ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2o07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 716 0.0
2gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 539 e-150
3ref|XM_469800.1| Oryza sativa (japonica cultivar-group), mRNA 331 2e-87
4dbj|AK101584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 2e-87
5gb|BT017820.1| Zea mays clone EL01N0508A02.c mRNA sequence 244 3e-61
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 2e-44
7gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom... 188 2e-44
8gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome... 188 2e-44
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
10gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 155 2e-34
11gb|AY110538.1| Zea mays CL31562_-1 mRNA sequence 145 2e-31
12emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on ch... 44 0.60
13emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chr... 44 0.60
14gb|AF327184.1|AF327184S1 Mus musculus inducible costimulatory pr... 44 0.60
15emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chrom... 44 0.60
16gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosom... 42 2.4
17gb|AC139157.4| Mus musculus BAC clone RP24-152G20 from chromosom... 42 2.4
18gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosom... 42 2.4
19emb|Z49417.1|SCYJL142C S.cerevisiae chromosome X reading frame O... 42 2.4
20emb|X87371.1|SCX731 S.cerevisiae DNA from chromosome X (cosmids ... 42 2.4
21emb|X16056.1|SCYAK1 Yeast YAK1 gene for Yak1 kinase 42 2.4
22gb|S74018.1| SMS1=Sms1p [Saccharomyces cerevisiae, Genomic, 971 nt] 42 2.4
23gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, comp... 42 2.4
24emb|Z49418.1|SCYJL143W S.cerevisiae chromosome X reading frame O... 42 2.4
25emb|X77796.1|SCMPI2 S.cerevisiae tim17 gene 42 2.4
26gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 9.3
27ref|NM_183848.1| Oryza sativa (japonica cultivar-group), predic... 40 9.3
28gb|AY431657.1| Aedes aegypti ASAP ID: 42970 unknown mRNA sequence 40 9.3
29emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 i... 40 9.3
30emb|AL136321.5| Human DNA sequence from clone RP11-31E23 on chro... 40 9.3
31emb|X71785.1|CCBTUB1B C.crispus gene for beta-tubulin 1 40 9.3
32emb|BX957221.1| Methanococcus maripaludis S2 complete genome; se... 40 9.3
33emb|BX323069.12| Zebrafish DNA sequence from clone DKEYP-69D2 in... 40 9.3
34gb|AC107612.4| Homo sapiens X BAC RP11-265D5 (Roswell Park Cance... 40 9.3
35gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, compl... 40 9.3
36gb|AC096631.2| Homo sapiens chromosome 1 clone RP11-16L9, comple... 40 9.3
37gb|DQ311344.1| Bombyx mori calcitonin gene-related peptide-recep... 40 9.3
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
39gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, comple... 40 9.3
40gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosom... 40 9.3
41gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, comple... 40 9.3
42gb|AC012076.5| Homo sapiens BAC clone RP11-497D24 from 2, comple... 40 9.3
43dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
44dbj|AK101813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
45dbj|AK062175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
46emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 i... 40 9.3
47gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, comple... 40 9.3
48gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complet... 40 9.3 
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score =  716 bits (361), Expect = 0.0
 Identities = 390/401 (97%), Gaps = 1/401 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaatgcgaagcttgcccctcacgtgtcattacaactggccccaatcgaccagactcacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6682 aaatgcgaagcttgcccctcacgtgtcattacaactggccccaatcgaccagactcacca 6623

                                                                        
Query: 61   taacaaagccttggagttcaaaagaatagaaattgaatacatctgatctcttggtttata 120
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6622 taacaaagccttggagttcaaaagaatagaaatcgaatacatctgatctcttggtttata 6563

                                                                        
Query: 121  tgagcattctgcctaacccatagctgtcactagaggcagcagctaatacgagcctcaaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6562 tgagcattctgcctaacccatagctgtcactagaggcagcagctaatacgagcctcaaat 6503

                                                                        
Query: 181  attccgccnnnnnnnntaccctccaggggcaccaaagcttgtaagaaccactgtctagct 240
            ||||||||        ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6502 attccgccaaaaaaaataccctccaggggcaccaaagtttgtaagaaccactgtctagct 6443

                                                                        
Query: 241  atcaagtcagcgagaaacagagcttcag-tgggtgtcaccgatgccttcttgtagtattg 299
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6442 atcaagtcagcgagaaacagagcttcaggtgggtgtcaccgatgccttcttgtagtattg 6383

