ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2o18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC099322.5| Danio rerio clone 160O3, complete sequence 46 0.14
2emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in ... 46 0.14
3gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, ... 46 0.14
4gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68... 46 0.14
5emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 44 0.55
6emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in... 42 2.2
7ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed ge... 42 2.2
8ref|XM_815358.1| Trypanosoma cruzi strain CL Brener dispersed ge... 42 2.2
9ref|XM_670739.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.2
10ref|XM_662467.1| Cryptosporidium hominis TU502 hect domain and R... 42 2.2
11emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 42 2.2
12tpg|BK001273.1| TPA: TPA_exp: Mycoplasma fermentans strain PG18 ... 42 2.2
13emb|BX323035.8| Zebrafish DNA sequence from clone DKEYP-94H10 in... 42 2.2
14gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Ca... 42 2.2
15gb|AY168962.1| Mycoplasma fermentans strain PG18 integrative con... 42 2.2
16gb|AY168961.1| Mycoplasma fermentans strain PG18 integrative con... 42 2.2
17gb|AY168953.1| Mycoplasma fermentans strain PG18 LicA (licA), an... 42 2.2
18emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 ... 42 2.2
19ref|XM_632314.1| Dictyostelium discoideum hypothetical protein (... 40 8.5
20gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, com... 40 8.5
21gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, comp... 40 8.5
22ref|NM_008731.1| Mus musculus neuropeptide Y receptor Y2 (Npy2r)... 40 8.5
23gb|AC158951.5| Mus musculus chromosome 8, clone RP23-265B11, com... 40 8.5
24gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome ... 40 8.5
25gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosom... 40 8.5
26ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 8.5
27ref|XM_799313.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 8.5
28emb|AL441963.7| Human DNA sequence from clone RP11-280O24 on chr... 40 8.5
29gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, compl... 40 8.5
30gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete... 40 8.5
31ref|XM_961033.1| Plasmodium falciparum 3D7 hypothetical protein ... 40 8.5
32ref|XM_546032.2| PREDICTED: Canis familiaris similar to centrin ... 40 8.5
33gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, compl... 40 8.5
34gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 ma... 40 8.5
35emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chr... 40 8.5
36gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence 40 8.5
37emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on ch... 40 8.5
38gb|AC025029.16| Homo sapiens 3 BAC RP11-442C9 (Roswell Park Canc... 40 8.5
39emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chro... 40 8.5
40emb|CR407563.8| Zebrafish DNA sequence from clone DKEY-252G21 in... 40 8.5
41gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosom... 40 8.5
42emb|CR382399.1| Plasmodium falciparum chromosome 6, complete seq... 40 8.5
43emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 40 8.5
44gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome... 40 8.5
45emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in... 40 8.5
46gb|AC083908.19| Homo sapiens 3 BAC RP11-431K13 (Roswell Park Can... 40 8.5
47gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, comp... 40 8.5
48gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, com... 40 8.5
49gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 40 8.5
50gb|AC016636.6| Homo sapiens chromosome 5 clone RP11-313P15, comp... 40 8.5
51gb|AC160566.2| Pan troglodytes BAC clone CH251-353L1 from chromo... 40 8.5
52gb|DP000033.1| Carollia perspicillata target 116 genomic scaffold 40 8.5
53emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 40 8.5
54emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in ... 40 8.5
55gb|BC096780.1| Danio rerio cryptochrome 2b, mRNA (cDNA clone MGC... 40 8.5
56gb|AC154778.2| Mus musculus BAC clone RP24-459I17 from chromosom... 40 8.5
57dbj|AK049892.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.5
58gb|AC012331.9| Homo sapiens chromosome 22 clone b41c4 map 22q11,... 40 8.5
59gb|AC000027.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 61e1... 40 8.5
60gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 ... 40 8.5
61dbj|AK018543.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 8.5
62emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in... 40 8.5
63dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
64gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-34... 40 8.5
65gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromo... 40 8.5
66gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27... 40 8.5
67gb|AC013442.11| Homo sapiens BAC clone RP11-387M19 from 2, compl... 40 8.5
68gb|AC110765.5| Homo sapiens BAC clone RP11-69L1 from 2, complete... 40 8.5
69gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, compl... 40 8.5
70gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, comp... 40 8.5
71gb|AC117729.9| Mus musculus chromosome 8, clone RP24-126M11, com... 40 8.5
72emb|BX324138.6| Zebrafish DNA sequence from clone CH211-127F10 i... 40 8.5
73emb|CT573340.5| Zebrafish DNA sequence from clone RP71-1M22 in l... 40 8.5
74dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
75dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
76gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, comp... 40 8.5
77gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.5
78ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 8.5
79gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome... 40 8.5
80emb|AL807393.10| Mouse DNA sequence from clone RP23-142A9 on chr... 40 8.5
81emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chr... 40 8.5
82gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
83gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Ca... 40 8.5
84dbj|D86238.1| Mus musculus mRNA for neuropeptideY-Y2 receptor, c... 40 8.5
85dbj|D87014.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 8.5 
>gb|AC099322.5| Danio rerio clone 160O3, complete sequence
          Length = 100882

