>gb|AY033628.1| Hordeum vulgare subsp. vulgare horcolin mRNA, complete cds
          Length = 665

 Score = 1027 bits (518), Expect = 0.0
 Identities = 527/530 (99%)
 Strand = Plus / Minus

                                                                       
Query: 124 gcagcgtcacacataatcacacacatatgctaaagtgccatgtaaggcacttcacaagtt 183
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gcagcgtcacacattatcccacacatatgctaaagtgccatgtaaggcacttcacaagtt 606

                                                                       
Query: 184 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 546

                                                                       
Query: 244 gaagtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 303
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaggtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 486

                                                                       
Query: 304 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 426

                                                                       
Query: 364 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 366

                                                                       
Query: 424 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 306

                                                                       
Query: 484 acgtagttcgtagcgtctagattaatcgtatcttctgtgccgccagtgccaccccacttg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acgtagttcgtagcgtctagattaatcgtatcttctgtgccgccagtgccaccccacttg 246

                                                                       
Query: 544 atgccggaagagtgttgaacgttatcggtgcccacataggtgaatgcaatagcgtcaacg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atgccggaagagtgttgaacgttatcggtgcccacataggtgaatgcaatagcgtcaacg 186

                                                             
Query: 604 atagctccgctactgacggtcatactaaccatacggatgggctttggctg 653
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atagctccgctactgacggtcatactaaccatacggatgggctttggctg 136

>gb|AY770690.1| Hordeum vulgare horcolin gene, complete cds
          Length = 1338

 Score =  735 bits (371), Expect = 0.0
 Identities = 383/387 (98%)
 Strand = Plus / Minus

                                                                        
Query: 124  gcagcgtcacacataatcacacacatatgctaaagtgccatgtaaggcacttcacaagtt 183
            |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 gcagcgtcacacattatcccacacatatgctaaagtgccatgtaaggcacttcacaagtt 1279

                                                                        
Query: 184  tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 243
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1278 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcttccagagga 1219

                                                                        
Query: 244  gaagtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 303
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 gaggtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 1159

                                                                        
Query: 304  aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 1099

                                                                        
Query: 364  cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 1039

                                                                        
Query: 424  ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 979

                                       
Query: 484  acgtagttcgtagcgtctagattaatc 510
            |||||||||||||||||||||||||||
Sbjct: 978  acgtagttcgtagcgtctagattaatc 952



 Score =  285 bits (144), Expect = 9e-74
 Identities = 144/144 (100%)
 Strand = Plus / Minus

                                                                       
Query: 510 cgtatcttctgtgccgccagtgccaccccacttgatgccggaagagtgttgaacgttatc 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cgtatcttctgtgccgccagtgccaccccacttgatgccggaagagtgttgaacgttatc 725

                                                                       
Query: 570 ggtgcccacataggtgaatgcaatagcgtcaacgatagctccgctactgacggtcatact 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggtgcccacataggtgaatgcaatagcgtcaacgatagctccgctactgacggtcatact 665

                                   
Query: 630 aaccatacggatgggctttggctg 653
           ||||||||||||||||||||||||
Sbjct: 664 aaccatacggatgggctttggctg 641

>gb|AC107702.12| Mus musculus chromosome 3, clone RP23-391G19, complete sequence
          Length = 219296

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    tcctccagaggagaagtggcc 252
              |||||||||||||||||||||
Sbjct: 156180 tcctccagaggagaagtggcc 156200

>gb|AC013604.9|AC013604 Homo sapiens, clone RP11-10E14, complete sequence
          Length = 167236

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   acacataatcacacacatatg 152
             |||||||||||||||||||||
Sbjct: 70663 acacataatcacacacatatg 70683

>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete
              sequence
          Length = 194418

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    cacacataatcacacacatat 151
              |||||||||||||||||||||
Sbjct: 182036 cacacataatcacacacatat 182016

>gb|AC127305.5| Mus musculus BAC clone RP23-289H23 from 3, complete sequence
          Length = 211760