                                                                        
Query: 300  ttgcttttaggctaccaacaaaacttccagcgttttttgcaggaaccacataaggagatg 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6382 ttgcttttaggctaccaacaaaacttccagcgttttttgcaggaaccacataaggagatg 6323

                                                     
Query: 360  tcgggcgactcaggcctcttcaactttagcacatacacgct 400
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6322 tcgggcgactcaggcctcttcaactttagcacatacacgct 6282



 Score =  297 bits (150), Expect = 2e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                        
Query: 401  ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 5266

                                                                        
Query: 461  ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 5206

                                          
Query: 521  cactggcttttggcttgttgatattaacct 550
            ||||||||||||||||||||||||||||||
Sbjct: 5205 cactggcttttggcttgttgatattaacct 5176



 Score =  258 bits (130), Expect = 2e-65
 Identities = 133/134 (99%)
 Strand = Plus / Minus

                                                                        
Query: 547  acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 4322

                                                                        
Query: 607  gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 4262

                          
Query: 667  ttatcattcaaacg 680
            ||||||| ||||||
Sbjct: 4261 ttatcatccaaacg 4248
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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score =  539 bits (272), Expect = e-150
 Identities = 371/402 (92%), Gaps = 6/402 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaatgcgaagcttgcccctcacgtgtcattacaactggccccaatcgaccagactcacca 60
             ||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| || 
Sbjct: 34159 aaatgggaagcttgcccctaacgtgtcattacaactggtcccaatcgaccagactcgccg 34100

                                                                         
Query: 61    taacaaagccttggagttcaaaagaatagaaattgaatacatctgatctcttggtttata 120
             ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 34099 taacaaagccttggagttcaaaagaatagaaatcgaatacatctgatctctcggtttata 34040

                                                                         
Query: 121   tgagcattctgcctaacccatagctgtcactagaggcagcagctaatacgagcctcaaat 180
             |||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||
Sbjct: 34039 tgagcattctgcctaatccatagctgtcactagaggcagc---taatacgagcctcaaat 33983

                                                                         
Query: 181   attccgccnnnnnnnn-taccctccaggggcaccaaagcttgtaagaaccactgtctagc 239
             ||||||||         ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 33982 attccgccaaaaaaatataccctccaggggcaccaaagtttgtaagaaccactgtctagc 33923

                                                                         
Query: 240   tatcaagtcagcgagaaacagagcttca-gtgggtgtcaccgatgccttcttgtagtatt 298
             |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 33922 tatcaagtcagcgagaaacagagcttcaggtgggtgtcactgatgccttcttgtagtatt 33863

                                                                         
Query: 299   gttgcttttaggctaccaacaaaacttccagcgttttttgcaggaaccacataaggagat 358
             ||||| ||| |||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 33862 gttgcatttcggctaccaacaaaaattccagcg-tctttgcaggaaccacataaggagat 33804

                                                       
Query: 359   gtcgggcgactcaggcctcttcaactttagcacatacacgct 400
             ||| | ||||||||||||||||||||||||||||||| ||||
Sbjct: 33803 gtcagccgactcaggcctcttcaactttagcacatacgcgct 33762



 Score =  252 bits (127), Expect = 1e-63
 Identities = 133/135 (98%)
 Strand = Plus / Minus

                                                                         
Query: 405   gtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttgggcc 464
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 33055 gtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttggacc 32996

                                                                         
Query: 465   taaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactacttcact 524
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 32995 taaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactacctcact 32936

                            
Query: 525   ggcttttggcttgtt 539
             |||||||||||||||
Sbjct: 32935 ggcttttggcttgtt 32921



 Score =  246 bits (124), Expect = 8e-62
 Identities = 130/132 (98%)
 Strand = Plus / Minus

                                                                         
Query: 547   acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31983 acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 31924

                                                                         
Query: 607   gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
             |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 31923 gcaatcattccccctgttgcttgaacaccgactattttcaactgactaggagcatcttct 31864

                         
Query: 667   ttatcattcaaa 678
             ||||||||||||
Sbjct: 31863 ttatcattcaaa 31852
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>ref|XM_469800.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1681

 Score =  331 bits (167), Expect = 2e-87
 Identities = 278/315 (88%)
 Strand = Plus / Minus

