>gb|DQ128063.1| Triticum monococcum clone tm3-1, genomic sequence
          Length = 499

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 308 cctctaggcgccagactctctaccgtactcttcatccatgaggtctccttc 358
           |||||||||| | ||||| ||| || |||||||||||||||| || |||||
Sbjct: 345 cctctaggcgtcggactcgctatcgaactcttcatccatgagatcaccttc 295

>gb|DQ128062.1| Triticum monococcum clone p8-3, genomic sequence
          Length = 474

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 308 cctctaggcgccagactctctaccgtactcttcatccatgaggtctccttc 358
           |||||||||| | ||||| ||| || |||||||||||||||| || |||||
Sbjct: 345 cctctaggcgtcggactcgctatcgaactcttcatccatgagatcaccttc 295

>gb|DQ128035.1| Triticum aestivum clone A3-4 Ty3/gypsy-like retrotransposon,
           partial sequence
          Length = 486

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 308 cctctaggcgccagactctctaccgtactcttcatccatgaggtctccttc 358
           |||||||||| ||||||| ||| | || |||||||||||||| || |||||
Sbjct: 333 cctctaggcgtcagactcgctatcatattcttcatccatgagatcgccttc 283

>gb|AC080092.9| Homo sapiens BAC clone RP11-832D10 from 7, complete sequence
          Length = 32964

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     taatattaaacagggtagagc 26
             |||||||||||||||||||||
Sbjct: 32098 taatattaaacagggtagagc 32078

>gb|AC005153.2| Homo sapiens PAC clone RP4-537P9 from 7, complete sequence
          Length = 124191

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    taatattaaacagggtagagc 26
            |||||||||||||||||||||
Sbjct: 1134 taatattaaacagggtagagc 1114

>gb|AC142290.1| Pan troglodytes BAC clone RP43-180M6 from 7, complete sequence
          Length = 234045

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 6    taatattaaacagggtagagc 26
            |||||||||||||||||||||
Sbjct: 4786 taatattaaacagggtagagc 4806

>gb|AC106712.5| Homo sapiens 3 BAC RP11-221J22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     cttaatattaaacagggtaga 24
             |||||||||||||||||||||
Sbjct: 34872 cttaatattaaacagggtaga 34892

>dbj|AK021643.1| Homo sapiens cDNA FLJ11581 fis, clone HEMBA1003598
          Length = 3469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 6    taatattaaacagggtagagc 26
            |||||||||||||||||||||
Sbjct: 1918 taatattaaacagggtagagc 1938

>gb|AC112135.3| Homo sapiens 3 BAC RP11-484G22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175382

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      cttaatattaaacagggtaga 24
              |||||||||||||||||||||
Sbjct: 110178 cttaatattaaacagggtaga 110198

>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete sequence
          Length = 230197

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      taatattaaacagggtagagc 26
              |||||||||||||||||||||
Sbjct: 203271 taatattaaacagggtagagc 203291

>gb|AY642113.1| Dicentrarchus labrax follicle stimulating hormone receptor precursor
            (fshr) mRNA, complete cds
          Length = 3134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  tgcagatgatggaggtggagt 479
            |||||||||||||||||||||
Sbjct: 1278 tgcagatgatggaggtggagt 1258

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 386     cgcgatgtcgccgacggcgtc 406
               |||||||||||||||||||||
Sbjct: 1322406 cgcgatgtcgccgacggcgtc 1322426

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 387     gcgatgtcgccgacggcgtcctgta 411
               |||||||||||| ||||||||||||
Sbjct: 3128846 gcgatgtcgccggcggcgtcctgta 3128870

>ref|XM_758721.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0179) partial mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 actctctaccgtactcttca 341
           ||||||||||||||||||||
Sbjct: 540 actctctaccgtactcttca 521

>emb|AL596217.6| Human DNA sequence from clone RP11-13J14 on chromosome 1 Contains a CpG
              island, complete sequence
          Length = 183774

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    gatgatggaggtggagtcac 482
              ||||||||||||||||||||
Sbjct: 111025 gatgatggaggtggagtcac 111044

>emb|AL022323.7|HS243E7 Human DNA sequence from clone CTA-243E7 on chromosome 22q12.1,
            complete sequence
          Length = 183113

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   gacagatatattacagtggt 92
            ||||||||||||||||||||
Sbjct: 1340 gacagatatattacagtggt 1359

>emb|AL008583.1|HS327J16 Human DNA sequence from clone RP3-327J16 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 111746

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 543   gcagtgggatctcgatggag 562
             ||||||||||||||||||||
Sbjct: 49548 gcagtgggatctcgatggag 49529

>ref|XM_780757.1| PREDICTED: Strongylocentrotus purpuratus similar to Fc fragment of
            IgG binding protein (LOC580716), mRNA
          Length = 5268

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   acactatcataaggacagat 79
            ||||||||||||||||||||
Sbjct: 1049 acactatcataaggacagat 1068

>gb|AY038865.1|AY038861S05 Mus musculus protein tyrosine phosphatase receptor-like protein J
             (Ptprj) gene, intron 1
          Length = 13896

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   agtgacgtgacatgccataa 158
             ||||||||||||||||||||
Sbjct: 12146 agtgacgtgacatgccataa 12127

>ref|NM_058178.1| Homo sapiens neuronal pentraxin receptor (NPTXR), transcript variant
            2, mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  gcagtgggatctcgatggag 562
            ||||||||||||||||||||
Sbjct: 2168 gcagtgggatctcgatggag 2187

>ref|NM_014293.2| Homo sapiens neuronal pentraxin receptor (NPTXR), transcript variant
            1, mRNA
          Length = 5814

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  gcagtgggatctcgatggag 562
            ||||||||||||||||||||
Sbjct: 2171 gcagtgggatctcgatggag 2190

>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete
              sequence
          Length = 178273

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    agtgacgtgacatgccataa 158
              ||||||||||||||||||||
Sbjct: 157578 agtgacgtgacatgccataa 157597

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    cgatgtcgccgacggcgtcc 407
              ||||||||||||||||||||
Sbjct: 231486 cgatgtcgccgacggcgtcc 231467

>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 580     attcgcccgcgggttagaaggggc 603
               ||||||||||| ||||||||||||
Sbjct: 1527079 attcgcccgcgtgttagaaggggc 1527102

>emb|AL162057.1|HSM802588 Homo sapiens mRNA; cDNA DKFZp761N0524 (from clone DKFZp761N0524)
          Length = 4459

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 543 gcagtgggatctcgatggag 562
           ||||||||||||||||||||
Sbjct: 812 gcagtgggatctcgatggag 831

>emb|AL161974.1|HSM802567 Homo sapiens mRNA; cDNA DKFZp761M2013 (from clone DKFZp761M2013)
          Length = 5140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  gcagtgggatctcgatggag 562
            ||||||||||||||||||||
Sbjct: 1484 gcagtgggatctcgatggag 1503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,573,637
Number of Sequences: 3902068
Number of extensions: 4573637
Number of successful extensions: 82038
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81911
Number of HSP's gapped (non-prelim): 127
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)