ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 375 e-101
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 375 e-101
3gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene 212 7e-52
4emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 186 4e-44
5gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 186 4e-44
6gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 186 4e-44
7dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 186 4e-44
8gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II lo... 82 2e-12
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
10gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, comple... 52 0.001
11dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
12emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, ... 48 0.023
13gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, com... 46 0.092
14emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secr... 46 0.092
15gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cance... 44 0.36
16gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
17gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Can... 44 0.36
18gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 44 0.36
19gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 44 0.36
20gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 44 0.36
21emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 44 0.36
22emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 44 0.36
23gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
24gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 44 0.36
25gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 44 0.36
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
28dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
29gb|AC108033.3| Homo sapiens BAC clone RP11-109M22 from 4, comple... 44 0.36
30gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, comp... 44 0.36
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
32gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
33dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 44 0.36
34ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase... 42 1.4
35gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, com... 42 1.4
36gb|AC117233.3| Mus musculus BAC clone RP23-408M8 from 6, complet... 42 1.4
37emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 o... 42 1.4
38emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 i... 42 1.4
39emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in... 42 1.4
40gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Canc... 42 1.4
41gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, com... 42 1.4
42gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X... 42 1.4
43gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, comple... 42 1.4
44gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3... 42 1.4
45gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, co... 42 1.4
46gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, com... 42 1.4
47gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complet... 42 1.4
48emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chr... 42 1.4
49dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.4
50gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome... 40 5.6
51gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, com... 40 5.6
52gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.6
53gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, comp... 40 5.6
54gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240... 40 5.6
55ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamm... 40 5.6
56gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, comp... 40 5.6
57ref|XM_568398.1| Cryptococcus neoformans var. neoformans JEC21 d... 40 5.6
58gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complet... 40 5.6
59gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complet... 40 5.6
60gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.6
61gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, com... 40 5.6
62gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete se... 40 5.6
63emb|AL357373.8| Human DNA sequence from clone RP11-414C16 on chr... 40 5.6
64emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chr... 40 5.6
65emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chro... 40 5.6
66gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence 40 5.6
67gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatibli... 40 5.6
68emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, ... 40 5.6
69gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, comp... 40 5.6
70gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 40 5.6
71gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, comple... 40 5.6
72dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, ... 40 5.6
73gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complet... 40 5.6
74gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 5.6
75dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 40 5.6
76dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.6
77gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, comple... 40 5.6
78emb|BX323811.14| Zebrafish DNA sequence from clone DKEY-234H16 i... 40 5.6
79dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.6
80gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromos... 40 5.6
81gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosom... 40 5.6
82gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 5.6
83gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 5.6
84gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 5.6
85emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in... 40 5.6
86dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 5.6
87emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chr... 40 5.6
88gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.6
89emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H1... 40 5.6
90emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 i... 40 5.6
91gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility grou... 40 5.6
92gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 40 5.6
93gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.6
94gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, ... 40 5.6
95emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 5.6
96emb|AL157375.6| Human DNA sequence from clone RP1-133P16 on chro... 40 5.6
97emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chro... 40 5.6
98gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete seq... 40 5.6
99gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, comple... 40 5.6 
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
            polymerase subunit (rpo) genes
          Length = 21245

 Score =  375 bits (189), Expect = e-101
 Identities = 198/201 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctttcttaatcttatacaatttctcttcctttttcttatagttatacatacaattatgta 60
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5231 ctttcttaatcttatacaatttcccttcctttttcttatagttatacatacaattatgta 5172

                                                                        
Query: 61   tgtattatatgagcaactttctatgggtcacatagacatccaaataagcagtagaagtga 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5171 tgtattatatgaccaactttctatgggtcacatagacatccaaataagcagtagaagtga 5112

                                                                        
Query: 121  gatggggaaaagaggtctgaaataaaaagggaatacaatttatgtatggattccggtaaa 180
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5111 gatggggaaaagaggtctgaaataaaaagggaatacgatttatgtatggattccggtaaa 5052

                                 
Query: 181  ataccggtactctattccata 201
            |||||||||||||||||||||
Sbjct: 5051 ataccggtactctattccata 5031



 Score =  252 bits (127), Expect = 8e-64
 Identities = 169/185 (91%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                        
Query: 240  ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 295
            ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 5031 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 4972

                                                                        
Query: 296  gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 355
            |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 4971 gtctttctttatctttatcgatcgggagtagtgaaaaaaattcctatacgccttccctgc 4912