                                                                        
Query: 366  gactcaggcctcttcaactttagcacatacacgctttaggtattcgtagcatacgatcat 425
            ||||||| ||||||||||||||||||| |  |||||||||||||| |||||||| |||||
Sbjct: 1222 gactcagacctcttcaactttagcacacaagcgctttaggtattcatagcatactatcat 1163

                                                                        
Query: 426  tgatgtaccccaagcagatgagctgaaaaaccttgggcctaaccctctgtagaaaccttt 485
            ||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 1162 tgaggtaccccaagctgatgagctgaaaaatcttggacctaaacctctgtagaaaccttt 1103

                                                                        
Query: 486  ccatccatcttcagcgatcaatcttctaactacttcactggcttttggcttgttgatatt 545
            ||||||||||||||| ||||||||||||||||||||  |||||||||| |||||   |||
Sbjct: 1102 ccatccatcttcagcaatcaatcttctaactacttccatggcttttggtttgttttgatt 1043

                                                                        
Query: 546  aacctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccc 605
            ||||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| ||
Sbjct: 1042 aacctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacc 983

                                                                        
Query: 606  agcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttc 665
            |||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  |||
Sbjct: 982  agcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttc 923

                           
Query: 666  tttatcattcaaacg 680
            |||||||||| ||||
Sbjct: 922  tttatcattccaacg 908
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>dbj|AK101584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050O16, full
            insert sequence
          Length = 1711

 Score =  331 bits (167), Expect = 2e-87
 Identities = 278/315 (88%)
 Strand = Plus / Minus

                                                                        
Query: 366  gactcaggcctcttcaactttagcacatacacgctttaggtattcgtagcatacgatcat 425
            ||||||| ||||||||||||||||||| |  |||||||||||||| |||||||| |||||
Sbjct: 1281 gactcagacctcttcaactttagcacacaagcgctttaggtattcatagcatactatcat 1222

                                                                        
Query: 426  tgatgtaccccaagcagatgagctgaaaaaccttgggcctaaccctctgtagaaaccttt 485
            ||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 1221 tgaggtaccccaagctgatgagctgaaaaatcttggacctaaacctctgtagaaaccttt 1162

                                                                        
Query: 486  ccatccatcttcagcgatcaatcttctaactacttcactggcttttggcttgttgatatt 545
            ||||||||||||||| ||||||||||||||||||||  |||||||||| |||||   |||
Sbjct: 1161 ccatccatcttcagcaatcaatcttctaactacttccatggcttttggtttgttttgatt 1102

                                                                        
Query: 546  aacctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccc 605
            ||||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| ||
Sbjct: 1101 aacctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacc 1042

                                                                        
Query: 606  agcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttc 665
            |||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  |||
Sbjct: 1041 agcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttc 982

                           
Query: 666  tttatcattcaaacg 680
            |||||||||| ||||
Sbjct: 981  tttatcattccaacg 967
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>gb|BT017820.1| Zea mays clone EL01N0508A02.c mRNA sequence
          Length = 1459

 Score =  244 bits (123), Expect = 3e-61
 Identities = 260/306 (84%), Gaps = 6/306 (1%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcaggcctcttcaactttagcacatacacgctttaggtattcgtagcatacgatcattga 428
            |||| ||||||||||||||||||| |  ||||| ||||| ||||||||||| ||||||||
Sbjct: 1014 tcagacctcttcaactttagcacacaagcgcttcaggtactcgtagcatactatcattga 955

                                                                        
Query: 429  tgtaccccaagcagatgagctgaaaaaccttgggcctaaccctctgtagaaacctttcca 488
             | ||||||||| |||||||||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 954  gggaccccaagctgatgagctgaaaaatcttggacccaaccctctgtacaaacctttcca 895

                                                                        
Query: 489  tccatcttcagcgatcaatcttctaactacttcactggcttttggcttgttgatat---- 544
            |||||||||||||||||||||| |||| ||||| |  ||||||||||| ||   ||    
Sbjct: 894  tccatcttcagcgatcaatcttttaacaacttccccagcttttggcttattttcattatc 835

                                                                        
Query: 545  --taacctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgc 602
              |||||||||||||||| |||||||||||||  ||||| | |||| |||||||||| ||
Sbjct: 834  cataacctgcagcctggtcttgattgtatctatgggagtcgtaacaaaagaggtcacagc 775

