Clone Name | rbasd2o16 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subu... | 30 | 5.5 | 2 | UCN2_RAT (Q91WW1) Urocortin-2 precursor (Urocortin II) (Ucn II) | 30 | 9.4 |
---|
>TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) Length = 359 Score = 30.4 bits (67), Expect = 5.5 Identities = 24/83 (28%), Positives = 31/83 (37%) Frame = +1 Query: 376 RPFGPRKTKTSRPS*KPCHQRGPCRASP*RGTAS*NGSGTASRCALARAQTDFSSAHGRC 555 RP P + P P R CR S GT S G G+ A + +S G C Sbjct: 13 RPPPPTPSLVGLPPPPPSPPRSLCRRSAALGTGSSTGRGSERTPGAAASGAAAASEDGSC 72 Query: 556 GKGSRCCCYHPRHLKKT*CHGSC 624 G C +P ++ CH C Sbjct: 73 G-----CLPNPGTFEE--CHRKC 88
>UCN2_RAT (Q91WW1) Urocortin-2 precursor (Urocortin II) (Ucn II)| Length = 109 Score = 29.6 bits (65), Expect = 9.4 Identities = 21/72 (29%), Positives = 33/72 (45%) Frame = +2 Query: 2 VLVLLILXTQPGLPIVRYSDTPQTKQQAANQS**KHSTVSSRTHGATSKAEAPSNQNKQA 181 V ++L+L PG PI + PQ + S+VSS + T+ + S N +A Sbjct: 8 VFMVLMLDRVPGTPIPTFQLLPQNYPETT------PSSVSSESPSDTTTGPSASWSNSKA 61 Query: 182 PSWTSTRSALAL 217 + TR L+L Sbjct: 62 SPYLDTRVILSL 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,582,314 Number of Sequences: 219361 Number of extensions: 1904619 Number of successful extensions: 4600 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4380 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4593 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)