ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd2o05 |
|---|---|
| Clone Library Name | barley_pub |
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog| Length = 461 Score = 172 bits (435), Expect(2) = 3e-46 Identities = 86/161 (53%), Positives = 119/161 (73%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QLE+WA+R G +IV ++ + +V+ + +K+ K EG+++VL DT+GRLHT Sbjct: 300 RAAAIEQLEVWAKRAGVDIV-KKEEGSDPGAVVYEGMKKAKEEGYEVVLVDTAGRLHTKE 358 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+ EL KKVI K P+E LLV+D TTG N +QQAK F + V ITG ++TKLDG+ Sbjct: 359 PLINELRKIKKVIQKFDKEEPSETLLVIDATTGQNAIQQAKVFKEAVDITGIVVTKLDGS 418 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG VV++ EL IP+K VGVGEG++DLQPFDA+A+VEA+ Sbjct: 419 AKGGAVVAICRELKIPIKLVGVGEGIDDLQPFDADAYVEAL 459 Score = 33.5 bits (75), Expect(2) = 3e-46 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = -2 Query: 669 TTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 TT+G L H+ K +G KVL+ AGDTF++++ Sbjct: 275 TTIG--KLAHQLKQKGKKVLLVAGDTFRAAA 303
>FTSY_NEIMC (O30391) Cell division protein ftsY homolog| Length = 421 Score = 162 bits (410), Expect(2) = 6e-42 Identities = 77/161 (47%), Positives = 113/161 (70%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAAR+QL+ W ER + + + + + +V AV+ K G DIVL DT+GRL T Sbjct: 261 RAAAREQLQAWGER--NNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQL 318 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEE+ K+V+ KA+P AP+EI++VLD G N + Q K F+D +G+TG I+TKLDGT Sbjct: 319 HLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGT 378 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+ Sbjct: 379 AKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419 Score = 28.5 bits (62), Expect(2) = 6e-42 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2 Query: 675 GKTT-LG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT +G L F+ +G VL+AAGDTF++++ Sbjct: 233 GKTTSIG--KLAKYFQAQGKSVLLAAGDTFRAAA 264
>FTSY_NEIMB (P57011) Cell division protein ftsY homolog| Length = 421 Score = 162 bits (410), Expect(2) = 6e-42 Identities = 77/161 (47%), Positives = 113/161 (70%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAAR+QL+ W ER + + + + + +V AV+ K G DIVL DT+GRL T Sbjct: 261 RAAAREQLQAWGER--NNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQL 318 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEE+ K+V+ KA+P AP+EI++VLD G N + Q K F+D +G+TG I+TKLDGT Sbjct: 319 HLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGT 378 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+ Sbjct: 379 AKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419 Score = 28.5 bits (62), Expect(2) = 6e-42 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2 Query: 675 GKTT-LG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT +G L F+ +G VL+AAGDTF++++ Sbjct: 233 GKTTSIG--KLAKYFQAQGKSVLLAAGDTFRAAA 264
>FTSY_NEIMA (P57010) Cell division protein ftsY homolog| Length = 421 Score = 162 bits (410), Expect(2) = 6e-42 Identities = 77/161 (47%), Positives = 113/161 (70%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAAR+QL+ W ER + + + + + +V AV+ K G DIVL DT+GRL T Sbjct: 261 RAAAREQLQAWGER--NNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQL 318 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEE+ K+V+ KA+P AP+EI++VLD G N + Q K F+D +G+TG I+TKLDGT Sbjct: 319 HLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGT 378 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+ Sbjct: 379 AKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419 Score = 28.5 bits (62), Expect(2) = 6e-42 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2 Query: 675 GKTT-LG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT +G L F+ +G VL+AAGDTF++++ Sbjct: 233 GKTTSIG--KLAKYFQAQGKSVLLAAGDTFRAAA 264
>FTSY_BACSU (P51835) Cell division protein ftsY homolog| Length = 329 Score = 157 bits (397), Expect(2) = 7e-42 Identities = 80/162 (49%), Positives = 108/162 (66%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RA A +QLE+W ERTG VI + +V+ AV K D+++CDT+GRL Sbjct: 160 RAGAIEQLEVWGERTGVP-VIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKV 218 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL K+VI + +P AP+E+LL LD TTG N + QAKEF+ +TG LTKLDGT Sbjct: 219 NLMKELEKVKRVIEREVPEAPHEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGT 278 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG V+++ +EL IPVK VG+GE V+DLQ FD E++V +F Sbjct: 279 AKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF 320 Score = 33.5 bits (75), Expect(2) = 7e-42 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = -2 Query: 669 TTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 TT+G L H+ K EG V++AAGDTF++ + Sbjct: 135 TTIG--KLAHKMKQEGKSVVLAAGDTFRAGA 163
>FTSY_THEAQ (P83749) Cell division protein ftsY| Length = 303 Score = 161 bits (408), Expect(2) = 4e-41 Identities = 84/161 (52%), Positives = 110/161 (68%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAA QL W +R S VI + ++ AV+ K G+D++ DT+GRLHT + Sbjct: 141 RAAGGTQLSEWGKRL-SIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKH 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEEL K+ IAKA P P E+ LVLD TG N L+QAK+F++ VG+TG I+TKLDGT Sbjct: 200 NLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGT 259 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG ++ +V L +P+KFVGVGEG +DLQPFD EAFVEA+ Sbjct: 260 AKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEAL 300 Score = 26.6 bits (57), Expect(2) = 4e-41 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSS 580 GKTT L ++N G KV+ AGDTF+++ Sbjct: 113 GKTTTI-AKLGRYYQNLGKKVMFCAGDTFRAA 143
>FTSY_ECOLI (P10121) Cell division protein ftsY| Length = 497 Score = 152 bits (384), Expect(2) = 2e-39 Identities = 72/162 (44%), Positives = 110/162 (67%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QL++W +R ++ + A + SV+ A++ K D+++ DT+GRL Sbjct: 333 RAAAVEQLQVWGQRNNIPVIAQHTG-ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKS 391 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEEL +V+ K AP+E++L +D +TG N + QAK F++ VG+TG LTKLDGT Sbjct: 392 HLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGT 451 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG + SV D+ GIP++++GVGE +EDL+PF A+ F+EA+F Sbjct: 452 AKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALF 493 Score = 30.4 bits (67), Expect(2) = 2e-39 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = -2 Query: 669 TTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 TT+G L +F+ +G V++AAGDTF++++ Sbjct: 308 TTIG--KLARQFEQQGKSVMLAAGDTFRAAA 336
>FTSY_NEIGO (P14929) Cell division protein ftsY homolog| Length = 416 Score = 153 bits (387), Expect(2) = 3e-39 Identities = 75/161 (46%), Positives = 111/161 (68%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAAR+QL+ W R + + + + + +V AV+ K DIVL DT+GRL T Sbjct: 257 RAAAREQLQAWGGR--NNVTVISQTTGDSAAVCFDAVQAAKAR-IDIVLADTAGRLPTQL 313 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEE+ K+V+ KA+PGAP+EI++VLD G N + Q K F+D +G+TG I+TKLDGT Sbjct: 314 HLMEEIKKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGT 373 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+ + Sbjct: 374 AKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDRL 414 Score = 28.5 bits (62), Expect(2) = 3e-39 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2 Query: 675 GKTT-LG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT +G L F+ +G VL+AAGDTF++++ Sbjct: 229 GKTTSIG--KLAKYFQAQGKSVLLAAGDTFRAAA 260
>FTSY_MYCHO (O32861) Cell division protein ftsY homolog| Length = 351 Score = 152 bits (383), Expect(2) = 4e-39 Identities = 72/158 (45%), Positives = 111/158 (70%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QLEIWA+R G++IV N+ + +V+ +A+ K + +DI++ DT+GRL Sbjct: 185 RAAAVEQLEIWAKRVGADIVTPNENEVDPAAVVYRAIDIAKSKKYDILIVDTAGRLQNKV 244 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM EL +V+A +P AP+E LLVLD TTG N + QA+ F + +TG ILTK+DGT Sbjct: 245 NLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVFKESTPLTGIILTKMDGT 304 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 ++GG V+++ DE+G+ VK++G+GE V+DL FD ++++ Sbjct: 305 SKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEFDLDSYI 342 Score = 29.6 bits (65), Expect(2) = 4e-39 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT + + +EG KVL+AAGDTF++++ Sbjct: 157 GKTT-SISKIAKKLIDEGKKVLIAAGDTFRAAA 188
>FTSY_MYCTU (P66842) Cell division protein ftsY homolog| Length = 422 Score = 154 bits (388), Expect = 3e-37 Identities = 84/161 (52%), Positives = 109/161 (67%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA DQL+ WA R G+ +V + A SV AV +G G D+VL DT+GRLHT Sbjct: 263 RAAAADQLQTWAARVGAAVV-RGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKV 321 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 GLM+EL K+V+ + + +E+LLVLD T G N L QA+ F +VV I+G +LTKLDGT Sbjct: 322 GLMDELDKVKRVVTRR--ASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGT 379 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG V V ELG+PVK VG+GEG +DL PF+ AFV+A+ Sbjct: 380 AKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDAL 420