                                                                        
Query: 603  cccagcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatc 662
             |||||||  || ||||||| |||||||||||| ||||||||||| || |||||||  ||
Sbjct: 774  accagcaaaaatcccccctgatgcttgaacaccaactattttcaattggctaggagcctc 715

                  
Query: 663  ttcttt 668
            ||||||
Sbjct: 714  ttcttt 709
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Minus

                                                                            
Query: 401      ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 460
                |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 30828911 ttaggtattcatagcatactatcattgaggtaccccaagctgatgagctgaaaaatcttg 30828852

                                                                            
Query: 461      ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 520
                | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 30828851 gacctaaacctctgtagaaacctttccatccatcttcagcaatcaatcttctaactactt 30828792

                                   
Query: 521      cactggcttttggcttgtt 539
                |  |||||||||| |||||
Sbjct: 30828791 ccatggcttttggtttgtt 30828773



 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                            
Query: 547      acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
                |||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| |||
Sbjct: 30827992 acctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacca 30827933

                                                                            
Query: 607      gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
                ||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  ||||
Sbjct: 30827932 gcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttct 30827873

                              
Query: 667      ttatcattcaaacg 680
                ||||||||| ||||
Sbjct: 30827872 ttatcattccaacg 30827859



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 366      gactcaggcctcttcaactttagcaca 392
                ||||||| |||||||||||||||||||
Sbjct: 30829301 gactcagacctcttcaactttagcaca 30829275
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>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
              sequence
          Length = 122496

 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                          
Query: 401    ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 460
              |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 114179 ttaggtattcatagcatactatcattgaggtaccccaagctgatgagctgaaaaatcttg 114238

                                                                          
Query: 461    ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 520
              | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 114239 gacctaaacctctgtagaaacctttccatccatcttcagcaatcaatcttctaactactt 114298

                                 
Query: 521    cactggcttttggcttgtt 539
              |  |||||||||| |||||
Sbjct: 114299 ccatggcttttggtttgtt 114317



 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                          
Query: 547    acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
              |||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| |||
Sbjct: 115098 acctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacca 115157

                                                                          
Query: 607    gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
              ||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  ||||
Sbjct: 115158 gcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttct 115217

                            
Query: 667    ttatcattcaaacg 680
              ||||||||| ||||
Sbjct: 115218 ttatcattccaacg 115231



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 366    gactcaggcctcttcaactttagcaca 392
              ||||||| |||||||||||||||||||
Sbjct: 113789 gactcagacctcttcaactttagcaca 113815
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>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial
            sequence
          Length = 65547

 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Minus

                                                                        
Query: 401  ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 460
            |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 6900 ttaggtattcatagcatactatcattgaggtaccccaagctgatgagctgaaaaatcttg 6841

                                                                        
Query: 461  ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 520
            | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6840 gacctaaacctctgtagaaacctttccatccatcttcagcaatcaatcttctaactactt 6781

                               
Query: 521  cactggcttttggcttgtt 539
            |  |||||||||| |||||
Sbjct: 6780 ccatggcttttggtttgtt 6762



 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                        
Query: 547  acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
            |||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| |||
Sbjct: 5981 acctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacca 5922

                                                                        
Query: 607  gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
            ||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  ||||
Sbjct: 5921 gcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttct 5862

                          
Query: 667  ttatcattcaaacg 680
            ||||||||| ||||
Sbjct: 5861 ttatcattccaacg 5848



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 366  gactcaggcctcttcaactttagcaca 392
            ||||||| |||||||||||||||||||
Sbjct: 7290 gactcagacctcttcaactttagcaca 7264
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Minus

                                                                            
Query: 401      ttaggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttg 460
                |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 30919434 ttaggtattcatagcatactatcattgaggtaccccaagctgatgagctgaaaaatcttg 30919375

                                                                            
Query: 461      ggcctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactactt 520
                | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 30919374 gacctaaacctctgtagaaacctttccatccatcttcagcaatcaatcttctaactactt 30919315

                                   
Query: 521      cactggcttttggcttgtt 539
                |  |||||||||| |||||
Sbjct: 30919314 ccatggcttttggtttgtt 30919296



 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                            
Query: 547      acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
                |||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| |||
Sbjct: 30918515 acctgcagtctggttttgatagtatctatgggagttgtaacacaggatgtcactgcacca 30918456