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 444   ctatactaaatcaaataaatatt 466
             |||||||||||||||||||||||
Sbjct: 28731 ctatactaaatcaaataaatatt 28709
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>emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in linkage group 24,
              complete sequence
          Length = 210504

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 444    ctatactaaatcaaataaatatt 466
              |||||||||||||||||||||||
Sbjct: 134793 ctatactaaatcaaataaatatt 134815
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>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02,
              complete sequence
          Length = 172479

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 36     aataaattcaatacaaaaattgt 58
              |||||||||||||||||||||||
Sbjct: 114009 aataaattcaatacaaaaattgt 113987
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>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete
              sequence
          Length = 260027

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 36     aataaattcaatacaaaaattgt 58
              |||||||||||||||||||||||
Sbjct: 130921 aataaattcaatacaaaaattgt 130899
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 294    agatccttttctgtgtgaacaa 315
              ||||||||||||||||||||||
Sbjct: 226137 agatccttttctgtgtgaacaa 226116
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>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete
              sequence
          Length = 230648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    actgacagtgtgataatctaa 139
              |||||||||||||||||||||
Sbjct: 147956 actgacagtgtgataatctaa 147936
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>ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509287.240) partial mRNA
          Length = 10392

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  tcccacatttactacaactct 445
            |||||||||||||||||||||
Sbjct: 5701 tcccacatttactacaactct 5721
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>ref|XM_815358.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508139.140) partial mRNA
          Length = 10371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  tcccacatttactacaactct 445
            |||||||||||||||||||||
Sbjct: 5689 tcccacatttactacaactct 5709
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>ref|XM_670739.1| Plasmodium berghei strain ANKA hypothetical protein (PB000888.01.0)
            partial mRNA
          Length = 3246

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 34   taaataaattcaatacaaaaattgt 58
            |||||||||| ||||||||||||||
Sbjct: 2617 taaataaattaaatacaaaaattgt 2593
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>ref|XM_662467.1| Cryptosporidium hominis TU502 hect domain and RLD 2 (Chro.30046)
            partial mRNA
          Length = 5637

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 274  ttttctgaatgaacccactga 294
            |||||||||||||||||||||
Sbjct: 1611 ttttctgaatgaacccactga 1631
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     caagaagatttgtaaataaat 42
              |||||||||||||||||||||
Sbjct: 599227 caagaagatttgtaaataaat 599247
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>tpg|BK001273.1| TPA: TPA_exp: Mycoplasma fermentans strain PG18 composite integrative
            conjugal element ICEF-II, partial sequence
          Length = 17111

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 447  tactaaatcaaataaatattc 467
            |||||||||||||||||||||
Sbjct: 7116 tactaaatcaaataaatattc 7096
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>emb|BX323035.8| Zebrafish DNA sequence from clone DKEYP-94H10 in linkage group 2,
             complete sequence
          Length = 147640

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   atttaaatataaacactgaca 125
             |||||||||||||||||||||
Sbjct: 51554 atttaaatataaacactgaca 51574
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>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160095

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 435   actacaactctatactaaatcaaat 459
             ||||||||| |||||||||||||||
Sbjct: 42115 actacaactatatactaaatcaaat 42091
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>gb|AY168962.1| Mycoplasma fermentans strain PG18 integrative conjugal element
            ICEF-II internal fragment N2, partial sequence
          Length = 2847