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    tcctccagaggagaagtggcc 252
              |||||||||||||||||||||
Sbjct: 105977 tcctccagaggagaagtggcc 105997

>emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on chromosome 4, complete
              sequence
          Length = 208131

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    cacacataatcacacacatat 151
              |||||||||||||||||||||
Sbjct: 102177 cacacataatcacacacatat 102197

>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence
          Length = 130493

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   tcacacataatcacacacata 150
             |||||||||||||||||||||
Sbjct: 66801 tcacacataatcacacacata 66821

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     ggaaagcaccagcccgtcca 324
               ||||||||||||||||||||
Sbjct: 2644141 ggaaagcaccagcccgtcca 2644122

>gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, complete sequence
          Length = 167656

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     acatatgatccacacacact 96
              ||||||||||||||||||||
Sbjct: 129631 acatatgatccacacacact 129612

>gb|AC167021.3| Mus musculus BAC clone RP23-152D8 from chromosome 6, complete sequence
          Length = 222021

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    cacacataatcacacacata 150
              ||||||||||||||||||||
Sbjct: 187758 cacacataatcacacacata 187777

>gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, complete sequence
          Length = 187920

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 87591 cacacataatcacacacata 87572

>gb|AC110168.11| Mus musculus chromosome 17, clone RP23-312F5, complete sequence
          Length = 177747

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 41430 cacacataatcacacacata 41449

>gb|AC089991.2| Bos taurus clone RP42-194K3, complete sequence
          Length = 159196

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     ttatacacatgtgcgcatttacac 32
             ||||||||||||| ||||||||||
Sbjct: 15138 ttatacacatgtgtgcatttacac 15115

>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence
          Length = 203696

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ttatacacatgtgcgcatttacac 32
              ||||||||||||| ||||||||||
Sbjct: 181195 ttatacacatgtgtgcatttacac 181172

>gb|AC155298.2| Mus musculus BAC clone RP24-245L7 from chromosome 13, complete sequence
          Length = 178609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 12899 cacacataatcacacacata 12918

>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence
          Length = 205819

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 47976 cacacataatcacacacata 47957

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ttatacacatgtgcgcatttacac 32
              ||||||||||||| ||||||||||
Sbjct: 771699 ttatacacatgtgtgcatttacac 771676

>gb|AC002550.1|HUAC002550 Human Chromosome 16 BAC clone CIT987SK-A-101F10, complete sequence
          Length = 86156

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   gccacctccttcctccagag 241
             ||||||||||||||||||||
Sbjct: 59990 gccacctccttcctccagag 60009

>gb|AC122467.3| Mus musculus BAC clone RP24-311K2 from chromosome 6, complete sequence
          Length = 110480

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 85934 cacacataatcacacacata 85953

>gb|AC117242.3| Mus musculus BAC clone RP24-151P1 from chromosome 6, complete
            sequence
          Length = 209736

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  ccacctccttcctccagagg 242
            ||||||||||||||||||||
Sbjct: 9745 ccacctccttcctccagagg 9726

>gb|AC114009.4| Mus musculus BAC clone RP23-385K2 from 8, complete sequence
          Length = 202089

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   taatcacacacatatgctaaagtg 160
             |||||||||||||||||| |||||
Sbjct: 59374 taatcacacacatatgctgaagtg 59397

>gb|AC107670.10| Mus musculus chromosome 14, clone RP23-54K15, complete sequence
          Length = 202048

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   cacacataatcacacacatatgct 154
             |||||||| |||||||||||||||
Sbjct: 54510 cacacatactcacacacatatgct 54487

>gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, complete sequence
          Length = 206793

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cacacataatcacacacata 150
              ||||||||||||||||||||
Sbjct: 190953 cacacataatcacacacata 190934

>emb|AL512430.14| Human DNA sequence from clone RP11-346C16 on chromosome 6 Contains the
             3' part of gene KIAA1028, a pseudogene similar to
             ribosomal protein S19 (RPS19), a pseudogene similar to
             protein phosphatases, a ribosomal protein S20 (RPS20)
             pseudogene and a CpG island, complete sequence
          Length = 189098