>FTSY_MYCBO (P66843) Cell division protein ftsY homolog| Length = 422 Score = 154 bits (388), Expect = 3e-37 Identities = 84/161 (52%), Positives = 109/161 (67%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA DQL+ WA R G+ +V + A SV AV +G G D+VL DT+GRLHT Sbjct: 263 RAAAADQLQTWAARVGAAVV-RGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKV 321 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 GLM+EL K+V+ + + +E+LLVLD T G N L QA+ F +VV I+G +LTKLDGT Sbjct: 322 GLMDELDKVKRVVTRR--ASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGT 379 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG V V ELG+PVK VG+GEG +DL PF+ AFV+A+ Sbjct: 380 AKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDAL 420
>FTSY_HAEIN (P44870) Cell division protein ftsY homolog| Length = 414 Score = 143 bits (361), Expect(2) = 4e-37 Identities = 71/162 (43%), Positives = 106/162 (65%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QL++W ER +V + A SV+ A++ DI++ DT+GRL Sbjct: 249 RAAAVEQLQVWGERNHIPVVAQSTGSDSA-SVIFDAMQSAAARNIDILIADTAGRLQNKN 307 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL +V+ K AP+EI+L LD TG N + QAK FN+ VG+TG LTKLDGT Sbjct: 308 NLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGISLTKLDGT 367 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG + ++ D+ +P++++GVGE +EDL+ F+A+ F+EA+F Sbjct: 368 AKGGVIFAIADQFKLPIRYIGVGEKIEDLREFNAKEFIEALF 409 Score = 31.2 bits (69), Expect(2) = 4e-37 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 669 TTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 TT+G L +F+ EG V++AAGDTF++++ Sbjct: 224 TTIG--KLARKFQAEGKSVMLAAGDTFRAAA 252
>FTSY_MYCLE (O33010) Cell division protein ftsY homolog| Length = 430 Score = 152 bits (384), Expect = 9e-37 Identities = 83/161 (51%), Positives = 108/161 (67%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA DQL+ WA R G+E+V + A SV AV +G G D+V+ DT+GRLHT Sbjct: 271 RAAAADQLQTWASRVGAELV-RGVEGADPASVAFDAVDKGIGAGADVVVIDTAGRLHTKV 329 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 GLM+EL K+V+ + A +E+LLVLD T G N L Q + F +VV ITG +LTKLDGT Sbjct: 330 GLMDELDKIKRVVTRR--AAVDEVLLVLDATIGQNGLTQVRVFAEVVDITGAVLTKLDGT 387 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG V + ELG+PVK VG+GEG +DL PF+ FV+A+ Sbjct: 388 AKGGIVFRIQRELGVPVKLVGLGEGPDDLAPFEPAVFVDAL 428
>FTSY_MYCPN (P75362) Cell division protein ftsY homolog| Length = 348 Score = 139 bits (350), Expect(2) = 5e-34 Identities = 71/158 (44%), Positives = 100/158 (63%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RA A QL WA+R G +IV+ N K+ + P+V+ + V++G + +D VLCDTSGRL Sbjct: 176 RAGAVAQLAEWAQRIGCDIVLPNPKE-ETPAVIFRGVQQGIQNEYDFVLCDTSGRLQNKT 234 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM EL +++ K P E LLVLDGTTG + L QAK FN+ +TG ILTK+D + Sbjct: 235 NLMNELKKIYQIVQKVSSAKPQETLLVLDGTTGQSGLAQAKVFNEFTELTGIILTKMDSS 294 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 ++GG ++++ D +PVK +G GE DL FD E +V Sbjct: 295 SKGGIILAIKDLFNLPVKLIGFGETTADLAAFDLEQYV 332 Score = 25.0 bits (53), Expect(2) = 5e-34 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT L + + +VLM AGDTF++ + Sbjct: 148 GKTT-SLAKLADQLTKQNKRVLMVAGDTFRAGA 179
>FTSY_MYCGE (P47539) Cell division protein ftsY homolog| Length = 346 Score = 139 bits (351), Expect(2) = 2e-33 Identities = 72/158 (45%), Positives = 99/158 (62%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RA A +QL WA+ +IV+ N K+ Q P+V+ + VK+G + +D VLCDTSGRL Sbjct: 176 RAGAIEQLNQWAKLLNCDIVLPNPKE-QTPAVIFRGVKKGIDDKYDFVLCDTSGRLQNKL 234 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM EL ++I K P+E LLVLDGT G L QAK FN+ +TG +LTK+DG+ Sbjct: 235 NLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNEFSKLTGIVLTKMDGS 294 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 A+GG ++++ D +PVK +G GE DL FD E +V Sbjct: 295 AKGGIILAIKDMFNLPVKLIGFGEKTSDLAIFDLEKYV 332 Score = 22.7 bits (47), Expect(2) = 2e-33 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = -2 Query: 636 FKNEGAKVLMAAGDTFKSSS 577 F + +VL+ AGDTF++ + Sbjct: 160 FIKQNKRVLLVAGDTFRAGA 179
>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog| Length = 504 Score = 139 bits (349), Expect = 1e-32 Identities = 64/161 (39%), Positives = 104/161 (64%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +Q+++W ER+G ++ + + +V+ + + +++L DT+GRL Sbjct: 341 RAAAVEQVKVWGERSGVPVIANPGQNTDPAAVVYDGISAAQSRNVNLLLVDTAGRLQNKK 400 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL +++I K P A E LLVLD T G N L+QA+ F + ++G +LTKLDG+ Sbjct: 401 NLMDELAKIRRIIDKKAPNATVESLLVLDATLGQNGLRQAEVFAEAAKLSGVVLTKLDGS 460 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG ++V +L +P++F+G GEG+EDL+PF + FVEA+ Sbjct: 461 AKGGVALAVAQQLNLPIRFIGAGEGIEDLRPFSSYEFVEAL 501
>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog| Length = 397 Score = 127 bits (320), Expect(2) = 4e-32 Identities = 69/161 (42%), Positives = 98/161 (60%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA DQL++W E S VI + + SV+ A+K K + DI++ DT+GRLH Sbjct: 231 RAAAIDQLKLWGE-INSVSVITREIGSDPASVVYDAIKIAKLKCIDILIIDTAGRLHNKN 289 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEEL K+VI K E +LVLD G N ++Q K F++ + +TG ++TKLD T Sbjct: 290 NLMEELKKIKRVIHKIDSTISQETMLVLDACIGQNSIKQVKIFHESLNVTGLVITKLDST 349 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG + S+ E IPV+++ GE ED+Q F++ FV AI Sbjct: 350 AKGGVIFSIAQEFLIPVRYISFGEDFEDIQVFNSNIFVNAI 390 Score = 30.4 bits (67), Expect(2) = 4e-32 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTTL L +K +G V++AAGDTF++++ Sbjct: 203 GKTTLI-GKLAKNYKKKGKSVILAAGDTFRAAA 234
>FTSY_RICPR (O05948) Cell division protein ftsY homolog| Length = 303 Score = 126 bits (317), Expect = 5e-29 Identities = 65/161 (40%), Positives = 95/161 (59%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QL W R + ++I A SV +A++ ++ DI+ DT+GRLH N Sbjct: 141 RAAAINQLSSWVHRANA-LLITGKASADPASVAYRAIEESIKQNIDILFIDTAGRLHNNK 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL KVI K AP +L++D TG N Q + FNDV +TG I+TKLDG+ Sbjct: 200 NLMDELSKIVKVIKKLDENAPTHSILIIDAITGQNTYNQIEYFNDVTNLTGLIVTKLDGS 259 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+ G +V V + +PV F+G+GE +EDL+ F+ F ++ Sbjct: 260 AKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIFNRHDFSRSL 300
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 125 bits (313), Expect = 2e-28 Identities = 63/162 (38%), Positives = 101/162 (62%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAA +QL+ + ++ A +V+ AVK K + D+++ DT+GRLH Sbjct: 217 RAAGIEQLQTLGKLNNIPVIAQRSGSDPA-AVIFDAVKSAKSKKIDVLIIDTAGRLHNKL 275 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EEL +VI K AP+E LL++D G N +QQ + F+ + +TG I+TKLDGT Sbjct: 276 HLIEELKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALNLTGIIITKLDGT 335 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG V S+ D+ IP++++G+GE ++DL F+++ F+E+IF Sbjct: 336 AKGGVVFSLADQFQIPIRYIGIGEKMQDLGHFNSQEFIESIF 377
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 121 bits (304), Expect = 2e-27 Identities = 61/162 (37%), Positives = 99/162 (61%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAA +QL+I +R VI + SV AVK + D+++ DT+GRLH Sbjct: 189 RAAGIEQLQILGKRNNIP-VISQSSGSDPASVAFDAVKSAISKKIDVLIIDTAGRLHNKL 247 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EEL +VI K AP+EI+L++D G N ++Q + F+ + +TG ++TKLDGT Sbjct: 248 HLLEELKKMVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMFHKAINLTGLVITKLDGT 307 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG + S+ ++ IP++++G+GE DL F++ F+++IF Sbjct: 308 AKGGVIFSLANQFLIPIRYIGIGEKTTDLVVFNSNDFIKSIF 349
>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)| Length = 454 Score = 121 bits (303), Expect = 2e-27 Identities = 68/161 (42%), Positives = 98/161 (60%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QL+ AER G + ++ A + +AVKR K E D +L DT+GRLH + Sbjct: 135 RPAAMLQLQRLAERVGVPYY-EFEEGLGAVEIARRAVKRAKEESVDYLLLDTAGRLHVDE 193 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL K+V P+EIL V D G L+ AK F++ +G+TG ++TK+DG Sbjct: 194 ELMKELQEIKEVTN------PSEILYVADAMQGQTALETAKTFHERLGLTGVVITKMDGD 247 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG +SV + LG+P+KF+GVGE +ED++PF + + I Sbjct: 248 ARGGLALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQRI 288
>FTSY_HELPY (O25458) Cell division protein ftsY homolog| Length = 293 Score = 117 bits (293), Expect(2) = 3e-26 Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 1/160 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLS-QAVKRGKREGFDIVLCDTSGRLHTN 411 RAAA QL++W E+ +++ + K+ PS L+ ++ + D V DT+GRLH Sbjct: 126 RAAAVKQLQLWGEKLNIQVI--SAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQ 183 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EL + +K L AP L+LDGT G + L QAK F++ + + G I+TKLDG Sbjct: 184 TNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDG 243 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVE 111 T++GG ++SV+ EL +P+ ++G+GE +DL FD E F+E Sbjct: 244 TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIE 283 Score = 21.2 bits (43), Expect(2) = 3e-26 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = -2 Query: 618 KVLMAAGDTFKSSS 577 K L+ AGDTF++++ Sbjct: 116 KALLGAGDTFRAAA 129
>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291| Length = 409 Score = 109 bits (272), Expect(2) = 4e-26 Identities = 65/162 (40%), Positives = 96/162 (59%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RA A +QLE A+ G + VI + A + +V+ A++ K G D+VL DT+GR TN Sbjct: 242 RAGAIEQLEQHAKNVGVK-VIKHKPGADSAAVIYDAIQHAKARGIDVVLADTAGRQATNV 300 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LMEE+ KKV+ P+ ++ V D TG + + QA+EFN V I G ILTK+D Sbjct: 301 NLMEEI---KKVVRVT---KPDLVIFVGDALTGNDAVYQAEEFNRAVNIDGIILTKVDAD 354 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG +S+ +G P+ ++GVG+ +DL FDA+ V +F Sbjct: 355 AKGGAALSIGYAIGKPILYLGVGQRYQDLIEFDADWMVRKLF 396 Score = 28.5 bits (62), Expect(2) = 4e-26 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT L ++ K +G V++AAGDTF++ + Sbjct: 214 GKTTTI-AKLAYKLKQKGYSVVLAAGDTFRAGA 245