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 447  tactaaatcaaataaatattc 467
            |||||||||||||||||||||
Sbjct: 1264 tactaaatcaaataaatattc 1244
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>gb|AY168961.1| Mycoplasma fermentans strain PG18 integrative conjugal element
            ICEF-II internal fragment N1, partial sequence
          Length = 4237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 447  tactaaatcaaataaatattc 467
            |||||||||||||||||||||
Sbjct: 3452 tactaaatcaaataaatattc 3432
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>gb|AY168953.1| Mycoplasma fermentans strain PG18 LicA (licA), and LepA (lepA),
             complete cds; insertion sequence ISMi1, partial sequence;
             integrative conjugal element ICEF-IA, complete sequence
          Length = 27891

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   tactaaatcaaataaatattc 467
             |||||||||||||||||||||
Sbjct: 10651 tactaaatcaaataaatattc 10631
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>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5,
             complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   actgacagtgtgataatctaa 139
             |||||||||||||||||||||
Sbjct: 83349 actgacagtgtgataatctaa 83369
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>ref|XM_632314.1| Dictyostelium discoideum hypothetical protein (DDB0187262), partial
           mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 actgttaaaactactattat 556
           ||||||||||||||||||||
Sbjct: 47  actgttaaaactactattat 28
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>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     atttgtaaataaattcaata 48
              ||||||||||||||||||||
Sbjct: 102628 atttgtaaataaattcaata 102609
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>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence
          Length = 253738

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cttttctgtgtgaacaaaat 318
             ||||||||||||||||||||
Sbjct: 85407 cttttctgtgtgaacaaaat 85426
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>ref|NM_008731.1| Mus musculus neuropeptide Y receptor Y2 (Npy2r), mRNA
          Length = 3379

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttttctgtgtgaacaaaat 318
            ||||||||||||||||||||
Sbjct: 2732 cttttctgtgtgaacaaaat 2713
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>gb|AC158951.5| Mus musculus chromosome 8, clone RP23-265B11, complete sequence
          Length = 191700

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 88     aaattccataaagaactatttaaa 111
              |||||| |||||||||||||||||
Sbjct: 118433 aaattctataaagaactatttaaa 118410
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>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence
          Length = 256476

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   taatgttaatggcctacata 410
             ||||||||||||||||||||
Sbjct: 95830 taatgttaatggcctacata 95811
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>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete
             sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aataaattcaatacaaaaat 55
             ||||||||||||||||||||
Sbjct: 76536 aataaattcaatacaaaaat 76517
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>ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509287.140) partial mRNA
          Length = 10401

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  tcccacatttactacaactc 444
            ||||||||||||||||||||
Sbjct: 5695 tcccacatttactacaactc 5714
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>ref|XM_799313.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
           (DGF-1) (Tc00.1047053507575.10) partial mRNA
          Length = 5392

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 tcccacatttactacaactc 444
           ||||||||||||||||||||
Sbjct: 701 tcccacatttactacaactc 720
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>emb|AL441963.7| Human DNA sequence from clone RP11-280O24 on chromosome 9 Contains a ATP
              synthase, H+ transporting, mitochondrial F0 complex,
              subunit d (ATP5H) (ATPQ, ATP5JD) pseudogene, the 3' end of
              the NFIB gene for nuclear factor I/B (NFIB2, NFIB3,
              NFI-RED) and a ribosomal protein L7a (RPL7A) pseudogene,
              complete sequence
          Length = 159476

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    actaaatcaaataaatattc 467
              ||||||||||||||||||||
Sbjct: 108588 actaaatcaaataaatattc 108607
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>gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, complete sequence
          Length = 184961

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   agttgcatagcaacaacaag 530
             ||||||||||||||||||||
Sbjct: 61261 agttgcatagcaacaacaag 61242
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>gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete sequence
          Length = 214857

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    cttttctgtgtgaacaaaat 318
              ||||||||||||||||||||
Sbjct: 122045 cttttctgtgtgaacaaaat 122064
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>ref|XM_961033.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0675c) partial
           mRNA
          Length = 6462

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ttctttttccataggattca 360
           ||||||||||||||||||||
Sbjct: 369 ttctttttccataggattca 350
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>ref|XM_546032.2| PREDICTED: Canis familiaris similar to centrin 3 (LOC488915), mRNA
          Length = 983