                                                                        
Query: 356  ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatgggtatttgat 415
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4911 ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtgggtatttgat 4852

                 
Query: 416  cttgc 420
            |||||
Sbjct: 4851 cttgc 4847
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>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  375 bits (189), Expect = e-101
 Identities = 198/201 (98%)
 Strand = Plus / Minus

                                                                         
Query: 1     ctttcttaatcttatacaatttctcttcctttttcttatagttatacatacaattatgta 60
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 16585 ctttcttaatcttatacaatttcccttcctttttcttatagttatacatacaattatgta 16526

                                                                         
Query: 61    tgtattatatgagcaactttctatgggtcacatagacatccaaataagcagtagaagtga 120
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16525 tgtattatatgaccaactttctatgggtcacatagacatccaaataagcagtagaagtga 16466

                                                                         
Query: 121   gatggggaaaagaggtctgaaataaaaagggaatacaatttatgtatggattccggtaaa 180
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16465 gatggggaaaagaggtctgaaataaaaagggaatacgatttatgtatggattccggtaaa 16406

                                  
Query: 181   ataccggtactctattccata 201
             |||||||||||||||||||||
Sbjct: 16405 ataccggtactctattccata 16385



 Score =  252 bits (127), Expect = 8e-64
 Identities = 169/185 (91%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                         
Query: 240   ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 295
             ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 16385 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 16326

                                                                         
Query: 296   gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 355
             |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 16325 gtctttctttatctttatcgatcgggagtagtgaaaaaaattcctatacgccttccctgc 16266

                                                                         
Query: 356   ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatgggtatttgat 415
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16265 ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtgggtatttgat 16206

                  
Query: 416   cttgc 420
             |||||
Sbjct: 16205 cttgc 16201
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>gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene
          Length = 559

 Score =  212 bits (107), Expect = 7e-52
 Identities = 168/186 (90%), Gaps = 7/186 (3%)
 Strand = Plus / Minus

                                                                       
Query: 240 ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 295
           ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 550 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 491

                                                                       
Query: 296 gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 355
           |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 490 gtctttctttatctttatcgatcgggagtagtg-aaaaaattcctatacgccttccctgc 432

                                                                       
Query: 356 ctctttaatgagagatgcaaaataaaaaagtgaagt-aagggtgccctatgggtatttga 414
           |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 431 ctctttaatgagagatgcaaaataaaaaagtgaagtcaagggtg-cctgtgggtatttga 373

                 
Query: 415 tcttgc 420
           ||||||
Sbjct: 372 tcttgc 367
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>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 9     atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 68
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17872 atcttatccaatttcacttcctttttcttatagttatacatacaattatgtatgtattat 17813

                                                               
Query: 69    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 118
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17812 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 17763



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 159   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 218
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17463 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17404

                                       
Query: 219   taagatgaggatggtatcatcataaa 244
             |||||||||| |||||||||||||||
Sbjct: 17403 taagatgagggtggtatcatcataaa 17378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 359   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 417
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17273 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccccatagatatttgatct 17214

                 
Query: 418   tgcc 421
             ||||
Sbjct: 17213 tgcc 17210
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>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 9     atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 68
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79997 atcttatccaatttcccttcctttttcttatagttatacatacaattatgtatgtattat 79938

                                                               
Query: 69    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 118
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 79937 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 79888



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 159   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 218
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 79579 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 79520

                                                                         
Query: 219   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 278
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 79519 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 79465

                                           
Query: 279   ccacatatcgtatgtgtgtctttctttatc 308
             |||| |||  ||||| || ||||| |||||
Sbjct: 79464 ccacgtatgatatgtatgcctttccttatc 79435



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 359   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 417
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 79390 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccccatagatatttgatct 79331

                 
Query: 418   tgcc 421
             ||||
Sbjct: 79330 tgcc 79327
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>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 9     atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 68
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17864 atcttatccaatttcacttcctttttcttatagttatacatacaattatgtatgtattat 17805

                                                               
Query: 69    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 118
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17804 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 17755



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 159   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 218
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17455 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17396

                                       
Query: 219   taagatgaggatggtatcatcataaa 244
             |||||||||| |||||||||||||||
Sbjct: 17395 taagatgagggtggtatcatcataaa 17370



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 359   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 417
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17265 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccccatagatatttgatct 17206

