatgtatta 66690
to top
>gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, complete sequence
          Length = 173767

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   acatccaaataagcagtagaa 131
             |||||||||||||||||||||
Sbjct: 14839 acatccaaataagcagtagaa 14819
to top
>gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complete sequence
          Length = 189070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 57    ttatacatacaattatgtatgtatt 81
             ||||||||| |||||||||||||||
Sbjct: 87335 ttatacatagaattatgtatgtatt 87311
to top
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete
             sequence
          Length = 203623

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    tcttcctttttcttatagtta 59
             |||||||||||||||||||||
Sbjct: 27584 tcttcctttttcttatagtta 27564
to top
>dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a,
             complete sequence
          Length = 33254

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    cttcctttttcttatagttat 60
             |||||||||||||||||||||
Sbjct: 15145 cttcctttttcttatagttat 15125
to top
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence
          Length = 216566

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    tgtgtgtctttctttatctt 325
              ||||||||||||||||||||
Sbjct: 167733 tgtgtgtctttctttatctt 167714
to top
>gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, complete sequence
          Length = 140252

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    tatacatacaattatgtatg 77
             ||||||||||||||||||||
Sbjct: 61591 tatacatacaattatgtatg 61610
to top
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     acaatttctcttcctttttc 50
              ||||||||||||||||||||
Sbjct: 274218 acaatttctcttcctttttc 274199
to top
>gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, complete sequence
          Length = 184088

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tacatacaattatgtatgta 79
             ||||||||||||||||||||
Sbjct: 26089 tacatacaattatgtatgta 26070
to top
>gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240357J7, complete
             sequence
          Length = 38387

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   atacaatttatgtatggatt 187
             ||||||||||||||||||||
Sbjct: 25268 atacaatttatgtatggatt 25287
to top
>ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2),
            mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
to top
>gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, complete sequence
          Length = 253338

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     caattatgtatgtattatat 85
              ||||||||||||||||||||
Sbjct: 185523 caattatgtatgtattatat 185504
to top
>ref|XM_568398.1| Cryptococcus neoformans var. neoformans JEC21 delayed-type
            hypersensitivity antigen - related (CNM00910) partial
            mRNA
          Length = 1349

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   acaatttctcttcctttttc 50
            ||||||||||||||||||||
Sbjct: 1156 acaatttctcttcctttttc 1137
to top
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence
          Length = 193725

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tacatacaattatgtatgta 79
             ||||||||||||||||||||
Sbjct: 55175 tacatacaattatgtatgta 55156
to top
>gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complete sequence
          Length = 194290

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     tcttatacaatttctcttcctttt 48
              |||||||||||||||||| |||||
Sbjct: 146347 tcttatacaatttctctttctttt 146370
to top
>gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:6817446), partial cds
          Length = 2720

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1865 ctccttccctccctctttaa 1846
to top
>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence
          Length = 142598

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acatacaattatgtatgtat 80
              ||||||||||||||||||||
Sbjct: 137116 acatacaattatgtatgtat 137135
to top
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ttctcttcctttttcttata 55
              ||||||||||||||||||||
Sbjct: 100022 ttctcttcctttttcttata 100041
to top
>emb|AL357373.8| Human DNA sequence from clone RP11-414C16 on chromosome 1 Contains part
             of the DAB1 gene for disabled homolog 1 (Drosophila) and a
             novel pseudogene, complete sequence
          Length = 87340

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    ttatacatacaattatgtatgtat 80
             ||||||||| ||||||||||||||
Sbjct: 44152 ttatacatataattatgtatgtat 44175
to top
>emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 107328

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 51    ttatagttatacatacaattatgtatgt 78
             ||||| ||||||||| ||||||||||||
Sbjct: 97496 ttataattatacataaaattatgtatgt 97523
to top
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the
             5' end of a novel gene, the gene for glutathione
             transferase omega 1 (GSTO1), the 5' end of a variant of
             the gene for a novel glutathione-S-transferase and two CpG
             islands, complete sequence
          Length = 104378

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   tccaaataagcagtagaagt 133
             ||||||||||||||||||||
Sbjct: 34653 tccaaataagcagtagaagt 34634
to top
>gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence
          Length = 220468

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    caattatgtatgtattatat 85
             ||||||||||||||||||||
Sbjct: 42700 caattatgtatgtattatat 42681
to top
>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 147595

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcttcctttttcttatagtt 58
             ||||||||||||||||||||
Sbjct: 37210 tcttcctttttcttatagtt 37191
to top
>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17
          Length = 198176

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    aaataaaaagggaatacaat 174
              ||||||||||||||||||||
Sbjct: 139541 aaataaaaagggaatacaat 139560
to top
>gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, complete sequence
          Length = 187064

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acatacaattatgtatgtat 80
             ||||||||||||||||||||
Sbjct: 10305 acatacaattatgtatgtat 10286
to top
>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127439

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   tactccttccctccctcttt 377
             ||||||||||||||||||||
Sbjct: 55969 tactccttccctccctcttt 55988
to top
>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence
          Length = 219357

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gaagtgagatggggaaaaga 148
             ||||||||||||||||||||
Sbjct: 14735 gaagtgagatggggaaaaga 14754
to top
>dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBb
          Length = 80562