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 caatactgttcatacaaaga 218
           ||||||||||||||||||||
Sbjct: 802 caatactgttcatacaaaga 783
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>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence
          Length = 186208

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aagaactatttaaatataaa 117
              ||||||||||||||||||||
Sbjct: 129995 aagaactatttaaatataaa 129976
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>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence
          Length = 195066

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 511    agttgcatagcaacaacaag 530
              ||||||||||||||||||||
Sbjct: 163321 agttgcatagcaacaacaag 163302
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>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a
              ribosomal protein L31 (RPL31) pseudogene, the BUP gene for
              BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion
              region (mouse) (MGC12685), the 5' end of the SPAG6 gene for
              sperm associated antigen 6 (pf16, MGC26276,
              Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and
              seven CpG islands, complete sequence
          Length = 138094

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    catcctgcacagctatacat 378
              ||||||||||||||||||||
Sbjct: 111369 catcctgcacagctatacat 111388
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>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence
          Length = 226331

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gattgtcatgttgaaatgaa 498
             ||||||||||||||||||||
Sbjct: 46449 gattgtcatgttgaaatgaa 46468
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>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the
              SOX21 gene for SRY (sex determining region Y)-box 21, a
              bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7)
              pseudogene, a ribosomal protein L21 (RPL21) pseudogene and
              2 CpG islands, complete sequence
          Length = 180538

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      taacaggtttgtgcaagaag 28
              ||||||||||||||||||||
Sbjct: 173337 taacaggtttgtgcaagaag 173318
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>gb|AC025029.16| Homo sapiens 3 BAC RP11-442C9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92601

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    agctgttttgaactgtaaat 91
             ||||||||||||||||||||
Sbjct: 29481 agctgttttgaactgtaaat 29500
to top
>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2
             Contains a NADH dehydrogenase 3, mitochondrial (MTND3)
             pseudogene, complete sequence
          Length = 157790

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   aacataatatttaaatgttg 158
             ||||||||||||||||||||
Sbjct: 33565 aacataatatttaaatgttg 33546
to top
>emb|CR407563.8| Zebrafish DNA sequence from clone DKEY-252G21 in linkage group 8,
             complete sequence
          Length = 109914

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 29    atttgtaaataaattcaatacaaaaatt 56
             |||||||||||||| ||||| |||||||
Sbjct: 48976 atttgtaaataaatacaataaaaaaatt 48949
to top
>gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosome 3, complete sequence
          Length = 212795

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ttaaatataaacactgacag 126
              ||||||||||||||||||||
Sbjct: 121107 ttaaatataaacactgacag 121126
to top
>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5
          Length = 348174

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    ttctttttccataggattca 360
              ||||||||||||||||||||
Sbjct: 236155 ttctttttccataggattca 236174
to top
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    tatactaaatcaaataaata 464
              ||||||||||||||||||||
Sbjct: 240225 tatactaaatcaaataaata 240206
to top
>gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome 3, complete sequence
          Length = 206717

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttaaatataaacactgacag 126
              ||||||||||||||||||||
Sbjct: 201509 ttaaatataaacactgacag 201490
to top
>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
              complete sequence
          Length = 209097

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aaataaattcaatacaaaaa 54
              ||||||||||||||||||||
Sbjct: 199421 aaataaattcaatacaaaaa 199402
to top
>gb|AC083908.19| Homo sapiens 3 BAC RP11-431K13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111568

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 489   ttgaaatgaancattatattata 511
             |||||||||| ||||||||||||
Sbjct: 58415 ttgaaatgaatcattatattata 58437
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>gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, complete sequence
          Length = 153232

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aagaactatttaaatataaa 117
              ||||||||||||||||||||
Sbjct: 111220 aagaactatttaaatataaa 111201
to top
>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence
          Length = 173368

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    gtaaataaattcaatacaaaaatt 56
             |||||||||||||||| |||||||
Sbjct: 84089 gtaaataaattcaataaaaaaatt 84066
to top
>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    agtggtttccaaatgaacag 179
              ||||||||||||||||||||
Sbjct: 146374 agtggtttccaaatgaacag 146393
to top
>gb|AC016636.6| Homo sapiens chromosome 5 clone RP11-313P15, complete sequence
          Length = 55579