                 
Query: 418   tgcc 421
             ||||
Sbjct: 17205 tgcc 17202
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>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  186 bits (94), Expect = 4e-44
 Identities = 106/110 (96%)
 Strand = Plus / Minus

                                                                         
Query: 9     atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtattat 68
             ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370 atcttatccaatttcccttcctttttcttatagttatacatacaattatgtatgtattat 18311

                                                               
Query: 69    atgagcaactttctatgggtcacatagacatccaaataagcagtagaagt 118
             |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 18310 atgaccaactttctatgggtcacatagacatcccaataagcagtagaagt 18261



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 159   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 218
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17952 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17893

                                                                         
Query: 219   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 278
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 17892 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 17838

                                           
Query: 279   ccacatatcgtatgtgtgtctttctttatc 308
             |||| |||  ||||| || ||||| |||||
Sbjct: 17837 ccacgtatgatatgtatgcctttccttatc 17808



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 359   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 417
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17763 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccccatagatatttgatct 17704

                 
Query: 418   tgcc 421
             ||||
Sbjct: 17703 tgcc 17700
to top
>gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II low MW protein
           (psbM) gene, complete cds; chloroplast
          Length = 653

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 9   atcttatacaatttctcttcctttttcttatagttatacatacaattatgtatgtat 65
           ||||||| |||||||  ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 atcttatccaatttcctttcctttttcttataattatacatacaattatgtatgtat 482
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 379      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
                ||||||||||| ||||||| ||| || |||||||||||||||
Sbjct: 14379908 aaaaaagtgaaataagggtaccccataggtatttgatcttgc 14379949
to top
>gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, complete sequence
          Length = 157779

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 44     atacatacaattatgtatgtattata 69
              ||||||||||||||||||||||||||
Sbjct: 128090 atacatacaattatgtatgtattata 128115
to top
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0022A24
          Length = 148347

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 379    aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
              ||||||||||| ||||||| ||| || |||||||||||||||
Sbjct: 101830 aaaaaagtgaaataagggtaccccataggtatttgatcttgc 101871
to top
>emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, complete sequence
          Length = 174414

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 276    aatccacatatcgtatgtgtgtctttct 303
              ||||||||| ||||||||||||||||||
Sbjct: 174331 aatccacatgtcgtatgtgtgtctttct 174304
to top
>gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, complete sequence
          Length = 41781

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 44   atacatacaattatgtatgtattatat 70
            |||||| ||||||||||||||||||||
Sbjct: 5561 atacatccaattatgtatgtattatat 5587
to top
>emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secreted gel-forming mucin,
           exons 39-47
          Length = 4200

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 44  atacatacaattatgtatgtattatat 70
           |||||| ||||||||||||||||||||
Sbjct: 87  atacatccaattatgtatgtattatat 113
to top
>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197962

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    atacatacaattatgtatgtat 65
             ||||||||||||||||||||||
Sbjct: 30595 atacatacaattatgtatgtat 30616
to top
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 379    aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
              ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 103600 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 103641
to top
>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 44     atacatacaattatgtatgtat 65
              ||||||||||||||||||||||
Sbjct: 119005 atacatacaattatgtatgtat 118984
to top
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16413 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16372
to top
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16413 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16372
to top
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16344 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16303
to top
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16410 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16369
to top
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 99763 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 99722
to top
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 14632 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 14591
to top
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 89565 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 89524
to top
>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 13    tatacaatttctcttcctttttctta 38
             |||||||||| |||||||||||||||
Sbjct: 38236 tatacaatttttcttcctttttctta 38261
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 379     aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
               ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 9245642 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 9245601



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 379     aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
               ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 9141737 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 9141696
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 379      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 13970763 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 13970804
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 379      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 10308240 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 10308199



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 99       tccaaataagcagtagaagt 118
                ||||||||||||||||||||
Sbjct: 17016496 tccaaataagcagtagaagt 17016515
to top
>gb|AC108033.3| Homo sapiens BAC clone RP11-109M22 from 4, complete sequence
          Length = 84994

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 37    tatagttatacatacaattatgtatgtattatat 70
             |||||||||||||| |||| ||| ||||||||||
Sbjct: 43030 tatagttatacatataattgtgtttgtattatat 42997
to top
>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 13    tatacaatttctcttcctttttctta 38
             |||||||||| |||||||||||||||
Sbjct: 52088 tatacaatttttcttcctttttctta 52063
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 379      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 10314279 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 10314238