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    atacatacaattatgtatgt 78
             ||||||||||||||||||||
Sbjct: 79040 atacatacaattatgtatgt 79059
to top
>gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complete sequence
          Length = 193650

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tgcaaaataaaaaagtgaag 406
             ||||||||||||||||||||
Sbjct: 21099 tgcaaaataaaaaagtgaag 21080
to top
>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    tacaattatgtatgtattat 83
             ||||||||||||||||||||
Sbjct: 66669 tacaattatgtatgtattat 66650
to top
>dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920194L06 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1859 ctccttccctccctctttaa 1840
to top
>dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830040H14 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2505

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1851 ctccttccctccctctttaa 1832
to top
>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence
          Length = 114005

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tacaattatgtatgtattat 83
             ||||||||||||||||||||
Sbjct: 56536 tacaattatgtatgtattat 56555
to top
>emb|BX323811.14| Zebrafish DNA sequence from clone DKEY-234H16 in linkage group 5,
              complete sequence
          Length = 204094

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 58     tatacatacaattatgtatgtattatat 85
              |||||| |||| ||||||||||||||||
Sbjct: 156448 tatacacacaaatatgtatgtattatat 156421
to top
>dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330046K02 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1974 ctccttccctccctctttaa 1955
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 114      tccaaataagcagtagaagt 133
                ||||||||||||||||||||
Sbjct: 17016496 tccaaataagcagtagaagt 17016515
to top
>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence
          Length = 188174

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acatacaattatgtatgtat 80
              ||||||||||||||||||||
Sbjct: 145284 acatacaattatgtatgtat 145265
to top
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence
          Length = 217099

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    ctccttccctccctctttaa 379
              ||||||||||||||||||||
Sbjct: 149173 ctccttccctccctctttaa 149192
to top
>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 58    tatacatacaattatgtatgtattatat 85
             ||||||||||| ||||||| ||||||||
Sbjct: 46303 tatacatacaactatgtatatattatat 46330
to top
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tccaaataagcagtagaagt 133
             ||||||||||||||||||||
Sbjct: 56988 tccaaataagcagtagaagt 57007
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>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete
              sequence
          Length = 247089

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    gaatacaatttatgtatgga 185
              ||||||||||||||||||||
Sbjct: 206498 gaatacaatttatgtatgga 206479
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>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17,
              complete sequence
          Length = 161483

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 250    tcatcataaagaaagatagagtaa 273
              ||||||||||||||| ||||||||
Sbjct: 129596 tcatcataaagaaagttagagtaa 129573
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     atacaatttctcttcctttt 48
              ||||||||||||||||||||
Sbjct: 276286 atacaatttctcttcctttt 276267
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>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete
            sequence
          Length = 205765

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   atgtatgtattatatgagcaactt 94
            ||||||||| ||||||||||||||
Sbjct: 9266 atgtatgtagtatatgagcaactt 9243
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>gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:4953412), containing frame-shift errors
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1767 ctccttccctccctctttaa 1748
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>emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H19, complete sequence
          Length = 188247

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    aattctactaatccacatat 301
              ||||||||||||||||||||
Sbjct: 115323 aattctactaatccacatat 115304
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>emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 in linkage group 19,
             complete sequence
          Length = 191582

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   gtatgtgtgtctttctttat 322
             ||||||||||||||||||||
Sbjct: 32502 gtatgtgtgtctttctttat 32483
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>gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility group protein (HMG1) gene,
            complete cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  aataggaaattaagatgagg 243
            ||||||||||||||||||||
Sbjct: 1173 aataggaaattaagatgagg 1154
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>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6
          Length = 112629

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   aaataaaaagggaatacaat 174
             ||||||||||||||||||||
Sbjct: 76449 aaataaaaagggaatacaat 76468
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>gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone MGC:118107 IMAGE:4936738), complete cds
          Length = 2670

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1846 ctccttccctccctctttaa 1827
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>gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, complete cds
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ctccttccctccctctttaa 379
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tgtgtgtctttctttatctt 325
              ||||||||||||||||||||
Sbjct: 211524 tgtgtgtctttctttatctt 211543
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 114      tccaaataagcagtagaagt 133
                ||||||||||||||||||||
Sbjct: 17025536 tccaaataagcagtagaagt 17025555
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>emb|AL157375.6| Human DNA sequence from clone RP1-133P16 on chromosome 6 Contains the
            ARF1 (ADP-ribosylation factor 1) gene, ESTs, STSs and
            GSSs, complete sequence
          Length = 65763

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   acatacaattatgtatgtat 80
            ||||||||||||||||||||
Sbjct: 5944 acatacaattatgtatgtat 5963
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>emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chromosome 9, complete
              sequence
          Length = 243795

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    gaatacaatttatgtatgga 185
              ||||||||||||||||||||
Sbjct: 145000 gaatacaatttatgtatgga 144981
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>gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete sequence
          Length = 30767

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  aaaaagggaatacaatttat 178
            ||||||||||||||||||||
Sbjct: 6106 aaaaagggaatacaatttat 6087
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>gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acatacaattatgtatgtat 80
              ||||||||||||||||||||
Sbjct: 158640 acatacaattatgtatgtat 158621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,731,866
Number of Sequences: 3902068
Number of extensions: 6731866
Number of successful extensions: 178805
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178431
Number of HSP's gapped (non-prelim): 369
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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