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tcacacataatcacacacat 149
             ||||||||||||||||||||
Sbjct: 13186 tcacacataatcacacacat 13205

>emb|AL356953.17| Human DNA sequence from clone RP11-572A16 on chromosome 1 Contains the
             3' end of a pseudogene similar to Mus musculus protein
             tyrosine phosphatase receptor type V Ptprv, the LGR6 gene
             for leucine-rich repeat-containing G protein-coupled
             receptor 6, the gene for a ubiquitin conjugating enzyme,
             the 5' end of the PPP1R12B gene for protein phosphatase 1
             regulatory (inhibitor) subunit 12B and four CpG islands,
             complete sequence
          Length = 177344

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cacctccttcctccagagga 243
             ||||||||||||||||||||
Sbjct: 25151 cacctccttcctccagagga 25132

>emb|AL049692.13|HSDJ74J1 Human DNA sequence from clone RP1-74J1 on chromosome 11p13 Contains a
             gene for Wilms' tumor associated protein, the WT1 (Wilms
             tumor 1) gene, ESTs, STSs, GSSs and CpG Islands, complete
             sequence
          Length = 127580

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   acaagtttatttattctagc 196
             ||||||||||||||||||||
Sbjct: 78642 acaagtttatttattctagc 78661

>gb|AC153013.3| Mus musculus BAC clone RP23-273N8 from chromosome 8, complete sequence
          Length = 196609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    taatcacacacatatgctaaagtg 160
              |||||||||||||||||| |||||
Sbjct: 172817 taatcacacacatatgctgaagtg 172840

>emb|BX547992.4| Zebrafish DNA sequence from clone DKEY-225I9 in linkage group 3, complete
              sequence
          Length = 181320

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    tcccaaatttacccactgtc 468
              ||||||||||||||||||||
Sbjct: 143598 tcccaaatttacccactgtc 143579

>gb|AY245105.1| Homo sapiens Wilms tumor 1 (WT1) gene, complete cds
          Length = 50678

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   acaagtttatttattctagc 196
             ||||||||||||||||||||
Sbjct: 26633 acaagtttatttattctagc 26652

>gb|AC127287.4| Mus musculus BAC clone RP23-345G7 from chromosome 7, complete sequence
          Length = 209901

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 131    cacacataatcacacacatatgctaaag 158
              |||||| || ||||||||||||||||||
Sbjct: 154833 cacacacaaacacacacatatgctaaag 154860

>emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chromosome 2, complete
              sequence
          Length = 196744

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    acttcacaagtttatttatt 191
              ||||||||||||||||||||
Sbjct: 122984 acttcacaagtttatttatt 122965

>gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence
          Length = 123805

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tcacacataatcacacacat 149
             ||||||||||||||||||||
Sbjct: 29310 tcacacataatcacacacat 29291

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 564    gttatcggtgcccacataggtgaa 587
              ||||||||||||||| ||||||||
Sbjct: 951391 gttatcggtgcccacttaggtgaa 951414

>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence
          Length = 157682

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   acataatcacacacatatgc 153
             ||||||||||||||||||||
Sbjct: 90416 acataatcacacacatatgc 90397

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 629    taaccatacggatgggctttggct 652
              ||||||||||||| ||||||||||
Sbjct: 473517 taaccatacggattggctttggct 473494

>dbj|AP006418.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23A02, TM0306,
             complete sequence
          Length = 62713

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cacacataatcacacacata 150
             ||||||||||||||||||||
Sbjct: 52267 cacacataatcacacacata 52286

>emb|AL591921.6| Mouse DNA sequence from clone RP23-28O11 on chromosome 15, complete
             sequence
          Length = 116704

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   cctccttcctccagaggagaagtg 249
             |||||||||||||| |||||||||
Sbjct: 83445 cctccttcctccagtggagaagtg 83422


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,691,405
Number of Sequences: 3902068
Number of extensions: 4691405
Number of successful extensions: 83920
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83805
Number of HSP's gapped (non-prelim): 115
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)