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 99       tccaaataagcagtagaagt 118
                ||||||||||||||||||||
Sbjct: 17025536 tccaaataagcagtagaagt 17025555
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 379      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 14052765 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 14052806
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 379   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 420
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16351 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16310
to top
>ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase (DDB0185180), partial
            mRNA
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  tctttctttatctttatcgat 317
            |||||||||||||||||||||
Sbjct: 2700 tctttctttatctttatcgat 2680
to top
>gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, complete sequence
          Length = 87532

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 43    tatacatacaattatgtatgtatta 67
             |||||||||| ||||||||||||||
Sbjct: 49163 tatacatacatttatgtatgtatta 49187
to top
>gb|AC117233.3| Mus musculus BAC clone RP23-408M8 from 6, complete sequence
          Length = 187083

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 42     ttatacatacaattatgtatgtatt 66
              ||||||||| |||||||||||||||
Sbjct: 144403 ttatacatagaattatgtatgtatt 144379
to top
>emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 on chromosome 6q16.3-21
             Contains a novel gene and a chromatin assembly factor 1
             p60 subunit (CHAF1B) pseudogene, complete sequence
          Length = 136299

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 369   gatgcaaaataaaaaagtgaa 389
             |||||||||||||||||||||
Sbjct: 26919 gatgcaaaataaaaaagtgaa 26939
to top
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17,
             complete sequence
          Length = 161999

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    atttctcttcctttttcttat 39
             |||||||||||||||||||||
Sbjct: 23386 atttctcttcctttttcttat 23366
to top
>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    aataaaaagggaatacaattt 161
              |||||||||||||||||||||
Sbjct: 104271 aataaaaagggaatacaattt 104251
to top
>gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 356   ctctttaatgagagatgcaaaataaaaaa 384
             ||||| |||||||||| ||||||||||||
Sbjct: 47293 ctcttgaatgagagattcaaaataaaaaa 47265
to top
>gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, complete sequence
          Length = 137075

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 41    gttatacatacaattatgtatgtat 65
             |||||||||| ||||||||||||||
Sbjct: 62649 gttatacatataattatgtatgtat 62625
to top
>gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X, complete sequence
          Length = 213793

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 365    gagagatgcaaaataaaaaagtgaa 389
              |||||| ||||||||||||||||||
Sbjct: 170898 gagagaagcaaaataaaaaagtgaa 170922
to top
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence
          Length = 209613

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 293   tgtgtctttctttatctttatcgat 317
             ||||||||||| |||||||||||||
Sbjct: 41546 tgtgtctttctatatctttatcgat 41570
to top
>gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3 gene, complete cds
          Length = 4325

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  tctttctttatctttatcgat 317
            |||||||||||||||||||||
Sbjct: 2885 tctttctttatctttatcgat 2865
to top
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence
          Length = 158329

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 43    tatacatacaattatgtatgtatta 67
             |||||||||| ||||||||||||||
Sbjct: 66666 tatacatacatttatgtatgtatta 66690
to top
>gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, complete sequence
          Length = 173767

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    acatccaaataagcagtagaa 116
             |||||||||||||||||||||
Sbjct: 14839 acatccaaataagcagtagaa 14819
to top
>gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complete sequence
          Length = 189070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 42    ttatacatacaattatgtatgtatt 66
             ||||||||| |||||||||||||||
Sbjct: 87335 ttatacatagaattatgtatgtatt 87311
to top
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete
             sequence
          Length = 203623

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    tcttcctttttcttatagtta 44
             |||||||||||||||||||||
Sbjct: 27584 tcttcctttttcttatagtta 27564
to top
>dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a,
             complete sequence
          Length = 33254

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    cttcctttttcttatagttat 45
             |||||||||||||||||||||
Sbjct: 15145 cttcctttttcttatagttat 15125
to top
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence
          Length = 216566

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 291    tgtgtgtctttctttatctt 310
              ||||||||||||||||||||
Sbjct: 167733 tgtgtgtctttctttatctt 167714
to top
>gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, complete sequence
          Length = 140252

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tatacatacaattatgtatg 62
             ||||||||||||||||||||
Sbjct: 61591 tatacatacaattatgtatg 61610
to top
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     acaatttctcttcctttttc 35
              ||||||||||||||||||||
Sbjct: 274218 acaatttctcttcctttttc 274199
to top
>gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, complete sequence
          Length = 184088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tacatacaattatgtatgta 64
             ||||||||||||||||||||
Sbjct: 26089 tacatacaattatgtatgta 26070
to top
>gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240357J7, complete
             sequence
          Length = 38387