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   actatttaaatataaacact 121
             ||||||||||||||||||||
Sbjct: 22318 actatttaaatataaacact 22337
to top
>gb|AC160566.2| Pan troglodytes BAC clone CH251-353L1 from chromosome unknown, complete
             sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cttttctgtgtgaacaaaat 318
             ||||||||||||||||||||
Sbjct: 59629 cttttctgtgtgaacaaaat 59610
to top
>gb|DP000033.1| Carollia perspicillata target 116 genomic scaffold
          Length = 347743

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    atactaaatcaaataaatat 465
              ||||||||||||||||||||
Sbjct: 287261 atactaaatcaaataaatat 287242
to top
>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
             sequence
          Length = 278310

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 431   atttactacaactctatactaaat 454
             |||||||||||||||||| |||||
Sbjct: 80111 atttactacaactctatagtaaat 80088
to top
>emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in linkage group 21,
             complete sequence
          Length = 211164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    agatttgtaaataaattcaa 46
             ||||||||||||||||||||
Sbjct: 40102 agatttgtaaataaattcaa 40083
to top
>gb|BC096780.1| Danio rerio cryptochrome 2b, mRNA (cDNA clone MGC:109865
            IMAGE:3817308), complete cds
          Length = 3114

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   agctgttttgaactgtaaat 91
            ||||||||||||||||||||
Sbjct: 2985 agctgttttgaactgtaaat 3004
to top
>gb|AC154778.2| Mus musculus BAC clone RP24-459I17 from chromosome 12, complete sequence
          Length = 155367

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     taaataaattcaatacaaaa 53
              ||||||||||||||||||||
Sbjct: 109073 taaataaattcaatacaaaa 109092
to top
>dbj|AK049892.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630007L14 product:NEUROPEPTIDE Y RECEPTOR
            TYPE 2, full insert sequence
          Length = 3335

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttttctgtgtgaacaaaat 318
            ||||||||||||||||||||
Sbjct: 2709 cttttctgtgtgaacaaaat 2690
to top
>gb|AC012331.9| Homo sapiens chromosome 22 clone b41c4 map 22q11, complete sequence
          Length = 143376

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    gattgtcatgttgaaatgaa 498
              ||||||||||||||||||||
Sbjct: 110601 gattgtcatgttgaaatgaa 110582
to top
>gb|AC000027.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 61e11 In IGLC Region,
             complete sequence
          Length = 39279

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gattgtcatgttgaaatgaa 498
             ||||||||||||||||||||
Sbjct: 25259 gattgtcatgttgaaatgaa 25278
to top
>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region,
            complete sequence
          Length = 151111

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 479  gattgtcatgttgaaatgaa 498
            ||||||||||||||||||||
Sbjct: 6993 gattgtcatgttgaaatgaa 7012
to top
>dbj|AK018543.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
            library, clone:9030607L22 product:NEUROPEPTIDE Y RECEPTOR
            TYPE 2, full insert sequence
          Length = 3336

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttttctgtgtgaacaaaat 318
            ||||||||||||||||||||
Sbjct: 2693 cttttctgtgtgaacaaaat 2674
to top
>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21,
              complete sequence
          Length = 207125

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     agatttgtaaataaattcaa 46
              ||||||||||||||||||||
Sbjct: 125955 agatttgtaaataaattcaa 125936
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 259     tgtgggtttctgttgttttctgaa 282
               |||||||||||||| |||||||||
Sbjct: 5310483 tgtgggtttctgttcttttctgaa 5310506
to top
>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence
          Length = 165591

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    gtaaataaattcaatacaaaaatt 56
             |||||||||||||||| |||||||
Sbjct: 54662 gtaaataaattcaataaaaaaatt 54639
to top
>gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromosome 7, complete
              sequence
          Length = 171501

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     aagaactatttaaatataaa 117
              ||||||||||||||||||||
Sbjct: 170846 aagaactatttaaatataaa 170865
to top
>gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27M3 genomic sequence, complete
             sequence
          Length = 110664

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   aatctaaacataatatttaaatgt 156
             |||||||||||||||||| |||||
Sbjct: 33312 aatctaaacataatattttaatgt 33335
to top
>gb|AC013442.11| Homo sapiens BAC clone RP11-387M19 from 2, complete sequence
          Length = 115484