                                                                            
Query: 607      gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
                ||||  || |||||||| ||||| ||||| |||||| ||||||||||||||| |  ||||
Sbjct: 30918455 gcaataatcccccctgtggcttggacaccaactattgtcaactgactaggagaactttct 30918396

                              
Query: 667      ttatcattcaaacg 680
                ||||||||| ||||
Sbjct: 30918395 ttatcattccaacg 30918382



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 366      gactcaggcctcttcaactttagcaca 392
                ||||||| |||||||||||||||||||
Sbjct: 30919824 gactcagacctcttcaactttagcaca 30919798
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>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score =  155 bits (78), Expect = 2e-34
 Identities = 120/134 (89%)
 Strand = Plus / Minus

                                                                         
Query: 403   aggtattcgtagcatacgatcattgatgtaccccaagcagatgagctgaaaaaccttggg 462
             ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| ||||| 
Sbjct: 10667 aggtactcgtagcatactatcattgaggttccccaagctgatgagctgaaaaatcttgga 10608

                                                                         
Query: 463   cctaaccctctgtagaaacctttccatccatcttcagcgatcaatcttctaactacttca 522
             || ||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||| 
Sbjct: 10607 cccaaccctctgtacaaacctttccatccatcttcagcaatcaatcttttgacaacttcc 10548

                           
Query: 523   ctggcttttggctt 536
             ||||||||||||||
Sbjct: 10547 ctggcttttggctt 10534



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                        
Query: 547  acctgcagcctggttttgattgtatctagaggagttgaaacacaagaggtcactgcccca 606
            |||||||||||||| || ||||||||||  ||||| | |||| |||||||||| || || 
Sbjct: 9841 acctgcagcctggtctttattgtatctatgggagtcgtaacaaaagaggtcacggcaccg 9782

                                                                        
Query: 607  gcaaccattccccctgttgcttgaacaccgactattttcaactgactaggagtatcttct 666
            ||||  |  ||||||| |||||||||||| |||| |||||| || |||||||  ||||||
Sbjct: 9781 gcaaaaaccccccctgatgcttgaacaccaactagtttcaattggctaggagcctcttct 9722

                        
Query: 667  ttatcattcaaa 678
            || |||| ||||
Sbjct: 9721 ttgtcatgcaaa 9710



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   tcaggcctcttcaactttagcaca 392
             |||| |||||||||||||||||||
Sbjct: 11361 tcagacctcttcaactttagcaca 11338
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>gb|AY110538.1| Zea mays CL31562_-1 mRNA sequence
          Length = 626

 Score =  145 bits (73), Expect = 2e-31
 Identities = 143/168 (85%)
 Strand = Plus / Plus

                                                                       
Query: 369 tcaggcctcttcaactttagcacatacacgctttaggtattcgtagcatacgatcattga 428
           |||| ||||||||||||||||||| |  ||||| ||||| | ||||||||| ||||||||
Sbjct: 433 tcagacctcttcaactttagcacacaagcgcttcaggtacttgtagcatactatcattga 492

                                                                       
Query: 429 tgtaccccaagcagatgagctgaaaaaccttgggcctaaccctctgtagaaacctttcca 488
            ||||||||||| |||||||||      ||||| || ||||||||||| |||||||||||
Sbjct: 493 ggtaccccaagctgatgagctgnnnnntcttggacccaaccctctgtacaaacctttcca 552

                                                           
Query: 489 tccatcttcagcgatcaatcttctaactacttcactggcttttggctt 536
           |||||||||||| ||||||||| |||| ||||| |  |||||||||||
Sbjct: 553 tccatcttcagcaatcaatcttttaacaacttccccagcttttggctt 600
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>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete
              sequence
          Length = 250586

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 78     tcaaaagaatagaaattgaata 99
              ||||||||||||||||||||||
Sbjct: 139553 tcaaaagaatagaaattgaata 139532
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>emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chromosome 1 Contains the
             Icos gene for inducible T-cell co-stimulator, complete
             sequence
          Length = 108015

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 78    tcaaaagaatagaaattgaata 99
             ||||||||||||||||||||||
Sbjct: 15376 tcaaaagaatagaaattgaata 15397
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>gb|AF327184.1|AF327184S1 Mus musculus inducible costimulatory protein (Icos) gene, exon 1
          Length = 2705