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   atacaatttatgtatggatt 172
             ||||||||||||||||||||
Sbjct: 25268 atacaatttatgtatggatt 25287
to top
>ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2),
            mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
to top
>gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, complete sequence
          Length = 253338

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     caattatgtatgtattatat 70
              ||||||||||||||||||||
Sbjct: 185523 caattatgtatgtattatat 185504
to top
>ref|XM_568398.1| Cryptococcus neoformans var. neoformans JEC21 delayed-type
            hypersensitivity antigen - related (CNM00910) partial
            mRNA
          Length = 1349

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   acaatttctcttcctttttc 35
            ||||||||||||||||||||
Sbjct: 1156 acaatttctcttcctttttc 1137
to top
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence
          Length = 193725

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tacatacaattatgtatgta 64
             ||||||||||||||||||||
Sbjct: 55175 tacatacaattatgtatgta 55156
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>gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complete sequence
          Length = 194290

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     tcttatacaatttctcttcctttt 33
              |||||||||||||||||| |||||
Sbjct: 146347 tcttatacaatttctctttctttt 146370
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>gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:6817446), partial cds
          Length = 2720

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1865 ctccttccctccctctttaa 1846
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>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence
          Length = 142598

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     acatacaattatgtatgtat 65
              ||||||||||||||||||||
Sbjct: 137116 acatacaattatgtatgtat 137135
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>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     ttctcttcctttttcttata 40
              ||||||||||||||||||||
Sbjct: 100022 ttctcttcctttttcttata 100041
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>emb|AL357373.8| Human DNA sequence from clone RP11-414C16 on chromosome 1 Contains part
             of the DAB1 gene for disabled homolog 1 (Drosophila) and a
             novel pseudogene, complete sequence
          Length = 87340

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    ttatacatacaattatgtatgtat 65
             ||||||||| ||||||||||||||
Sbjct: 44152 ttatacatataattatgtatgtat 44175
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>emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 107328

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 36    ttatagttatacatacaattatgtatgt 63
             ||||| ||||||||| ||||||||||||
Sbjct: 97496 ttataattatacataaaattatgtatgt 97523
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>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the
             5' end of a novel gene, the gene for glutathione
             transferase omega 1 (GSTO1), the 5' end of a variant of
             the gene for a novel glutathione-S-transferase and two CpG
             islands, complete sequence
          Length = 104378

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tccaaataagcagtagaagt 118
             ||||||||||||||||||||
Sbjct: 34653 tccaaataagcagtagaagt 34634
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>gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence
          Length = 220468

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    caattatgtatgtattatat 70
             ||||||||||||||||||||
Sbjct: 42700 caattatgtatgtattatat 42681
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>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 147595

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tcttcctttttcttatagtt 43
             ||||||||||||||||||||
Sbjct: 37210 tcttcctttttcttatagtt 37191
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>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17
          Length = 198176

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    aaataaaaagggaatacaat 159
              ||||||||||||||||||||
Sbjct: 139541 aaataaaaagggaatacaat 139560
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>gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, complete sequence
          Length = 187064

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acatacaattatgtatgtat 65
             ||||||||||||||||||||
Sbjct: 10305 acatacaattatgtatgtat 10286
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>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127439

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   tactccttccctccctcttt 361
             ||||||||||||||||||||
Sbjct: 55969 tactccttccctccctcttt 55988
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>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence
          Length = 219357

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   gaagtgagatggggaaaaga 133
             ||||||||||||||||||||
Sbjct: 14735 gaagtgagatggggaaaaga 14754
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>dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBb
          Length = 80562

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atacatacaattatgtatgt 63
             ||||||||||||||||||||
Sbjct: 79040 atacatacaattatgtatgt 79059
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>gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complete sequence
          Length = 193650

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   tgcaaaataaaaaagtgaag 390
             ||||||||||||||||||||
Sbjct: 21099 tgcaaaataaaaaagtgaag 21080
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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tacaattatgtatgtattat 68
             ||||||||||||||||||||
Sbjct: 66669 tacaattatgtatgtattat 66650
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>dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920194L06 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1859 ctccttccctccctctttaa 1840
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>dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830040H14 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2505