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    atatttaaatgttgaagtgg 164
              ||||||||||||||||||||
Sbjct: 114797 atatttaaatgttgaagtgg 114778
to top
>gb|AC110765.5| Homo sapiens BAC clone RP11-69L1 from 2, complete sequence
          Length = 100610

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  atatttaaatgttgaagtgg 164
            ||||||||||||||||||||
Sbjct: 1313 atatttaaatgttgaagtgg 1294
to top
>gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, complete sequence
          Length = 170043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    actatttaaatataaacact 121
              ||||||||||||||||||||
Sbjct: 141927 actatttaaatataaacact 141946
to top
>gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, complete sequence
          Length = 185124

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aagaactatttaaatataaa 117
              ||||||||||||||||||||
Sbjct: 107625 aagaactatttaaatataaa 107606
to top
>gb|AC117729.9| Mus musculus chromosome 8, clone RP24-126M11, complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     aaattccataaagaactatttaaa 111
              |||||| |||||||||||||||||
Sbjct: 157317 aaattctataaagaactatttaaa 157340
to top
>emb|BX324138.6| Zebrafish DNA sequence from clone CH211-127F10 in linkage group 18,
              complete sequence
          Length = 173169

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     ttttgaactgtaaattccat 96
              ||||||||||||||||||||
Sbjct: 121767 ttttgaactgtaaattccat 121748
to top
>emb|CT573340.5| Zebrafish DNA sequence from clone RP71-1M22 in linkage group 18,
             complete sequence
          Length = 30343

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    ttttgaactgtaaattccat 96
             ||||||||||||||||||||
Sbjct: 12803 ttttgaactgtaaattccat 12822
to top
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete
              sequence
          Length = 204955

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     taaataaattcaatacaaaa 53
              ||||||||||||||||||||
Sbjct: 177928 taaataaattcaatacaaaa 177947
to top
>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete
             sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cttttctgtgtgaacaaaat 318
             ||||||||||||||||||||
Sbjct: 67260 cttttctgtgtgaacaaaat 67241
to top
>gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, complete sequence
          Length = 210575

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   tatattatagttgcatagca 522
             ||||||||||||||||||||
Sbjct: 76040 tatattatagttgcatagca 76021
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 284     gaacccactgagatccttttctgt 307
               |||| |||||||||||||||||||
Sbjct: 2151171 gaactcactgagatccttttctgt 2151148
to top
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    gattgtcatgttgaaatgaa 498
              ||||||||||||||||||||
Sbjct: 574286 gattgtcatgttgaaatgaa 574305
to top
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence
          Length = 211677

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     atttgtaaataaattcaata 48
              ||||||||||||||||||||
Sbjct: 194833 atttgtaaataaattcaata 194814
to top
>emb|AL807393.10| Mouse DNA sequence from clone RP23-142A9 on chromosome X, complete
              sequence
          Length = 147187

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 334    cacanaattctttttccatagga 356
              |||| ||||||||||||||||||
Sbjct: 115174 cacataattctttttccatagga 115152
to top
>emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chromosome 2, complete
             sequence
          Length = 173345

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ataaagaactatttaaatat 114
             ||||||||||||||||||||
Sbjct: 45596 ataaagaactatttaaatat 45615
to top
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   tgtgggtttctgttgttttctgaa 282
             |||||||||||||| |||||||||
Sbjct: 47184 tgtgggtttctgttcttttctgaa 47207
to top
>gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 221074

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    cataatatttaaatgttgaa 160
              ||||||||||||||||||||
Sbjct: 191867 cataatatttaaatgttgaa 191886
to top
>dbj|D86238.1| Mus musculus mRNA for neuropeptideY-Y2 receptor, complete cds
          Length = 3379

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttttctgtgtgaacaaaat 318
            ||||||||||||||||||||
Sbjct: 2732 cttttctgtgtgaacaaaat 2713
to top
>dbj|D87014.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:61E11
          Length = 39283

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gattgtcatgttgaaatgaa 498
             ||||||||||||||||||||
Sbjct: 25259 gattgtcatgttgaaatgaa 25278


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,191,896
Number of Sequences: 3902068
Number of extensions: 9191896
Number of successful extensions: 215946
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 215478
Number of HSP's gapped (non-prelim): 468
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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