>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog| Length = 293 Score = 116 bits (290), Expect(2) = 6e-26 Identities = 63/160 (39%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLS-QAVKRGKREGFDIVLCDTSGRLHTN 411 RAAA QL++W E+ +++ + K+ PS L+ ++ + D V DT+GRLH Sbjct: 126 RAAAVKQLQLWGEKLNVQVI--SAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQ 183 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EL +K L AP L+LDGT G + L QAK F++ + + G I+TKLDG Sbjct: 184 TNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDG 243 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVE 111 T++GG ++SV+ EL +P+ ++G+GE +DL FD E F+E Sbjct: 244 TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIE 283 Score = 21.2 bits (43), Expect(2) = 6e-26 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = -2 Query: 618 KVLMAAGDTFKSSS 577 K L+ AGDTF++++ Sbjct: 116 KALLGAGDTFRAAA 129
>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 111 bits (277), Expect = 2e-24 Identities = 60/161 (37%), Positives = 92/161 (57%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QLE ++ + D+ + + QA+++ K E +D V+ DT+GRLH ++ Sbjct: 142 RPAAIKQLETLGKQLDMPVFSLGDQVSPV-EIAKQAIEKAKEEHYDYVILDTAGRLHIDH 200 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL + K++ P EI LV+D TG + + AK FN+ +G+TG +LTKLDG Sbjct: 201 ELMDELTNVKEI------ANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGD 254 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 RGG +S+ P+KF G+GE ++ L+PF E I Sbjct: 255 TRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRI 295
>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast| precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) Length = 564 Score = 110 bits (274), Expect = 5e-24 Identities = 64/152 (42%), Positives = 85/152 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA DQL I E+ G + A + Q +K K+ D+V+ DT+GRL + Sbjct: 216 RPAAIDQLVILGEQVGVPVYTAGTDVKPA-DIAKQGLKEAKKNNVDVVIMDTAGRLQIDK 274 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 G+M+EL KK + P E+LLV+D TG FN +GITG ILTKLDG Sbjct: 275 GMMDELKDVKKFLN------PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGD 328 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 132 +RGG +SV + G P+K VG GE +EDL+PF Sbjct: 329 SRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360
>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 109 bits (273), Expect = 7e-24 Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPS-VLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R AA DQL AE+T S K QAP +AVK K G ++CDT+GRL TN Sbjct: 140 RPAAIDQLATLAEQTESVFFA---KGTQAPDQTTKEAVKTFKESGCQAIICDTAGRLQTN 196 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 LM+ELV+ K + P+EIL+V+DG +G ++ AKEF++ + +TGFI+TKLD Sbjct: 197 QELMDELVAIKNELH------PDEILMVVDGLSGQEIINVAKEFHNRLKLTGFIITKLDS 250 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 AR G +S+ L +P+K +G E + L+ F E I Sbjct: 251 DARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRI 292
>SRP54_SYNP7 (Q55311) Signal sequence-binding protein| Length = 485 Score = 109 bits (273), Expect = 7e-24 Identities = 65/161 (40%), Positives = 90/161 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA DQL ++ V + A + Q V++ ++EG D V+ DT+GRL + Sbjct: 140 RPAAIDQLITLGKQIDVP-VFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDT 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +MEEL K+ IA P+E+LLV+D G + F++ +GITG ILTKLDG Sbjct: 199 EMMEELAQVKEAIA------PHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGD 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 +RGG +S+ G P+KFVG+GE VE LQPF E I Sbjct: 253 SRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRI 293
>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)| Length = 451 Score = 109 bits (272), Expect = 9e-24 Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA +QL+ AE+ I D + ++ + +++ K+ D+++ DT+GR Sbjct: 140 RPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKKA--DVLIIDTAGRHKEEK 197 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITG-FILTKLDG 231 GL+EE+ K++ P+EI+LV+DGT G QAK F + VG G I+TKLDG Sbjct: 198 GLLEEMKQIKEITN------PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDG 251 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 +A+GG +S V E P+KF+G+GEG++DL+PFD + F+ + Sbjct: 252 SAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRL 293
>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 107 bits (266), Expect = 4e-23 Identities = 54/158 (34%), Positives = 95/158 (60%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA +QL++ E+ G E+ + +K + + S A+KR K FD++L D++GRL + Sbjct: 134 RLAAVEQLKVLGEQVGVEVFYEENKSVK--EIASNALKRAKEAQFDVLLVDSAGRLAIDK 191 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL K+++ P+E+L V D +G + ++ A FN+ +G++G +L+K D Sbjct: 192 ELMQELKEVKEILN------PHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSD 245 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 ++GG + + +LG+P++F+G GE + DL F E V Sbjct: 246 SKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIV 283
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 107 bits (266), Expect = 4e-23 Identities = 62/155 (40%), Positives = 90/155 (58%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AAR+QL + E+ G ++ D ++ S+ + ++ + E D++L DT+GRL + Sbjct: 137 RPAAREQLRLLGEKVGVPVLEVMDGESPE-SIRRRVEEKARLEARDLILVDTAGRLQIDE 195 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM EL K+V+ P+E+LLVLD TG L A+ F++ VG+TG +LTKLDG Sbjct: 196 PLMGELARLKEVLG------PDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGD 249 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAE 123 ARGG +S G P+ F GV E E L+PF E Sbjct: 250 ARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPE 284
>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)| Length = 482 Score = 105 bits (263), Expect = 1e-22 Identities = 65/152 (42%), Positives = 84/152 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA DQL+ ++ V D A + Q V++ K G D VL DT+GRL + Sbjct: 140 RPAAIDQLKTLGQQIDVP-VFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDP 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M EL K+V+ P++ LLV+D TG F++ +GITG ILTKLDG Sbjct: 199 QMMAELAEIKQVVK------PDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGD 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 132 RGG +SV G P+KFVGVGE VE LQPF Sbjct: 253 TRGGAALSVRQISGQPIKFVGVGEKVEALQPF 284
>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)| (p48) Length = 453 Score = 105 bits (263), Expect = 1e-22 Identities = 62/161 (38%), Positives = 93/161 (57%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QLE AE+ G + +D + +++ A+K K + +D++L DT+GRLH + Sbjct: 141 RPAAIKQLETLAEQVGVDF-FPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDE 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M+E+ K+V A P E L V+D TG + AK FN+ + +TG +LTK+DG Sbjct: 200 AMMDEI---KQVHASI---NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGD 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG +S+ G P+KF+GVGE E L+PF + I Sbjct: 254 ARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRI 294
>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 105 bits (263), Expect = 1e-22 Identities = 62/161 (38%), Positives = 93/161 (57%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QLE AE+ G + +D + +++ A+K K + +D++L DT+GRLH + Sbjct: 141 RPAAIKQLETLAEQVGVDF-FPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDE 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M+E+ K+V A P E L V+D TG + AK FN+ + +TG +LTK+DG Sbjct: 200 AMMDEI---KQVHASI---NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGD 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG +S+ G P+KF+GVGE E L+PF + I Sbjct: 254 ARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRI 294
>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 105 bits (263), Expect = 1e-22 Identities = 62/161 (38%), Positives = 93/161 (57%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QLE AE+ G + +D + +++ A+K K + +D++L DT+GRLH + Sbjct: 141 RPAAIKQLETLAEQVGVDF-FPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDE 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M+E+ K+V A P E L V+D TG + AK FN+ + +TG +LTK+DG Sbjct: 200 AMMDEI---KQVHASI---NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGD 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG +S+ G P+KF+GVGE E L+PF + I Sbjct: 254 ARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRI 294
>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 104 bits (260), Expect = 2e-22 Identities = 53/158 (33%), Positives = 95/158 (60%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA +QL++ E+ G E+ + +K + + + A+KR K FD+++ D++GRL + Sbjct: 134 RLAAVEQLKVLGEQVGVEVFHEENKSVK--EIANNALKRAKEAQFDVLIVDSAGRLAIDK 191 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM+EL K+V+ P+E+L V D +G + ++ A FN+ +G++G +L+K D Sbjct: 192 ELMQELKEVKEVLN------PHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSD 245 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 ++GG + + +LG+P++F+G GE + DL F E V Sbjct: 246 SKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIV 283