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 78   tcaaaagaatagaaattgaata 99
            ||||||||||||||||||||||
Sbjct: 1799 tcaaaagaatagaaattgaata 1820
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>emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chromosome 1, complete sequence
          Length = 162143

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 78     tcaaaagaatagaaattgaata 99
              ||||||||||||||||||||||
Sbjct: 128429 tcaaaagaatagaaattgaata 128450
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>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ggagttcaaaagaatagaaattgaa 97
             |||| ||||||||||||||||||||
Sbjct: 51021 ggagatcaaaagaatagaaattgaa 51045
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>gb|AC139157.4| Mus musculus BAC clone RP24-152G20 from chromosome 18, complete sequence
          Length = 133869

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 73     ggagttcaaaagaatagaaattgaa 97
              |||| ||||||||||||||||||||
Sbjct: 105684 ggagatcaaaagaatagaaattgaa 105708
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>gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosome 17, complete
             sequence
          Length = 149770

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ggagttcaaaagaatagaaattgaa 97
             |||||||||| ||||||||||||||
Sbjct: 67416 ggagttcaaaggaatagaaattgaa 67440
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>emb|Z49417.1|SCYJL142C S.cerevisiae chromosome X reading frame ORF YJL142c
          Length = 3383

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 521 cactggcttttggcttgttgatatt 545
           |||| ||||||||||||||||||||
Sbjct: 233 cactagcttttggcttgttgatatt 209
to top
>emb|X87371.1|SCX731 S.cerevisiae DNA from chromosome X (cosmids 7,31)
          Length = 40724

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 521   cactggcttttggcttgttgatatt 545
             |||| ||||||||||||||||||||
Sbjct: 16687 cactagcttttggcttgttgatatt 16663
to top
>emb|X16056.1|SCYAK1 Yeast YAK1 gene for Yak1 kinase
          Length = 3599

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 521  cactggcttttggcttgttgatatt 545
            |||| ||||||||||||||||||||
Sbjct: 3374 cactagcttttggcttgttgatatt 3398
to top
>gb|S74018.1| SMS1=Sms1p [Saccharomyces cerevisiae, Genomic, 971 nt]
          Length = 971

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 521 cactggcttttggcttgttgatatt 545
           |||| ||||||||||||||||||||
Sbjct: 848 cactagcttttggcttgttgatatt 824
to top
>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence
          Length = 179005

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   ttaacctgcagcctggttttg 564
             |||||||||||||||||||||
Sbjct: 99471 ttaacctgcagcctggttttg 99491
to top
>emb|Z49418.1|SCYJL143W S.cerevisiae chromosome X reading frame ORF YJL143w
          Length = 1145

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 521  cactggcttttggcttgttgatatt 545
            |||| ||||||||||||||||||||
Sbjct: 1137 cactagcttttggcttgttgatatt 1113
to top
>emb|X77796.1|SCMPI2 S.cerevisiae tim17 gene
          Length = 1889

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 521  cactggcttttggcttgttgatatt 545
            |||| ||||||||||||||||||||
Sbjct: 1601 cactagcttttggcttgttgatatt 1577
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 577     ggagttgaaacacaagaggt 596
               ||||||||||||||||||||
Sbjct: 1093259 ggagttgaaacacaagaggt 1093240
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>ref|NM_183848.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 466 aaccctctgtagaaacctttccatccatcttc 497
           ||||| |||||||||||| |||| ||||||||
Sbjct: 755 aaccccctgtagaaacctctccagccatcttc 724
to top
>gb|AY431657.1| Aedes aegypti ASAP ID: 42970 unknown mRNA sequence
          Length = 307

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 574 agaggagttgaaacacaaga 593
           ||||||||||||||||||||
Sbjct: 8   agaggagttgaaacacaaga 27
to top
>emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 in linkage group 2,
             complete sequence
          Length = 171327

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    tcaaaagaatagaaattgaa 97
             ||||||||||||||||||||
Sbjct: 26742 tcaaaagaatagaaattgaa 26761
to top
>emb|AL136321.5| Human DNA sequence from clone RP11-31E23 on chromosome 1q31.3-32.1
              Contains a novel gene, complete sequence
          Length = 170632

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    tttaggtattcgtagcatac 419
              ||||||||||||||||||||
Sbjct: 152522 tttaggtattcgtagcatac 152503
to top
>emb|X71785.1|CCBTUB1B C.crispus gene for beta-tubulin 1
          Length = 3367