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1851 ctccttccctccctctttaa 1832
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>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence
          Length = 114005

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tacaattatgtatgtattat 68
             ||||||||||||||||||||
Sbjct: 56536 tacaattatgtatgtattat 56555
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>emb|BX323811.14| Zebrafish DNA sequence from clone DKEY-234H16 in linkage group 5,
              complete sequence
          Length = 204094

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 43     tatacatacaattatgtatgtattatat 70
              |||||| |||| ||||||||||||||||
Sbjct: 156448 tatacacacaaatatgtatgtattatat 156421
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>dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330046K02 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1974 ctccttccctccctctttaa 1955
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>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence
          Length = 188174

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     acatacaattatgtatgtat 65
              ||||||||||||||||||||
Sbjct: 145284 acatacaattatgtatgtat 145265
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>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence
          Length = 217099

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ctccttccctccctctttaa 363
              ||||||||||||||||||||
Sbjct: 149173 ctccttccctccctctttaa 149192
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 43    tatacatacaattatgtatgtattatat 70
             ||||||||||| ||||||| ||||||||
Sbjct: 46303 tatacatacaactatgtatatattatat 46330
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>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tccaaataagcagtagaagt 118
             ||||||||||||||||||||
Sbjct: 56988 tccaaataagcagtagaagt 57007
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>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete
              sequence
          Length = 247089

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gaatacaatttatgtatgga 170
              ||||||||||||||||||||
Sbjct: 206498 gaatacaatttatgtatgga 206479
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>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17,
              complete sequence
          Length = 161483

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 235    tcatcataaagaaagatagagtaa 258
              ||||||||||||||| ||||||||
Sbjct: 129596 tcatcataaagaaagttagagtaa 129573
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     atacaatttctcttcctttt 33
              ||||||||||||||||||||
Sbjct: 276286 atacaatttctcttcctttt 276267
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>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete
            sequence
          Length = 205765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 56   atgtatgtattatatgagcaactt 79
            ||||||||| ||||||||||||||
Sbjct: 9266 atgtatgtagtatatgagcaactt 9243
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>gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:4953412), containing frame-shift errors
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1767 ctccttccctccctctttaa 1748
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>emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H19, complete sequence
          Length = 188247

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    aattctactaatccacatat 286
              ||||||||||||||||||||
Sbjct: 115323 aattctactaatccacatat 115304
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>emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 in linkage group 19,
             complete sequence
          Length = 191582

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   gtatgtgtgtctttctttat 307
             ||||||||||||||||||||
Sbjct: 32502 gtatgtgtgtctttctttat 32483
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>gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility group protein (HMG1) gene,
            complete cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  aataggaaattaagatgagg 228
            ||||||||||||||||||||
Sbjct: 1173 aataggaaattaagatgagg 1154
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>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6
          Length = 112629

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aaataaaaagggaatacaat 159
             ||||||||||||||||||||
Sbjct: 76449 aaataaaaagggaatacaat 76468
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>gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone MGC:118107 IMAGE:4936738), complete cds
          Length = 2670

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1846 ctccttccctccctctttaa 1827
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>gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, complete cds
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ctccttccctccctctttaa 363
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    tgtgtgtctttctttatctt 310
              ||||||||||||||||||||
Sbjct: 211524 tgtgtgtctttctttatctt 211543
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>emb|AL157375.6| Human DNA sequence from clone RP1-133P16 on chromosome 6 Contains the
            ARF1 (ADP-ribosylation factor 1) gene, ESTs, STSs and
            GSSs, complete sequence
          Length = 65763

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   acatacaattatgtatgtat 65
            ||||||||||||||||||||
Sbjct: 5944 acatacaattatgtatgtat 5963
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>emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chromosome 9, complete
              sequence
          Length = 243795

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gaatacaatttatgtatgga 170
              ||||||||||||||||||||
Sbjct: 145000 gaatacaatttatgtatgga 144981
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>gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete sequence
          Length = 30767

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  aaaaagggaatacaatttat 163
            ||||||||||||||||||||
Sbjct: 6106 aaaaagggaatacaatttat 6087
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>gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     acatacaattatgtatgtat 65
              ||||||||||||||||||||
Sbjct: 158640 acatacaattatgtatgtat 158621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,612,273
Number of Sequences: 3902068
Number of extensions: 6612273
Number of successful extensions: 177504
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 176824
Number of HSP's gapped (non-prelim): 672
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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