>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)| Length = 448 Score = 103 bits (258), Expect = 4e-22 Identities = 57/161 (35%), Positives = 90/161 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A QL + G E+ D ++K A + + V+ + +G D+++ D++GR Sbjct: 140 RPGAYYQLRQLLDPFGIEVFGDPEEK-DAVKLAREGVEHFREKGVDVIIVDSAGRHKEEK 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 GL+EE+ + I P+E++LV+DGT G QA F + I I+TKLDG+ Sbjct: 199 GLIEEMRQISEAIK------PHEVILVIDGTIGQQAYNQAMAFKEATPIGSIIVTKLDGS 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V G P+KF+G GE ++DL+PFD + FV + Sbjct: 253 AKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRL 293
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 102 bits (254), Expect = 1e-21 Identities = 59/161 (36%), Positives = 87/161 (54%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A QL +R E V N ++ A + + V K +G DI++ DT+GR + Sbjct: 140 RPGAYHQLRQLLDRYHIE-VFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDK 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EE+ VI P+E++LV+DGT G QA F + I I+TKLDG+ Sbjct: 199 ALIEEMKQISNVIH------PHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGS 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V G P+KF+G GE ++D++PFD FV + Sbjct: 253 AKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRL 293
>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)| Length = 447 Score = 102 bits (254), Expect = 1e-21 Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 1/153 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R A +QL ++T +++ +K Q P QA++ K FD+V+ DT+GRL + Sbjct: 142 RPGAIEQLVQLGQKTNTQVF---EKGKQDPVKTAEQALEYAKENNFDVVILDTAGRLQVD 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 LM+EL + KK + PNEILLV+DG +G ++ EFND + ++G ++TKLDG Sbjct: 199 QVLMKELDNLKKKTS------PNEILLVVDGMSGQEIINVTNEFNDKLKLSGVVVTKLDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 132 ARGG +S+ +P+KF+G GEG L F Sbjct: 253 DARGGATLSISYLTKLPIKFIGEGEGYNALAAF 285
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 102 bits (253), Expect = 1e-21 Identities = 64/162 (39%), Positives = 93/162 (57%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA++QL A + ++ I A SV A+ K D+VL DT+GR+H + Sbjct: 213 RAAAQEQLAYHASKLEVQL-IRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDS 271 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EEL K+V+ A P+ +L+LD G + L+QA+ F + VG ILTK+D Sbjct: 272 DLVEEL---KRVLRIA---KPDFRILILDSLAGSDALEQARHFENNVGYDAVILTKVDAD 325 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAIF 102 A+GG +S+ EL PV ++GVG+ +DL PF + FVE IF Sbjct: 326 AKGGIALSLAYELKKPVVYMGVGQNYDDLIPFSPDWFVERIF 367
>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)| Length = 456 Score = 102 bits (253), Expect = 1e-21 Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 2/163 (1%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIV--LCDTSGRLHT 414 R AA DQL+ A ++ D +K + +K G + D+ + DTSGR Sbjct: 137 RYAAYDQLKQIASEVNAKFYGDQSEKDPV-----RLIKHGLEQLKDVAVKIIDTSGRDSM 191 Query: 413 NYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLD 234 + L +E+ K+ +A P+E+L+++D T G +AK FND +G+TG I+TK+D Sbjct: 192 DAELFDEIRRIKEAVA------PDEVLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMD 245 Query: 233 GTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 GTA+GG +S V E+ +P+ F+G GE ++DL+ FD + F+ + Sbjct: 246 GTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRL 288
>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)| Length = 462 Score = 100 bits (248), Expect = 5e-21 Identities = 60/161 (37%), Positives = 88/161 (54%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA QLE A+ G + +D K + A+ K + +D+++ DT+GRLH + Sbjct: 141 RPAAIKQLETLAQSVGVDF-FPSDVKQNPVDIAKSALADAKLKFYDVLIVDTAGRLHVDT 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M+E+ K + AL P E L +D TG + AK FN+ + +TG ILTK+DG Sbjct: 200 EMMDEI----KQVHAALN--PIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGD 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG +S+ G P+KF+GVGE E L+PF + I Sbjct: 254 ARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASRI 294
>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)| Length = 516 Score = 97.8 bits (242), Expect = 3e-20 Identities = 60/152 (39%), Positives = 81/152 (53%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA DQL+ ++ V D + A ++SQ + + K D VL DT+GRL + Sbjct: 142 RPAAIDQLKTLGQQINVP-VFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDE 200 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 LM EL K + PNEILLV+D G A+EFN + +TG ILTK+DG Sbjct: 201 KLMTELRDIKAL------ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGD 254 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 132 RGG +SV G P+KF G GE + D++ F Sbjct: 255 TRGGAALSVRQITGKPIKFTGTGEKITDIETF 286
>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 96.7 bits (239), Expect = 6e-20 Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVIPS----RAAARDQLEIWAE--RTGSEIVIDNDKKA 507 Q S + T + L ++ R + ++ S R AA++QL I A + S ++ +K Sbjct: 111 QGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPL 170 Query: 506 QAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLV 327 ++ +A+ K +D+V+ DT+GR + +MEE ++ KK++ P E LLV Sbjct: 171 D---IVKRAIAEAKISAYDVVIYDTAGRTQIDKAMMEEALAIKKIVE------PTETLLV 221 Query: 326 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 147 +D TG + + A FN+ + I+G IL+++DG ++GG +SV P+KF+ GE + Sbjct: 222 IDSMTGQDAVVTASSFNEKLAISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGENLI 281 Query: 146 DLQPFDAEAFVEAI 105 DL+ FDAE I Sbjct: 282 DLEEFDAERLASRI 295
>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)| Length = 451 Score = 96.7 bits (239), Expect = 6e-20 Identities = 58/161 (36%), Positives = 94/161 (58%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RAAA +QL+I +++ + ++DK + A+K K + +D++L DT+GRLH + Sbjct: 141 RAAAIEQLKILSDQIEIDF-FESDKHHTPIEITKNAIKYAKLKLYDVLLIDTAGRLHIDK 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 +M E+ + VI+KA+ E LL++D G + + AK FN+ + I+G ILTK DG Sbjct: 200 KMMNEIQQIQ-VISKAI-----ETLLIVDSMMGQDAINMAKIFNNDLLISGIILTKTDGD 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 +R G +S+ G P+KF+G GE + L+PF E + I Sbjct: 254 SRSGIALSMRYITGKPIKFIGTGEKIISLEPFHPERIADRI 294
>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)| Length = 487 Score = 95.9 bits (237), Expect(2) = 6e-20 Identities = 58/161 (36%), Positives = 88/161 (54%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 RA A +QL++ A+R G +++ V S+ V+ ++E DI+L DTSGR + Sbjct: 141 RAGAYEQLQMNAKRAGVPF-FGIKEESDPVKVASEGVRTFRKEKNDIILVDTSGRHKQDK 199 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L +E+ S + I P+ I+ V+DG G QAK F D V + I+TKLDG Sbjct: 200 ELFKEMQSVRDAIK------PDSIIFVMDGAIGQAAFGQAKAFKDAVEVGSVIITKLDGH 253 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 + GG +S V P+ F+G GE V +++ FDAE+FV + Sbjct: 254 SNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQL 294 Score = 21.2 bits (43), Expect(2) = 6e-20 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT L +KN G K + DTF++ + Sbjct: 113 GKTTTI-TKLALYYKNRGYKPAVVGADTFRAGA 144
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 96.3 bits (238), Expect = 8e-20 Identities = 56/161 (34%), Positives = 90/161 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A QL+ + E+ D ++K A + + V+ K +G D+++ DT+GR Sbjct: 140 RPGAYHQLKQLLDPYHIEVFGDPNEK-DAIKLAKEGVEHFKAKGVDLIIVDTAGRHKEEK 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EE+ ++I+ + P+E++LV+DGT G QA F + I I+TKLD + Sbjct: 199 DLIEEM----RMISNEIK--PHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSS 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V G P+KF+G GE ++DL+PFD FV + Sbjct: 253 AKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRL 293
>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 95.9 bits (237), Expect = 1e-19 Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKK-AQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R AA +QLE +++T S + A+ A K K + ++CDT+GRL TN Sbjct: 140 RPAAIEQLETLSQQTNSVFFAQGTQPVAKTTKAALSAFKTAKCQ---TIICDTAGRLQTN 196 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 LM+ELVS K + P+EI++V+DG +G ++ A+ F+ + +TGFI++KLD Sbjct: 197 ETLMDELVSVKNELN------PDEIIMVVDGLSGQEIINVAQTFHKRLKLTGFIISKLDS 250 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 AR G +S+ L +P+K +GV E ++ L+ F E I Sbjct: 251 DARAGAALSLASLLQVPIKLIGVSEKLDGLEQFHPERIANRI 292
>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 95.5 bits (236), Expect = 1e-19 Identities = 57/161 (35%), Positives = 89/161 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA +QL AE G + +K A ++ A++ K + D+++ DT+GR Sbjct: 133 RPAAYEQLRQLAEEYGITFYGEKGEK-DAVKIVKNALE--KLKDHDMIIIDTAGRHALED 189 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L++E++ +V P+ LLVLD G +QA+ F++ +GI G I+TK DGT Sbjct: 190 ELIDEMIKIAEV------ARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIITKFDGT 243 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S ++GIP+ F+G GE VED + FD FV + Sbjct: 244 AKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRL 284