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 aacttccagcgttttttgca 340
           ||||||||||||||||||||
Sbjct: 694 aacttccagcgttttttgca 713
to top
>emb|BX957221.1| Methanococcus maripaludis S2 complete genome; segment 3/5
          Length = 348230

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 324    ttccagcgttttttgcaggaacca 347
              ||||| ||||||||||||||||||
Sbjct: 231214 ttccaacgttttttgcaggaacca 231237
to top
>emb|BX323069.12| Zebrafish DNA sequence from clone DKEYP-69D2 in linkage group 25,
             complete sequence
          Length = 54390

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    caccataacaaagccttgga 75
             ||||||||||||||||||||
Sbjct: 48869 caccataacaaagccttgga 48888
to top
>gb|AC107612.4| Homo sapiens X BAC RP11-265D5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 93889

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   tcattgatgtaccccaagca 441
             ||||||||||||||||||||
Sbjct: 87163 tcattgatgtaccccaagca 87182
to top
>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    agttcaaaagaatagaaatt 94
             ||||||||||||||||||||
Sbjct: 85249 agttcaaaagaatagaaatt 85268
to top
>gb|AC096631.2| Homo sapiens chromosome 1 clone RP11-16L9, complete sequence
          Length = 159322

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   tttaggtattcgtagcatac 419
             ||||||||||||||||||||
Sbjct: 10039 tttaggtattcgtagcatac 10020
to top
>gb|DQ311344.1| Bombyx mori calcitonin gene-related peptide-receptor component
           protein mRNA, complete cds
          Length = 1083

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 tcactggcttttggcttgtt 539
           ||||||||||||||||||||
Sbjct: 340 tcactggcttttggcttgtt 321
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 466      aaccctctgtagaaacctttccatccatcttc 497
                ||||| |||||||||||| |||| ||||||||
Sbjct: 12688301 aaccccctgtagaaacctctccagccatcttc 12688332
to top
>gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, complete sequence
          Length = 130506

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    agttcaaaagaatagaaatt 94
             ||||||||||||||||||||
Sbjct: 90491 agttcaaaagaatagaaatt 90472
to top
>gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosome 8, complete sequence
          Length = 177689

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    tttatatgagcattctgcct 134
              ||||||||||||||||||||
Sbjct: 165949 tttatatgagcattctgcct 165968
to top
>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence
          Length = 190753

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ctgtcactagaggcagcagc 163
              ||||||||||||||||||||
Sbjct: 142918 ctgtcactagaggcagcagc 142899
to top
>gb|AC012076.5| Homo sapiens BAC clone RP11-497D24 from 2, complete sequence
          Length = 212275

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aaaagaatagaaattgaata 99
             ||||||||||||||||||||
Sbjct: 98723 aaaagaatagaaattgaata 98704
to top
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0554D10
          Length = 158723

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 466   aaccctctgtagaaacctttccatccatcttc 497
             ||||| |||||||||||| |||| ||||||||
Sbjct: 55330 aaccccctgtagaaacctctccagccatcttc 55361
to top
>dbj|AK101813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066P16, full
            insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 466  aaccctctgtagaaacctttccatccatcttc 497
            ||||| |||||||||||| |||| ||||||||
Sbjct: 1161 aaccccctgtagaaacctctccagccatcttc 1130
to top
>dbj|AK062175.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C12, full
           insert sequence
          Length = 1331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 466 aaccctctgtagaaacctttccatccatcttc 497
           ||||| |||||||||||| |||| ||||||||
Sbjct: 738 aaccccctgtagaaacctctccagccatcttc 707
to top
>emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 in linkage group 22,
             complete sequence
          Length = 168776

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    tcaaaagaatagaaattgaa 97
             ||||||||||||||||||||
Sbjct: 26025 tcaaaagaatagaaattgaa 26044
to top
>gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, complete sequence
          Length = 190998

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    tttatatgagcattctgcct 134
              ||||||||||||||||||||
Sbjct: 190194 tttatatgagcattctgcct 190175
to top
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    gtcactagaggcagcagcta 165
              ||||||||||||||||||||
Sbjct: 159112 gtcactagaggcagcagcta 159131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,674,896
Number of Sequences: 3902068
Number of extensions: 5674896
Number of successful extensions: 96769
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96579
Number of HSP's gapped (non-prelim): 185
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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