>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)| Length = 442 Score = 95.5 bits (236), Expect = 1e-19 Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDND-KKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R AA +QL+ + E G ++ I D + A + + + R +++ D+++ DT+GR Sbjct: 139 RPAALEQLKQYTE--GQDVSIYGDPQNRDALDLAEKGLARFQKK--DVIIFDTAGRHKEE 194 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L+ E+ ++ P+E +LV+DGT G +QA F I I+TKLDG Sbjct: 195 KDLLREMEELSAIVE------PHEAILVIDGTIGQQAREQALAFRKATDIGSIIVTKLDG 248 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 +A+GG +S V E+G P+KF+G GE ++DL+ FD E F+ + Sbjct: 249 SAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRL 290
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 94.7 bits (234), Expect = 2e-19 Identities = 56/161 (34%), Positives = 90/161 (55%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A QL+ + E+ D ++K A + + V+ K D+++ DT+GR Sbjct: 140 RPGAYHQLKQLLDPYHIEVFGDPNEK-DAVKLAKEGVEYFKTRDVDLIIVDTAGRHKEEK 198 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L+EE+ ++I++ + P+E++LV+DGT G QA F + I I+TKLD + Sbjct: 199 DLIEEM----RMISEEI--RPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSS 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V G P+KF+GVGE ++DL+PFD FV + Sbjct: 253 AKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRL 293
>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 541 Score = 94.7 bits (234), Expect = 2e-19 Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 5/166 (3%) Frame = -3 Query: 587 RAAARDQLEIWAERT-----GSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGR 423 RA A DQL+ A R GS D K A+ + + + K+E FDI++ DTSGR Sbjct: 149 RAGAFDQLKQNAIRARIPFYGSYTETDPAKVAE------EGINKFKKEKFDIIIVDTSGR 202 Query: 422 LHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILT 243 H L +E++ VI PN+ ++VLD + G QQ+K F + ILT Sbjct: 203 HHQEEELFQEMIEISNVIK------PNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILT 256 Query: 242 KLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 K+DG ARGG +S V P+ F+G GE + DL+ F ++F+ + Sbjct: 257 KMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKL 302
>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 93.6 bits (231), Expect = 5e-19 Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RAAA QL+I +++ + + + Q P ++ +A++ K + +D++L DT+GRLH N Sbjct: 141 RAAAIKQLQILSDQVKIDFYLSDT--TQTPINITKEAIEHAKLKLYDLLLIDTAGRLHIN 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 +M E+ + + + P E LL++D G + + AK+F+ + I+G ++TK D Sbjct: 199 TEMMNEINTIQNI------SKPIETLLIVDSMMGQDAINIAKKFSASLSISGIVITKTDS 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 AR G +S+ G P+KF+G GE + L+PF E + I Sbjct: 253 DARSGVALSIRHITGKPIKFIGTGEKLHQLEPFHPERIADRI 294
>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 93.6 bits (231), Expect = 5e-19 Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = -3 Query: 593 PSRAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVK--RGKREGFDIVLCDTSGRL 420 P R AA +QL AE + +++ A + AVK ++ D+V+ DT+GR Sbjct: 139 PYRPAAGEQLRQLAEEVDVPVHVEDVDDA-----VEMAVKGVEALKDECDVVIVDTAGRD 193 Query: 419 HTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTK 240 + L++EL + I P+E+LLVLD T G A+ F++ V +TG ++TK Sbjct: 194 RLSEDLIDELREMAERIE------PHEVLLVLDATVGQKAGDHAEAFHEAVQLTGVVITK 247 Query: 239 LDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 LD A+GG +S V G P+KFVG GE V+DL+ F+ +FV Sbjct: 248 LDTAAKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFV 289
>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)| Length = 455 Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 2/163 (1%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKR--EGFDIVLCDTSGRLHT 414 R AA +QL+ AE ++ D +K + +K G + + + DTSGR Sbjct: 137 RYAAYEQLQQIAESVNAKFYGDPKEKDPV-----KIIKNGLEVLKDAQVKIIDTSGRDSL 191 Query: 413 NYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLD 234 + L+EE+ K+ + P+++L+V+D T G ++K ND VG+TG I+TK+D Sbjct: 192 DSDLIEEIRRIKEAVK------PDQVLMVIDATMGQQAGPESKAINDAVGVTGIIITKMD 245 Query: 233 GTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 GTA+GG +S V ++ +P+ F+G GE ++D++ FD + F+ + Sbjct: 246 GTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRL 288
>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 92.8 bits (229), Expect = 8e-19 Identities = 51/119 (42%), Positives = 68/119 (57%) Frame = -3 Query: 461 EGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKE 282 E +DI + DT+GR L+EE+ V P+ +VLD G QQA Sbjct: 176 EKYDIKIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGIGQQASQQAHA 229 Query: 281 FNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 FND VGITG I+TKLDGTA+GG +S V E P+ F+GVGE ED + F+A+ F+ + Sbjct: 230 FNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRL 288
>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)| Length = 440 Score = 92.4 bits (228), Expect = 1e-18 Identities = 51/119 (42%), Positives = 68/119 (57%) Frame = -3 Query: 461 EGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKE 282 E +DI + DT+GR L+EE+ V P+ +VLD G QQA Sbjct: 176 EKYDIRIVDTAGRHALEADLIEEMERIHAV------AKPDHKFMVLDAGIGQQASQQAHA 229 Query: 281 FNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 FND VGITG I+TKLDGTA+GG +S V E P+ F+GVGE ED + F+A+ F+ + Sbjct: 230 FNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRL 288
>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 88.2 bits (217), Expect(2) = 1e-18 Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 2/163 (1%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEI--VIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHT 414 R AA++QL I A + ++ +K ++ +A+ + +D+V+ DT+GR+ Sbjct: 142 RPAAQEQLAIIANSVNIDSLPIVKGEKPLD---IVKRAIGEAQISAYDVVIYDTAGRIQI 198 Query: 413 NYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLD 234 + +MEE ++ KK++ P E LLV+D TG + + AK F++ + I+G IL+++D Sbjct: 199 DNVMMEEALAIKKILN------PTETLLVIDSMTGQDAVITAKTFSEKLEISGLILSRID 252 Query: 233 GTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 G +GG +SV P+KF+ GE + DL+ F+AE I Sbjct: 253 GDTKGGAALSVKYFTQKPIKFLSSGEKLTDLEEFNAERLASRI 295 Score = 24.6 bits (52), Expect(2) = 1e-18 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -2 Query: 675 GKTTLG*ENLPHRFKNEGAKVLMAAGDTFKSSS 577 GKTT L R KN+ KVL+ + DT++ ++ Sbjct: 114 GKTTAS-GKLALRLKNQNKKVLLVSLDTYRPAA 145
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 92.0 bits (227), Expect = 1e-18 Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVIPS----RAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T T L ++ W+ + RA A DQL+ T + + Sbjct: 109 QGSGKTTTCTKLAYHYQKKGWKTCLVCADTFRAGAFDQLK--QNATKARVPFYGSYTEMD 166 Query: 500 PSVLSQ-AVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P V++Q V++ K + F++++ DTSGR L EE++ + I P+ I+ V+ Sbjct: 167 PVVIAQEGVEKFKEDSFEVIIVDTSGRHKQEESLFEEMLQVSQAID------PDNIIFVM 220 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 DGT G QA+ F + V + I+TKLDG A+GG +S V P+ F+G GE +++ Sbjct: 221 DGTIGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDE 280 Query: 143 LQPFDAEAFVEAI 105 ++PF + FV + Sbjct: 281 MEPFKTKPFVSKL 293
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.9 bits (224), Expect = 3e-18 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVI----PSRAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T + L +R W+ + RA A DQL+ T + I Sbjct: 110 QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMD 167 Query: 500 PSVL-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P ++ S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+ Sbjct: 168 PVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQ------PDNIVYVM 221 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 D + G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D Sbjct: 222 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 281 Query: 143 LQPFDAEAFVEAI 105 +PF + F+ + Sbjct: 282 FEPFKTQPFISKL 294
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.5 bits (223), Expect = 4e-18 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVL-SQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T + I P ++ S+ V++ K E F+I++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQE 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE++ I P+ I+ V+D + G QAK F D V + I+TKLDG Sbjct: 199 DSLFEEMLQVSNAIQ------PDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V P+ F+G GE ++D +PF + F+ + Sbjct: 253 HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKL 294
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.5 bits (223), Expect = 4e-18 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVI----PSRAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T + L +R W+ + RA A DQL+ T + I Sbjct: 110 QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMD 167 Query: 500 PSVL-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P ++ S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+ Sbjct: 168 PVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVM 221 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 D + G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D Sbjct: 222 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 281 Query: 143 LQPFDAEAFVEAI 105 +PF + F+ + Sbjct: 282 FEPFKTQPFISKL 294
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.5 bits (223), Expect = 4e-18 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVI----PSRAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T + L +R W+ + RA A DQL+ T + I Sbjct: 110 QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMD 167 Query: 500 PSVL-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P ++ S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+ Sbjct: 168 PVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVM 221 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 D + G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D Sbjct: 222 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 281 Query: 143 LQPFDAEAFVEAI 105 +PF + F+ + Sbjct: 282 FEPFKTQPFISKL 294
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.5 bits (223), Expect = 4e-18 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVI----PSRAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T + L +R W+ + RA A DQL+ T + I Sbjct: 110 QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMD 167 Query: 500 PSVL-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P ++ S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+ Sbjct: 168 PVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVM 221 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 D + G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D Sbjct: 222 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 281 Query: 143 LQPFDAEAFVEAI 105 +PF + F+ + Sbjct: 282 FEPFKTQPFISKL 294
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 90.5 bits (223), Expect = 4e-18 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVI----PSRAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T + L +R W+ + RA A DQL+ T + I Sbjct: 110 QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLK--QNATKARIPFYGSYTEMD 167 Query: 500 PSVL-SQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 P ++ S+ V++ K E F+I++ DTSGR L EE++ I P+ I+ V+ Sbjct: 168 PVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVM 221 Query: 323 DGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 D + G QAK F D V + I+TKLDG A+GG +S V P+ F+G GE ++D Sbjct: 222 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 281 Query: 143 LQPFDAEAFVEAI 105 +PF + F+ + Sbjct: 282 FEPFKTQPFISKL 294
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 90.5 bits (223), Expect = 4e-18 Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP------SVLSQAVKRGKREGFDIVLCDTSG 426 R AA +QL++ ER G + + + +V + + + + FD+V+ DT+G Sbjct: 140 RPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAKHFDVVIVDTAG 199 Query: 425 RLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFIL 246 RL G+ EEL++ I A+ P+E+L VLD G + + A F + VG TG L Sbjct: 200 RL----GIDEELMAQAAAIRDAIN--PDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVAL 253 Query: 245 TKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 TKLDG ARGG +SV + G+P+ F GE +ED F + I Sbjct: 254 TKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 90.5 bits (223), Expect = 4e-18 Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP------SVLSQAVKRGKREGFDIVLCDTSG 426 R AA +QL++ ER G + + + +V + + + + FD+V+ DT+G Sbjct: 140 RPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAKHFDVVIVDTAG 199 Query: 425 RLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFIL 246 RL G+ EEL++ I A+ P+E+L VLD G + + A F + VG TG L Sbjct: 200 RL----GIDEELMAQAAAIRDAIN--PDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVAL 253 Query: 245 TKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 TKLDG ARGG +SV + G+P+ F GE +ED F + I Sbjct: 254 TKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 89.0 bits (219), Expect = 1e-17 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDN-----DKKAQAP-SVLSQAVKRGKREGFDIVLCDTSG 426 R AA +QL++ ER G + + D P +V S + + + FD+V+ DT+G Sbjct: 140 RPAAVNQLQVVGERAGVPVFAPHPGASPDSGPGDPVAVASAGLVEARAKHFDVVIVDTAG 199 Query: 425 RLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFIL 246 RL G+ +EL++ I +A+ P+E+L VLD G + + A F VG TG +L Sbjct: 200 RL----GIDDELMAQAGAIREAIN--PDEVLFVLDAMIGQDAVTTAAAFGAGVGFTGVVL 253 Query: 245 TKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 TKLDG ARGG +SV + G+P+ F GE ++D F + I Sbjct: 254 TKLDGDARGGAALSVREVTGVPILFATTGEKLDDFDVFHPDRMASRI 300
>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 87.4 bits (215), Expect = 4e-17 Identities = 54/161 (33%), Positives = 85/161 (52%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA DQL AE+ G + D K A + + V+ K D+++ DT+GR Sbjct: 139 RPAAFDQLRQLAEKIGVPFYGERDGK-DAVEIAKRGVQNFKN--MDVIIVDTAGRHRNEE 195 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L++E+ + ++ P+E++LV+D T G QA+ F + I I+TK+D T Sbjct: 196 ALLKEVRAIYDAVS------PDEVVLVIDATVGKMAAAQAEAFMKYLPIHSVIITKMDST 249 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG ++ V + G VKF+GVGE V++ + F FV + Sbjct: 250 ARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVARV 290
>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)| Length = 451 Score = 84.3 bits (207), Expect = 3e-16 Identities = 53/161 (32%), Positives = 87/161 (54%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R AA +QL+ ++ G + + +K A + + V++ E +I++ DT+GR Y Sbjct: 138 RPAALEQLQQLGQQIGVPVYGEPGEK-DAVGIAKRGVEKFLSEKMEIIIVDTAGR--HGY 194 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 G L+ K I +A+ P+E+ LV+D + G A +FN I I+TK+DGT Sbjct: 195 GEEAALLEEMKNIYEAIK--PDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGT 252 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V G +KF+G GE +++L+ F+ FV I Sbjct: 253 AKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARI 293
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 84.0 bits (206), Expect = 4e-16 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T S+I P + + V R K+E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQ 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + I++A P+ ++ V+D + G +QA+ F V + I+TK+DG Sbjct: 199 ASLFEEM----RQISEATK--PDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FDA+ FV + Sbjct: 253 HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRL 294
>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)| Length = 465 Score = 81.3 bits (199), Expect = 3e-15 Identities = 49/161 (30%), Positives = 86/161 (53%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A DQ + ER +E+ D P +++ + D+ + DT+GR Sbjct: 137 RPGAYDQAKQMCER--AEVDFYGDPDCDDPVQIAREGLEATEDA-DVHIVDTAGRHALED 193 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 L++E+ + V+ P+ LLVLD G +QA++F++ +GI G ++TKLDGT Sbjct: 194 DLIDEIEEIEGVVQ------PDLNLLVLDAAIGQGAKEQAQQFDESIGIGGVVITKLDGT 247 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG ++ V+E + F+G+GE V+D++ F+ F+ + Sbjct: 248 AKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRL 288
>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 536 Score = 80.9 bits (198), Expect = 3e-15 Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P +V ++ V + K+E F+I++ DTSGR Sbjct: 143 RAGAFDQLK--QNATKAKIPFFGSYTETDPVAVAAEGVAKFKKEKFEIIIVDTSGRHRQE 200 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L E+V + P+ ++VLD + G Q++ F D ILTK+DG Sbjct: 201 SELFTEMVDIGAAVK------PDSTIMVLDASIGQAAEPQSRAFKDASDFGSIILTKMDG 254 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V P+ F+G GE + DL+ F + F+ + Sbjct: 255 HAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKL 296
>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)| Length = 445 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEI---VIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLH 417 R AA DQL + G +I V A + + V++ E +DI++ DT+GR Sbjct: 135 RPAAYDQLV----QIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGR-- 188 Query: 416 TNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKL 237 +G EE+ +++ P+E++LV+D + G A F+ I I+TK+ Sbjct: 189 --HGYGEEVKLLEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKM 246 Query: 236 DGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 DGTA+GG +S V G +KF+G GE +++L+ F+ FV I Sbjct: 247 DGTAKGGGALSAVAATGAAIKFIGTGEKLDELEVFNPRRFVSRI 290
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 80.1 bits (196), Expect = 6e-15 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + + V R K+E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQA 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+D + G +QA+ F + V + I+TK+DG Sbjct: 199 ASLFEEM----RQVAEATE--PDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FD + FV + Sbjct: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 79.7 bits (195), Expect = 7e-15 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + + ++R ++E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSGRHKQE 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+DG+ G QA+ F + I+TKLDG Sbjct: 199 AALFEEM----RQVAEATK--PDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FD + FV + Sbjct: 253 HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRL 294
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 79.7 bits (195), Expect = 7e-15 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + + ++R ++E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSGRHKQE 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+DG+ G QA+ F + I+TKLDG Sbjct: 199 AALFEEM----RQVAEATK--PDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FD + FV + Sbjct: 253 HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRL 294
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 79.7 bits (195), Expect = 7e-15 Identities = 43/127 (33%), Positives = 67/127 (52%) Frame = -3 Query: 485 QAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGL 306 + V++ K+E FDI++ DTSGR L E+V + + P + ++V+DG+ G Sbjct: 191 EGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQ------PTQTIMVMDGSIGQ 244 Query: 305 NMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDA 126 QA+ F + ILTK+DG A+GG +S V P+ F+G GE V DL+ F Sbjct: 245 AAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVGDLEIFKP 304 Query: 125 EAFVEAI 105 F+ + Sbjct: 305 TTFISKL 311
>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 522 Score = 79.0 bits (193), Expect = 1e-14 Identities = 40/130 (30%), Positives = 66/130 (50%) Frame = -3 Query: 494 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 315 + + V + K + FD+++ DTSGR L E+V I P++ +++LD + Sbjct: 171 IAKEGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIR------PDQTIMILDAS 224 Query: 314 TGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQP 135 G Q+K F + I+TKLDG A+GG +S V P+ F+G GE + DL+ Sbjct: 225 IGQAAESQSKAFKETADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLER 284 Query: 134 FDAEAFVEAI 105 F +F+ + Sbjct: 285 FSPRSFISKL 294
>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 79.0 bits (193), Expect = 1e-14 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R AA DQL + G ++ + Q P + + V + DI++ DT+GR Sbjct: 136 RPAAYDQLLQLGNQIGVQVY--GEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGR--HG 191 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 YG +L+ K + L P++++LV+D + G A F+ I I+TK+DG Sbjct: 192 YGEETKLLEEMKEMYDVLK--PDDVILVIDASIGQKAYDLASRFHQASPIGSVIITKMDG 249 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 TA+GG +S V G +KF+G GE +++L+ F+A+ FV I Sbjct: 250 TAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRI 291
>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)| Length = 460 Score = 77.8 bits (190), Expect = 3e-14 Identities = 41/116 (35%), Positives = 68/116 (58%) Frame = -3 Query: 452 DIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFND 273 D+ + DT+GR L+ E+ + V+ P+ LLVLD G QQA++F+ Sbjct: 179 DVHIVDTAGRHALEDDLIAEIEEIEGVVE------PDRSLLVLDAAIGQGAKQQARQFDA 232 Query: 272 VVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 +GI G +TKLDGTA+GG ++ V+E + F+G GE V+D++ F+ ++F+ + Sbjct: 233 SIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRL 288
>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)| Length = 441 Score = 77.4 bits (189), Expect = 4e-14 Identities = 50/161 (31%), Positives = 83/161 (51%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A +QL+ AE G+ + +++ + + ++ G +IV+ DT+GR + Sbjct: 136 RPGAYEQLKRLAEEAGA--MFYGEREGDPAEIARRGLEDLLSRGAEIVIVDTAGR----H 189 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 G EE ++ A A P+E+ LV+D + G + A+ F+ I I+TK+DGT Sbjct: 190 GHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSIIVTKMDGT 249 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 ARGG ++ G +KF+G GE + +L+PF FV I Sbjct: 250 ARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARI 290
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 77.0 bits (188), Expect = 5e-14 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 1/159 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + + +++ ++E D+++ DTSGR Sbjct: 140 RAGAFDQLK--QNATKAKIPFYGSYMESDPVKIAVEGLEKFRQEKSDLIIIDTSGRHMQE 197 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+DG+ G QA+ F + I+TKLDG Sbjct: 198 AALFEEM----RQVAEATK--PDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDG 251 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 114 A+GG +S V PV F+G GE ++D F+ E FV Sbjct: 252 HAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFV 290
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 77.0 bits (188), Expect = 5e-14 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + + V K+E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQE 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+D + G QA+ F V + I+TK+DG Sbjct: 199 ASLFEEM----RQVAEATK--PDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FD + FV + Sbjct: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 76.6 bits (187), Expect = 6e-14 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAP-SVLSQAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P + V+ K+E D+++ DTSGR Sbjct: 141 RAGAFDQLK--QNATKAKIPFYGSYTESDPVKIAVDGVETFKKENCDLIIVDTSGRHKQE 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L EE+ + +A+A P+ ++ V+D + G QA+ F V + I+TK+DG Sbjct: 199 AALFEEM----RQVAEATK--PDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDG 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A+GG +S V PV F+G GE +++ + FD + FV + Sbjct: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 76.6 bits (187), Expect = 6e-14 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 4/192 (2%) Frame = -3 Query: 668 QPSARKTCPTDLRMKERRY*WQQVIPS----RAAARDQLEIWAERTGSEIVIDNDKKAQA 501 Q S + T T ++ W+ + RA A DQL+ A + + ++ Sbjct: 110 QGSGKTTTCTKYAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDP 169 Query: 500 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 321 + V+ K+E D+++ DTSGR L EE+ + +++A P+ ++ V+D Sbjct: 170 VKIAVDGVETFKKENCDLIIVDTSGRHKQEAALFEEM----RQVSEAQK--PDLVIFVMD 223 Query: 320 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDL 141 + G QA+ F V + I+TK+DG A+GG +S V PV F+G GE +++ Sbjct: 224 SSIGQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEF 283 Query: 140 QPFDAEAFVEAI 105 + FD + FV + Sbjct: 284 EVFDVKPFVSRL 295
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 76.3 bits (186), Expect = 8e-14 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLS-QAVKRGKREGFDIVLCDTSGRLHTN 411 RA A DQL+ T ++I P++++ + V + K+E F+I++ DTSGR Sbjct: 142 RAGAFDQLK--QNATKAKIPYYGSLTQTDPAIVAAEGVAKFKKERFEIIIVDTSGRHKQE 199 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 L E+ + + P++ +LVLD T G Q+ F I+TK DG Sbjct: 200 EELFTEMTQIQTAVT------PDQTILVLDSTIGQAAEAQSSAFKATADFGAIIITKTDG 253 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVEAI 105 A GG +S V P+ ++G GE + DL+ F+ +AF++ + Sbjct: 254 HAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKL 295
>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 74.3 bits (181), Expect = 3e-13 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 1/153 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPS-VLSQAVKRGKREGFDIVLCDTSGRLHTN 411 R AA QL++ +++ N+ Q+P ++ A++ K + +D++L DT+GRL + Sbjct: 141 RLAAIKQLKMLSKQAKISFFPSNN--TQSPKDIVQHAIQHAKLKFYDVLLIDTAGRLQID 198 Query: 410 YGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDG 231 +M EL+ + P E V D G + + EFN + ++ FI+TK D Sbjct: 199 KKMMNELLDVYNI------SHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDS 252 Query: 230 TARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 132 R G ++S+ P+KF+G GE +E+L+ F Sbjct: 253 DTRAGIILSIKYLTKKPIKFIGTGEKLEELELF 285
>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 621 Score = 73.9 bits (180), Expect = 4e-13 Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 5/135 (3%) Frame = -3 Query: 494 VLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGT 315 + QA+K + + FDIVL DT+GR H + LM L S A P++I++V + Sbjct: 491 IAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSF------ADQAKPDKIIMVGEAL 544 Query: 314 TGLNMLQQAKEFNDVVG----ITGFILTKLDGTARG-GCVVSVVDELGIPVKFVGVGEGV 150 G + +QQAK FND G + FI++K D G +V++V GIP+ FVGVG+ Sbjct: 545 VGTDSVQQAKNFNDAFGKGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPILFVGVGQTY 604 Query: 149 EDLQPFDAEAFVEAI 105 DL+ + V + Sbjct: 605 TDLRTLSVKWAVNTL 619
>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)| Length = 444 Score = 72.0 bits (175), Expect = 2e-12 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 4/134 (2%) Frame = -3 Query: 494 VLSQAVKRGKREGFDIVLCDTSGRLHTNYG----LMEELVSCKKVIAKALPGAPNEILLV 327 + + +++ +E +IV+ DT+GR YG L+EE+ S I P+E++LV Sbjct: 165 IATNGLEKFLKEKMNIVIIDTAGR--HGYGEEASLLEEMKSMYDKIH------PDEVILV 216 Query: 326 LDGTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVE 147 +D + G A F+ I I++K+DGTA+GG +S V G +KF+G GE ++ Sbjct: 217 IDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALSAVIATGAQIKFIGTGEKLD 276 Query: 146 DLQPFDAEAFVEAI 105 +L+ F+ FV + Sbjct: 277 ELEVFNPRRFVSRL 290
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Frame = -3 Query: 503 APSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 A + +A+ + +GFD+VL DT+GR+ N LM L V P+ +L V Sbjct: 496 AAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NTPDLVLFVG 549 Query: 323 DGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSVVDELGIPV 177 + G + Q +FN + I G +LTK D + G +S+ P+ Sbjct: 550 EALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPI 609 Query: 176 KFVGVGEGVEDLQPFDAEAFVEAI 105 FVG G+ DL+ +A+A V A+ Sbjct: 610 VFVGTGQTYCDLRSLNAKAVVAAL 633
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Frame = -3 Query: 503 APSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 A + +A+ + +GFD+VL DT+GR+ N LM L V P+ +L V Sbjct: 498 AAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NTPDLVLFVG 551 Query: 323 DGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSVVDELGIPV 177 + G + Q +FN + I G +LTK D + G +S+ P+ Sbjct: 552 EALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPI 611 Query: 176 KFVGVGEGVEDLQPFDAEAFVEAI 105 FVG G+ DL+ +A+A V A+ Sbjct: 612 VFVGTGQTYCDLRSLNAKAVVAAL 635
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Frame = -3 Query: 503 APSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 A + +A+ + +GFD+VL DT+GR+ N LM L V P+ +L V Sbjct: 498 AAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITV------NTPDLVLFVG 551 Query: 323 DGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSVVDELGIPV 177 + G + Q +FN + I G +LTK D + G +S+ P+ Sbjct: 552 EALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPI 611 Query: 176 KFVGVGEGVEDLQPFDAEAFVEAI 105 FVG G+ DL+ +A+A V A+ Sbjct: 612 VFVGTGQTYCDLRSLNAKAVVAAL 635
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) (GTP-binding protein) Length = 614 Score = 54.3 bits (129), Expect = 3e-07 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 11/144 (7%) Frame = -3 Query: 503 APSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVL 324 A + +A+K D+VL DT+GR+ N LM L KV P+ +L V Sbjct: 475 AAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKV------NNPDLVLFVG 528 Query: 323 DGTTGLNMLQQAKEFNDVVG----------ITGFILTKLDG-TARGGCVVSVVDELGIPV 177 + G + Q +FN + I G +LTK D + G +S+ G P+ Sbjct: 529 EALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPI 588 Query: 176 KFVGVGEGVEDLQPFDAEAFVEAI 105 FVG G+ DL+ + A V ++ Sbjct: 589 VFVGTGQTYADLKAINVNAVVNSL 612
>FLHF_HELPJ (Q9ZM34) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 455 Score = 41.6 bits (96), Expect = 0.002 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A +QL +A + I D K A + + E D +L DT+G H+ Y Sbjct: 295 RIGALEQLSWYANKMKMSIEAVIDAKDFAKEIEAL-------EYCDFILVDTTG--HSQY 345 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 E++ K+ I G ++ LVL TT ++ + V+GI I TKLD + Sbjct: 346 D-KEKIAGLKEFIDG---GYNIDVSLVLSVTTKYEDMKDIYDSFGVLGIDTLIFTKLDES 401 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVE-DLQPFDAEAFVEAI 105 G + S+V E P+ ++ VG+ V DL+ E V+ + Sbjct: 402 RGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCM 443
>FLHF_HELPY (O25679) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 459 Score = 41.6 bits (96), Expect = 0.002 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 1/162 (0%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A +QL +A + I D K A + + E D +L DT+G H+ Y Sbjct: 299 RIGALEQLSWYANKMKMSIEAVIDAKDFAKEIEAL-------EYCDFILVDTTG--HSQY 349 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 E++ K+ I G ++ LVL TT ++ + V+GI I TKLD + Sbjct: 350 D-KEKIAGLKEFIDG---GYNIDVSLVLSVTTKYEDMKDIYDSFGVLGIDTLIFTKLDES 405 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVE-DLQPFDAEAFVEAI 105 G + S+V E P+ ++ VG+ V DL+ E V+ + Sbjct: 406 RGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCM 447
>FLHF_BACSU (Q01960) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 366 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 4/165 (2%) Frame = -3 Query: 587 RAAARDQLEIWAE--RTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHT 414 R AA +QL+ +AE + E+ ++ QA + S+ +D V DT+GR Sbjct: 216 RIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKELFSE---------YDHVFVDTAGRNFK 266 Query: 413 NYGLMEELVSCKKVIAKALPGAPN-EILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKL 237 + ++EL + +P + + LVL T ++ + V + +I TK+ Sbjct: 267 DPQYIDEL-------KETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQYIFTKI 319 Query: 236 DGTARGGCVVSVVDELGIPVKFVGVGEGV-EDLQPFDAEAFVEAI 105 D T G V +++ E I V F+ G+ V ED+Q FV + Sbjct: 320 DETTSLGSVFNILAESKIGVGFMTNGQNVPEDIQTVSPLGFVRML 364
>FLHF_CAMJE (O52908) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 484 Score = 38.9 bits (89), Expect = 0.014 Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%) Frame = -3 Query: 500 PSVLSQAVKRGKREGFDIVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLD 321 P L +A+K +++L DT G + +L K+ + + A ++ LV+ Sbjct: 348 PKDLDEAIK--SLNNCEVILVDTIGNSQYD---QSKLAKTKEFLMHS--NAEIDVNLVVS 400 Query: 320 GTTGLNMLQQAKEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGV-ED 144 T L + + + I I+TK D T G + S+V E IP+ F +G+ V +D Sbjct: 401 ANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSFFSIGQEVPDD 460 Query: 143 LQPFDAEAFVEAI 105 L+ +++ V I Sbjct: 461 LEVANSDFLVHCI 473
>FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 373 Score = 38.1 bits (87), Expect = 0.025 Identities = 37/148 (25%), Positives = 68/148 (45%) Frame = -3 Query: 587 RAAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTNY 408 R A +QL+ +AE ++ K A +P + ++ + + D++L DT+GR H + Sbjct: 212 RVGAFEQLKAFAE-----VLEVPFKLADSPRAFN--IQLLEMDDRDVILVDTAGRSHYDV 264 Query: 407 GLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDVVGITGFILTKLDGT 228 ++EL + KV + + L L ++ +A + I+G I TKLD T Sbjct: 265 IRLKELETYFKV-------SDISVYLTLAANLSELVMYEAIMQFGMFSISGLIFTKLDET 317 Query: 227 ARGGCVVSVVDELGIPVKFVGVGEGVED 144 G +V+V PV +G+ + + Sbjct: 318 PYPGSMVNVAYRTQYPVVCFTMGQSIPE 345
>FLHF_PSEPU (O52256) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 437 Score = 35.8 bits (81), Expect = 0.12 Identities = 32/102 (31%), Positives = 48/102 (47%) Frame = -3 Query: 449 IVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAKEFNDV 270 +VL DT+G ++ L +L + A G + LVL T+ +L A Sbjct: 299 VVLIDTAGLQASDPALRMQLETL------AGRGIAAKNYLVLATTSQKQVLTAAYHSYKR 352 Query: 269 VGITGFILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVED 144 G+ G ILTKLD TA G V+S+ +PV ++ G + D Sbjct: 353 CGLAGCILTKLDETASLGDVLSLAISHELPVAYLTDGPRIPD 394
>JHD3C_HUMAN (Q9H3R0) JmjC domain-containing histone demethylation protein 3C| (EC 1.14.11.-) (Jumonji domain-containing protein 2C) (Gene amplified in squamous cell carcinoma 1 protein) (GASC-1 protein) Length = 1056 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -2 Query: 276 RCCWNHRIHSD----EARRHCSWWLCGERRRRTWNSSQVCWCRRRGG 148 +CC R+H+ + C WLC +R W +++ C C RGG Sbjct: 720 KCCV--RVHASCYGIPSHEICDGWLCARCKRNAW-TAECCLCNLRGG 763
>ENGA_AQUAE (O67749) GTP-binding protein engA| Length = 433 Score = 32.0 bits (71), Expect = 1.8 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%) Frame = -3 Query: 458 GFDIVLCDTSGRL-HTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQ--A 288 G + ++ DT G + T L+ E+ KKV+ + +P A + IL V+DG GLN L Q A Sbjct: 49 GKEFIIVDTGGLVPETKDELIREV---KKVVEQEIPKA-DVILFVVDGKEGLNPLDQEIA 104 Query: 287 KEFNDVVGITGFILTKLDGTARGGCVVSVVDELGIPVKF-------VGVGEGVEDLQPFD 129 K ++ K+D + V LG F GVGE ++++ + Sbjct: 105 KYLYPYADKVLLVVNKIDNLRQEKNVAEFY-TLGFEKIFPISAQHGKGVGELLDEVVKYL 163 Query: 128 AEAFVEAI 105 E VE + Sbjct: 164 KEEKVETV 171
>URAA_PASMU (Q9CPL9) Probable uracil permease (Uracil transporter)| Length = 417 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -3 Query: 272 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVGE 156 VVG++ I K+D T AR C++SVV GI FV GE Sbjct: 346 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGGMFVNFGE 385
>JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylation protein 3C| (EC 1.14.11.-) (Jumonji domain-containing protein 2C) Length = 1054 Score = 30.8 bits (68), Expect = 3.9 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -2 Query: 228 CSWWLCGERRRRTWNSSQVCWCRRRGG 148 C WLC +R W +++ C C RGG Sbjct: 736 CDGWLCARCKRNAW-TAECCLCNLRGG 761
>URAA_HAEIN (P45117) Probable uracil permease (Uracil transporter)| Length = 414 Score = 30.4 bits (67), Expect = 5.1 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -3 Query: 272 VVGITGFILTKLDGT-ARGGCVVSVVDELGIPVKFVGVG 159 VVG++ I K+D T AR C++SVV GI FV VG Sbjct: 347 VVGMSTLIRGKVDVTEARNLCIISVVMTFGIGNMFVDVG 385
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 30.0 bits (66), Expect = 6.7 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = +1 Query: 334 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 480 K S+G AM FLQE NS + FV P+ + ++PS F RFT Sbjct: 78 KCSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124
>ISPG_XYLFA (Q9PAE3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 417 Score = 30.0 bits (66), Expect = 6.7 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -3 Query: 584 AAARDQLEIWAERTGSEIVIDNDKKAQAPSVLSQAVKRGKREGFDIVLCDTSGRLHTN-Y 408 A+ + E+W R GSE+V AQ+ + + + +R G D+ L G H N + Sbjct: 49 ASTKQVAELW--RAGSEMVRLTVNNAQSAAAIPRIAERLAMMGIDVPLI---GDFHYNGH 103 Query: 407 GLMEELVSCKKVIAK 363 L+ + +C +V+AK Sbjct: 104 QLLADEPACAEVLAK 118
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = +1 Query: 334 KISLGAPGRALAMTFLQETNSSIRP*FV*SRPDVSHRTISNPSRFPRFT 480 K S+G AM FLQE NS + FV P+ + ++PS F RFT Sbjct: 78 KSSIGKNRAQAAMEFLQELNSDVSGSFVEESPE--NLLDNDPSFFCRFT 124
>VK04_VACCC (P20537) Protein K4| Length = 424 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = +3 Query: 60 LVT*ETLITGSNLWENGFNKCLCIKRLEIF--------HPFADTNKLDWNSKFVYDAHHT 215 +VT +T G++ W + C + I D DWNSK+ Y+ + T Sbjct: 329 MVTDKTAYIGTSNWTGNYFTDTCGASINITPDDGLGLRQQLEDIFMRDWNSKYSYELYDT 388 Query: 216 ATTSSAV*LRQNESCDSN 269 + T L+ + C ++ Sbjct: 389 SPTKRCKLLKNMKQCTND 406
>GATD_ECOLI (P0A9S3) Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)| Length = 346 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 164 VGEGVEDLQPFDAEAFVEAIFP*I*PCY*CFSCNK 60 VG GV+DL P DA A V + PC+ C C K Sbjct: 68 VGSGVDDLHPGDAVACVPLL-----PCFTCPECLK 97
>GATD_ECO57 (P0A9S4) Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)| Length = 346 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 164 VGEGVEDLQPFDAEAFVEAIFP*I*PCY*CFSCNK 60 VG GV+DL P DA A V + PC+ C C K Sbjct: 68 VGSGVDDLHPGDAVACVPLL-----PCFTCPECLK 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,501,862 Number of Sequences: 219361 Number of extensions: 1889467 Number of successful extensions: 5584 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 5367 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5503 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
